NO20G01700, NO20G01700 (gene) Nannochloropsis oceanica

Overview
NameNO20G01700
Unique NameNO20G01700
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2764
Alignment locationchr20:517969..520732 -

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Properties
Property NameValue
DescriptionATP-dependent RNA helicase DDX23/PRP28
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr20genomechr20:517969..520732 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO:0005524ATP binding
GO:0016787hydrolase activity
GO:0003676nucleic acid binding
GO:0000166nucleotide binding
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
IPR014014RNA_helicase_DEAD_Q_motif
IPR011545DEAD/DEAH_box_helicase_dom
IPR001650Helicase_C
IPR014001Helicase_ATP-bd
Homology
BLAST of NO20G01700 vs. NCBI_GenBank
Match: XP_005854357.1 (ATP-dependent RNA helicase DDX23/PRP28 [Nannochloropsis gaditana CCMP526] >EKU21997.1 ATP-dependent RNA helicase DDX23/PRP28 [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 1050.0 bits (2714), Expect = 3.800e-303
Identity = 677/842 (80.40%), Postives = 708/842 (84.09%), Query Frame = 0
Query:    1 MDNGAEEQLRKRAKLERGGEEDGPTPEEAQRIAEIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHKLPPLPTLINGGPPKVEFLTKKQREQLALQKLQEKRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQALKDHYLGKKEVKKRVHKPSEKFARIFQFDWEPSEDTSKDSNPLYNQRLEVTPLFGRGYVAGVDMREQRKMNRYLEALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEARGMEKATIGVLGKHWRDKPLEKMTERDWRIFREDFDISMRVGTQKVLPLRNWEEANLPPALSKTIEGMGWVEPSPIQRAAIPVGLGRRDIIGIAETGSGKTGAFAIPMINYCLTLPAEHRQRTPEEGPLALVMAPTRELAEQIEAQVAILIEGTGLRSCSGVGGKPIEDQAFALRQGVDILIGTPGRLKDLIDSRYLVLNQCNYIVLDEADRMVDMGFEEQVVAVLDMMGGLLKSENEEEADRQAEAAQRGEQLFRVTAMFSATMPLAVERIARSYLRAPATIKIGDANSGKNKRIEQRVIFTTEPGKKKIVVDLLASPKKEDKFIVFVNAKRACDVLARQLEQSHICCGILHGGKSQDQREASLEAFRAGSFTVLVATDVAARGLDIPDVSHIINYDMPAKIENYCHRIGRTGRAGKEGLATTLLTENDSEVFHDLKSYLESTDMKVPPELARHSAAQQAPGTRNEDGKILGQKRDSVMYSKR 843
            +D+G ++  R +  +    +E GP PEEA RIAEI         XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX HKLPPLPTLI GG  +V+FLTKKQREQLALQKLQEKR                                                                                       XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQALKDHYLGKKEVK+RV KPSEKFARIFQFDWE SEDTS+DSNPLYNQRLEVTPLFGRGYVAGVDMREQRK NRYLEAL XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEARGME+ATIGVLG+HWRDK LE MTERDWRIFREDFDISMRVG Q+VLPLRNWEEANLP +L KT+EGMGW EPSPIQRAAIPVG+GRRDIIGIAETGSGKTGAFAIPMINYCLTLPAEHR RTPEEGPLALVMAPTRELAEQIEAQVAILIEGTGL+SCSGVGGKPIEDQAFALR+GVDILIGTPGRLKDLIDSRYLVLNQCNYIVLDEADRMVDMGFEEQVVAVLD MGGLLKSENEEEADRQA+AAQ+GEQL+RVTAMFSATMP AVERIARSYLRAPATIKIG+ANSGKNKRIEQR+IFTTEPGK+K VVDLL SPKKEDKFIVFVNAKRACDVLAR LEQ+ I CGILHGGKSQDQREASLEAFR G FTVLVATDVAARGLDIPDVSH+INYDMPAKIENYCHRIGRTGRAGKEGLATTLLTENDSEVFHDLK+YLESTDMKVPPEL +H+AAQQAPGTRNEDGKI+GQKRDSVMYSKR
Sbjct:   14 VDDGEQQVKRAKMDVREEEKEAGPPPEEALRIAEI--------AXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNHKLPPLPTLIEGGAHEVKFLTKKQREQLALQKLQEKRAAEAPSVKRTGMAMKDVGKGGSAGDGGMGPPRPGSHRDRDGREGSR---------------------------EGGWRDGARGRASDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQALKDHYLGKKEVKRRVVKPSEKFARIFQFDWEASEDTSRDSNPLYNQRLEVTPLFGRGYVAGVDMREQRKTNRYLEALTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEARGMERATIGVLGQHWRDKSLESMTERDWRIFREDFDISMRVGRQRVLPLRNWEEANLPASLRKTVEGMGWKEPSPIQRAAIPVGMGRRDIIGIAETGSGKTGAFAIPMINYCLTLPAEHRTRTPEEGPLALVMAPTRELAEQIEAQVAILIEGTGLKSCSGVGGKPIEDQAFALREGVDILIGTPGRLKDLIDSRYLVLNQCNYIVLDEADRMVDMGFEEQVVAVLDTMGGLLKSENEEEADRQADAAQKGEQLYRVTAMFSATMPPAVERIARSYLRAPATIKIGEANSGKNKRIEQRLIFTTEPGKRKAVVDLLTSPKKEDKFIVFVNAKRACDVLARHLEQTRISCGILHGGKSQDQREASLEAFRNGVFTVLVATDVAARGLDIPDVSHVINYDMPAKIENYCHRIGRTGRAGKEGLATTLLTENDSEVFHDLKNYLESTDMKVPPELGKHAAAQQAPGTRNEDGKIMGQKRDSVMYSKR 820          
BLAST of NO20G01700 vs. NCBI_GenBank
Match: EWM22067.1 (RNA helicase, DEAD-box type [Nannochloropsis gaditana])

HSP 1 Score: 1046.6 bits (2705), Expect = 4.200e-302
Identity = 676/842 (80.29%), Postives = 707/842 (83.97%), Query Frame = 0
Query:    1 MDNGAEEQLRKRAKLERGGEEDGPTPEEAQRIAEIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHKLPPLPTLINGGPPKVEFLTKKQREQLALQKLQEKRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQALKDHYLGKKEVKKRVHKPSEKFARIFQFDWEPSEDTSKDSNPLYNQRLEVTPLFGRGYVAGVDMREQRKMNRYLEALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEARGMEKATIGVLGKHWRDKPLEKMTERDWRIFREDFDISMRVGTQKVLPLRNWEEANLPPALSKTIEGMGWVEPSPIQRAAIPVGLGRRDIIGIAETGSGKTGAFAIPMINYCLTLPAEHRQRTPEEGPLALVMAPTRELAEQIEAQVAILIEGTGLRSCSGVGGKPIEDQAFALRQGVDILIGTPGRLKDLIDSRYLVLNQCNYIVLDEADRMVDMGFEEQVVAVLDMMGGLLKSENEEEADRQAEAAQRGEQLFRVTAMFSATMPLAVERIARSYLRAPATIKIGDANSGKNKRIEQRVIFTTEPGKKKIVVDLLASPKKEDKFIVFVNAKRACDVLARQLEQSHICCGILHGGKSQDQREASLEAFRAGSFTVLVATDVAARGLDIPDVSHIINYDMPAKIENYCHRIGRTGRAGKEGLATTLLTENDSEVFHDLKSYLESTDMKVPPELARHSAAQQAPGTRNEDGKILGQKRDSVMYSKR 843
            +D+G ++  R +  +    +E GP PEEA RIAEI         XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  KLPPLPTLI GG  +V+FLTKKQREQLALQKLQEKR                                                                                       XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQALKDHYLGKKEVK+RV KPSEKFARIFQFDWE SEDTS+DSNPLYNQRLEVTPLFGRGYVAGVDMREQRK NRYLEAL XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEARGME+ATIGVLG+HWRDK LE MTERDWRIFREDFDISMRVG Q+VLPLRNWEEANLP +L KT+EGMGW EPSPIQRAAIPVG+GRRDIIGIAETGSGKTGAFAIPMINYCLTLPAEHR RTPEEGPLALVMAPTRELAEQIEAQVAILIEGTGL+SCSGVGGKPIEDQAFALR+GVDILIGTPGRLKDLIDSRYLVLNQCNYIVLDEADRMVDMGFEEQVVAVLD MGGLLKSENEEEADRQA+AAQ+GEQL+RVTAMFSATMP AVERIARSYLRAPATIKIG+ANSGKNKRIEQR+IFTTEPGK+K VVDLL SPKKEDKFIVFVNAKRACDVLAR LEQ+ I CGILHGGKSQDQREASLEAFR G FTVLVATDVAARGLDIPDVSH+INYDMPAKIENYCHRIGRTGRAGKEGLATTLLTENDSEVFHDLK+YLESTDMKVPPEL +H+AAQQAPGTRNEDGKI+GQKRDSVMYSKR
Sbjct:   14 VDDGEQQVKRAKMDVREEEKEAGPPPEEALRIAEI--------AXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNDKLPPLPTLIEGGAHEVKFLTKKQREQLALQKLQEKRAAEAPSVKRTGMAMKDVGKGGSAGDGGMGPPRPGSHRDRDGREGSR---------------------------EGGWRDGARGRASDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQALKDHYLGKKEVKRRVVKPSEKFARIFQFDWEASEDTSRDSNPLYNQRLEVTPLFGRGYVAGVDMREQRKTNRYLEALTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEARGMERATIGVLGQHWRDKSLESMTERDWRIFREDFDISMRVGRQRVLPLRNWEEANLPASLRKTVEGMGWKEPSPIQRAAIPVGMGRRDIIGIAETGSGKTGAFAIPMINYCLTLPAEHRTRTPEEGPLALVMAPTRELAEQIEAQVAILIEGTGLKSCSGVGGKPIEDQAFALREGVDILIGTPGRLKDLIDSRYLVLNQCNYIVLDEADRMVDMGFEEQVVAVLDTMGGLLKSENEEEADRQADAAQKGEQLYRVTAMFSATMPPAVERIARSYLRAPATIKIGEANSGKNKRIEQRLIFTTEPGKRKAVVDLLTSPKKEDKFIVFVNAKRACDVLARHLEQTRISCGILHGGKSQDQREASLEAFRNGVFTVLVATDVAARGLDIPDVSHVINYDMPAKIENYCHRIGRTGRAGKEGLATTLLTENDSEVFHDLKNYLESTDMKVPPELGKHAAAQQAPGTRNEDGKIMGQKRDSVMYSKR 820          
BLAST of NO20G01700 vs. NCBI_GenBank
Match: GAY05557.1 (Hypothetical protein PINS_013361 [Pythium insidiosum])

HSP 1 Score: 646.4 bits (1666), Expect = 1.300e-181
Identity = 355/631 (56.26%), Postives = 438/631 (69.41%), Query Frame = 0
Query:  236 QALKDHYLGKKEVKKRVHKPSEKFARIFQFDWEPSEDTSKDSNPLYNQRLEVTPLFGRGYVAGVDMREQRKMNRYLEALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEA-RGMEKATIGVLGKHWRDKPLEKMTERDWRIFREDFDISMRVGTQKVLPLRNWEEA-NLPPALSKTIEGMGWVEPSPIQRAAIPVGLGRRDIIGIAETGSGKTGAFAIPMINYCLTLPAEHRQRTPEEGPLALVMAPTRELAEQIEAQVAILIEGTG---------LRSCSGVGGKPIEDQAFALRQGVDILIGTPGRLKDLIDSRYLVLNQCNYIVLDEADRMVDMGFEEQVVAVLDMMGGLLKSENEEEADRQAEAAQRG-EQLFRVTAMFSATMPLAVERIARSYLRAPATIKIGDANSGKNKRIEQRVIFTTEPGKKKIVVDLLAS-------PKKE-----DKFIVFVNAKRACDVLARQLEQSHICCGILHGGKSQDQREASLEAFRAGSFTVLVATDVAARGLDIPDVSHIINYDMPAKIENYCHRIGRTGRAGKEGLATTLLTENDSEVFHDLKSYLESTDMKVPPELARHSAAQQAPGTRNEDGKILGQ-KRDSVMYSK 842
            QA+KD YLGKK  KK+V K SEKFA+IFQFDWE  EDTS + NPLY +R++V  LFGRGY AGVD+REQRK N +L+ L                            XXXXX         +A R + +     +G HW +K LE+MTERDWRIFREDF+I+++ G +   PLR WEEA  LP A+ K ++ +G+  PSPIQ  AIP+GL RRD+IGIAETGSGKT AF IPMI Y   LPA    RT E+GPLALVMAPTRELA QIE +   L + T          +R+ S VGG+ IEDQAF LRQGVDI+IGTPGRL D +++ YLVLNQCNY+VLDEADRM+DMGFE QVVAVL+ MG LLKSENEEE ++Q   A  G +   RVT MFSATMP  VER+A+++LR PA +KIGD +SGKNKRI+QRV+F     KK  +++LL S        +KE      K IVFVN K+ CDV+A+ +        ILHGGKSQDQRE SL+ FR G   +LVATDVA RGLDIPDV+H+INYD+P+KI+NYCHRIGRTGRAGK+G+A + L + D E+ +DLK YL ST+M VP ELA H AA+  PGTR+E G ++G+ KRD+V+++K
Sbjct:  255 QAIKDKYLGKKVQKKKVVKASEKFAKIFQFDWEAGEDTSAELNPLYAKRMDVNLLFGRGYRAGVDLREQRKHNSFLQELAQKRQREQRLADQQNAELTPEEVARRERXXXXXLRNMQARERDAIRELAEREAQTMGTHWSEKALEEMTERDWRIFREDFEITIK-GGRAPKPLRKWEEAQGLPDAVFKAVQALGFERPSPIQMQAIPIGLQRRDVIGIAETGSGKTAAFIIPMIAYLYALPATMIARTGEQGPLALVMAPTRELALQIEQEAIKLCKFTAVGLAEKQHPIRTLSVVGGQSIEDQAFKLRQGVDIIIGTPGRLMDCMENHYLVLNQCNYVVLDEADRMIDMGFEPQVVAVLENMGSLLKSENEEEMEQQLTLAGAGHDHRLRVTTMFSATMPPEVERLAKTFLRHPAIVKIGDEDSGKNKRIDQRVLFMNPAKKKAKLMELLGSFLSGQPRSRKERTTDGSKIIVFVNIKKECDVVAKAISAEGFRSTILHGGKSQDQREESLKQFREGFCDILVATDVAGRGLDIPDVTHVINYDLPSKIQNYCHRIGRTGRAGKDGIAISFLCDQDEEIMYDLKQYLVSTNMPVPSELASHPAAKAPPGTRDEKGNVIGKGKRDTVIFAK 884          
BLAST of NO20G01700 vs. NCBI_GenBank
Match: CCI48109.1 (unnamed protein product [Albugo candida])

HSP 1 Score: 645.6 bits (1664), Expect = 2.200e-181
Identity = 373/636 (58.65%), Postives = 451/636 (70.91%), Query Frame = 0
Query:  235 LQALKDHYLGKKEVKKRVHKPSEKFARIFQFDWEPSEDTSKDSNPLYNQRLEVTPLFGRGYVAGVDMREQRKMNRYLEALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXE-ARGMEKATIGVLGKHWRDKPLEKMTERDWRIFREDFDISMRVGTQKVLPLRNWEEAN-LPPALSKTIEGMGWVEPSPIQRAAIPVGLGRRDIIGIAETGSGKTGAFAIPMINYCLTLPAEHRQRTPEEGPLALVMAPTRELAEQIE---------AQVAILIEGTGLRSCSGVGGKPIEDQAFALRQGVDILIGTPGRLKDLIDSRYLVLNQCNYIVLDEADRMVDMGFEEQVVAVLDMMGGLLKSENEEEADRQAEAAQRGEQL-FRVTAMFSATMPLAVERIARSYLRAPATIKIGDANSGKNKRIEQRVIFTTEPGKKK-----IVVDLLAS------PKKE-----DKFIVFVNAKRACDVLARQLEQSHICCGILHGGKSQDQREASLEAFRAGSFTVLVATDVAARGLDIPDVSHIINYDMPAKIENYCHRIGRTGRAGKEGLATTLLTENDSEVFHDLKSYLESTDMKVPPELARHSAAQQAPGTRNEDGKILGQ-KRDSVMYSK 842
            LQALKD YLGKK  KK++ K SEKFA+IFQFDW+ SEDTS D NP+Y  RL+V  L+GRGY AGVD+REQRK N +L  L                        XXXXXXXXXXXXXXXXXX   + M      + G HW +K LE+M ERDWRIFREDFDI+++ G +   PLRNW+EA+ LP AL + I+ MG+  PSPIQ+ AIP+GL +RDIIGIAETGSGKT AF IP+I Y   LP    +RT E+GPLAL+MAPTRELA QIE          QV ++     +R+ S VGG+ IEDQAF LRQGVDI+IGTPGRL D ++S YLVLNQCNY+VLDEADRM+DMGFE QVV+VL+ MG LLKSENEEE ++Q E A   ++  +RVT MFSATMP  VER+A+++LR PA IKIGD +SGKNKRIEQRV+F    GKKK     ++ + L+S       +KE      K +VFVN K+ CDVL R L Q      ILHGGKSQ+QRE SL  FR G   VLVATDVA RGLD+PDV+H++NYD+P+KIENYCHRIGRTGRAGKEG+A + LT  D E+ +DLK YL ST+M VP ELA H  A+ APG R+E G I+ + KRD+V+Y+K
Sbjct:  157 LQALKDQYLGKKVNKKKIVKASEKFAKIFQFDWDTSEDTSNDLNPVYANRLDVNLLYGRGYRAGVDLREQRKKNSFLNELSLKRQKEHHAADAGNFKLTSEQVEXXXXXXXXXXXXXXXXXXXLIQAMASKEAELTGTHWSEKSLEEMKERDWRIFREDFDITIK-GGRASHPLRNWKEASILPEALFQAIQEMGFERPSPIQKQAIPIGLAKRDIIGIAETGSGKTAAFLIPIIAYLYHLPPAMLERTGEQGPLALIMAPTRELALQIEQEAIKLCKHTQVGVIHSQNRIRTLSVVGGQSIEDQAFKLRQGVDIIIGTPGRLMDCMESHYLVLNQCNYVVLDEADRMIDMGFEPQVVSVLENMGSLLKSENEEEMEQQLERANNAQEFRYRVTMMFSATMPTEVERLAKTFLRHPAIIKIGDEDSGKNKRIEQRVLFLNS-GKKKTRLQHLLHETLSSSGQVRISRKEKVVDGQKVMVFVNIKKECDVLGRYLAQEGFRTTILHGGKSQEQREESLRGFRQGFCDVLVATDVAGRGLDVPDVTHVVNYDLPSKIENYCHRIGRTGRAGKEGVAISFLTNEDEEIMYDLKQYLISTNMPVPQELASHPMAKAAPGARDEKGNIIAKSKRDTVIYAK 790          
BLAST of NO20G01700 vs. NCBI_GenBank
Match: CCA23746.1 (DEAD box helicase putative [Albugo laibachii Nc14])

HSP 1 Score: 642.5 bits (1656), Expect = 1.800e-180
Identity = 377/636 (59.28%), Postives = 452/636 (71.07%), Query Frame = 0
Query:  235 LQALKDHYLGKKEVKKRVHKPSEKFARIFQFDWEPSEDTSKDSNPLYNQRLEVTPLFGRGYVAGVDMREQRKMNRYLEALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXE-ARGMEKATIGVLGKHWRDKPLEKMTERDWRIFREDFDISMRVGTQKVLPLRNWEEAN-LPPALSKTIEGMGWVEPSPIQRAAIPVGLGRRDIIGIAETGSGKTGAFAIPMINYCLTLPAEHRQRTPEEGPLALVMAPTRELAEQIE---------AQVAILIEGTGLRSCSGVGGKPIEDQAFALRQGVDILIGTPGRLKDLIDSRYLVLNQCNYIVLDEADRMVDMGFEEQVVAVLDMMGGLLKSENEEEADRQAEAAQRGEQL-FRVTAMFSATMPLAVERIARSYLRAPATIKIGDANSGKNKRIEQRVIFTTEPGKKK-----IVVDLLAS------PKKE-----DKFIVFVNAKRACDVLARQLEQSHICCGILHGGKSQDQREASLEAFRAGSFTVLVATDVAARGLDIPDVSHIINYDMPAKIENYCHRIGRTGRAGKEGLATTLLTENDSEVFHDLKSYLESTDMKVPPELARHSAAQQAPGTRNEDGKILGQ-KRDSVMYSK 842
            LQALKD YLGKK  KK++ K SEKFA+IFQFDW+ SEDTS D NP+Y  RL+V  L+GRGY AGVD+REQRK N +L  L                     XXXXXXXXXXXXXXXXXXXXX   + M      + G HW +K +++M ERDWRIFREDFDI+++ G +   PLRNW+EA+ LP AL K I+ M +  PSPIQ  AIP+GL +RDIIGIAETGSGKT AF IP+I Y   LPA   +RT E+GPLAL+MAPTRELA QIE          QV ++     +R+ S VGG+ IEDQAF LRQGVDI+IGTPGRL D ++S YLVLNQCNY+VLDEADRM+DMGFE QVVAVLD MG LLKSENEEE ++Q E A   ++  +RVT MFSATMP  VER+A++YLR PA IKIGD +SGKNKRIEQRV+F    GKKK     ++ + L+S       +KE      K +VFVN K+ CDVL + L Q      ILHGGKSQ+QRE SL  FR G   VLVATDVA RGLDIPDV+H++NYD+P+KIENYCHRIGRTGRAGKEG+A + LT  D E+ +DLK YL ST+M VP ELA H  A+ A G R+E G I+ + KRD+V+Y+K
Sbjct:  176 LQALKDQYLGKKVNKKKIVKASEKFAKIFQFDWDTSEDTSNDLNPVYANRLDVNLLYGRGYRAGVDLREQRKKNSFLNELSLKRQKEHHAADAENSTLTSEXXXXXXXXXXXXXXXXXXXXXXLIQAMASKEAELTGTHWTEKSVDEMKERDWRIFREDFDITIK-GGRASHPLRNWKEASLLPEALFKAIQEMRFERPSPIQMQAIPIGLAKRDIIGIAETGSGKTAAFLIPIIAYLYHLPAVMLERTGEQGPLALIMAPTRELALQIEQEAIKLCKHTQVGVVGSQNRIRTLSVVGGQSIEDQAFKLRQGVDIIIGTPGRLMDCMESHYLVLNQCNYVVLDEADRMIDMGFEPQVVAVLDNMGSLLKSENEEEMEKQLERANNAQEFRYRVTMMFSATMPTEVERLAKTYLRHPAIIKIGDEDSGKNKRIEQRVVFLNS-GKKKLRLQHLLHETLSSSGQVRISRKEKVVDGQKVMVFVNIKKECDVLGKYLAQEGFRTTILHGGKSQEQREESLRGFREGFCDVLVATDVAGRGLDIPDVTHVVNYDLPSKIENYCHRIGRTGRAGKEGVAISFLTNEDEEIMYDLKQYLISTNMPVPQELASHPMAKAAAGARDEKGNIIAKSKRDTVIYAK 809          
BLAST of NO20G01700 vs. NCBI_GenBank
Match: CBN78461.1 (DEAD box helicase [Ectocarpus siliculosus])

HSP 1 Score: 637.1 bits (1642), Expect = 7.700e-179
Identity = 327/608 (53.78%), Postives = 428/608 (70.39%), Query Frame = 0
Query:  239 KDHYLGKKEVKKRVHKPSEKFARIFQFDWEPSEDTSKDSNPLYNQRLEVTPLFGRGYVAGVDMREQRKMNRYLEAL-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEARGMEKATIGVLGKHWRDKPLEKMTERDWRIFREDFDISMRVGTQKVLPLRNWEEANLPPALSKTIEGMGWVEPSPIQRAAIPVGLGRRDIIGIAETGSGKTGAFAIPMINYCLTLPAEHRQRTPEEGPLALVMAPTRELAEQIEAQVAILIEGTGLRSCSGVGGKPIEDQAFALRQGVDILIGTPGRLKDLIDSRYLVLNQCNYIVLDEADRMVDMGFEEQVVAVLDMMGGLLKSENEEEA---DRQAEAAQRGEQLFRVTAMFSATMPLAVERIARSYLRAPATIKIGDANSGKNKRIEQRVIFTTEPGKKKIVVDLLASPKKEDKFIVFVNAKRACDVLARQLEQSHICCGILHGGKSQDQREASLEAFRAGSFTVLVATDVAARGLDIPDVSHIINYDMPAKIENYCHRIGRTGRAGKEGLATTLLTENDSEVFHDLKSYLESTDMKVPPELARHSAAQQAPGTRNEDGKILGQKRDSVMYSKR 843
            ++ YLGKK+V            +IFQFDW+ SEDTS+D+NPLYN+R ++   FGRGY+AG+DMREQRK + +L AL                                           EA GM    + + G HW +KPL +M ERDWRIFREDFDI ++ G +  LPLR WEE +LP ++ + I  +G+ +PSPIQR AIP+G+ RRDIIGIAETGSGKT AF IPMI Y L+L A  R R  ++GPLAL+MAPTRELA QIE +     +  GL +   VGG+ IE QAF LR+GV+I+IGTPGRL D ++  YLVLNQCNY+VLDEADRM+DMGFE+QV+AVL+ MGG LK+++ E A   +++A+ A+    L RVTAMFSATMP AVE++A+ YLR PA ++IGD ++GKN+RIEQRV++ TE  KK  V +LL    KED+ +VF+N K++ D+L RQLEQ+    G+LHGGK+QDQRE +LE+FR G +TVLVATDVA+RGLDIPDV  +INY++P KIE YCHRIGRTGRAGK+G+AT+ LTE+D E+   L+ YL+ST+  VP +L +H+AAQ A G R +DG ++  KRD++M+SK+
Sbjct:  408 REQYLGKKKVXXXXXXXXXXXXKIFQFDWDASEDTSRDANPLYNERAQLNASFGRGYLAGIDMREQRKESAFLTALMEKRQEEQRRAEAADHSLTAQDKADRERAREQQMAEVEAFSLAEADGMGDDPV-LKGAHWSEKPLAEMAERDWRIFREDFDIRVK-GGKAPLPLRFWEEGHLPSSVMEAIRELGYEKPSPIQRQAIPIGMERRDIIGIAETGSGKTAAFGIPMIAYILSLEAGMRDRVADQGPLALIMAPTRELAIQIEEECKKFCKFAGLNTVCVVGGQDIEAQAFTLRKGVEIIIGTPGRLNDCVEKHYLVLNQCNYVVLDEADRMIDMGFEDQVLAVLEAMGGTLKADDAELAYKQEKKAKQARSAADLVRVTAMFSATMPAAVEKMAKKYLRHPAIVQIGDEDTGKNRRIEQRVLWMTEAQKKTKVTELLRGHDKEDRVLVFINTKKSADMLGRQLEQAGFPTGVLHGGKTQDQREENLESFRDGDYTVLVATDVASRGLDIPDVK-VINYELPNKIETYCHRIGRTGRAGKDGVATSFLTEHDEEIMFGLREYLQSTESHVPQQLMKHNAAQAAVGARRDDGSLVNSKRDTIMFSKK 1012          
BLAST of NO20G01700 vs. NCBI_GenBank
Match: XP_008914970.1 (hypothetical protein PPTG_18489 [Phytophthora parasitica INRA-310] >ETI31779.1 hypothetical protein F443_21293 [Phytophthora parasitica P1569] >ETM99724.1 hypothetical protein PPTG_18489 [Phytophthora parasitica INRA-310])

HSP 1 Score: 633.3 bits (1632), Expect = 1.100e-177
Identity = 348/643 (54.12%), Postives = 438/643 (68.12%), Query Frame = 0
Query:  235 LQALKDHYLGKKEVKKRVHKPSEKFARIFQFDWEPSEDTSKDSNPLYNQRLEVTPLFGRGYVAGVDMREQRKMNRYLEALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXE-ARGMEKATIGVLGKHWRDKPLEKMTERDWRIFREDFDISMRVGTQKVLPLRNWEEAN--LPPALSKTIEGMGWVEPSPIQRAAIPVGLGRRDIIGIAETGSGKTGAFAIPMINYCLTLPAEHRQRTPEEGPLALVMAPTRELAEQIEAQVAILIEGTG---------LRSCSGVGGKPIEDQAFALRQGVDILIGTPGRLKDLIDSRYLVLNQCNYIVLDEADRMVDMGFEEQVVAVLDMMGGLLKSENEEEADRQ---AEAAQRGEQL---FRVTAMFSATMPLAVERIARSYLRAPATIKIGDANSGKNKRIEQRVIFTTEPGKKK-----IVVDLLAS-------PKKED-----KFIVFVNAKRACDVLARQLEQSHICCGILHGGKSQDQREASLEAFRAGSFTVLVATDVAARGLDIPDVSHIINYDMPAKIENYCHRIGRTGRAGKEGLATTLLTENDSEVFHDLKSYLESTDMKVPPELARHSAAQQAPGTRNEDGKILGQ-KRDSVMYSK 842
            LQALKD YLGK   KK+V K SEKF++IFQFDWE SEDTS D NPLY  R++V  L+GRGY AGVDMREQRK N +LE L                                          +  + M       +G HW +K L++M ERDWRIFREDFDI+++ G +   PLR W EA   LP A+ K I+ +G+  PSPIQ  AIP+GL +RDIIGIAETGSGKT AF IP+I Y  +LPA    RT E+GPLALVMAPTRELA QIE +   L + T          +++ S VGG+ IEDQ F LR+GV+I+IGTPGRL D ++S YLVLNQCNY+VLDEADRM+DMGFE QVVAVL+ MG LLKSENEEE ++Q   A  AQ GE+L    RVT MFSATMP+ VER+A+++LR P+ +KIGD +SGKNKRIEQRV+F   PGKK+     ++ D+L++        +KE      K IVFVN K+ CD +A+ +      C ILHGGK+QDQRE SL+ FR G   +LVATDVA RGLDIPDV+H++N+D+P+KI+NY HRIGRTGRAGK+G+A + LT++D E+ +DLK YL ST+M VP ELA H +A+ APG R+E G ++ + KRD+V+Y+K
Sbjct:  184 LQALKDQYLGKTVKKKKVVKASEKFSKIFQFDWEASEDTSTDLNPLYAHRMDVNLLYGRGYRAGVDMREQRKKNSFLEELSHKRQKEQQLADETDGSLTSEQIAARQQERERALRNMQARERDRIQEMASREAKTMGTHWSEKSLDEMKERDWRIFREDFDITLK-GGRAPNPLRKWSEAGTMLPDAVYKAIKDLGFERPSPIQMQAIPIGLQKRDIIGIAETGSGKTAAFVIPIIAYIYSLPAAMVARTGEQGPLALVMAPTRELALQIEQEAIKLCKYTSVGLPEKMNPIKTLSVVGGQSIEDQGFRLREGVEIIIGTPGRLMDCLESHYLVLNQCNYVVLDEADRMIDMGFEPQVVAVLENMGSLLKSENEEEMEQQLTLANGAQPGEELRHRLRVTTMFSATMPVEVERLAKTFLRHPSIVKIGDEDSGKNKRIEQRVMF-MNPGKKRSKLVEVLRDILSAQNVPVPRSRKEKVVDGAKIIVFVNIKKECDSVAKFISSEGFRCTILHGGKTQDQREESLKMFREGYCDMLVATDVAGRGLDIPDVTHVVNFDLPSKIQNYSHRIGRTGRAGKDGVAISFLTDDDEEIMYDLKQYLVSTEMPVPSELANHPSAKAAPGARDEKGNVIARSKRDTVIYAK 824          
BLAST of NO20G01700 vs. NCBI_GenBank
Match: ETK72147.1 (hypothetical protein L915_20707 [Phytophthora parasitica] >ETL25606.1 hypothetical protein L916_20570 [Phytophthora parasitica] >ETP01598.1 hypothetical protein F441_21192 [Phytophthora parasitica CJ01A1])

HSP 1 Score: 633.3 bits (1632), Expect = 1.100e-177
Identity = 348/643 (54.12%), Postives = 438/643 (68.12%), Query Frame = 0
Query:  235 LQALKDHYLGKKEVKKRVHKPSEKFARIFQFDWEPSEDTSKDSNPLYNQRLEVTPLFGRGYVAGVDMREQRKMNRYLEALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXE-ARGMEKATIGVLGKHWRDKPLEKMTERDWRIFREDFDISMRVGTQKVLPLRNWEEAN--LPPALSKTIEGMGWVEPSPIQRAAIPVGLGRRDIIGIAETGSGKTGAFAIPMINYCLTLPAEHRQRTPEEGPLALVMAPTRELAEQIEAQVAILIEGTG---------LRSCSGVGGKPIEDQAFALRQGVDILIGTPGRLKDLIDSRYLVLNQCNYIVLDEADRMVDMGFEEQVVAVLDMMGGLLKSENEEEADRQ---AEAAQRGEQL---FRVTAMFSATMPLAVERIARSYLRAPATIKIGDANSGKNKRIEQRVIFTTEPGKKK-----IVVDLLAS-------PKKED-----KFIVFVNAKRACDVLARQLEQSHICCGILHGGKSQDQREASLEAFRAGSFTVLVATDVAARGLDIPDVSHIINYDMPAKIENYCHRIGRTGRAGKEGLATTLLTENDSEVFHDLKSYLESTDMKVPPELARHSAAQQAPGTRNEDGKILGQ-KRDSVMYSK 842
            LQALKD YLGK   KK+V K SEKF++IFQFDWE SEDTS D NPLY  R++V  L+GRGY AGVDMREQRK N +LE L                                          +  + M       +G HW +K L++M ERDWRIFREDFDI+++ G +   PLR W EA   LP A+ K I+ +G+  PSPIQ  AIP+GL +RDIIGIAETGSGKT AF IP+I Y  +LPA    RT E+GPLALVMAPTRELA QIE +   L + T          +++ S VGG+ IEDQ F LR+GV+I+IGTPGRL D ++S YLVLNQCNY+VLDEADRM+DMGFE QVVAVL+ MG LLKSENEEE ++Q   A  AQ GE+L    RVT MFSATMP+ VER+A+++LR P+ +KIGD +SGKNKRIEQRV+F   PGKK+     ++ D+L++        +KE      K IVFVN K+ CD +A+ +      C ILHGGK+QDQRE SL+ FR G   +LVATDVA RGLDIPDV+H++N+D+P+KI+NY HRIGRTGRAGK+G+A + LT++D E+ +DLK YL ST+M VP ELA H +A+ APG R+E G ++ + KRD+V+Y+K
Sbjct:  184 LQALKDQYLGKTVKKKKVVKASEKFSKIFQFDWEASEDTSTDLNPLYAHRMDVNLLYGRGYRAGVDMREQRKKNSFLEELSHKRQKEQQLADETDGSLTSEQIAARQQERERALRNMQARERDRIQEMASREAKTMGTHWSEKSLDEMKERDWRIFREDFDITLK-GGRAPNPLRKWSEAGTMLPDAVYKAIKDLGFERPSPIQMQAIPIGLQKRDIIGIAETGSGKTAAFVIPIIAYIYSLPAAMVARTGEQGPLALVMAPTRELALQIEQEAIKLCKYTSVGLPEKMNPIKTLSVVGGQSIEDQGFRLREGVEIIIGTPGRLMDCLESHYLVLNQCNYVVLDEADRMIDMGFEPQVVAVLENMGSLLKSENEEEMEQQLTLANGAQPGEELRHRLRVTTMFSATMPVEVERLAKTFLRHPSIVKIGDEDSGKNKRIEQRVMF-MNPGKKRSKLVEVLRDILSAQNVPVPRSRKEKVVDGAKIIVFVNIKKECDSVAKFISSEGFRCTILHGGKTQDQREESLKMFREGYCDMLVATDVAGRGLDIPDVTHVVNFDLPSKIQNYSHRIGRTGRAGKDGVAISFLTDDDEEIMYDLKQYLVSTEMPVPSELANHPSAKAAPGARDEKGNVIARSKRDTVIYAK 824          
BLAST of NO20G01700 vs. NCBI_GenBank
Match: ETL78815.1 (hypothetical protein L917_20439 [Phytophthora parasitica])

HSP 1 Score: 633.3 bits (1632), Expect = 1.100e-177
Identity = 348/643 (54.12%), Postives = 438/643 (68.12%), Query Frame = 0
Query:  235 LQALKDHYLGKKEVKKRVHKPSEKFARIFQFDWEPSEDTSKDSNPLYNQRLEVTPLFGRGYVAGVDMREQRKMNRYLEALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXE-ARGMEKATIGVLGKHWRDKPLEKMTERDWRIFREDFDISMRVGTQKVLPLRNWEEAN--LPPALSKTIEGMGWVEPSPIQRAAIPVGLGRRDIIGIAETGSGKTGAFAIPMINYCLTLPAEHRQRTPEEGPLALVMAPTRELAEQIEAQVAILIEGTG---------LRSCSGVGGKPIEDQAFALRQGVDILIGTPGRLKDLIDSRYLVLNQCNYIVLDEADRMVDMGFEEQVVAVLDMMGGLLKSENEEEADRQ---AEAAQRGEQL---FRVTAMFSATMPLAVERIARSYLRAPATIKIGDANSGKNKRIEQRVIFTTEPGKKK-----IVVDLLAS-------PKKED-----KFIVFVNAKRACDVLARQLEQSHICCGILHGGKSQDQREASLEAFRAGSFTVLVATDVAARGLDIPDVSHIINYDMPAKIENYCHRIGRTGRAGKEGLATTLLTENDSEVFHDLKSYLESTDMKVPPELARHSAAQQAPGTRNEDGKILGQ-KRDSVMYSK 842
            LQALKD YLGK   KK+V K SEKF++IFQFDWE SEDTS D NPLY  R++V  L+GRGY AGVDMREQRK N +LE L                                          +  + M       +G HW +K L++M ERDWRIFREDFDI+++ G +   PLR W EA   LP A+ K I+ +G+  PSPIQ  AIP+GL +RDIIGIAETGSGKT AF IP+I Y  +LPA    RT E+GPLALVMAPTRELA QIE +   L + T          +++ S VGG+ IEDQ F LR+GV+I+IGTPGRL D ++S YLVLNQCNY+VLDEADRM+DMGFE QVVAVL+ MG LLKSENEEE ++Q   A  AQ GE+L    RVT MFSATMP+ VER+A+++LR P+ +KIGD +SGKNKRIEQRV+F   PGKK+     ++ D+L++        +KE      K IVFVN K+ CD +A+ +      C ILHGGK+QDQRE SL+ FR G   +LVATDVA RGLDIPDV+H++N+D+P+KI+NY HRIGRTGRAGK+G+A + LT++D E+ +DLK YL ST+M VP ELA H +A+ APG R+E G ++ + KRD+V+Y+K
Sbjct:  184 LQALKDQYLGKTVKKKKVVKASEKFSKIFQFDWEASEDTSTDLNPLYAHRMDVNLLYGRGYRAGVDMREQRKKNSFLEELSHKRQKEQQLADETDGSLTSEQIAARQQERERALRNMQARERDRIQEMASREAKTMGTHWSEKSLDEMKERDWRIFREDFDITLK-GGRAPNPLRKWSEAGTMLPDAVYKAIKDLGFERPSPIQMQAIPIGLQKRDIIGIAETGSGKTAAFVIPIIAYIYSLPAAMVARTGEQGPLALVMAPTRELALQIEQEAIKLCKYTSVGLPEKMNPIKTLSVVGGQSIEDQGFRLREGVEIIIGTPGRLMDCLESHYLVLNQCNYVVLDEADRMIDMGFEPQVVAVLENMGSLLKSENEEEMEQQLTLANGAQPGEELRHRLRVTTMFSATMPVEVERLAKTFLRHPSIVKIGDEDSGKNKRIEQRVMF-MNPGKKRSKLVEVLRDILSAQNVPVPRSRKEKVVDGAKIIVFVNIKKECDSVAKFISSEGFRCTILHGGKTQDQREESLKMFREGYCDMLVATDVAGRGLDIPDVTHVVNFDLPSKIQNYSHRIGRTGRAGKDGVAISFLTDDDEEIMYDLKQYLVSTEMPVPSELANHPSAKAAPGARDEKGNVIARSKRDTVIYAK 824          
BLAST of NO20G01700 vs. NCBI_GenBank
Match: ETM32086.1 (hypothetical protein L914_20444 [Phytophthora parasitica] >ETO60498.1 hypothetical protein F444_21311 [Phytophthora parasitica P1976] >ETP29752.1 hypothetical protein F442_21129 [Phytophthora parasitica P10297])

HSP 1 Score: 633.3 bits (1632), Expect = 1.100e-177
Identity = 348/643 (54.12%), Postives = 438/643 (68.12%), Query Frame = 0
Query:  235 LQALKDHYLGKKEVKKRVHKPSEKFARIFQFDWEPSEDTSKDSNPLYNQRLEVTPLFGRGYVAGVDMREQRKMNRYLEALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXE-ARGMEKATIGVLGKHWRDKPLEKMTERDWRIFREDFDISMRVGTQKVLPLRNWEEAN--LPPALSKTIEGMGWVEPSPIQRAAIPVGLGRRDIIGIAETGSGKTGAFAIPMINYCLTLPAEHRQRTPEEGPLALVMAPTRELAEQIEAQVAILIEGTG---------LRSCSGVGGKPIEDQAFALRQGVDILIGTPGRLKDLIDSRYLVLNQCNYIVLDEADRMVDMGFEEQVVAVLDMMGGLLKSENEEEADRQ---AEAAQRGEQL---FRVTAMFSATMPLAVERIARSYLRAPATIKIGDANSGKNKRIEQRVIFTTEPGKKK-----IVVDLLAS-------PKKED-----KFIVFVNAKRACDVLARQLEQSHICCGILHGGKSQDQREASLEAFRAGSFTVLVATDVAARGLDIPDVSHIINYDMPAKIENYCHRIGRTGRAGKEGLATTLLTENDSEVFHDLKSYLESTDMKVPPELARHSAAQQAPGTRNEDGKILGQ-KRDSVMYSK 842
            LQALKD YLGK   KK+V K SEKF++IFQFDWE SEDTS D NPLY  R++V  L+GRGY AGVDMREQRK N +LE L                                          +  + M       +G HW +K L++M ERDWRIFREDFDI+++ G +   PLR W EA   LP A+ K I+ +G+  PSPIQ  AIP+GL +RDIIGIAETGSGKT AF IP+I Y  +LPA    RT E+GPLALVMAPTRELA QIE +   L + T          +++ S VGG+ IEDQ F LR+GV+I+IGTPGRL D ++S YLVLNQCNY+VLDEADRM+DMGFE QVVAVL+ MG LLKSENEEE ++Q   A  AQ GE+L    RVT MFSATMP+ VER+A+++LR P+ +KIGD +SGKNKRIEQRV+F   PGKK+     ++ D+L++        +KE      K IVFVN K+ CD +A+ +      C ILHGGK+QDQRE SL+ FR G   +LVATDVA RGLDIPDV+H++N+D+P+KI+NY HRIGRTGRAGK+G+A + LT++D E+ +DLK YL ST+M VP ELA H +A+ APG R+E G ++ + KRD+V+Y+K
Sbjct:  184 LQALKDQYLGKTVKKKKVVKASEKFSKIFQFDWEASEDTSTDLNPLYAHRMDVNLLYGRGYRAGVDMREQRKKNSFLEELSHKRQKEQQLADETDGSLTSEQIAARQQERERALRNMQARERDRIQEMASREAKTMGTHWSEKSLDEMKERDWRIFREDFDITLK-GGRAPNPLRKWSEAGTMLPDAVYKAIKDLGFERPSPIQMQAIPIGLQKRDIIGIAETGSGKTAAFVIPIIAYIYSLPAAMVARTGEQGPLALVMAPTRELALQIEQEAIKLCKYTSVGLPEKMNPIKTLSVVGGQSIEDQGFRLREGVEIIIGTPGRLMDCLESHYLVLNQCNYVVLDEADRMIDMGFEPQVVAVLENMGSLLKSENEEEMEQQLTLANGAQPGEELRHRLRVTTMFSATMPVEVERLAKTFLRHPSIVKIGDEDSGKNKRIEQRVMF-MNPGKKRSKLVEVLRDILSAQNVPVPRSRKEKVVDGAKIIVFVNIKKECDSVAKFISSEGFRCTILHGGKTQDQREESLKMFREGYCDMLVATDVAGRGLDIPDVTHVVNFDLPSKIQNYSHRIGRTGRAGKDGVAISFLTDDDEEIMYDLKQYLVSTEMPVPSELANHPSAKAAPGARDEKGNVIARSKRDTVIYAK 824          
The following BLAST results are available for this feature:
BLAST of NO20G01700 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_005854357.13.800e-30380.40ATP-dependent RNA helicase DDX23/PRP28 [Nannochlor... [more]
EWM22067.14.200e-30280.29RNA helicase, DEAD-box type [Nannochloropsis gadit... [more]
GAY05557.11.300e-18156.26Hypothetical protein PINS_013361 [Pythium insidios... [more]
CCI48109.12.200e-18158.65unnamed protein product [Albugo candida][more]
CCA23746.11.800e-18059.28DEAD box helicase putative [Albugo laibachii Nc14][more]
CBN78461.17.700e-17953.78DEAD box helicase [Ectocarpus siliculosus][more]
XP_008914970.11.100e-17754.12hypothetical protein PPTG_18489 [Phytophthora para... [more]
ETK72147.11.100e-17754.12hypothetical protein L915_20707 [Phytophthora para... [more]
ETL78815.11.100e-17754.12hypothetical protein L917_20439 [Phytophthora para... [more]
ETM32086.11.100e-17754.12hypothetical protein L914_20444 [Phytophthora para... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL023nonsL023Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL021nonsL021Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR020ncniR020Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR067ngnoR067Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK002704NSK002704Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO20G01700.1NO20G01700.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|557310gene_6388Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100244g7gene8369Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO20G01700.1NO20G01700.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO20G01700 ID=NO20G01700|Name=NO20G01700|organism=Nannochloropsis oceanica|type=gene|length=2764bp
CGACAGCGCTCCACATAAATACAGAGACGCGAGCGCGAGAACCGGCACGG
GAATCACCACATGGACAACGGGGCTGAGGAACAACTCCGGAAGCGGGCCA
AGCTGGAGAGAGGGGGGGAGGAAGACGGCCCCACGCCCGAGGAAGCACAG
CGCATCGCAGAGATTGCCGCACGGGCCGAAGCCAGGGCTGCGGCCAGGGC
AGCAGCGGTAGCAGCAGCACCAGCAGGAGCGGGAGCAGCTGCAGCAGGAG
GAGGCGATAATGGTGGTGGTGTAGTAGGCGGAGGTGGTAATGTCAATCAC
AAACTGCCTCCGTTGCCAACGCTGATTAATGGCGGCCCACCCAAGGTTGA
GTTTCTGACAAAGAAGCAACGGGAGCAGTTAGCTTTGCAGAAGCTGCAGG
AGAAGCGAGCCGGTGCCAACACGGGCAATGGCAGCAATAGTAAGCCATCC
TCTTCCTCCTCCTTCTTATCGGCGTCCTCTTCGTCTGGCTTTGCACGGAG
CAGCCGCAGCATGTATGGTGGAGGAGGAGATGGGGGACGAGACTACCGAG
ACAATAGTAACACAAGAGAACGTAGCCGTGACCGTGATGGGGGGAGGGAT
GGAGGGAGGGAGAGGATTCGGGATGGAGGTGGAGGAGGAGGAGGAGGAGG
AAGAGGAGGCAGGGATGATCGTGATTATCGAGGGGGAGGAGGAAGGGGGG
GAGGAAGCCTGAGTAGGGAGGAGAGGGAGAAGGAGCGTTTGGAGAGACAG
CGACAAGAGGAGCTGCAGGCATTGAAGGACCACTACCTGGGGAAGAAAGA
AGTGAAGAAGCGGGTGCATAAGCCGAGTGAGAAATTTGCGCGGATTTTTC
AATTCGATTGGGAGCCGTCTGAGGATACGAGCAAGGACTCAAATCCTCTT
TACAATCAGCGGCTGGAGGTCACGCCGCTTTTTGGGAGGGGTTATGTGGC
TGGGGTGGATATGAGGGAGCAACGGAAAATGAATCGGTACTTGGAAGCGT
TGACGCTGAAGAGGCAGGAGGAGGAGAGGAGGGCGGAGGAGACAATGGGG
GTGAGTAGGGGGGATCGGAAGAGTAAGGAGGAGGAGAGGCAAAGTCTGGT
AGATGATATGCGGAGGAGGAGGGAGATGGAGGCGCGGGGGATGGAGAAGG
CGACGATTGGCGTATTGGGAAAGCACTGGAGAGATAAGCCGTTGGAGAAG
ATGACGGAAAGGGACTGGCGAATTTTCCGGGAGGACTTTGATATCTCGAT
GCGGGTAGGGACCCAGAAGGTCTTGCCTTTGCGTAATTGGGAAGAGGCAA
ACTTGCCCCCGGCGCTGTCAAAGACCATCGAGGGGATGGGATGGGTGGAG
CCATCGCCCATTCAGAGGGCGGCCATACCCGTAGGGTTGGGGAGGAGGGA
TATCATCGGTATTGCCGAGACGGGCTCAGGAAAGACAGGGGCATTTGCGA
TTCCGATGATTAATTATTGTTTGACTTTGCCCGCCGAGCACAGACAGAGA
ACACCGGAAGAAGGCCCTCTGGCACTGGTCATGGCGCCAACGCGAGAGCT
GGCCGAGCAGATTGAGGCGCAGGTGGCGATTTTGATCGAGGGGACGGGGC
TGAGGAGTTGCTCAGGGGTGGGAGGAAAGCCGATAGAGGATCAGGCGTTT
GCGTTGAGGCAGGGAGTGGATATTCTGATCGGCACCCCGGGGCGGCTGAA
GGATTTGATCGATTCGCGTTATCTGGTGCTGAACCAGTGCAATTATATCG
TGCTGGATGAGGCGGATCGGATGGTGGATATGGGATTTGAAGAGCAGGTG
GTGGCGGTGCTTGATATGATGGGGGGGTTGTTGAAGTCTGAGAATGAGGA
GGAGGCGGATAGGCAGGCGGAGGCGGCACAGAGGGGAGAGCAGTTGTTCA
GGGTGACGGCAATGTTCAGTGCGACGATGCCCTTGGCGGTGGAGAGGATT
GCCAGGTCTTATCTGAGGGCGCCGGCGACGATCAAAATTGGGGATGCAAA
CAGCGGCAAGAATAAGAGGATCGAGCAGAGGGTGATTTTTACCACAGAGC
CCGGAAAGAAGAAGATTGTCGTGGATCTGCTGGCGAGTCCAAAGAAGGAG
GATAAGTTTATTGTCTTCGTCAATGCCAAGAGGGCGTGTGACGTCCTTGC
GCGGCAGCTAGAACAATCCCATATTTGTTGCGGAATCCTCCACGGTGGGA
AGAGCCAGGACCAGAGAGAAGCGTCCCTGGAGGCCTTCCGGGCTGGTTCC
TTCACGGTGCTGGTCGCGACTGATGTGGCGGCGCGTGGTCTGGATATCCC
CGATGTTTCTCACATCATCAATTACGACATGCCTGCCAAGATTGAGAATT
ATTGCCATCGCATCGGGAGGACAGGTCGAGCAGGAAAGGAAGGGCTGGCG
ACGACGCTGCTCACAGAGAATGACAGCGAAGTGTTTCACGACTTGAAGTC
CTACCTGGAGTCCACCGACATGAAGGTCCCGCCCGAGTTGGCTCGACACT
CGGCGGCGCAGCAGGCCCCGGGTACGAGAAATGAGGATGGGAAGATTTTG
GGGCAGAAGAGGGATAGTGTCATGTACTCCAAGCGGTGAGGGAGAGGGGG
TGCGGGGAGGGTGTTTGGGGAGGGAGGATGCTAGGGGGCGGAGAAAAAGA
CTTAAAACGAAGAAGTAAATAAAAAGCAGCCGCCAGGATGGACGAATGGA
ATATAAAATGCACTCAAAGGCTCCTTGGTAACTAGAGATTGAAGACCCGA
AAGCAAGAACAACA
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protein sequence of NO20G01700.1

>NO20G01700.1-protein ID=NO20G01700.1-protein|Name=NO20G01700.1|organism=Nannochloropsis oceanica|type=polypeptide|length=843bp
MDNGAEEQLRKRAKLERGGEEDGPTPEEAQRIAEIAARAEARAAARAAAV
AAAPAGAGAAAAGGGDNGGGVVGGGGNVNHKLPPLPTLINGGPPKVEFLT
KKQREQLALQKLQEKRAGANTGNGSNSKPSSSSSFLSASSSSGFARSSRS
MYGGGGDGGRDYRDNSNTRERSRDRDGGRDGGRERIRDGGGGGGGGGRGG
RDDRDYRGGGGRGGGSLSREEREKERLERQRQEELQALKDHYLGKKEVKK
RVHKPSEKFARIFQFDWEPSEDTSKDSNPLYNQRLEVTPLFGRGYVAGVD
MREQRKMNRYLEALTLKRQEEERRAEETMGVSRGDRKSKEEERQSLVDDM
RRRREMEARGMEKATIGVLGKHWRDKPLEKMTERDWRIFREDFDISMRVG
TQKVLPLRNWEEANLPPALSKTIEGMGWVEPSPIQRAAIPVGLGRRDIIG
IAETGSGKTGAFAIPMINYCLTLPAEHRQRTPEEGPLALVMAPTRELAEQ
IEAQVAILIEGTGLRSCSGVGGKPIEDQAFALRQGVDILIGTPGRLKDLI
DSRYLVLNQCNYIVLDEADRMVDMGFEEQVVAVLDMMGGLLKSENEEEAD
RQAEAAQRGEQLFRVTAMFSATMPLAVERIARSYLRAPATIKIGDANSGK
NKRIEQRVIFTTEPGKKKIVVDLLASPKKEDKFIVFVNAKRACDVLARQL
EQSHICCGILHGGKSQDQREASLEAFRAGSFTVLVATDVAARGLDIPDVS
HIINYDMPAKIENYCHRIGRTGRAGKEGLATTLLTENDSEVFHDLKSYLE
STDMKVPPELARHSAAQQAPGTRNEDGKILGQKRDSVMYSKR*
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Synonyms
Publications