NO20G01770, NO20G01770 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO20G01770 vs. NCBI_GenBank
Match: EWM22052.1 (plasma membrane intrinsic protein [Nannochloropsis gaditana]) HSP 1 Score: 485.3 bits (1248), Expect = 1.400e-133 Identity = 251/323 (77.71%), Postives = 274/323 (84.83%), Query Frame = 0 Query: 1 MADTTHAAAPGFMAPVDLEMDPVASEAPHEANAPGFEAPPTSRKLQSLDDYKQYFMAEMSHPTFTQSVIAEWWATTLFLFFLILSCLPGANDGQEVFRIGIVAGLMITILVYAFYAVSGGNINPAVSLGLALSGRMTAPRAIFYIAAQIIGAITGTAMAKVVSPTAFNLGKGGMNALQVLNVGDDIVTITAGQAFFGEVMGSMLLVLAVLFCTDTARSIEHPHMVALIPVEIGFVVLLCHIALIPIDGCGINPARSIGSAAIYGSNLDLWIFVWAPVVGAIFAAVTYRFIFSPTEVFNDYFKPSNVVDRASKRLRTLSGQGSG 324 +A T +A PGFM PVD+E ++ EAN PGF A + L +L+DYK+YF+ EM HPTF QSVIAEWWATTLFLFFLILSCLPGANDGQEVFRIGIVAGL I ILVYAFYAVSGGNINPAVSLGLALSGRMTAPRA FYIAAQI+GAITGTAMAK VSP AF+LGKGGMNALQ L+V + + IT GQAFF EVMGSMLLVLAVLFCTDTARSIEHPHM ALIP+EIGFVVLL H+A+IPIDGCGINPARSIGSAAIYGS + LWIFVW PVVGA FAA+ YR IF+PTEVFN+YFKP NV+ RASK LRTLSGQ G Sbjct: 2 VAATRQSAPPGFMVPVDIEPSSPGAQR-FEANPPGFMATLPTHTLNTLNDYKEYFITEMKHPTFAQSVIAEWWATTLFLFFLILSCLPGANDGQEVFRIGIVAGLTIAILVYAFYAVSGGNINPAVSLGLALSGRMTAPRACFYIAAQIVGAITGTAMAKAVSPRAFDLGKGGMNALQTLDVDLESIAITEGQAFFAEVMGSMLLVLAVLFCTDTARSIEHPHMTALIPLEIGFVVLLAHVAMIPIDGCGINPARSIGSAAIYGSLVHLWIFVWGPVVGACFAALIYRLIFAPTEVFNEYFKPENVMARASKGLRTLSGQDRG 323
BLAST of NO20G01770 vs. NCBI_GenBank
Match: NP_001274308.1 (aquaporin PIP2-1-like [Solanum lycopersicum] >BAO18628.1 plasmamembrane intrinsic protein 2;5 [Solanum lycopersicum]) HSP 1 Score: 152.1 bits (383), Expect = 2.900e-33 Identity = 97/243 (39.92%), Postives = 139/243 (57.20%), Query Frame = 0 Query: 58 EMSHPTFTQSVIAEWWATTLFLFFLILSCL--PGANDGQEVFRIGIVA-----GLMITILVYAFYAVSGGNINPAVSLGLALSGRMTAPRAIFYIAAQIIGAITGTAMAKVVSPTAFNLGKGGMNALQVLNVGDDIVTITAGQAFFGEVMGSMLLVLAVLFCTDTARSIEHPHMVALIPVEIGFVVLLCHIALIPIDGCGINPARSIGSAAIYGSNL---DLWIFVWAPVVGAIFAAVTYRFI 291 E+ +F +++IAE+ AT LFL+ +L+ + +DG + +GI+ G MI +LVY +SGG+INPAV+ GL L+ +++ RAIFYI AQ +GAI G + K+ + GG N L VG +I T E++G+ +LV V TD R+ H+ L P+ IGF V + H+A IPI G GINPARS G+A IYG N D WIF P +GA AA+ +++I Sbjct: 31 ELGKWSFYRAIIAEFIATLLFLYITVLTVIGYKSQSDGDQCGGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLLLARKVSLVRAIFYIVAQCLGAICGCGLVKLFQKAYYVKYGGGANELA---VGYNIAT-----GLGAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYGKNKSWDDQWIFWVGPFIGAAIAAIYHQYI 265
BLAST of NO20G01770 vs. NCBI_GenBank
Match: NP_001312350.1 (aquaporin PIP2-7-like [Nicotiana tabacum] >XP_009600501.1 PREDICTED: aquaporin PIP2-7-like [Nicotiana tomentosiformis] >DAA64680.1 TPA_exp: aquaporin PIP2 6a [Nicotiana tabacum]) HSP 1 Score: 151.8 bits (382), Expect = 3.800e-33 Identity = 97/245 (39.59%), Postives = 133/245 (54.29%), Query Frame = 0 Query: 56 MAEMSHPTFTQSVIAEWWATTLFLFFLILSCLPGAN-------DGQEVFRIGIVAGLMITILVYAFYAVSGGNINPAVSLGLALSGRMTAPRAIFYIAAQIIGAITGTAMAKVVSPTAFNLGKGGMNALQVLNVGDDIVTITAGQAFFGEVMGSMLLVLAVLFCTDTARSIEHPHMVALIPVEIGFVVLLCHIALIPIDGCGINPARSIGSAAIYGSNL---DLWIFVWAPVVGAIFAAVTYRFI 291 MAE++ +F ++VIAE+ AT LFL+ + + + DG + I G MI +LVY +SGG+INPAV+ GL L+ +++ RA+ YI AQ +GAI G K +NL GG N +Q G A E++G+ +LV V TD RS H+ L P+ IGF V + H+A IPI G GINPARS G+A IY D WIF P VGA+ AA+ Y+F+ Sbjct: 29 MAELTKWSFYRAVIAEFIATLLFLYVTVATVIGHKKLNAADHCDGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLLLARKVSLIRAVAYIIAQSLGAICGVGFVKAFMKHYYNLEGGGANFVQ--------PGYNKGTALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKEKIWDDQWIFWVGPFVGALIAAIYYQFV 265
BLAST of NO20G01770 vs. NCBI_GenBank
Match: ADE76283.1 (unknown [Picea sitchensis]) HSP 1 Score: 151.4 bits (381), Expect = 5.000e-33 Identity = 92/240 (38.33%), Postives = 134/240 (55.83%), Query Frame = 0 Query: 63 TFTQSVIAEWWATTLFLFFLILSCLPGANDGQEVFRIGIVA-----GLMITILVYAFYAVSGGNINPAVSLGLALSGRMTAPRAIFYIAAQIIGAITGTAMAKVVSPTAFNLGKGGMNALQVLNVGDDIVTITAGQAFFGEVMGSMLLVLAVLFCTDTARSIEHPHMVALIPVEIGFVVLLCHIALIPIDGCGINPARSIGSAAIYG---SNLDLWIFVWAPVVGAIFAAVTYRFIFSPT 295 +F +++IAE+ AT LFL+ I + + AN + +G + G MI +LVY VSGG+INPAV+ GL ++ +MT RA+FYI AQ +GA+ G M K + ++ G GG N ++ + A E+ G+ +LV V TD + H+ AL P+ +GF V + H+A IPI G GINPARS G+A IYG S D WIF P++GA AA ++++ T Sbjct: 30 SFYRAIIAEFVATLLFLYVTIATVIGNANQKKPCGGVGTLGIAWSFGGMIFVLVYCTAGVSGGHINPAVTFGLFVARKMTLNRAVFYIVAQCLGAVCGAGMVKALQKNYYSAGGGGANTVK--------EGYASETALAAEIAGTFVLVYTVFCATDPKSNARDSHVPALAPLSVGFAVFMVHLATIPITGTGINPARSFGAAVIYGHKKSWNDHWIFWVGPLIGATIAAAFHKYVIRAT 261
BLAST of NO20G01770 vs. NCBI_GenBank
Match: XP_015055154.1 (PREDICTED: aquaporin PIP2-1-like [Solanum pennellii]) HSP 1 Score: 151.4 bits (381), Expect = 5.000e-33 Identity = 97/243 (39.92%), Postives = 139/243 (57.20%), Query Frame = 0 Query: 58 EMSHPTFTQSVIAEWWATTLFLFFLILSCL--PGANDGQEVFRIGIVA-----GLMITILVYAFYAVSGGNINPAVSLGLALSGRMTAPRAIFYIAAQIIGAITGTAMAKVVSPTAFNLGKGGMNALQVLNVGDDIVTITAGQAFFGEVMGSMLLVLAVLFCTDTARSIEHPHMVALIPVEIGFVVLLCHIALIPIDGCGINPARSIGSAAIYGSNL---DLWIFVWAPVVGAIFAAVTYRFI 291 E+ +F +++IAE+ AT LFL+ +L+ + +DG + +GI+ G MI +LVY +SGG+INPAV+ GL L+ +++ RAIFYI AQ +GAI G + K+ + GG N L VG +I T E++G+ +LV V TD R+ H+ L P+ IGF V + H+A IPI G GINPARS G+A IYG N D WIF P +GA AA+ +++I Sbjct: 31 ELGKWSFYRAIIAEFIATLLFLYITVLTVIGYKSQSDGDQCGGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLLLARKVSLVRAIFYIVAQCLGAICGCGLVKLFQKAYYVKYGGGANELA---VGYNIAT-----GLGAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYGKNKSWDDQWIFWVGPFIGAAIAALYHQYI 265
BLAST of NO20G01770 vs. NCBI_GenBank
Match: XP_002884019.1 (probable aquaporin PIP2-8 [Arabidopsis lyrata subsp. lyrata] >EFH60278.1 PIP2_8/PIP3B [Arabidopsis lyrata subsp. lyrata]) HSP 1 Score: 151.0 bits (380), Expect = 6.500e-33 Identity = 97/243 (39.92%), Postives = 136/243 (55.97%), Query Frame = 0 Query: 56 MAEMSHPTFTQSVIAEWWATTLFLFFLILSCLPGAN-----DGQEVFRIGIVAGLMITILVYAFYAVSGGNINPAVSLGLALSGRMTAPRAIFYIAAQIIGAITGTAMAKVVSPTAFNLGKGGMNALQVLNVGDDIVTITAGQAFFGEVMGSMLLVLAVLFCTDTARSIEHPHMVALIPVEIGFVVLLCHIALIPIDGCGINPARSIGSAAIYGSNL---DLWIFVWAPVVGAIFAAVTYRFI 291 MAE+ +F +++IAE+ AT LFL+ + + + N DG + I G MI +LVY +SGG+INPAV+ GL L+ +++ PRA+ Y+ AQ +GAI G + K T + GG N V DD T G A E++G+ +LV V TD RS H+ L P+ IGF V + H+A IPI G GINPARS G+A IY + D WIF P +GA+ AA +++I Sbjct: 26 MAEIKLWSFYRAIIAEFIATLLFLYVTVATVIGHKNQNGPCDGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLPRAVAYMVAQCLGAICGVGLVKAFMMTPYKRLGGGAN-----TVADDYST---GTALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNEKAWDDHWIFWVGPFLGALAAAAYHQYI 260
BLAST of NO20G01770 vs. NCBI_GenBank
Match: NP_001312874.1 (aquaporin PIP2-7-like [Nicotiana tabacum] >XP_009803627.1 PREDICTED: aquaporin PIP2-7-like [Nicotiana sylvestris] >DAA64681.1 TPA_exp: aquaporin PIP2 6b [Nicotiana tabacum]) HSP 1 Score: 151.0 bits (380), Expect = 6.500e-33 Identity = 97/245 (39.59%), Postives = 134/245 (54.69%), Query Frame = 0 Query: 56 MAEMSHPTFTQSVIAEWWATTLFLFFLILSCLPGAN-------DGQEVFRIGIVAGLMITILVYAFYAVSGGNINPAVSLGLALSGRMTAPRAIFYIAAQIIGAITGTAMAKVVSPTAFNLGKGGMNALQVLNVGDDIVTITAGQAFFGEVMGSMLLVLAVLFCTDTARSIEHPHMVALIPVEIGFVVLLCHIALIPIDGCGINPARSIGSAAIYGSNL---DLWIFVWAPVVGAIFAAVTYRFI 291 MAE++ +F ++VIAE+ AT LFL+ + + + DG + I G MI +LVY +SGG+INPAV+LGL L+ +++ RA+ YI AQ +GAI G K +NL GG N +Q G A E++G+ +LV V TD RS H+ L P+ IGF V + H+A IPI G GINPARS G+A IY D WIF P VGA+ AA+ ++F+ Sbjct: 29 MAELTKWSFYRAVIAEFIATLLFLYVTVATVIGHKKLNAADHCDGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKVSLIRAVAYIIAQSLGAICGVGFVKAFMKHYYNLEGGGANFVQ--------PGYNKGTALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKEKIWDDQWIFWVGPFVGALIAAIYHQFV 265
BLAST of NO20G01770 vs. NCBI_GenBank
Match: XP_023767827.1 (aquaporin PIP2-4-like [Lactuca sativa] >XP_023767828.1 aquaporin PIP2-4-like [Lactuca sativa] >PLY82510.1 hypothetical protein LSAT_2X108980 [Lactuca sativa] >PLY82576.1 hypothetical protein LSAT_2X108920 [Lactuca sativa]) HSP 1 Score: 151.0 bits (380), Expect = 6.500e-33 Identity = 98/282 (34.75%), Postives = 149/282 (52.84%), Query Frame = 0 Query: 29 HEANAPGFEAPPTSRKLQSLDDYKQYFMAEMSHPTFTQSVIAEWWATTLFLFFLILSCL------PGANDGQEVFRIGIVA-----GLMITILVYAFYAVSGGNINPAVSLGLALSGRMTAPRAIFYIAAQIIGAITGTAMAKVVSPTAFNLGKGGMNALQVLNVGDDIVTITAGQAFFGEVMGSMLLVLAVLFCTDTARSIEHPHMVALIPVEIGFVVLLCHIALIPIDGCGINPARSIGSAAIYGSNL---DLWIFVWAPVVGAIFAAVTYRFIFSPTEV 297 H+ +A +E PP + + + E++ +F +++IAE+ AT LFL+ +L+ + A+ + +GI+ G MI +LVY +SGG+INPAV+ GL L+ ++T PRA+ YI AQ +GAI G + K T +N GG N L + G E++G+ +LV V TD R+ H+ L P+ IGF V + H+A IPI G GINPARS G+A +YG + D WIF P++GA AA ++++ V Sbjct: 10 HDYSAKDYEDPPPAAFIDA---------EELTKWSFYRAIIAEFIATLLFLYITVLTVIGYKSQTDPAHSSDQCGGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVTLPRAVMYIVAQCLGAICGCGLVKAFQKTYYNTYGGGANEL--------ADGYSKGTGLGAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVMYGKDKAWDDQWIFWVGPMIGAAIAAFYHQYVLRAAAV 274
BLAST of NO20G01770 vs. NCBI_GenBank
Match: XP_023767826.1 (aquaporin PIP2-4-like [Lactuca sativa] >PLY82451.1 hypothetical protein LSAT_2X109001 [Lactuca sativa]) HSP 1 Score: 151.0 bits (380), Expect = 6.500e-33 Identity = 98/282 (34.75%), Postives = 149/282 (52.84%), Query Frame = 0 Query: 29 HEANAPGFEAPPTSRKLQSLDDYKQYFMAEMSHPTFTQSVIAEWWATTLFLFFLILSCL------PGANDGQEVFRIGIVA-----GLMITILVYAFYAVSGGNINPAVSLGLALSGRMTAPRAIFYIAAQIIGAITGTAMAKVVSPTAFNLGKGGMNALQVLNVGDDIVTITAGQAFFGEVMGSMLLVLAVLFCTDTARSIEHPHMVALIPVEIGFVVLLCHIALIPIDGCGINPARSIGSAAIYGSNL---DLWIFVWAPVVGAIFAAVTYRFIFSPTEV 297 H+ +A +E PP + + + E++ +F +++IAE+ AT LFL+ +L+ + A+ + +GI+ G MI +LVY +SGG+INPAV+ GL L+ ++T PRA+ YI AQ +GAI G + K T +N GG N L + G E++G+ +LV V TD R+ H+ L P+ IGF V + H+A IPI G GINPARS G+A +YG + D WIF P++GA AA ++++ V Sbjct: 10 HDYSAKDYEDPPPAAFIDT---------EELTKWSFYRAIIAEFIATLLFLYITVLTVIGYKSQTDPAHSSDQCGGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVTLPRAVMYIVAQCLGAICGCGLVKAFQKTYYNTYGGGANEL--------ADGYSKGTGLGAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVMYGKDKAWDDQWIFWVGPMIGAAIAAFYHQYVLRAAAV 274
BLAST of NO20G01770 vs. NCBI_GenBank
Match: XP_022767345.1 (aquaporin PIP2-2-like [Durio zibethinus]) HSP 1 Score: 150.6 bits (379), Expect = 8.500e-33 Identity = 98/247 (39.68%), Postives = 141/247 (57.09%), Query Frame = 0 Query: 58 EMSHPTFTQSVIAEWWATTLFLFFLIL------SCLPGANDGQEVFRIGIVA-----GLMITILVYAFYAVSGGNINPAVSLGLALSGRMTAPRAIFYIAAQIIGAITGTAMAKVVSPTAFNLGKGGMNALQVLNVGDDIVTITAGQAFFGEVMGSMLLVLAVLFCTDTARSIEHPHMVALIPVEIGFVVLLCHIALIPIDGCGINPARSIGSAAIYGSNL---DLWIFVWAPVVGAIFAAVTYRFI 291 E++ +F ++VIAE+ AT LFL+ +L S + A G++ +GI+ G MI ILVY +SGG+INPAV+ GL L+ +++ RAIFY+AAQ +GAI G + K + + +N GG N+L D T G E++G+ +LV V TD R+ H+ L P+ IGF V + H+A IPI G GINPARS G+A IY + D WIF P +GA AA+ +++I Sbjct: 29 ELTKWSFYRAVIAEFIATLLFLYITVLTVIGYKSQVDTAKGGEDCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLVRAIFYMAAQCLGAICGCGLVKALQKSYYNQYGGGANSL-----ADGYST---GTGLAAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNQDKPWDDQWIFWVGPFIGAAIAAIYHQYI 267 The following BLAST results are available for this feature:
BLAST of NO20G01770 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO20G01770 ID=NO20G01770|Name=NO20G01770|organism=Nannochloropsis oceanica|type=gene|length=3243bpback to top protein sequence of NO20G01770.1 >NO20G01770.1-protein ID=NO20G01770.1-protein|Name=NO20G01770.1|organism=Nannochloropsis oceanica|type=polypeptide|length=327bpback to top Synonyms
Publications
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