jgi.p|Nanoce1779_2|557310, gene_6388 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|557310
Unique Namegene_6388
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_15:517433..520044 -

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Properties
Property NameValue
TranscriptId557396
ProteinId557310
Product nameDEAD box helicase putative
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_15supercontigscaffold_15:517433..520044 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0004386helicase activity
GO:0003676nucleic acid binding
GO:0005524ATP binding
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL020ncniL020Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO20G01700NO20G01700Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|557310mRNA_6388-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|557310mRNA_6388Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|557310

>mRNA_6388-protein ID=mRNA_6388-protein|Name=jgi.p|Nanoce1779_2|557310|organism=Nannochloropsis oceanica|type=polypeptide|length=803bp
MDNGAEEQLRKRAKLERGGEEDGPTPEEAQRIAEIAARAEARAAARAAAV
AAAPAGAGAAAAGGGDNGGGVVGGGGNVNHKLPPLPTLINGGPPKVEFLT
KKQREQLALQKLQEKRAGANTGNGSNSKPSSSSSFLSASSSSGFARSSRS
MYGGGGDGGRDYRDNSNTRERSRDRSLSREEREKERLERQRQEELQALKD
HYLGKKEVKKRVHKPSEKFARIFQFDWEPSEDTSKDSNPLYNQRLEVTPL
FGRGYVAGVDMREQRKMNRYLEALTLKRQEEERRAEETMGVSRGDRKSKE
EERQSLVDDMRRRREMEARGMEKATIGVLGKHWRDKPLEKMTERDWRIFR
EDFDISMRVGTQKVLPLRNWEEANLPPALSKTIEGMGWVEPSPIQRAAIP
VGLGRRDIIGIAETGSGKTGAFAIPMINYCLTLPAEHRQRTPEEGPLALV
MAPTRELAEQIEAQVAILIEGTGLRSCSGVGGKPIEDQAFALRQGVDILI
GTPGRLKDLIDSRYLVLNQCNYIVLDEADRMVDMGFEEQVVAVLDMMGGL
LKSENEEEADRQAEAAQRGEQLFRVTAMFSATMPLAVERIARSYLRAPAT
IKIGDANSGKNKRIEQRVIFTTEPGKKKIVVDLLASPKKEDKFIVFVNAK
RACDVLARQLEQSHICCGILHGGKSQDQREASLEAFRAGSFTVLVATDVA
ARGLDIPDVSHIINYDMPAKIENYCHRIGRTGRAGKEGLATTLLTENDSE
VFHDLKSYLESTDMKVPPELARHSAAQQAPGTRNEDGKILGQKRDSVMYS
KR*
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Synonyms
Publications