NO20G01550, NO20G01550 (gene) Nannochloropsis oceanica

Overview
NameNO20G01550
Unique NameNO20G01550
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1923
Alignment locationchr20:477744..479666 +

Link to JBrowse

Properties
Property NameValue
DescriptionLipase family protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr20genomechr20:477744..479666 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006629lipid metabolic process
GO:0006629lipid metabolic process
Vocabulary: INTERPRO
TermDefinition
IPR029058AB_hydrolase
IPR002921Fungal_lipase-like
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
Homology
BLAST of NO20G01550 vs. NCBI_GenBank
Match: EWM22078.1 (lipase family protein [Nannochloropsis gaditana])

HSP 1 Score: 399.4 bits (1025), Expect = 1.200e-107
Identity = 183/296 (61.82%), Postives = 223/296 (75.34%), Query Frame = 0
Query:   56 QSHQYNETLAYQLVDLCGCTYCCIHGCNMCTAQPSLKVTSIHSRIHDGHGFVAFDESTDTTYLAFTGTDPLALQDWFDDLNFFPEPFPDCEGCWVDRGFYHTYLELRDQVLAILAAYHREYPTPVLHLTGHSLGGALAVFAALELIHTLGLRVSTLYTFGQPRIGNVPFQTFLQASLEASSCAHFRVTHSRDPVPHLPPSIPPTHSYGFRHEPQEVYYPCGTGRG----VDGW-SSRSIN--SSSSGDDDVCAFVVCDPEEGEDPRGSDQNDFPLNFVDHITYLGFPFTLNYLQCE 345
            + + YNET+A   VDLCGC YCCI GC+ C   P+L VT +HSR+ DGHGFV  D   +  Y+ FTGTDPLA+Q++FDDL+F P  FP CEGCWV RGFYHTYL LRDQVL  LA +  ++P+  LH+TGHSLGGA+AVFAALELIH+LGLRV TLYTFGQPR+GN  FQTFL  +L  SSCAHFR+T  RDP+ HLPP+  P+ S GF+HEPQEV+YPCG  RG    + G  S+++ N  +SS  D + C ++VCDP EGEDPRGSD+    LNFVDH+TYLGFPFT NY+ C+
Sbjct:   98 REYGYNETMARHFVDLCGCAYCCIRGCDTCWTYPALNVTEVHSRVLDGHGFVGLDAPQNVVYIVFTGTDPLAVQNYFDDLDFIPVEFPGCEGCWVHRGFYHTYLGLRDQVLDTLAVFSHDHPSAKLHITGHSLGGAMAVFAALELIHSLGLRVQTLYTFGQPRVGNAAFQTFLHEALSLSSCAHFRITQHRDPIVHLPPTFVPSRSMGFQHEPQEVFYPCGVLRGNITKMSGTESNKTFNPWNSSVSDPESCQYIVCDPVEGEDPRGSDRFRVDLNFVDHVTYLGFPFTANYMLCD 393          
BLAST of NO20G01550 vs. NCBI_GenBank
Match: EWM26431.1 (lipase [Nannochloropsis gaditana])

HSP 1 Score: 176.8 bits (447), Expect = 1.200e-40
Identity = 104/306 (33.99%), Postives = 156/306 (50.98%), Query Frame = 0
Query:   38 IITSRSPLEPPAPTPAGPQSHQYNETLAYQLVDLCGCTYCC------IHGCNMCTAQPSLKVTSIHSRIHDGHGFVAFDESTDTTYLAFTGTDPLALQDWFDDLNFFPEPFP--DCEGCWVDRGFYHTYLELRDQVLAILAAYHREYPTPVLHLTGHSLGGALAVFAALELIHTLGLRVSTLYTFGQPRIGNVPFQTFLQASLEASSCAHFRVTHSRDPVPHLPPSIPPTHSYGFRHEPQEVYYPCGTGRGVDGWSSRSINSSSSGDDDVCAFVVCDPEEGEDPRGSDQNDFPLNFVDHITYLGFP 336
            +  + +P   PAP+P+      YN T    ++D    +Y C         C+ C+  P  +V  I +   DG GFV ++       +AF GT    + +W  +L+F  E FP   CEGC V  GFY  YLELR QV   +  + +++P   + +TGHSLG A+AV   ++L+ +L   V  +  FGQPR+GN  F TF+ +  E+     +R+ H RDPVPHLPP      ++GF H+P EV+Y                      ++D  +++VC+ + GED + SDQ    L+  DH+ YLG P
Sbjct:  302 VSATSAPTFTPAPSPSDQNRRLYNITAVRTILDYAEASYSCKTSACEAWNCSTCSRHPDTEVRRISA--PDGDGFVGYNSVEGALVVAFAGTSMDDIVEWMANLDFKKEDFPHDGCEGCQVHTGFYTAYLELRSQVREFVQYFLQQHPDAPIWVTGHSLGAAIAVHCMVDLM-SLSYNVRRVVNFGQPRVGNKQFATFVASLAESLDFPLYRLVHHRDPVPHLPP-----RAFGFHHQPFEVFY----------------------NEDQTSYIVCN-DSGEDLQCSDQFLVDLDVADHLNYLGVP 576          
BLAST of NO20G01550 vs. NCBI_GenBank
Match: EWM30033.1 (lipase family protein [Nannochloropsis gaditana])

HSP 1 Score: 166.0 bits (419), Expect = 2.200e-37
Identity = 96/285 (33.68%), Postives = 141/285 (49.47%), Query Frame = 0
Query:   60 YNETLAYQLVDLCGCTYCC------IHGCNMCTAQPSLKVTSIHSRIHDGHGFVAFDESTDTTYLAFTGTDPLALQDWFDDLNFFPEPFP--DCEGCWVDRGFYHTYLELRDQVLAILAAYHREYPTPVLHLTGHSLGGALAVFAALELIHTLGLRVSTLYTFGQPRIGNVPFQTFLQASLEASSCAHFRVTHSRDPVPHLPPSIPPTHSYGFRHEPQEVYYPCGTGRGVDGWSSRSINSSSSGDDDVCAFVVCDPEEGEDPRGSDQNDFPLNFVDHITYLGFPF 337
            YNET    ++D     Y C         C+ C+  P  +V  ++  +H+G+GFV +D       ++F GTD  ++ +W DDL+    P+P   C+ C V  GF  TY  LR Q+  ++ A  R++P   + +TGHSLG ALAV   ++L+ +L   V  +  FGQPR+GN  F +F+ A   + S   +R+ H RDPVPHLPP+     S+GF H P EV+Y                        +   + +CD   GED   SD      +  DH+ YLG  F
Sbjct:   67 YNETAVRVMLDYAAAAYYCRTSACEAWACSACSRHPRTEVRRVYDNVHNGNGFVGWDPVEGVVVVSFAGTDTTSVANWIDDLDEVKTPWPLEGCQECKVHAGFLTTYSALRPQLQPLVEALVRDHPQAPVWVTGHSLGAALAVLCMVDLL-SLSYPVRAVVNFGQPRVGNQHFSSFVAAQSASLSLCFYRLVHHRDPVPHLPPA-----SFGFHHSPFEVFY----------------------TKNETYYHICD-ATGEDKHCSDHYLIDPSIKDHLNYLGVLF 322          
BLAST of NO20G01550 vs. NCBI_GenBank
Match: XP_001447344.1 (hypothetical protein [Paramecium tetraurelia strain d4-2] >CAK79947.1 unnamed protein product [Paramecium tetraurelia])

HSP 1 Score: 153.7 bits (387), Expect = 1.100e-33
Identity = 98/300 (32.67%), Postives = 141/300 (47.00%), Query Frame = 0
Query:   60 YNETLAYQLVDLCGCTYC---------CIHGCNMCTAQPSLKVTSIHSRIHDGHGFVAFDESTDTTYLAFTGTDPLALQDWFDDLNFFPEPFPDC-EGCWVDRGFYHTYLELRDQVLAILAAYHREYPTPVLHLTGHSLGGALAVFAALELIHTLGLRVSTLYTFGQPRIGNVPFQTFLQASLEASSCAHFRVTHSRDPVPHLPPSIPPTHSYGFRHEPQEVYYPCGTGRGVDGWSSRSINSSSSGDDDVCAFV-----VCDPEEGEDPRGSDQNDFPLNFVDHITYLGFPFTLNYLQCE 345
            ++E  A  L  L   +YC         C   C     +P   +T   +  ++  G+ A+   TD  YL F GT P ++ +W +D++F    +P C   C V RGFY+++L ++DQVL  L +  ++YP   + +TGHSLGGALA   AL  + T G  +S  YTFG PR+G+  F T++   L       +RVTH+ DPVPHLP  I      GF H  QE YY                        D    +     +C+    ED   S+ N   L+  DH  Y+G+  TL  L C+
Sbjct:   23 FDEPFAKHLFYLTSASYCSEQHIRNWNCGKPCK--ELKPITDITMFINATNENAGYGAYHPETDEIYLVFRGTLPWSITNWIEDIDFIKTDYPYCPNNCQVHRGFYYSFLGIQDQVLTTLKSLTKKYPLAKITITGHSLGGALA-HHALVYLATRGFTISKFYTFGSPRVGDKNFFTYVNQQLFPG--PKYRVTHNHDPVPHLPALI-----QGFHHVNQEAYY-----------------------KDFLLVIHKKVQLCNDSLKEDDSCSNANLVDLSVSDHANYMGYDMTLELLTCQ 289          
BLAST of NO20G01550 vs. NCBI_GenBank
Match: XP_001437079.1 (hypothetical protein [Paramecium tetraurelia strain d4-2] >CAK69682.1 unnamed protein product [Paramecium tetraurelia])

HSP 1 Score: 152.9 bits (385), Expect = 1.900e-33
Identity = 98/300 (32.67%), Postives = 141/300 (47.00%), Query Frame = 0
Query:   60 YNETLAYQLVDLCGCTYC---------CIHGCNMCTAQPSLKVTSIHSRIHDGHGFVAFDESTDTTYLAFTGTDPLALQDWFDDLNFFPEPFPDC-EGCWVDRGFYHTYLELRDQVLAILAAYHREYPTPVLHLTGHSLGGALAVFAALELIHTLGLRVSTLYTFGQPRIGNVPFQTFLQASLEASSCAHFRVTHSRDPVPHLPPSIPPTHSYGFRHEPQEVYYPCGTGRGVDGWSSRSINSSSSGDDDVCAFV-----VCDPEEGEDPRGSDQNDFPLNFVDHITYLGFPFTLNYLQCE 345
            Y+E+ A  L  L   +YC         C   C     +P   +T   +  ++  G+ A+   TD  YL F GT P +L +W +D++F    +P C   C V RGFY+++L ++DQVL  L +  ++YP   + +TGHSLGGALA   AL  + T G  +S  YTFG PR+G+  F T++   L       FR+TH+ DPVPHLP  I      GF H  QE YY                        D    +     +C+    ED   S+ N   L+  DH  Y+G+   +  L C+
Sbjct:   23 YDESFAKHLFYLTSASYCSEQHIKSWNCGKPCK--ELKPITDITFFINATNENAGYGAYHPETDEIYLVFRGTLPWSLTNWIEDIDFIKTDYPYCPNNCEVHRGFYYSFLGIQDQVLNCLKSLSKKYPLAKITITGHSLGGALANH-ALVYLTTRGFTISKFYTFGSPRVGDKNFFTYVNQQLFPG--PKFRITHNHDPVPHLPALI-----QGFHHVNQEAYY-----------------------KDYLLVIHKKVQMCNDNLKEDDSCSNSNIADLSVSDHTNYMGYDMAVELLTCQ 289          
BLAST of NO20G01550 vs. NCBI_GenBank
Match: XP_001423760.1 (hypothetical protein [Paramecium tetraurelia strain d4-2] >CAK56362.1 unnamed protein product [Paramecium tetraurelia])

HSP 1 Score: 147.9 bits (372), Expect = 6.200e-32
Identity = 92/287 (32.06%), Postives = 136/287 (47.39%), Query Frame = 0
Query:   72 CGCTYC---------CIHGCNMCTAQPSLKVTSIHSRIHDGHGFVAFDESTDTTYLAFTGTDPLALQDWFDDLNFFPEPFPDC-EGCWVDRGFYHTYLELRDQVLAILAAYHREYPTPVLHLTGHSLGGALAVFAALELIHTLGLRVSTLYTFGQPRIGNVPFQTFLQASLEASSCAHFRVTHSRDPVPHLPPSIPPTHSYGFRHEPQEVYYPCGTGRGVDGWSSRSINSSSSGDDDVCAF----VVCDPEEGEDPRGSDQNDFPLNFVDHITYLGFPFTLNYLQCE 345
            C  +YC         C   C+       +++    +  ++  G+  +D   +   + F GT P ++++WF+D+N+    FP C   C V RGFY++YL ++DQVL        +YP   L +TGHSLGGAL+  A + L    G RV   Y+FG PR+G+  F  ++++   +   A FRVTH  DPVPHLP  +      GF H   E YY                        D   F     +C+ E+ EDPR S+QN   L+  DH  YLG+   +  L C+
Sbjct:   44 CAASYCNPNVILNWSCTTPCSKTPYMDDVQI--FVNATNENAGYSGYDPKHNEIIIVFRGTLPWSIKNWFEDINYIKTSFPYCTNNCQVHRGFYYSYLGIQDQVLNAAKRLTSKYPNAKLVITGHSLGGALSTHALVALT-VNGYRVDHYYSFGSPRVGDSAFFNYVKSIYPS---AKFRVTHDHDPVPHLPMEV-----QGFHHINTEAYY-----------------------KDFLIFHKDVKICNDEKKEDPRCSNQNLLDLSVDDHCNYLGYNLAIGVLVCQ 296          
BLAST of NO20G01550 vs. NCBI_GenBank
Match: XP_015652886.1 (putative lipase [Leptomonas pyrrhocoris] >KPA74447.1 putative lipase [Leptomonas pyrrhocoris])

HSP 1 Score: 142.9 bits (359), Expect = 2.000e-30
Identity = 110/345 (31.88%), Postives = 153/345 (44.35%), Query Frame = 0
Query:   48 PAPTPAGPQSHQYNETLAYQLVDLCGCTYC---------CIHGCNMCTAQPSLKVTSIHSRIHDGH-GFVAFDESTDTTYLAFTGTDPLALQDWFDDLNFF--PEPFPDC-EGCWVDRGFYHTYLELRDQVLAILAAYHREYPTPVLHLTGHSLGGALAVFAALE------------LIHTLGLRVST-----------------LYTFGQPRIGNVPFQTFLQASLEASSCAHFRVTHSRDPVPHLPPSIPPTHSYGFRHEPQEVYYPCGTGRGVDGWSSRSINSSSSGDDDVCAFVVCDPEEGEDPRGSDQNDFPLNFVDHITYLGFPFTLNYLQCEFSSVDE 351
            PA   A P +  YN + +++ +  C   YC         C   C   T      V +++     G+ GF   D       +AF GT   A  +W  DL+F+  P P P C E C + RGFY  Y  +R+Q+L  + A H +YPT  L +TGHSLGGA+AV +A+E            L   L +  +                  LYTFG+PR+GNV F  +  + L  S    FRVTH+RDPVPHLPP      S+G+ H PQE +YP                      DD       D  + EDP  S+ + +     DH+ YLG   T     C  ++++E
Sbjct:   49 PAFPDASPTAVVYNISNSWRALHFCKSAYCPVDAVVNWSCGSACGNATT--DFHVFNVYENASTGNSGFSGMDHEAGKIVVAFRGTANTA--NWIQDLDFWSMPYPHPACGELCAIHRGFYKAYDSMREQLLQDVLAMHAQYPTYSLFITGHSLGGAIAVLSAIEFTTWNLPRTHSPLADNLSVSAAVPTGVTAADDPAHLMPVELYTFGEPRVGNVYFTNWSTSVL--SQERQFRVTHARDPVPHLPP-----RSWGYLHVPQEHWYPA---------------------DDSVYMRCADRSDAEDPACSN-SVYSTTVSDHLLYLG---TCTRCSCNAATMEE 357          
BLAST of NO20G01550 vs. NCBI_GenBank
Match: KRX00062.1 (hypothetical protein PPERSA_07259 [Pseudocohnilembus persalinus])

HSP 1 Score: 142.9 bits (359), Expect = 2.000e-30
Identity = 86/252 (34.13%), Postives = 121/252 (48.02%), Query Frame = 0
Query:   92 KVTSIHSRIHDGHGFVAFDESTDTTYLAFTGTDPLALQDWFDDLNFFPEPFPDCEGCWVDRGFYHTYLELRDQVLAILAAYHREYPTPVLHLTGHSLGGALAVFAALELIHTLGLRVSTLYTFGQPRIGNVPFQTFLQASLEASSCAHFRVTHSRDPVPHLPPSIPPTHSYGFRHEPQEVYYPCGTGRGVDGWSSRSINSSSSGDDDVCAFVVCDPEEGEDPRGSDQNDFPLNFVDHITYLGFPFTLNYLQC 344
            ++T I S      GF+ + E  D   +++ GT  L ++ W +DLN+F   +P C+GC V RGF+  +  L++            +P   ++LTGHSLG AL+VF A++LI   G      Y FGQPRIGN   Q  +    E  S    RVTH RDPVPHLPP       +GF H  QE++Y                     G     +  +C    GEDP  S++  F  + VDH+ Y G+ +  N   C
Sbjct:   91 EITVIQSANKVNKGFIGYYEPLDAIVISWKGT--LKIRQWMEDLNYFKTDYPYCDGCKVHRGFWMGWQGLQNYFWVAFKKLREAHPESRIYLTGHSLGAALSVFNAMDLIQH-GYTDFVWYNFGQPRIGN---QAVIDYISENLSNQLMRVTHGRDPVPHLPPK-----DFGFSHPSQEIFY-------------------DKGSSPEKSHTLCSKTNGEDPECSNKYVFTTSVVDHVFYEGWDYVYNIGLC 312          
BLAST of NO20G01550 vs. NCBI_GenBank
Match: KRX00063.1 (hypothetical protein PPERSA_07260 [Pseudocohnilembus persalinus])

HSP 1 Score: 138.3 bits (347), Expect = 4.900e-29
Identity = 81/252 (32.14%), Postives = 121/252 (48.02%), Query Frame = 0
Query:   92 KVTSIHSRIHDGHGFVAFDESTDTTYLAFTGTDPLALQDWFDDLNFFPEPFPDCEGCWVDRGFYHTYLELRDQVLAILAAYHREYPTPVLHLTGHSLGGALAVFAALELIHTLGLRVSTLYTFGQPRIGNVPFQTFLQASLEASSCAHFRVTHSRDPVPHLPPSIPPTHSYGFRHEPQEVYYPCGTGRGVDGWSSRSINSSSSGDDDVCAFVVCDPEEGEDPRGSDQNDFPLNFVDHITYLGFPFTLNYLQC 344
            ++T I S      GF  + E  D   +++ GT  + ++ W +D ++F   +P C+GC V +GF+  +  L+             +P   ++LTGHSLG AL+VF A++LI   G+     Y FGQPRIGN     ++Q +L   +    RVTH +DPVPH+PP      S+GF H  QE++Y                       D   +  +C    GEDP  SD+     N VDH+ Y G+ +  N   C
Sbjct:   91 EITVIQSANKVNKGFTGYYEPLDAIIISWKGT--IKIRQWLEDFDYFKTAYPYCDGCEVHKGFWQGWEGLQSYFWLAFNKLREAHPESKIYLTGHSLGAALSVFNAMDLIEN-GITDFVWYNFGQPRIGNQAVVDYIQNNL---TNRLMRVTHHKDPVPHVPPK-----SFGFFHPAQEIFY-------------------DKSSDPSKSHTLCSTTNGEDPTCSDKYKLDTNVVDHVFYEGWDYVYNIGLC 312          
BLAST of NO20G01550 vs. NCBI_GenBank
Match: XP_008901906.1 (hypothetical protein PPTG_08907 [Phytophthora parasitica INRA-310] >ETK92078.1 hypothetical protein L915_04490 [Phytophthora parasitica] >ETL98645.1 hypothetical protein L917_04330 [Phytophthora parasitica] >ETN12893.1 hypothetical protein PPTG_08907 [Phytophthora parasitica INRA-310] >ETP49886.1 hypothetical protein F442_04664 [Phytophthora parasitica P10297])

HSP 1 Score: 136.7 bits (343), Expect = 1.400e-28
Identity = 99/295 (33.56%), Postives = 141/295 (47.80%), Query Frame = 0
Query:   59 QYNETLAYQLVDLCGCTYC----CIH-GCNMCTAQPSLKVTSIHSRIHDG-HGFVAFDESTDTTYLAFTGTDPLALQDWFDDLNFFP-EPFPDCEGCWVDRGFYHTYLELRDQVLAILAAYHREYPTPVLHLTGHSLGGALAVFAALELIHTLGLRVSTLYTFGQPRIGNVPFQTFLQ-ASLEASSCAHFRVTHSRDPVPHLPPSIPPTHSYGFRHEPQEVYYPCGTGRGVDGWSSRSINSSSSGDDDVCAFVVCDPEEGEDPRGSD-QNDFP-LNFVDHITYLGFPFTLNYLQC 344
            +YNET A  L  +   +YC     IH  C  C   PSL+   +     D   G V + +  D   +AF G+  + + +W D+L F     +    G  V +GFY  Y  +  QVL  L    +E+P   L +TGHSLGGA+A   A EL +   + V  LYTFG PR+GN  F   L+ AS+E      +RVTH +D VPHLPP+       GF H  +E++Y                      D+   ++  C   +GEDP  S+  + F   + VDH+TYL    T+++L C
Sbjct:   54 KYNETTALYLAHVTSISYCQEQHIIHWNCQPCAFVPSLEGVKVVEDAKDNFQGLVGYSQLYDALVVAFRGS--MDVTNWLDNLTFLKRRAYAQYPGVKVHQGFYWAYRSVATQVLDTLHKLRKEHPHASLMVTGHSLGGAVAAICAFELEYIEKIPVDALYTFGNPRVGNTNFSGRLRNASMEV-----YRVTHFQDAVPHLPPTWT-----GFEHTSEEIFY----------------------DEFSSSYRTCSQTDGEDPTCSNICSPFSCTSIVDHLTYLN--ITMSHLIC 312          
The following BLAST results are available for this feature:
BLAST of NO20G01550 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM22078.11.200e-10761.82lipase family protein [Nannochloropsis gaditana][more]
EWM26431.11.200e-4033.99lipase [Nannochloropsis gaditana][more]
EWM30033.12.200e-3733.68lipase family protein [Nannochloropsis gaditana][more]
XP_001447344.11.100e-3332.67hypothetical protein [Paramecium tetraurelia strai... [more]
XP_001437079.11.900e-3332.67hypothetical protein [Paramecium tetraurelia strai... [more]
XP_001423760.16.200e-3232.06hypothetical protein [Paramecium tetraurelia strai... [more]
XP_015652886.12.000e-3031.88putative lipase [Leptomonas pyrrhocoris] >KPA74447... [more]
KRX00062.12.000e-3034.13hypothetical protein PPERSA_07259 [Pseudocohnilemb... [more]
KRX00063.14.900e-2932.14hypothetical protein PPERSA_07260 [Pseudocohnilemb... [more]
XP_008901906.11.400e-2833.56hypothetical protein PPTG_08907 [Phytophthora para... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL023nonsL023Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL021nonsL021Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR020ncniR020Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR067ngnoR067Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK002687NSK002687Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO20G01550.1NO20G01550.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
Naga_100039g12gene8354Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO20G01550.1NO20G01550.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO20G01550 ID=NO20G01550|Name=NO20G01550|organism=Nannochloropsis oceanica|type=gene|length=1923bp
ACCCCGGCGTGCTTAAAGAGCCCTTGCTTTATGCCAAGGAAGCAAGAGTG
AGCAAACCAAACGCCATCATCCCAAGCCTGCCTTCGGCTACCCAGCCTTT
TTCCAATAATGACTGTCCCGCCAAGGCAACCCGTCGCGGCAATTGAGGAC
CCTTAGACCTTGTCAGCGGCAAATATCAGCCCAGCGACCTCAACTCCTCC
AGCTCCGAGACTAAGACCACATCCGAGACGAACACCTGCCTCCTCGCGGT
GAAGCTTGAACAGTAGCAGCAGTAGTAGCAGTGGAAGCGGCAGCATTCCA
GCCAATGCCTTCACATCTGTGCCGCCTGGCAACATTCTCCTCTTTTCCAA
CCTCATCTATAACGCTGTCGAAGCGCATAAAATTTACGCTAGCCACTCTC
CACGTACCAGCCACAGATCTACATGCAGCCGCGCAATGCAGCACTATTTC
AAGTTTTGCTTCATTGGACCCATCGGATGATCGTAGCTCTTACCCTATGG
GCACAAAGAAATGCGGCCATTGGGCAATATAGGATCATCACTAGTAGAAG
CCCATTAGAGCCGCCAGCGCCGACGCCTGCTGGGCCTCAAAGCCACCAGT
ACAACGAAACCTTAGCGTACCAACTTGTTGATCTGTGCGgtaggtcatcc
tttcttacctccgttatcatctccaagtgtcctcttacgcgaatttcggc
gtggaggtatatcacatttcttatgttccacctcgtgctccccctacctc
attcctccgtgtacagGCTGCACCTACTGCTGCATTCACGGCTGCAACAT
GTGCACTGCCCAACCATCACTCAAAGTGACGTCGATTCATTCCCGAATCC
ACGACGGGCACGGTTTCGTTGCCTTCGACGAATCTACCGACACTACATAC
CTGGCCTTTACGGGAACTGACCCTTTGGCCTTGCAGGATTGGTTTGACGA
CCTGAATTTCTTCCCTGAACCCTTTCCAGATTGTGAAGGCTGTTGGGTGG
ACCGCGGATTTTACCACACCTACCTGGAGTTACGCGATCAAGTGCTTGCC
ATTCTTGCTGCGTACCATCGGGAGTATCCTACCCCGGTCCTGCACCTGAC
GGGCCATTCCCTAGGAGGAGCCTTGGCAGTATTTGCGGCTTTGGAATTGA
TCCACACATTGGGACTGCGGGTCAGTACGCTCTACACTTTTGGACAGCCC
CGTATTGGCAATGTTCCTTTTCAGACATTTCTTCAAGCTAGTCTAGAGGC
ATCGTCTTGTGCGCATTTTCGGGTGACACACAGTCGGGACCCTGTTCCTC
ATTTGCCTCCATCGATCCCTCCGACGCATTCATATGGCTTCCGACATGAG
CCACAGGAAGTGTATTACCCGTGTGGGACTGGCCGAGGGGTCGACGGATG
GAGCAGCCGCAGCATCAATAGTAGCAGCAGCGGCGATGACGATGTCTGTG
CATTTGTCGTCTGTGATCCTGAGGAAGGGGAAGACCCCCGCGGGAGCGAT
CAAAACGATTTTCCACTGAATTTTGTGGATCATATTACGTATTTAGGATT
TCCGTTTACACTGAACTATTTGCAGTGCGAATTCTCTTCCGTGGATGAAT
CAAGAAGAAAGGAGCCCGAGCCGTTTCTGAGAAGACACAAGGCGGTGGGA
AGCGTGTAAAAGGTAGATTCGGTTGATAGAGGACGAAAGCTTGTGTTCGT
GTGAAGATGGGGAATGGACCGAATATCCAGAGAATGCTGAGAAAAGCACG
AATGAGAATTCGAAATGGAAAACATGTATCTGATCGCAACATGAGGCTTC
AGTGTATCGTATATGCAATTACAGGATGAAAGACATCTACATCTTCTCTC
AGAGTAAGGCCTGCAGACAATAGAGCATTAAATAGAAGGCGAGACGACTC
ACTCAAAAACGCTGCTGTTGGCT
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protein sequence of NO20G01550.1

>NO20G01550.1-protein ID=NO20G01550.1-protein|Name=NO20G01550.1|organism=Nannochloropsis oceanica|type=polypeptide|length=370bp
MQPRNAALFQVLLHWTHRMIVALTLWAQRNAAIGQYRIITSRSPLEPPAP
TPAGPQSHQYNETLAYQLVDLCGCTYCCIHGCNMCTAQPSLKVTSIHSRI
HDGHGFVAFDESTDTTYLAFTGTDPLALQDWFDDLNFFPEPFPDCEGCWV
DRGFYHTYLELRDQVLAILAAYHREYPTPVLHLTGHSLGGALAVFAALEL
IHTLGLRVSTLYTFGQPRIGNVPFQTFLQASLEASSCAHFRVTHSRDPVP
HLPPSIPPTHSYGFRHEPQEVYYPCGTGRGVDGWSSRSINSSSSGDDDVC
AFVVCDPEEGEDPRGSDQNDFPLNFVDHITYLGFPFTLNYLQCEFSSVDE
SRRKEPEPFLRRHKAVGSV*
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Synonyms
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