NO20G01920, NO20G01920 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO20G01920 vs. NCBI_GenBank
Match: EWM22051.1 (der1-like domain member 1 [Nannochloropsis gaditana]) HSP 1 Score: 489.2 bits (1258), Expect = 1.200e-134 Identity = 253/390 (64.87%), Postives = 299/390 (76.67%), Query Frame = 0 Query: 1 MRQRGTEV--SRRPWSILMLLLVMSGLQCLGVEAVQPPQRKLGIVQ------PHLKRLGTKDSLPSPALVLSRRRDLAIRSSSRGEGADSPSRWLTRVRGGVQPAKSKSKVKATAPTATGNKIRYAGEAGTKQKVKEWYKATPIITRVQLSTSLLLTALGLVAIDPSYFLLDPVKIVTGLQLWRPFTAAAFMGPPSMSWVSNLYFLHQYGTALENSEGAAQQLVFLLFNIAVLSFLGSLIGLPVTSNALITAALHCLGRQDPLRDVNWMFAIKIKYWMLPFCLALVDMLQAQNPMAALPAALGILSGHLYYFLRNVWPQMGHRELLLAPEWWCKLLNRNNDDIIFRRDKRPLV--GADGSAGGTGSGGSLTSILPKKKKSKIYKMKKTSS 381 M Q G + +R W++L++LL + LQ +EA Q P KL + + KRL + S V + + G +P RWL R RGGVQPA+ KSKVKA P A GNKIRYA EA TKQKVKEWY+ATP++TR+ L+ SL+LT LG++ +DP+YFLLDPV+ +T Q+WRPFTAAAF+GPPSMSWVSNLYFLHQYGTALE S+G AQQLVFLLFNI VLS LGSL+GLP+TSNALITAALHCLGRQDPLRDVNWMF+IKIKYWMLPFCLALVDMLQAQNP+AALPAALGILSGH+YYFLR VWP+MGHRELLLAPEW CK+LNR+NDD+IF+R +PLV GA S G +G +L+S+L KKKSK+YKMKKT S Sbjct: 1 MWQEGAQAGKARWLWTLLLILLTTTSLQSTRLEAPQQPPSKLSLKRRSPCRSEATKRLKNRSYASSCGYVFDSHQSFG--PPGKNGGQTNPVRWLARARGGVQPAQKKSKVKANGPAAQGNKIRYAKEASTKQKVKEWYQATPLVTRLHLTASLVLTGLGIIILDPAYFLLDPVRTITKAQIWRPFTAAAFLGPPSMSWVSNLYFLHQYGTALEKSQGTAQQLVFLLFNIGVLSVLGSLMGLPITSNALITAALHCLGRQDPLRDVNWMFSIKIKYWMLPFCLALVDMLQAQNPLAALPAALGILSGHMYYFLRQVWPKMGHRELLLAPEWLCKVLNRHNDDVIFQRRNKPLVTTGASSSEGESGVLPNLSSVL--KKKSKVYKMKKTPS 386
BLAST of NO20G01920 vs. NCBI_GenBank
Match: GAX20587.1 (hypothetical protein FisN_3Hu563 [Fistulifera solaris]) HSP 1 Score: 178.7 bits (452), Expect = 3.400e-41 Identity = 95/218 (43.58%), Postives = 140/218 (64.22%), Query Frame = 0 Query: 121 AGTKQKVKEWYKATPIITRVQLSTSLLLTALGLV---AIDPSYFLLDPVKIVTGLQLWRPFTAAAFMGPPSMSWVSNLYFLHQYGTALENSEGAAQQLVFLLFNIAVLSFLGSLIGLPVTSNALITAALHCLGRQDPLRDVNWMFAIKIKYWMLPFCLALVDMLQAQNPMAALPAALGILSGHLYYFLRNVWPQMGH-RELLLAPEWWCKLLNRNNDD 335 A T QK YK +TR+ ++ + T LGLV + LDP++++ GLQLWRP TAA F+GPPS+SW+ N Y+L QYG++LE + G AQ VFLL + +LS +L+G P +N++IT+ LH L R P + V W+ + YW LP+ L D+LQAQ+PMAALP +GIL+GH Y+F +++WP++ ++ L+APE+ K L+ + D Sbjct: 83 ADTLQK----YKKILPLTRIYITLVGVATLLGLVLGEELTQGLLALDPMRVLYGLQLWRPITAATFLGPPSISWLLNGYYLFQYGSSLERAYGTAQHSVFLLSQLVLLSIFSTLVGQPFFANSMITSMLHVLSRSMPHQKVKWL-VFTVPYWSLPYGLMASDVLQAQSPMAALPHIMGILTGHFYHFHKHIWPKLEQGQDWLVAPEFLSKRLDPADKD 295
BLAST of NO20G01920 vs. NCBI_GenBank
Match: OEU18752.1 (hypothetical protein FRACYDRAFT_268432 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 177.2 bits (448), Expect = 9.800e-41 Identity = 105/273 (38.46%), Postives = 165/273 (60.44%), Query Frame = 0 Query: 66 RRDLAIRSSSRGEGADSPSRWLTRVRGGVQPAKSKSKVKATAPTATG-NKIRYAGEAGTKQK--VKEWYKATPIITRVQLSTSLLLTALGLVAID---PSYFLLDPVKIVTGLQLWRPFTAAAFMGPPSMSWVSNLYFLHQYGTALENSEGAAQQLVFLLFNIAVLSFLGSLIGLPVTSNALITAALHCLGRQDPLRDVNWMFAIKIKYWMLPFCLALVDMLQAQNPMAALPAALGILSGHLYYFLRNVWPQMGHRELLLAPEWWCKLLNRNN 333 R D R ++ DS S L +RGG + K +S+ + A T TG K+ A +A K K + ++YK P +TR ++ L T LGL+ + + LDP++++ G+++WRPFTAA+F+G PS+SW+ + Y+LH+YG++LE + G A+ L+FL I +L+ ++G+P +N++ITA L L R P V W+ I + YW+LP+ L D+LQAQ+ AA+P LGIL GH Y+F R VWP+ G + L AP++ ++ N+ Sbjct: 59 RNDGLFRFNNHNNQYDS-SSVLLELRGGAR-KKKRSRTGSLAKTVTGKTKVGAAKKAAQKPKNSLVDYYKEIPPLTRGYVTMIGLCTVLGLLLGEERAQAVLALDPMRLLHGMEIWRPFTAASFLGKPSISWLMSGYYLHEYGSSLERAYGPAEYLLFLCSQIFLLTIFSMVLGVPFFTNSIITAMLWVLSRAMPNEKVKWL-VITVPYWVLPYGLMASDVLQAQSAAAAMPHILGILVGHFYHFHRFVWPKTGGEDWLRAPDFLVDAMDPNS 328
BLAST of NO20G01920 vs. NCBI_GenBank
Match: XP_002293570.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED89306.1 predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 170.6 bits (431), Expect = 9.200e-39 Identity = 82/177 (46.33%), Postives = 115/177 (64.97%), Query Frame = 0 Query: 148 LTALGLV---AIDPSYFLLDPVKIVTGLQLWRPFTAAAFMGPPSMSWVSNLYFLHQYGTALENSEGAAQQLVFLLFNIAVLSFLGSLIGLPVTSNALITAALHCLGRQDPLRDVNWMFAIKIKYWMLPFCLALVDMLQAQNPMAALPAALGILSGHLYYFLRNVWPQMGHRELLLAP 322 +T LGLV + LDP++++ GL+LWRPFTAA F+GPPS+ W+ N Y+L +YG++LE + G +Q ++FLL I LS + G P + ++IT+ LH L R P + V W+ + YW LP+ L D+LQA N AALP LGILSGHLYYF +NVWP++G + L+ P Sbjct: 5 VTLLGLVLGDELSQGLLALDPIRVMYGLELWRPFTAACFLGPPSIGWLMNAYYLFEYGSSLERAFGTSQHMLFLLLQIGFLSVFSAFFGQPFFAQSVITSMLHVLSRSMPNQQVKWLI-FTVPYWTLPYGLMASDVLQAGNAAAALPHVLGILSGHLYYFHKNVWPKIGGEDWLVPP 180
BLAST of NO20G01920 vs. NCBI_GenBank
Match: XP_002176640.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC51103.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 166.8 bits (421), Expect = 1.300e-37 Identity = 97/273 (35.53%), Postives = 151/273 (55.31%), Query Frame = 0 Query: 90 VRGGVQPAKS----KSKVKATAPTATGNKIRYAGEAGTKQKVKEW---YKATPIITRVQLSTSLLLTALGLV---AIDPSYFLLDPVKIVTGLQLWRPFTAAAFMGPPSMSWVSNLYFLHQYGTALENSEGAAQQLVFLLFNIAVLSFLGSLIGLPVTSNALITAALHCLGRQDPLRDVNWMFAIKIKYWMLPFCLALVDMLQAQNPMAALPAALGILSGHLYYFLRNVWPQMGHRELLLAPEWWCKLLNRNNDDIIFRRDKRPLVGADGSAG 353 +RGG +S + + + + TATG K A A K + + YK +TR+ ++ + T + ++ S LDP + G + WRPFTAA+F+GP S+ W+ + Y+L +YG++LE + G AQ VFL+ + L+FL SL G P ++ITA LH L R P + V W+ + YW LP+ L D+LQAQ+ MAALP LGI+SGH Y+F + +WP+ G + L+AP++ + L+ ++ D + L G + G Sbjct: 49 LRGGASKRRSNKAKSASLNSKSRTATGKKKVGATAAEKKSALSDTMQRYKRIRPLTRIYITMVGVATLISIIFGEEFTQSLLALDPTRAFYGFEFWRPFTAASFLGPISIGWLMSGYYLFEYGSSLERAYGTAQHFVFLMSQVFGLTFLSSLTGQPFFGQSMITAMLHVLSRAMPHQKVKWLI-FTVPYWSLPYGLMASDVLQAQSAMAALPHILGIVSGHFYHFHKFIWPKKGGEDWLVAPDFLVRRLDPDSKDAARESVSKALKGRKKNKG 320
BLAST of NO20G01920 vs. NCBI_GenBank
Match: BAT25218.1 (symbiotic PPC-localized Der [Nitzschia sp. IriIs04]) HSP 1 Score: 162.9 bits (411), Expect = 1.900e-36 Identity = 93/256 (36.33%), Postives = 149/256 (58.20%), Query Frame = 0 Query: 79 GADSPSRWLTRVRGGVQPAKS--KSKVKATAPTATGNKIRYAGEAGTKQKVKEWYKATPIITRVQLSTSLLLTALGLV---AIDPSYFLLDPVKIVTGLQLWRPFTAAAFMGPPSMSWVSNLYFLHQYGTALENSEGAAQQLVFLLFNIAVLSFLGSLIGLPVTSNALITAALHCLGRQDPLRDVNWMFAIKIKYWMLPFCLALVDMLQAQNPMAALPAALGILSGHLYYFLRNVWPQMGHRELLLAPEWWCKLLN 330 G S S + +RGG + S K T G+K++ ++ + ++ + K P TR ++ + T LG+V + S LDP++ + G ++WR FTAA+++G PS++W+ + Y+L QYG++LE + GAAQ +VFL +A+LS L L G P + ++ITA LH L R P + V W+ + YW LP+ L D+LQAQ+ AA+P LGI+SGH ++F R +WP++G + L AP + K ++ Sbjct: 39 GVKSLSSSVLELRGGAKKRGSSIKPAKTVTGKKKVGDKLKAEKQSPVSKLLENYRKVLP-YTRAYITAIGVCTLLGVVLGEELSQSILALDPLRTLAGGEIWRFFTAASYLGTPSVTWLLDSYYLLQYGSSLEQAYGAAQYVVFLFSQLAILSILSILFGQPFFARSMITAMLHVLSRAMPKQQVRWLI-FTVPYWSLPYGLMATDVLQAQSAGAAVPHILGIISGHFFHFHRFIWPKVGGEDWLKAPAFLSKYVD 292
BLAST of NO20G01920 vs. NCBI_GenBank
Match: CEM20934.1 (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 157.9 bits (398), Expect = 6.200e-35 Identity = 91/255 (35.69%), Postives = 141/255 (55.29%), Query Frame = 0 Query: 83 PSRWLTRVRGGVQ-----PAKSKSKVKATAPTATGNKIRYAGEAGTKQKVKEW-------YKATPIITRVQLSTSLLLTALGL--VAIDPSYFLLDPVKIVTGLQLWRPFTAAAFMGPPSMSWVSNLYFLHQYGTALENSEGAAQQLVFLLFNIAVLSFLGSLIGLPVTSNALITAALHCLGRQDPLRDVNWMFAIKIKYWMLPFCLALVDMLQAQNPMAALPAALGILSGHLYYFLRNVWPQMGHRELLLAPEW 324 P L RGG + PAK + + + TA +R ++ + W Y +ITR+ LS +LLL+ L L +++DPS F L+ + V + WRPFTA AF G ++S +S +YF+ QYG +LE ++G+A+QLVF+L + +LS +G LP T A +A ++ R++P V I+++YW +PF A++D+L AQ AA+P +GI +GH Y+F ++P MG L AP W Sbjct: 56 PPDALFTCRGGARASSRGPAKGRRQRRTTADP---KGVRKLSQSPGRSFYSNWIAPVLRIYTNIQLITRLYLSLALLLSLLQLKPLSVDPSVFALEWERTVRSFEFWRPFTAMAFQGDLTLSMISTMYFMWQYGQSLEEAKGSAEQLVFMLTQVILLSLIGFRFQLPFTGRAFSSALVYACSRREPFAMVPVFLNIRVQYWKVPFAQAVIDVLSAQKINAAIPHLMGIATGHFYHFFNQIYPGMGGYAWLSAPRW 307
BLAST of NO20G01920 vs. NCBI_GenBank
Match: EJK73444.1 (hypothetical protein THAOC_04933 [Thalassiosira oceanica]) HSP 1 Score: 156.8 bits (395), Expect = 1.400e-34 Identity = 95/245 (38.78%), Postives = 137/245 (55.92%), Query Frame = 0 Query: 91 RGGVQPAKSKSKVKATAPTATG-NKIRYAGEAGTKQKVKE----WYKATPIITRVQLSTSLLLTALGLV---AIDPSYFLLDPVKIVTGLQLWRPFTAAAFMGPPSMSWVSNLYFLHQYGTALENSEGAAQQLVFLLFNIAVLSFLGSLIGLPVTSNALITAALHCLGRQDPLRDVNWMFAIKIKYWMLPFCLALVDMLQAQN-----PMAALPAALGILSGHLYYFLRNVWPQM-GHRELLLAP 322 RGG + SK K T T TG K++ + + K+ YKA +TRV ++ ++T LGLV I LDP++++ G +LWRP TAA F+G PS+ W+ N Y+L YG++LE G AQ +FL+ I +LS + GLP + ++IT+ LH L R P + V W+ + YW LP+ L D LQA + AALP LGILSGH+Y+F +++WP+ G + L AP Sbjct: 64 RGGRTASLHSSKDKGT--TVTGKQKVKGSNKQDVKKSAVSDQLAKYKAMLPLTRVYITMVGIVTLLGLVLGEEISQGLLALDPIRVMYGFELWRPITAACFLGSPSIGWLMNAYYLFTYGSSLERGVGTAQHFLFLMIQICLLSIFSAFFGLPFFAQSVITSMLHVLSRSMPTQPVKWL-VFTVPYWTLPYGLMASDALQAGSSGGSPAAAALPHILGILSGHIYFFHKSIWPRSEGAEDWLNAP 305
BLAST of NO20G01920 vs. NCBI_GenBank
Match: EJK71058.1 (hypothetical protein THAOC_07539 [Thalassiosira oceanica]) HSP 1 Score: 149.4 bits (376), Expect = 2.200e-32 Identity = 77/184 (41.85%), Postives = 110/184 (59.78%), Query Frame = 0 Query: 147 LLTALGLV---AIDPSYFLLDPVKIVTGLQLWRPFTAAAFMGPPSMSWVSNLYFLHQYGTALENSEGAAQQLVFLLFNIAVLSFLGSLIGLPVTSNALITAALHCLGRQDPLRDVNWMFAIKIKYWMLPFCLALVDMLQAQN-----PMAALPAALGILSGHLYYFLRNVWPQM-GHRELLLAP 322 ++T LGLV I LDP++++ G +LWRP TAA F+G PS+ W+ N Y+L YG++LE G AQ +FL+ I +LS + GLP + ++IT+ LH L R P + V W+ + YW LP+ L D LQA + AALP LGILSGH+Y+F +++WP+ G + L AP Sbjct: 4 IVTLLGLVLGEEISQGLLALDPIRVMYGFELWRPITAACFLGSPSIGWLMNAYYLFTYGSSLERGVGTAQHFLFLMIQICILSIFSAFFGLPFFAQSVITSMLHVLSRSMPTQPVKWL-VFTVPYWTLPYGLMASDALQAGSSGGSPAAAALPHILGILSGHIYFFHKSIWPRSEGAEDWLNAP 186
BLAST of NO20G01920 vs. NCBI_GenBank
Match: CBJ29494.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 146.4 bits (368), Expect = 1.900e-31 Identity = 84/204 (41.18%), Postives = 127/204 (62.25%), Query Frame = 0 Query: 131 YKATPIITRVQLSTSLLLTALGL---VAIDP-SYFLLDPVKIVTGLQLWRPFTAAAFMGPPSMSWVSNLYFLHQYGTALENSEGAAQQLVFLLFNIAVLSFLGSLIGLPVTSNALITAALHCLGRQDPLRDVNWMFAIKIKYWMLPFCLALVDMLQAQ-NPMAALPAALGILSGHLYYFLRNVWPQMGHRELLLAPEWWCKLLN 330 +K P TR + +++TA+ + AID + F +D + V GL+LWRP T+ ++GP SMSW++N+YFL Q+GT LE G A+Q++FLL ++L FLG LIG+P+ S +++ A + R DPL V + F ++I W LPF +LQA+ +P+AA+P +GIL GH+Y+F V P MG + L AP W + L+ Sbjct: 106 FKNMPPATRAYVLLLMVITAVDVSVGKAIDSGNTFSMDWGRTVKGLELWRPLTSLVYLGPLSMSWLTNVYFLTQHGTRLELVSGTAEQVIFLLVVGSLLLFLGPLIGMPLLSTSMVAAHTYVSARMDPLGAVQFQF-LRIPMWTLPFAQMGAAVLQAEGSPLAAIPHFVGILCGHVYHFFTVVHPLMGAKRRLGAPGWMKRRLD 308 The following BLAST results are available for this feature:
BLAST of NO20G01920 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO20G01920 ID=NO20G01920|Name=NO20G01920|organism=Nannochloropsis oceanica|type=gene|length=1405bpback to top protein sequence of NO20G01920.1 >NO20G01920.1-protein ID=NO20G01920.1-protein|Name=NO20G01920.1|organism=Nannochloropsis oceanica|type=polypeptide|length=381bpback to top Synonyms
Publications
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