NO20G01610, NO20G01610 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO20G01610 vs. NCBI_GenBank
Match: XP_005852729.1 (glycine hydroxymethyltransferase [Nannochloropsis gaditana CCMP526] >EKU23102.1 glycine hydroxymethyltransferase [Nannochloropsis gaditana CCMP526] >EWM22099.1 serine hydroxymethyltransferase [Nannochloropsis gaditana]) HSP 1 Score: 886.7 bits (2290), Expect = 3.200e-254 Identity = 442/490 (90.20%), Postives = 465/490 (94.90%), Query Frame = 0 Query: 1 MLLRHGSKKLSVMPRLTSMIRSITSETKSWATALNEPLVKTDPDLYAIIEQEKIRQQESLVLIASENFTSKSVFDALGSVMSNKYSEGYPAARYYGGNENIDKVESLCQKRALDAFGLDPKEWGVNVQTLSGSPANFQAYTAVLAPHDRIMALDLPHGGHLSHGYQTDSKKISAVSIFFETFPYRLDESTGRIDYDKMEENAALFRPKLLVAGASAYARTIDYERMRKIADKHNAYLLSDMAHISGLVAAGVIPSPFPHSDIVTTTTHKSLRGPRGAMIFYRKGVRKVTKKGVEIPYDLEEKINFAVFPGLQGGPHNHTIAALATALKQVATPEFKKYQEQVLKNSARLADTLLKAGYSLVSGGTDNHLVLVDLKPQQVDGARVERVMELANMAANKNTVPGDRSALTPGGIRIGCPALTSRGFTEEDFEQVGHFFDRSVKIAQAIKKETGPKIKDFKEALKDGPGKYGEVTKLKEDVVAFAKKFPTVGF 491 M LR GS L++ R+ ++RSITSETKSWAT+LNEPL TDPDL+AIIEQEK+RQ+ESLVLIASENFTSKSVFDALGSVMSNKYSEGYP ARYYGGNENIDKVESLCQ+RAL AF LDP WGVNVQTLSGSPANFQAYTAVLAPHDRIMALDLPHGGHLSHGYQTDSKKISAVSIFFETFPYRLDE TGRIDYDKMEENAALFRPKLLVAGASAYARTIDYERMRKIADKHNAYLLSDMAHISGLVAAG IPSPFPHSDIVTTTTHKSLRGPRGAMIFYRKGVR+VTKKGVEIPYDLEEKINFAVFPGLQGGPHNHTIAALATALKQ A+PEFKKYQEQVL+NS RLA+TL KAGYSLVSGGTDNHLVLVDLKPQQVDGARVERVMELANMAANKNTVPGD+SALTPGGIRIGCPALTSRGFTEEDFEQVGHFFDR+VKIAQ IK+ETGPKIKDFKEAL++GPGK+ + LK+DVVAFA+KFPTVGF Sbjct: 5 MFLRRGSNTLALGRRM-PILRSITSETKSWATSLNEPLKTTDPDLHAIIEQEKVRQRESLVLIASENFTSKSVFDALGSVMSNKYSEGYPGARYYGGNENIDKVESLCQQRALAAFNLDPARWGVNVQTLSGSPANFQAYTAVLAPHDRIMALDLPHGGHLSHGYQTDSKKISAVSIFFETFPYRLDERTGRIDYDKMEENAALFRPKLLVAGASAYARTIDYERMRKIADKHNAYLLSDMAHISGLVAAGAIPSPFPHSDIVTTTTHKSLRGPRGAMIFYRKGVRRVTKKGVEIPYDLEEKINFAVFPGLQGGPHNHTIAALATALKQAASPEFKKYQEQVLQNSKRLAETLTKAGYSLVSGGTDNHLVLVDLKPQQVDGARVERVMELANMAANKNTVPGDKSALTPGGIRIGCPALTSRGFTEEDFEQVGHFFDRAVKIAQEIKRETGPKIKDFKEALREGPGKHQALVDLKKDVVAFAQKFPTVGF 493
BLAST of NO20G01610 vs. NCBI_GenBank
Match: CBN75444.1 (serine hydroxymethyltransferase 2 [Ectocarpus siliculosus]) HSP 1 Score: 724.2 bits (1868), Expect = 2.800e-205 Identity = 353/471 (74.95%), Postives = 406/471 (86.20%), Query Frame = 0 Query: 21 RSITSETKSWATALNEPLVKTDPDLYAIIEQEKIRQQESLVLIASENFTSKSVFDALGSVMSNKYSEGYPAARYYGGNENIDKVESLCQKRALDAFGLDPKEWGVNVQTLSGSPANFQAYTAVLAPHDRIMALDLPHGGHLSHGYQTDSKKISAVSIFFETFPYRLDESTGRIDYDKMEENAALFRPKLLVAGASAYARTIDYERMRKIADKHNAYLLSDMAHISGLVAAGVIPSPFPHSDIVTTTTHKSLRGPRGAMIFYRKGVRKVTKKGVEIPYDLEEKINFAVFPGLQGGPHNHTIAALATALKQVATPEFKKYQEQVLKNSARLADTLLKAGYSLVSGGTDNHLVLVDL-KPQQVDGARVERVMELANMAANKNTVPGDRSALTPGGIRIGCPALTSRGFTEEDFEQVGHFFDRSVKIAQAIKKETGPKIKDFKEALKDGPGKYGEVTKLKEDVVAFAKKFPTVGF 491 R ITSET+SWA A+N+PL +TDPDL+ I+E EK+RQ++SLVLIASENFTSKSV+DALGS+MSNKYSEGYP ARYYGGNE IDKVESLCQKRAL+AF LDP+ WGVNVQTLSGSPANFQAYTAVL PHDRIM+LDLPHGGHLSHGYQTD+KKIS VS F+ETFPYRLDESTG+IDYD M NA LFRPKL+VAGASAY+R IDY RM+++AD A+LLSDMAHISGLV+AGV+PSPFP+SDIVTTTTHKSLRGPRGAMIFYRKG R TKKG I YD+E KINF+VFPGLQGGPHNHTIAALATALKQ PE+ YQ+QV+KNSA +A+ L+ GY LVSGGTDNHLVLVDL K +DGARVE ++E+ NMA NKNTVPGD+SALTPGGIR+G PALTSRGFTEEDFEQV FF R V +A+ + +TG KIK ++EAL DG KY E+ +L++D+ FA+ FP +GF Sbjct: 12 RGITSETRSWALAMNKPLEETDPDLFDIMEHEKVRQRDSLVLIASENFTSKSVYDALGSIMSNKYSEGYPGARYYGGNEQIDKVESLCQKRALEAFDLDPELWGVNVQTLSGSPANFQAYTAVLQPHDRIMSLDLPHGGHLSHGYQTDTKKISMVSSFYETFPYRLDESTGQIDYDTMAANAKLFRPKLIVAGASAYSRNIDYARMKEVADASGAWLLSDMAHISGLVSAGVVPSPFPYSDIVTTTTHKSLRGPRGAMIFYRKGQRGTTKKGEPIMYDIESKINFSVFPGLQGGPHNHTIAALATALKQAKAPEYVAYQKQVVKNSAAMAEKLIADGYQLVSGGTDNHLVLVDLKKSSNIDGARVELMLEVVNMATNKNTVPGDKSALTPGGIRMGAPALTSRGFTEEDFEQVAAFFHRGVTLAKKVAADTG-KIKAYREALADGGSKYPEIKQLRDDINNFARTFPVIGF 481
BLAST of NO20G01610 vs. NCBI_GenBank
Match: XP_024393527.1 (serine hydroxymethyltransferase 1, mitochondrial-like [Physcomitrella patens] >PNR40866.1 hypothetical protein PHYPA_018269 [Physcomitrella patens]) HSP 1 Score: 677.9 bits (1748), Expect = 2.300e-191 Identity = 338/477 (70.86%), Postives = 386/477 (80.92%), Query Frame = 0 Query: 17 TSMIRSITSETKS---WATALNEPLVKTDPDLYAIIEQEKIRQQESLVLIASENFTSKSVFDALGSVMSNKYSEGYPAARYYGGNENIDKVESLCQKRALDAFGLDPKEWGVNVQTLSGSPANFQAYTAVLAPHDRIMALDLPHGGHLSHGYQTDSKKISAVSIFFETFPYRLDESTGRIDYDKMEENAALFRPKLLVAGASAYARTIDYERMRKIADKHNAYLLSDMAHISGLVAAGVIPSPFPHSDIVTTTTHKSLRGPRGAMIFYRKGVRKVTKKGVEIPYDLEEKINFAVFPGLQGGPHNHTIAALATALKQVATPEFKKYQEQVLKNSARLADTLLKAGYSLVSGGTDNHLVLVDLKPQQVDGARVERVMELANMAANKNTVPGDRSALTPGGIRIGCPALTSRGFTEEDFEQVGHFFDRSVKIAQAIKKETGPKIKDFKEALKDGPGKYGEVTKLKEDVVAFAKKFPTVGF 491 T++ +S KS W LN + + DP++ IIE EK RQ + L LI SENFTS SV A+GSVM+NKYSEGYP ARYYGGNE ID E LCQKRAL AF LDP++WGVNVQ+LSGSPANFQ YTA+L PH+RIMALDLPHGGHLSHGYQTD KKISAVSIFFET PYRLDESTG IDYD ME++A L+RPKL+VAGASAYAR DY RMRK+ DK A LL+DMAHISGLVAAGV+PSPF +D+VTTTTHKSLRGPRGAMIFYRKG+++ KKG +I YD E+KIN AVFPGLQGGPHNHTIA LA ALKQ ATPEFK YQEQVL NSAR A L+ GY LVSGGT+NHLVLV+LKP+ VDG+RVERVMELA++AANKNTVPGD SAL PGGIR+G PALTSRGF EEDFE+V FFDR+V IA +KK TG K+KDF+ A+ P E+ KL+ +V FAK+FPT+GF Sbjct: 39 TAVASEYSSSAKSNVTWPKQLNADISEVDPEITDIIEHEKNRQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEFIDMAERLCQKRALAAFRLDPEKWGVNVQSLSGSPANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDMKKISAVSIFFETMPYRLDESTGYIDYDTMEKSAVLYRPKLIVAGASAYARHYDYARMRKVCDKQKAILLADMAHISGLVAAGVVPSPFDFADVVTTTTHKSLRGPRGAMIFYRKGLKETNKKGEQIFYDYEDKINAAVFPGLQGGPHNHTIAGLAVALKQAATPEFKAYQEQVLSNSARFAKALMSQGYELVSGGTENHLVLVNLKPKGVDGSRVERVMELAHIAANKNTVPGDVSALVPGGIRMGTPALTSRGFIEEDFEKVAEFFDRAVGIAVKVKKSTGAKLKDFRAAVDTDPEIQAEIGKLRTEVEEFAKQFPTIGF 515
BLAST of NO20G01610 vs. NCBI_GenBank
Match: XP_024390705.1 (serine hydroxymethyltransferase 1, mitochondrial-like [Physcomitrella patens] >PNR62848.1 hypothetical protein PHYPA_001272 [Physcomitrella patens]) HSP 1 Score: 677.9 bits (1748), Expect = 2.300e-191 Identity = 329/462 (71.21%), Postives = 383/462 (82.90%), Query Frame = 0 Query: 29 SWATALNEPLVKTDPDLYAIIEQEKIRQQESLVLIASENFTSKSVFDALGSVMSNKYSEGYPAARYYGGNENIDKVESLCQKRALDAFGLDPKEWGVNVQTLSGSPANFQAYTAVLAPHDRIMALDLPHGGHLSHGYQTDSKKISAVSIFFETFPYRLDESTGRIDYDKMEENAALFRPKLLVAGASAYARTIDYERMRKIADKHNAYLLSDMAHISGLVAAGVIPSPFPHSDIVTTTTHKSLRGPRGAMIFYRKGVRKVTKKGVEIPYDLEEKINFAVFPGLQGGPHNHTIAALATALKQVATPEFKKYQEQVLKNSARLADTLLKAGYSLVSGGTDNHLVLVDLKPQQVDGARVERVMELANMAANKNTVPGDRSALTPGGIRIGCPALTSRGFTEEDFEQVGHFFDRSVKIAQAIKKETGPKIKDFKEALKDGPGKYGEVTKLKEDVVAFAKKFPTVGF 491 +W LN + + DP++ IIE EK RQ + L LI SENFTS SV A+GSVM+NKYSEGYP ARYYGGNE ID E LCQKRAL AF LDP++WGVNVQ+LSGSPANFQ YTA+L PH+RIMALDLPHGGHLSHGYQTD+KKISAVSIFFET PYRL+ESTG IDYD+ME++A LFRPKL+VAGASAYAR DY RMR++ DK A LL+DMAHISGLVA GV+PSPF ++D+VTTTTHKSLRGPRGAMIFYRKG+++ TKKG ++ YD E+KIN +VFPGLQGGPHNHTI LA ALKQ ATPEFK YQEQVL+NSA A L+ GY LVSGGT+NHLVLV+LKP+ VDG+RVERVMELA++AANKNTVPGD SAL PGGIR+G PALTSRGFTEEDFE+V +FDR+V+IA +KK TG K+KDF+ + P E+ KLK +V FAK+FPT+GF Sbjct: 53 TWPKQLNADISEVDPEIVDIIEHEKNRQYKGLELIPSENFTSLSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAERLCQKRALAAFRLDPEKWGVNVQSLSGSPANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQMEKSATLFRPKLIVAGASAYARHYDYARMRQVCDKQKAILLADMAHISGLVAGGVVPSPFDYADVVTTTTHKSLRGPRGAMIFYRKGLKETTKKGEQVFYDYEDKINASVFPGLQGGPHNHTITGLAVALKQAATPEFKAYQEQVLRNSAHFAKALMGRGYELVSGGTENHLVLVNLKPKGVDGSRVERVMELAHIAANKNTVPGDVSALVPGGIRMGTPALTSRGFTEEDFEKVAEYFDRAVEIAVKVKKSTGTKLKDFRNVVDTDPEVQAEIGKLKHEVEEFAKQFPTIGF 514
BLAST of NO20G01610 vs. NCBI_GenBank
Match: PRW61055.1 (serine hydroxymethyltransferase [Chlorella sorokiniana]) HSP 1 Score: 673.3 bits (1736), Expect = 5.600e-190 Identity = 331/463 (71.49%), Postives = 383/463 (82.72%), Query Frame = 0 Query: 29 SWATALNEPLVKTDPDLYAIIEQEKIRQQESLVLIASENFTSKSVFDALGSVMSNKYSEGYPAARYYGGNENIDKVESLCQKRALDAFGLDPKEWGVNVQTLSGSPANFQAYTAVLAPHDRIMALDLPHGGHLSHGYQTDSKKISAVSIFFETFPYRLDESTGRIDYDKMEENAALFRPKLLVAGASAYARTIDYERMRKIADKHNAYLLSDMAHISGLVAAGVIPSPFPHSDIVTTTTHKSLRGPRGAMIFYRKGVRKVTKKGVEIPYDLEEKINFAVFPGLQGGPHNHTIAALATALKQVATPEFKKYQEQVLKNSARLADTLLKAGYSLVSGGTDNHLVLVDLKPQQVDGARVERVMELANMAANKNTVPGDRSALTPGGIRIGCPALTSRGFTEEDFEQVGHFFDRSVKIAQAIKKETGPKIKDFKEAL-KDGPGKYGEVTKLKEDVVAFAKKFPTVGF 491 +W LN L + DP+LY IIE EK RQ + L LI SENF S SV +A+GSVM+NKYSEGYP ARYYGGNE ID+ E LCQKRAL+AF LDP++WGVNVQ+LSGSPANFQ YTA+L PHDRIMALDLPHGGHLSHGYQTD+KKISA SIFFET PYRLDESTG IDYD ME+ A LFRPKL+VAGASAY R DY RMR +ADKHNA LL+DMAHISGLVAAG++PSPF ++D+VTTTTHKSLRGPRGAMIFYRKG + V KKG I YDLE INF+VFPGLQGGPHNHTI+ LA AL+Q ATPEFK YQEQVL+NS LA L G+SLVSGGTDNH+VL DL+P+ VDG+RVERV+ELA++AANKNTVPGD SA+ PGG+R+G PALTSRGF E+DF+QV F +R V+IA +KK TGPK+KDF+EAL K+ P ++ L+ DV FAK+FPT+GF Sbjct: 998 TWPKVLNAGLSEVDPELYDIIEHEKNRQYKGLELIPSENFVSASVMEAVGSVMTNKYSEGYPGARYYGGNEFIDQAERLCQKRALEAFRLDPEQWGVNVQSLSGSPANFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISATSIFFETMPYRLDESTGLIDYDMMEKTATLFRPKLIVAGASAYTRHYDYPRMRAVADKHNAVLLADMAHISGLVAAGIVPSPFDYADVVTTTTHKSLRGPRGAMIFYRKGQKGVDKKGNPIKYDLEGPINFSVFPGLQGGPHNHTISGLACALRQAATPEFKAYQEQVLRNSQALAKGLQDRGFSLVSGGTDNHIVLTDLRPKGVDGSRVERVLELAHIAANKNTVPGDVSAMVPGGLRMGSPALTSRGFVEDDFKQVAEFVNRGVEIAAELKKATGPKLKDFREALDKEEP---AALSSLRADVEDFAKQFPTIGF 1457
BLAST of NO20G01610 vs. NCBI_GenBank
Match: XP_005643716.1 (SHMT-domain-containing protein [Coccomyxa subellipsoidea C-169] >EIE19172.1 SHMT-domain-containing protein [Coccomyxa subellipsoidea C-169]) HSP 1 Score: 670.6 bits (1729), Expect = 3.600e-189 Identity = 331/464 (71.34%), Postives = 383/464 (82.54%), Query Frame = 0 Query: 29 SWATALNEPLVKTDPDLYAIIEQEKIRQQESLVLIASENFTSKSVFDALGSVMSNKYSEGYPAARYYGGNENIDKVESLCQKRALDAFGLDPKEWGVNVQTLSGSPANFQAYTAVLAPHDRIMALDLPHGGHLSHGYQTDSKKISAVSIFFETFPYRLDESTGRIDYDKMEENAALFRPKLLVAGASAYARTIDYERMRKIADKHNAYLLSDMAHISGLVAAGVIPSPFPHSDIVTTTTHKSLRGPRGAMIFYRKGVRKVTKKGVEIPYDLEEKINFAVFPGLQGGPHNHTIAALATALKQVATPEFKKYQEQVLKNSARLADTLLKAGYSLVSGGTDNHLVLVDLKPQQVDGARVERVMELANMAANKNTVPGDRSALTPGGIRIGCPALTSRGFTEEDFEQVGHFFDRSVKIAQAIKKE--TGPKIKDFKEALKDGPGKYGEVTKLKEDVVAFAKKFPTVGF 491 +W LN PL + DP+L IIE EK RQ + L LI SENF S SV +A+GSVM+NKYSEGYP ARYYGGNE ID+ E LCQ+RAL AF LDP++WGVNVQ+LSGSPANFQ YTA+L PHDRIM LDLPHGGHLSHGYQTD+K+ISAVSIFFET YRLDE TG IDYD++EENAALFRPKL+VAGASAYAR DY RMR IADKH A+LL+DMAHISGLVAAGV+PSPF ++D+VTTTTHKSLRGPRGAMIF+RKGVR V KKG EI YD+E+KINF+VFPGLQGGPHNHTI+ LA ALKQ A PEFK YQEQVLKNS LAD L K G+ LVSGGT+NHLVL DL+P+ VDG+RVERV+ELA++AANKNTVPGD+SAL PGG+R+G PALTSRGFTE DF++V F DR+V+I +K + GPK+KDFK + + E+ +LK V FAK FPT+GF Sbjct: 34 TWPKLLNAPLSEVDPELEDIIEHEKNRQWKGLELIPSENFVSSSVMEAVGSVMTNKYSEGYPGARYYGGNEFIDQAERLCQERALKAFRLDPEKWGVNVQSLSGSPANFQVYTALLNPHDRIMGLDLPHGGHLSHGYQTDTKRISAVSIFFETMAYRLDEETGIIDYDRLEENAALFRPKLIVAGASAYARHYDYPRMRAIADKHKAFLLADMAHISGLVAAGVVPSPFDYADVVTTTTHKSLRGPRGAMIFFRKGVRSVDKKGKEIMYDMEDKINFSVFPGLQGGPHNHTISGLACALKQAAGPEFKAYQEQVLKNSKALADGLQKRGFKLVSGGTENHLVLADLRPKGVDGSRVERVLELAHIAANKNTVPGDKSALVPGGLRMGAPALTSRGFTEADFDKVAEFVDRAVQITVDLKNKEGAGPKLKDFKAYVDS--NEVPEIKELKSAVEEFAKDFPTIGF 495
BLAST of NO20G01610 vs. NCBI_GenBank
Match: XP_002177340.1 (serine hydroxymethyltransferase [Phaeodactylum tricornutum CCAP 1055/1] >EEC51803.1 serine hydroxymethyltransferase [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 667.9 bits (1722), Expect = 2.400e-188 Identity = 339/483 (70.19%), Postives = 393/483 (81.37%), Query Frame = 0 Query: 10 LSVMPRLTSMIRSITSETKSWATALNEPLVKTDPDLYAIIEQEKIRQQESLVLIASENFTSKSVFDALGSVMSNKYSEGYPAARYYGGNENIDKVESLCQKRALDAFGLDPKEWGVNVQTLSGSPANFQAYTAVLAPHDRIMALDLPHGGHLSHGYQTDSKKISAVSIFFETFPYRLDESTGRIDYDKMEENAALFRPKLLVAGASAYARTIDYERMRKIADKHNAYLLSDMAHISGLVAAGVIPSPFPHSDIVTTTTHKSLRGPRGAMIFYRKGVRKVTKKGVEIPYDLEEKINFAVFPGLQGGPHNHTIAALATALKQVATPEFKKYQEQVLKNSARLADTLLKAGYSLVSGGTDNHLVLVDLKPQ-QVDGARVERVMELANMAANKNTVPGDRSALTPGGIRIGCPALTSRGFTEEDFEQVGHFFDRSVKIAQAIKK-ETGPKIKDFKEALKDGPGKYGEVTKLKEDVVAFAKKFPTVGF 491 LSV L IR I + T + LN+ L++TDP+L +IEQEK RQ+ SLVLIASENFTSK+V DALGSV+SNKYSEGYP ARYYGGNENID+VE LCQKRAL+AF LDP EWGVNVQ+LSGSPANFQ YTA+L H RI+ALDLPHGGHLSHGYQT +KKIS VS +FE+ PYRLDESTG IDYD+ME++A LFRPK++VAGASAY+R IDYER+RKIAD AY++SDMAHISGLVAA VIPS F +SD+VTTTTHKSLRGPRGAMIFYRKG + KKG I YDLEEKINF VFPGLQGGPHNHTI ALAT LKQ AT +F YQ+QVLKNS+RLA+ L K GY+LVSGGTDNHLVL+D+K ++DGARVER++ELA +A NKNTVPGD SAL PGGIR+G PALTSRGF E+DF +V HFFDR+VKIA +K + G K+K F+E GP ++ +L+ DV FA FPTVGF Sbjct: 2 LSVRSTLAPAIRRIATRTFAAGADLNKTLLETDPELSQLIEQEKARQRNSLVLIASENFTSKAVLDALGSVLSNKYSEGYPGARYYGGNENIDQVELLCQKRALEAFHLDPAEWGVNVQSLSGSPANFQVYTALLETHARILALDLPHGGHLSHGYQTATKKISMVSRYFESMPYRLDESTGTIDYDQMEKSADLFRPKMIVAGASAYSRLIDYERIRKIADGVGAYVMSDMAHISGLVAAQVIPSCFEYSDVVTTTTHKSLRGPRGAMIFYRKGQKGTDKKGNPIMYDLEEKINFTVFPGLQGGPHNHTIGALATCLKQAATADFVVYQKQVLKNSSRLAEELNKLGYTLVSGGTDNHLVLIDVKSSAKIDGARVERILELACIATNKNTVPGDTSALMPGGIRMGTPALTSRGFKEDDFTKVAHFFDRAVKIAVKLKNTDQGAKLKGFREMCAVGPSVDADLVQLRHDVSEFACLFPTVGF 484
BLAST of NO20G01610 vs. NCBI_GenBank
Match: PSC74475.1 (serine hydroxymethyltransferase [Micractinium conductrix]) HSP 1 Score: 667.9 bits (1722), Expect = 2.400e-188 Identity = 330/463 (71.27%), Postives = 379/463 (81.86%), Query Frame = 0 Query: 29 SWATALNEPLVKTDPDLYAIIEQEKIRQQESLVLIASENFTSKSVFDALGSVMSNKYSEGYPAARYYGGNENIDKVESLCQKRALDAFGLDPKEWGVNVQTLSGSPANFQAYTAVLAPHDRIMALDLPHGGHLSHGYQTDSKKISAVSIFFETFPYRLDESTGRIDYDKMEENAALFRPKLLVAGASAYARTIDYERMRKIADKHNAYLLSDMAHISGLVAAGVIPSPFPHSDIVTTTTHKSLRGPRGAMIFYRKGVRKVTKKGVEIPYDLEEKINFAVFPGLQGGPHNHTIAALATALKQVATPEFKKYQEQVLKNSARLADTLLKAGYSLVSGGTDNHLVLVDLKPQQVDGARVERVMELANMAANKNTVPGDRSALTPGGIRIGCPALTSRGFTEEDFEQVGHFFDRSVKIAQAIKKETGPKIKDFKEAL-KDGPGKYGEVTKLKEDVVAFAKKFPTVGF 491 +W LN PLV+ DP+L IIE EK RQ + L LI SENF S SV +A+GSVM+NKYSEGYP ARYYGGNE ID+ E LCQ+RAL AF LDP++WGVNVQ+LSGSPANFQ YTA+L PHDRIMALDLPHGGHLSHGYQTD+KKISA SIFFET PYRLDESTG IDYD ME+ A LFRPKL+VAGASAY R DY RMR +ADKHNA LL+DMAHISGLVAAG++PSPF ++D+VTTTTHKSLRGPRGAMIFYRKG + KKG + Y LE INF+VFPGLQGGPHNHTI+ LA AL Q ATPEFK YQEQVLKNS LA L K G+SLVSGGTDNH+VL DL+P+ VDG+RVERV+ELA++AANKNTVPGD SA+ PGG+R+G PALTSRGF E DFEQV F DRSVKIA +KK +G K+KDF+E L K+ P + L+++V FAK+FPT+GF Sbjct: 49 TWPRVLNAPLVEVDPELMDIIEHEKNRQYKGLELIPSENFVSASVMEAVGSVMTNKYSEGYPGARYYGGNEFIDQAERLCQRRALAAFRLDPEQWGVNVQSLSGSPANFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISATSIFFETMPYRLDESTGLIDYDMMEKTATLFRPKLIVAGASAYTRHYDYPRMRVVADKHNAVLLADMAHISGLVAAGIVPSPFDYADVVTTTTHKSLRGPRGAMIFYRKGQKGTDKKGNPVMYHLEGPINFSVFPGLQGGPHNHTISGLACALNQAATPEFKSYQEQVLKNSQALAQGLQKRGFSLVSGGTDNHIVLTDLRPKGVDGSRVERVLELAHIAANKNTVPGDVSAMVPGGLRMGSPALTSRGFVERDFEQVAEFVDRSVKIAADLKKASGLKLKDFRELLEKEEP---AALATLRKEVEDFAKQFPTIGF 508
BLAST of NO20G01610 vs. NCBI_GenBank
Match: XP_009405786.1 (PREDICTED: serine hydroxymethyltransferase, mitochondrial-like [Musa acuminata subsp. malaccensis]) HSP 1 Score: 667.5 bits (1721), Expect = 3.100e-188 Identity = 327/464 (70.47%), Postives = 383/464 (82.54%), Query Frame = 0 Query: 29 SWATALNEPLVKTDPDLYAIIEQEKIRQQESLVLIASENFTSKSVFDALGSVMSNKYSEGYPAARYYGGNENIDKVESLCQKRALDAFGLDPKEWGVNVQTLSGSPANFQAYTAVLAPHDRIMALDLPHGGHLSHGYQTDSKKISAVSIFFETFPYRLDESTGRIDYDKMEENAALFRPKLLVAGASAYARTIDYERMRKIADKHNAYLLSDMAHISGLVAAGVIPSPFPHSDIVTTTTHKSLRGPRGAMIFYRKGVRKVTKKGVEIPYDLEEKINFAVFPGLQGGPHNHTIAALATALKQVATPEFKKYQEQVLKNSARLADTLLKAGYSLVSGGTDNHLVLVDLKPQQVDGARVERVMELANMAANKNTVPGDRSALTPGGIRIGCPALTSRGFTEEDFEQVGHFFDRSVKIAQAIKKET--GPKIKDFKEALKDGPGKYGEVTKLKEDVVAFAKKFPTVGF 491 +W LN PL DP++ IIE EK RQ + L LI SENFTS SV A+GSVM NKYSEGYP ARYYGGNE ID ESLCQKRAL+AFGLDP +WGVNVQ+LSGSP+NFQ YTA+L PH+RIMALDLPHGGHLSHGYQTD+KKISAVSIFFET PYRLDESTG IDYD++E++A LFRPKL+VAGASAYAR DYER+RK+ DK A LL+DMAHISGLVAAGVIPSPF ++DIVTTTTHKSLRGPRGAMIF+RKG++++ KKG E+ YD E+KIN AVFPGLQGGPHNHTI+ LA ALKQ TPEFK YQEQVLKN A+ A+ L++ GY LVSGGTDNHLVLV+LK + +DG+RVE+V+ELA++AANKNTVPGD SA+ PGGIR+G PALTSRGF EEDF +V FFD +VK+A IK ET G K+KDF ++ E++KL +V +AK+FPT+GF Sbjct: 48 TWTKQLNAPLEVVDPEIAEIIELEKARQWKGLELIPSENFTSVSVMQAVGSVMINKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFGLDPSKWGVNVQSLSGSPSNFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCDKQKAILLADMAHISGLVAAGVIPSPFKYADIVTTTTHKSLRGPRGAMIFFRKGLKEINKKGQEVMYDFEDKINAAVFPGLQGGPHNHTISGLAVALKQATTPEFKAYQEQVLKNCAKFAECLVEKGYELVSGGTDNHLVLVNLKNKGIDGSRVEKVLELAHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVADFFDIAVKLALKIKAETKGGSKLKDFVATIQTDANIQYEISKLCHEVEDYAKQFPTIGF 511
BLAST of NO20G01610 vs. NCBI_GenBank
Match: XP_022768510.1 (serine hydroxymethyltransferase 2, mitochondrial-like [Durio zibethinus]) HSP 1 Score: 666.0 bits (1717), Expect = 9.000e-188 Identity = 325/463 (70.19%), Postives = 382/463 (82.51%), Query Frame = 0 Query: 29 SWATALNEPLVKTDPDLYAIIEQEKIRQQESLVLIASENFTSKSVFDALGSVMSNKYSEGYPAARYYGGNENIDKVESLCQKRALDAFGLDPKEWGVNVQTLSGSPANFQAYTAVLAPHDRIMALDLPHGGHLSHGYQTDSKKISAVSIFFETFPYRLDESTGRIDYDKMEENAALFRPKLLVAGASAYARTIDYERMRKIADKHNAYLLSDMAHISGLVAAGVIPSPFPHSDIVTTTTHKSLRGPRGAMIFYRKGVRKVTKKGVEIPYDLEEKINFAVFPGLQGGPHNHTIAALATALKQVATPEFKKYQEQVLKNSARLADTLLKAGYSLVSGGTDNHLVLVDLKPQQVDGARVERVMELANMAANKNTVPGDRSALTPGGIRIGCPALTSRGFTEEDFEQVGHFFDRSVKIAQAIKKET-GPKIKDFKEALKDGPGKYGEVTKLKEDVVAFAKKFPTVGF 491 +W LN PL + DP++ IIE EK RQ + L LI SENFTS SV A+GSVM+NKYSEGYP ARYYGGNE ID ESLCQKRAL+AFGLDP EWGVNVQ+LSGSPANFQ YTA+L PH+RIMALDLPHGGHLSHGYQTD+KKISAVSIFFET PYRLDESTG IDYD++E++A LFRPKL+VAGASAYAR DY +RK+ DK A LL+DMAHISGLVAAGVIPSPF ++D+VTTTTHKSLRGPRGAMIF+RKGV+++ K+G E+ YDLE+KIN AVFPGLQGGPHNHTIA LA ALKQV TPE+K YQEQVL N + A LL+ GY LVSGGT+NHLVLV+L+ + +DG+RVE+V+E ++AANKNTVPGD SA+ PGGIR+G PALTSRGF EEDFE+V FFD +VK+A IK ET G K+KDF L+ E+ KL+++V +AK+FPT+GF Sbjct: 45 NWVHRLNAPLEEIDPEIADIIELEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFGLDPAEWGVNVQSLSGSPANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYDQLEKSAVLFRPKLIVAGASAYARLYDYAHIRKVCDKQKAILLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEVMYDLEDKINQAVFPGLQGGPHNHTIAGLAVALKQVRTPEYKAYQEQVLSNCSIFAQRLLEKGYELVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDLSAMVPGGIRMGTPALTSRGFVEEDFEKVADFFDAAVKLALKIKAETNGTKLKDFVATLQSDANIQSEIAKLRQEVEEYAKQFPTIGF 507 The following BLAST results are available for this feature:
BLAST of NO20G01610 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO20G01610 ID=NO20G01610|Name=NO20G01610|organism=Nannochloropsis oceanica|type=gene|length=3714bpback to top protein sequence of NO20G01610.1 >NO20G01610.1-protein ID=NO20G01610.1-protein|Name=NO20G01610.1|organism=Nannochloropsis oceanica|type=polypeptide|length=491bpback to top Synonyms
Publications
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