NO20G01770, NO20G01770 (gene) Nannochloropsis oceanica

Overview
NameNO20G01770
Unique NameNO20G01770
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3243
Alignment locationchr20:534307..537549 +

Link to JBrowse

Properties
Property NameValue
DescriptionPlasma membrane intrinsic protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr20genomechr20:534307..537549 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
GO:0006810transport
Vocabulary: Molecular Function
TermDefinition
GO:0015267channel activity
GO:0005215transporter activity
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
GO:0016020membrane
Vocabulary: INTERPRO
TermDefinition
IPR023271Aquaporin-like
IPR034294Aquaporin_transptr
IPR000425MIP
Homology
BLAST of NO20G01770 vs. NCBI_GenBank
Match: EWM22052.1 (plasma membrane intrinsic protein [Nannochloropsis gaditana])

HSP 1 Score: 485.3 bits (1248), Expect = 1.400e-133
Identity = 251/323 (77.71%), Postives = 274/323 (84.83%), Query Frame = 0
Query:    1 MADTTHAAAPGFMAPVDLEMDPVASEAPHEANAPGFEAPPTSRKLQSLDDYKQYFMAEMSHPTFTQSVIAEWWATTLFLFFLILSCLPGANDGQEVFRIGIVAGLMITILVYAFYAVSGGNINPAVSLGLALSGRMTAPRAIFYIAAQIIGAITGTAMAKVVSPTAFNLGKGGMNALQVLNVGDDIVTITAGQAFFGEVMGSMLLVLAVLFCTDTARSIEHPHMVALIPVEIGFVVLLCHIALIPIDGCGINPARSIGSAAIYGSNLDLWIFVWAPVVGAIFAAVTYRFIFSPTEVFNDYFKPSNVVDRASKRLRTLSGQGSG 324
            +A T  +A PGFM PVD+E     ++   EAN PGF A   +  L +L+DYK+YF+ EM HPTF QSVIAEWWATTLFLFFLILSCLPGANDGQEVFRIGIVAGL I ILVYAFYAVSGGNINPAVSLGLALSGRMTAPRA FYIAAQI+GAITGTAMAK VSP AF+LGKGGMNALQ L+V  + + IT GQAFF EVMGSMLLVLAVLFCTDTARSIEHPHM ALIP+EIGFVVLL H+A+IPIDGCGINPARSIGSAAIYGS + LWIFVW PVVGA FAA+ YR IF+PTEVFN+YFKP NV+ RASK LRTLSGQ  G
Sbjct:    2 VAATRQSAPPGFMVPVDIEPSSPGAQR-FEANPPGFMATLPTHTLNTLNDYKEYFITEMKHPTFAQSVIAEWWATTLFLFFLILSCLPGANDGQEVFRIGIVAGLTIAILVYAFYAVSGGNINPAVSLGLALSGRMTAPRACFYIAAQIVGAITGTAMAKAVSPRAFDLGKGGMNALQTLDVDLESIAITEGQAFFAEVMGSMLLVLAVLFCTDTARSIEHPHMTALIPLEIGFVVLLAHVAMIPIDGCGINPARSIGSAAIYGSLVHLWIFVWGPVVGACFAALIYRLIFAPTEVFNEYFKPENVMARASKGLRTLSGQDRG 323          
BLAST of NO20G01770 vs. NCBI_GenBank
Match: NP_001274308.1 (aquaporin PIP2-1-like [Solanum lycopersicum] >BAO18628.1 plasmamembrane intrinsic protein 2;5 [Solanum lycopersicum])

HSP 1 Score: 152.1 bits (383), Expect = 2.900e-33
Identity = 97/243 (39.92%), Postives = 139/243 (57.20%), Query Frame = 0
Query:   58 EMSHPTFTQSVIAEWWATTLFLFFLILSCL--PGANDGQEVFRIGIVA-----GLMITILVYAFYAVSGGNINPAVSLGLALSGRMTAPRAIFYIAAQIIGAITGTAMAKVVSPTAFNLGKGGMNALQVLNVGDDIVTITAGQAFFGEVMGSMLLVLAVLFCTDTARSIEHPHMVALIPVEIGFVVLLCHIALIPIDGCGINPARSIGSAAIYGSNL---DLWIFVWAPVVGAIFAAVTYRFI 291
            E+   +F +++IAE+ AT LFL+  +L+ +     +DG +   +GI+      G MI +LVY    +SGG+INPAV+ GL L+ +++  RAIFYI AQ +GAI G  + K+     +    GG N L    VG +I T         E++G+ +LV  V   TD  R+    H+  L P+ IGF V + H+A IPI G GINPARS G+A IYG N    D WIF   P +GA  AA+ +++I
Sbjct:   31 ELGKWSFYRAIIAEFIATLLFLYITVLTVIGYKSQSDGDQCGGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLLLARKVSLVRAIFYIVAQCLGAICGCGLVKLFQKAYYVKYGGGANELA---VGYNIAT-----GLGAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYGKNKSWDDQWIFWVGPFIGAAIAAIYHQYI 265          
BLAST of NO20G01770 vs. NCBI_GenBank
Match: NP_001312350.1 (aquaporin PIP2-7-like [Nicotiana tabacum] >XP_009600501.1 PREDICTED: aquaporin PIP2-7-like [Nicotiana tomentosiformis] >DAA64680.1 TPA_exp: aquaporin PIP2 6a [Nicotiana tabacum])

HSP 1 Score: 151.8 bits (382), Expect = 3.800e-33
Identity = 97/245 (39.59%), Postives = 133/245 (54.29%), Query Frame = 0
Query:   56 MAEMSHPTFTQSVIAEWWATTLFLFFLILSCLPGAN-------DGQEVFRIGIVAGLMITILVYAFYAVSGGNINPAVSLGLALSGRMTAPRAIFYIAAQIIGAITGTAMAKVVSPTAFNLGKGGMNALQVLNVGDDIVTITAGQAFFGEVMGSMLLVLAVLFCTDTARSIEHPHMVALIPVEIGFVVLLCHIALIPIDGCGINPARSIGSAAIYGSNL---DLWIFVWAPVVGAIFAAVTYRFI 291
            MAE++  +F ++VIAE+ AT LFL+  + + +           DG  +  I    G MI +LVY    +SGG+INPAV+ GL L+ +++  RA+ YI AQ +GAI G    K      +NL  GG N +Q             G A   E++G+ +LV  V   TD  RS    H+  L P+ IGF V + H+A IPI G GINPARS G+A IY       D WIF   P VGA+ AA+ Y+F+
Sbjct:   29 MAELTKWSFYRAVIAEFIATLLFLYVTVATVIGHKKLNAADHCDGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLLLARKVSLIRAVAYIIAQSLGAICGVGFVKAFMKHYYNLEGGGANFVQ--------PGYNKGTALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKEKIWDDQWIFWVGPFVGALIAAIYYQFV 265          
BLAST of NO20G01770 vs. NCBI_GenBank
Match: ADE76283.1 (unknown [Picea sitchensis])

HSP 1 Score: 151.4 bits (381), Expect = 5.000e-33
Identity = 92/240 (38.33%), Postives = 134/240 (55.83%), Query Frame = 0
Query:   63 TFTQSVIAEWWATTLFLFFLILSCLPGANDGQEVFRIGIVA-----GLMITILVYAFYAVSGGNINPAVSLGLALSGRMTAPRAIFYIAAQIIGAITGTAMAKVVSPTAFNLGKGGMNALQVLNVGDDIVTITAGQAFFGEVMGSMLLVLAVLFCTDTARSIEHPHMVALIPVEIGFVVLLCHIALIPIDGCGINPARSIGSAAIYG---SNLDLWIFVWAPVVGAIFAAVTYRFIFSPT 295
            +F +++IAE+ AT LFL+  I + +  AN  +    +G +      G MI +LVY    VSGG+INPAV+ GL ++ +MT  RA+FYI AQ +GA+ G  M K +    ++ G GG N ++            +  A   E+ G+ +LV  V   TD   +    H+ AL P+ +GF V + H+A IPI G GINPARS G+A IYG   S  D WIF   P++GA  AA  ++++   T
Sbjct:   30 SFYRAIIAEFVATLLFLYVTIATVIGNANQKKPCGGVGTLGIAWSFGGMIFVLVYCTAGVSGGHINPAVTFGLFVARKMTLNRAVFYIVAQCLGAVCGAGMVKALQKNYYSAGGGGANTVK--------EGYASETALAAEIAGTFVLVYTVFCATDPKSNARDSHVPALAPLSVGFAVFMVHLATIPITGTGINPARSFGAAVIYGHKKSWNDHWIFWVGPLIGATIAAAFHKYVIRAT 261          
BLAST of NO20G01770 vs. NCBI_GenBank
Match: XP_015055154.1 (PREDICTED: aquaporin PIP2-1-like [Solanum pennellii])

HSP 1 Score: 151.4 bits (381), Expect = 5.000e-33
Identity = 97/243 (39.92%), Postives = 139/243 (57.20%), Query Frame = 0
Query:   58 EMSHPTFTQSVIAEWWATTLFLFFLILSCL--PGANDGQEVFRIGIVA-----GLMITILVYAFYAVSGGNINPAVSLGLALSGRMTAPRAIFYIAAQIIGAITGTAMAKVVSPTAFNLGKGGMNALQVLNVGDDIVTITAGQAFFGEVMGSMLLVLAVLFCTDTARSIEHPHMVALIPVEIGFVVLLCHIALIPIDGCGINPARSIGSAAIYGSNL---DLWIFVWAPVVGAIFAAVTYRFI 291
            E+   +F +++IAE+ AT LFL+  +L+ +     +DG +   +GI+      G MI +LVY    +SGG+INPAV+ GL L+ +++  RAIFYI AQ +GAI G  + K+     +    GG N L    VG +I T         E++G+ +LV  V   TD  R+    H+  L P+ IGF V + H+A IPI G GINPARS G+A IYG N    D WIF   P +GA  AA+ +++I
Sbjct:   31 ELGKWSFYRAIIAEFIATLLFLYITVLTVIGYKSQSDGDQCGGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLLLARKVSLVRAIFYIVAQCLGAICGCGLVKLFQKAYYVKYGGGANELA---VGYNIAT-----GLGAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYGKNKSWDDQWIFWVGPFIGAAIAALYHQYI 265          
BLAST of NO20G01770 vs. NCBI_GenBank
Match: XP_002884019.1 (probable aquaporin PIP2-8 [Arabidopsis lyrata subsp. lyrata] >EFH60278.1 PIP2_8/PIP3B [Arabidopsis lyrata subsp. lyrata])

HSP 1 Score: 151.0 bits (380), Expect = 6.500e-33
Identity = 97/243 (39.92%), Postives = 136/243 (55.97%), Query Frame = 0
Query:   56 MAEMSHPTFTQSVIAEWWATTLFLFFLILSCLPGAN-----DGQEVFRIGIVAGLMITILVYAFYAVSGGNINPAVSLGLALSGRMTAPRAIFYIAAQIIGAITGTAMAKVVSPTAFNLGKGGMNALQVLNVGDDIVTITAGQAFFGEVMGSMLLVLAVLFCTDTARSIEHPHMVALIPVEIGFVVLLCHIALIPIDGCGINPARSIGSAAIYGSNL---DLWIFVWAPVVGAIFAAVTYRFI 291
            MAE+   +F +++IAE+ AT LFL+  + + +   N     DG  +  I    G MI +LVY    +SGG+INPAV+ GL L+ +++ PRA+ Y+ AQ +GAI G  + K    T +    GG N      V DD  T   G A   E++G+ +LV  V   TD  RS    H+  L P+ IGF V + H+A IPI G GINPARS G+A IY +     D WIF   P +GA+ AA  +++I
Sbjct:   26 MAEIKLWSFYRAIIAEFIATLLFLYVTVATVIGHKNQNGPCDGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLPRAVAYMVAQCLGAICGVGLVKAFMMTPYKRLGGGAN-----TVADDYST---GTALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNEKAWDDHWIFWVGPFLGALAAAAYHQYI 260          
BLAST of NO20G01770 vs. NCBI_GenBank
Match: NP_001312874.1 (aquaporin PIP2-7-like [Nicotiana tabacum] >XP_009803627.1 PREDICTED: aquaporin PIP2-7-like [Nicotiana sylvestris] >DAA64681.1 TPA_exp: aquaporin PIP2 6b [Nicotiana tabacum])

HSP 1 Score: 151.0 bits (380), Expect = 6.500e-33
Identity = 97/245 (39.59%), Postives = 134/245 (54.69%), Query Frame = 0
Query:   56 MAEMSHPTFTQSVIAEWWATTLFLFFLILSCLPGAN-------DGQEVFRIGIVAGLMITILVYAFYAVSGGNINPAVSLGLALSGRMTAPRAIFYIAAQIIGAITGTAMAKVVSPTAFNLGKGGMNALQVLNVGDDIVTITAGQAFFGEVMGSMLLVLAVLFCTDTARSIEHPHMVALIPVEIGFVVLLCHIALIPIDGCGINPARSIGSAAIYGSNL---DLWIFVWAPVVGAIFAAVTYRFI 291
            MAE++  +F ++VIAE+ AT LFL+  + + +           DG  +  I    G MI +LVY    +SGG+INPAV+LGL L+ +++  RA+ YI AQ +GAI G    K      +NL  GG N +Q             G A   E++G+ +LV  V   TD  RS    H+  L P+ IGF V + H+A IPI G GINPARS G+A IY       D WIF   P VGA+ AA+ ++F+
Sbjct:   29 MAELTKWSFYRAVIAEFIATLLFLYVTVATVIGHKKLNAADHCDGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKVSLIRAVAYIIAQSLGAICGVGFVKAFMKHYYNLEGGGANFVQ--------PGYNKGTALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKEKIWDDQWIFWVGPFVGALIAAIYHQFV 265          
BLAST of NO20G01770 vs. NCBI_GenBank
Match: XP_023767827.1 (aquaporin PIP2-4-like [Lactuca sativa] >XP_023767828.1 aquaporin PIP2-4-like [Lactuca sativa] >PLY82510.1 hypothetical protein LSAT_2X108980 [Lactuca sativa] >PLY82576.1 hypothetical protein LSAT_2X108920 [Lactuca sativa])

HSP 1 Score: 151.0 bits (380), Expect = 6.500e-33
Identity = 98/282 (34.75%), Postives = 149/282 (52.84%), Query Frame = 0
Query:   29 HEANAPGFEAPPTSRKLQSLDDYKQYFMAEMSHPTFTQSVIAEWWATTLFLFFLILSCL------PGANDGQEVFRIGIVA-----GLMITILVYAFYAVSGGNINPAVSLGLALSGRMTAPRAIFYIAAQIIGAITGTAMAKVVSPTAFNLGKGGMNALQVLNVGDDIVTITAGQAFFGEVMGSMLLVLAVLFCTDTARSIEHPHMVALIPVEIGFVVLLCHIALIPIDGCGINPARSIGSAAIYGSNL---DLWIFVWAPVVGAIFAAVTYRFIFSPTEV 297
            H+ +A  +E PP +  + +          E++  +F +++IAE+ AT LFL+  +L+ +        A+   +   +GI+      G MI +LVY    +SGG+INPAV+ GL L+ ++T PRA+ YI AQ +GAI G  + K    T +N   GG N L            + G     E++G+ +LV  V   TD  R+    H+  L P+ IGF V + H+A IPI G GINPARS G+A +YG +    D WIF   P++GA  AA  ++++     V
Sbjct:   10 HDYSAKDYEDPPPAAFIDA---------EELTKWSFYRAIIAEFIATLLFLYITVLTVIGYKSQTDPAHSSDQCGGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVTLPRAVMYIVAQCLGAICGCGLVKAFQKTYYNTYGGGANEL--------ADGYSKGTGLGAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVMYGKDKAWDDQWIFWVGPMIGAAIAAFYHQYVLRAAAV 274          
BLAST of NO20G01770 vs. NCBI_GenBank
Match: XP_023767826.1 (aquaporin PIP2-4-like [Lactuca sativa] >PLY82451.1 hypothetical protein LSAT_2X109001 [Lactuca sativa])

HSP 1 Score: 151.0 bits (380), Expect = 6.500e-33
Identity = 98/282 (34.75%), Postives = 149/282 (52.84%), Query Frame = 0
Query:   29 HEANAPGFEAPPTSRKLQSLDDYKQYFMAEMSHPTFTQSVIAEWWATTLFLFFLILSCL------PGANDGQEVFRIGIVA-----GLMITILVYAFYAVSGGNINPAVSLGLALSGRMTAPRAIFYIAAQIIGAITGTAMAKVVSPTAFNLGKGGMNALQVLNVGDDIVTITAGQAFFGEVMGSMLLVLAVLFCTDTARSIEHPHMVALIPVEIGFVVLLCHIALIPIDGCGINPARSIGSAAIYGSNL---DLWIFVWAPVVGAIFAAVTYRFIFSPTEV 297
            H+ +A  +E PP +  + +          E++  +F +++IAE+ AT LFL+  +L+ +        A+   +   +GI+      G MI +LVY    +SGG+INPAV+ GL L+ ++T PRA+ YI AQ +GAI G  + K    T +N   GG N L            + G     E++G+ +LV  V   TD  R+    H+  L P+ IGF V + H+A IPI G GINPARS G+A +YG +    D WIF   P++GA  AA  ++++     V
Sbjct:   10 HDYSAKDYEDPPPAAFIDT---------EELTKWSFYRAIIAEFIATLLFLYITVLTVIGYKSQTDPAHSSDQCGGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVTLPRAVMYIVAQCLGAICGCGLVKAFQKTYYNTYGGGANEL--------ADGYSKGTGLGAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVMYGKDKAWDDQWIFWVGPMIGAAIAAFYHQYVLRAAAV 274          
BLAST of NO20G01770 vs. NCBI_GenBank
Match: XP_022767345.1 (aquaporin PIP2-2-like [Durio zibethinus])

HSP 1 Score: 150.6 bits (379), Expect = 8.500e-33
Identity = 98/247 (39.68%), Postives = 141/247 (57.09%), Query Frame = 0
Query:   58 EMSHPTFTQSVIAEWWATTLFLFFLIL------SCLPGANDGQEVFRIGIVA-----GLMITILVYAFYAVSGGNINPAVSLGLALSGRMTAPRAIFYIAAQIIGAITGTAMAKVVSPTAFNLGKGGMNALQVLNVGDDIVTITAGQAFFGEVMGSMLLVLAVLFCTDTARSIEHPHMVALIPVEIGFVVLLCHIALIPIDGCGINPARSIGSAAIYGSNL---DLWIFVWAPVVGAIFAAVTYRFI 291
            E++  +F ++VIAE+ AT LFL+  +L      S +  A  G++   +GI+      G MI ILVY    +SGG+INPAV+ GL L+ +++  RAIFY+AAQ +GAI G  + K +  + +N   GG N+L      D   T   G     E++G+ +LV  V   TD  R+    H+  L P+ IGF V + H+A IPI G GINPARS G+A IY  +    D WIF   P +GA  AA+ +++I
Sbjct:   29 ELTKWSFYRAVIAEFIATLLFLYITVLTVIGYKSQVDTAKGGEDCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLVRAIFYMAAQCLGAICGCGLVKALQKSYYNQYGGGANSL-----ADGYST---GTGLAAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNQDKPWDDQWIFWVGPFIGAAIAAIYHQYI 267          
The following BLAST results are available for this feature:
BLAST of NO20G01770 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM22052.11.400e-13377.71plasma membrane intrinsic protein [Nannochloropsis... [more]
NP_001274308.12.900e-3339.92aquaporin PIP2-1-like [Solanum lycopersicum] >BAO1... [more]
NP_001312350.13.800e-3339.59aquaporin PIP2-7-like [Nicotiana tabacum] >XP_0096... [more]
ADE76283.15.000e-3338.33unknown [Picea sitchensis][more]
XP_015055154.15.000e-3339.92PREDICTED: aquaporin PIP2-1-like [Solanum pennelli... [more]
XP_002884019.16.500e-3339.92probable aquaporin PIP2-8 [Arabidopsis lyrata subs... [more]
NP_001312874.16.500e-3339.59aquaporin PIP2-7-like [Nicotiana tabacum] >XP_0098... [more]
XP_023767827.16.500e-3334.75aquaporin PIP2-4-like [Lactuca sativa] >XP_0237678... [more]
XP_023767826.16.500e-3334.75aquaporin PIP2-4-like [Lactuca sativa] >PLY82451.1... [more]
XP_022767345.18.500e-3339.68aquaporin PIP2-2-like [Durio zibethinus][more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL021nonsL021Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR020ncniR020Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR067ngnoR067Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK002714NSK002714Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO20G01770.1NO20G01770.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|594874gene_6396Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100052g4gene8376Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO20G01770.1NO20G01770.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO20G01770 ID=NO20G01770|Name=NO20G01770|organism=Nannochloropsis oceanica|type=gene|length=3243bp
CGCCAAATAACCACCGATGTGACCACTTTGTCTTTTCGAGGTACCGAGAA
GCTGAGCCAGAAGCTGGAAAGGATATATATATACATAATGGTAGGTAGGG
TGCCCGTGTTTTGATGTCCCTACTATGGGTAGGTATGGTGCCCGTGTGGA
GCCAAGGTCTTCGAAATATTGGAGCTCCGAAGGCGAGGAGTTGCCGATGC
TGTCGGCCCGGGGCTTGAAAGAAGGCGGTTCTCCTTATCCATTGGCAAGG
ACATTTTGCCTTATTGGCTGTGTCGCTTATAATATATGCCTGATTGTTTG
GCTCTATGAGTCATACAGCGACTGGTCGCTCGTCTTGAGCCACGGCTTGT
TTTTGCCTTTTTTGCCACGACGCAGCGTGGAGGTACGGCATATGTGACCG
ACCAAATGCACATATCAGCTCCACCATGCCCGGCCTTGGGAGTCCTAGTT
GAGGCAGAGAGCAAGAAATGAACTAAGGGCATTTTTTACGAGTGTCAGGG
CTTGGCAAGTTTAAAGGCCTTGGATCAACCCGGCCTTGGCTTTACATGGC
TTTGTCGGTCTACAACTTTTACTTGTGACTTGCAATCCCTCCCGCCTCCT
CGCCCTTGCCCTTGCTTAAGTTGAAGATACGCCCCCTTTTAACTTGACCC
TTAACCATCAGGTTACTCCACGGCCGAGTAGCCGTGGAAAAAGTTCGGGG
CACACGCTTTCAACGCCGCCTTGGCCTATCTGCACGCCTCGTTCGTGACC
CCGCACACTCGACAAGAGACTTTTCCCTCATGTCGCTCGGACCCAAATTC
TGTATCATTGTATCTTGGCTCTACTAAGACAAACAGTACAATCTTAAAAC
TGATCCATGCACGACGTCTGGACTTACATCGACGATTTGTTAATTCTTTT
CGGGGTGCTGGCCACCCACGACACCCGCTTCTCCATACAAGCTCTGTGCA
AAGCTCACGGCCTACACCACCCTACACGTTATTGGCACTCCAGACGTCAT
AGCCCTCTGCCGTCCGCTTCAAATTCCTCTCCACACATTCATCCTTTGCC
TGCTTTACCAGCACGTCAAGTCTGCTCCCCGCCCGCCTCTTCCCTGTGTG
ATTGTTTCAGGATTGACGATTTGGTTGTACTGTTTTTGTAACAAGCTTGC
GCTCCTGGAGTAGCCCAGTAGCATCTGCTCCCCTTTCCATATCCATCCAC
ACCTTTTCACCTCCTGTCATATATATAGCACCGCTCGCAAGCAATATCCA
CTTTAATATGCATGCCCGCTTTTTGATTCGTTTTCGCCGTGTTGAACAGC
CATCTTGCCGTTTGCCTGGTATCAGTGCCTATCTTTGCGTCTCATGTTGT
CCTCATATGTGATAAGGTTCTGGCCAATAAGCTTGGCTTGAGCACCTGCT
CGAGTAGAGCTGAGCACTTGCCCCCCGAACGCACCTACCACTCACCCATT
CTCCCCCCCCCCATCAGTCGCGCACTTCGTACAGAGTTACTCAAACCACA
CTTTCTGAGTCTTCGACCATGGCTGACACCACTCACGCCGCCGCCCCTGG
TTTCATGGCCCCCGTCGACCTGGAAATGGACCCCGTTGCCTCCGAGGCCC
CGCATGAGGCAAACGCCCCAGGTTTCGAGGCCCCTCCCACCAGCCGCAAG
CTCCAGTCCCTGGACGACTACAAGCAGTACTTTATGGCAGAAATGAGCCA
CCCTACTTTCACACAATCGGTTATTGCCGAGTGGTGGGCGACGACACTCT
TCCTCTTCTTTTTGATCCTGAGCTGCTTGCCTGGGGCTAACGACGGGCAG
GAGGTCTTCCGCATTGGCATTGTGGCCGGTCTCATGATCACCATCCTGGT
GTACGCGTTCTATGCCGTCAGTGGCGGGAATATAAATCCTGCCGTCTCTC
TGGGCCTAGCCTTGTCGGGGCGCATGACGGCTCCTCGTGCTATTTTTTAC
ATCGCGGCGCAGATTATCGGTGCCATTACCGGGACGGCCATGGCCAAGGT
GGTTAGCCCAACGGCCTTCAATCTGGGCAAAGGTGGAATGAACGCGCTGC
AAGTGCTAAATGTCGGGGATGATATTGTGACGATCACTGCAGGGCAGGCG
TTTTTTGGTGAGGTGATGGGCAGCATGCTTCTGGTGTTGGCTGTCTTGTT
TTGCACGGACACGGCCCGTTCGATCGAGCACCCTCACATGGTGGCCTTAA
TCCCCGTAGAGATCGGCTTTGTCGTGCTCCTCTGCCACATCGCCCTCATT
CCCATTGACGGCTGTGGCATCAACCCCGCGCGTTCCATCGGCTCGGCCGC
CATTTATGGCTCCAACCTCGATCTCTGGATCTTCGTCTGGGCGCCCGTGG
TCGGGGCGATCTTCGCCGCCGTCACCTATCGTTTCATCTTTTCCCCTACA
GAGGTATTCAACGATTATTTCAAGCCCAGCAATGTCGTGGACCGAGCATC
CAAGCGCCTGCGTACCCTCTCGGGGCAGGGCAGTGGGATGGGCCAGTAAG
AAAGACGTGAATGAGACAGGGTAATGGAAGGAGGTGAGAGGTAGGGTGTC
ATTTTTTCTGGCTCTTTTTTGTTTCGTTACTCTCGGGTTGTTCATGTGTC
GTCTTAGTCGATCGTGAGGGATGAGAAGGCCTTGGGAAAGCATGAGGGAA
GAACGGGAAGCACTGAAAGGAAGGGAGAACTTGGAGCAACAAGGAGACAA
AGAAGTAGAGGGACAGAGGGAGTGAATGAGAAAAACAAAAAGGCAAACAC
ACACACATTTACACTCACACTGAGATAGAGAAATCTCTATAAAAAGATAT
GATTGTAGTGTGTGAACATAAAATATTGTTCAGTGTGCATGTGTGGGCAG
TGTCTGAGTAAGCAGACAGATGATTGTATGTGTGAATGAGGAAAATGCGA
ATGATCTTCATTTTGTCTATCTTTCTCTTTCTTTCCAAATTAGGGGTATG
GAGAAAATGAAAAGGAGCTCCAGCGACCGTCTCAGTCGATGTGTACAACT
GACAACAAAGTTAAGATGAGGAAAGAATAAGCTTGTGCTGCTGCTGCGAG
TAGGTCTTGGCTTGAAAATACATTGATGGTGACCCGAGTGCACAGGCAGC
AACAGCCAGCACTTTAAGATACACACAATGAATGGGTAAAATGACACCAT
CAACTGTGCCACCTTATCACCTACATATTAGTCATCAAGAAAACATTAAT
GGTGCTAAAAGAAGCAAAAAGGTGCGTTACGGATGGAATTCCA
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protein sequence of NO20G01770.1

>NO20G01770.1-protein ID=NO20G01770.1-protein|Name=NO20G01770.1|organism=Nannochloropsis oceanica|type=polypeptide|length=327bp
MADTTHAAAPGFMAPVDLEMDPVASEAPHEANAPGFEAPPTSRKLQSLDD
YKQYFMAEMSHPTFTQSVIAEWWATTLFLFFLILSCLPGANDGQEVFRIG
IVAGLMITILVYAFYAVSGGNINPAVSLGLALSGRMTAPRAIFYIAAQII
GAITGTAMAKVVSPTAFNLGKGGMNALQVLNVGDDIVTITAGQAFFGEVM
GSMLLVLAVLFCTDTARSIEHPHMVALIPVEIGFVVLLCHIALIPIDGCG
INPARSIGSAAIYGSNLDLWIFVWAPVVGAIFAAVTYRFIFSPTEVFNDY
FKPSNVVDRASKRLRTLSGQGSGMGQ*
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Synonyms
Publications