NO20G01550, NO20G01550 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO20G01550 vs. NCBI_GenBank
Match: EWM22078.1 (lipase family protein [Nannochloropsis gaditana]) HSP 1 Score: 399.4 bits (1025), Expect = 1.200e-107 Identity = 183/296 (61.82%), Postives = 223/296 (75.34%), Query Frame = 0 Query: 56 QSHQYNETLAYQLVDLCGCTYCCIHGCNMCTAQPSLKVTSIHSRIHDGHGFVAFDESTDTTYLAFTGTDPLALQDWFDDLNFFPEPFPDCEGCWVDRGFYHTYLELRDQVLAILAAYHREYPTPVLHLTGHSLGGALAVFAALELIHTLGLRVSTLYTFGQPRIGNVPFQTFLQASLEASSCAHFRVTHSRDPVPHLPPSIPPTHSYGFRHEPQEVYYPCGTGRG----VDGW-SSRSIN--SSSSGDDDVCAFVVCDPEEGEDPRGSDQNDFPLNFVDHITYLGFPFTLNYLQCE 345 + + YNET+A VDLCGC YCCI GC+ C P+L VT +HSR+ DGHGFV D + Y+ FTGTDPLA+Q++FDDL+F P FP CEGCWV RGFYHTYL LRDQVL LA + ++P+ LH+TGHSLGGA+AVFAALELIH+LGLRV TLYTFGQPR+GN FQTFL +L SSCAHFR+T RDP+ HLPP+ P+ S GF+HEPQEV+YPCG RG + G S+++ N +SS D + C ++VCDP EGEDPRGSD+ LNFVDH+TYLGFPFT NY+ C+ Sbjct: 98 REYGYNETMARHFVDLCGCAYCCIRGCDTCWTYPALNVTEVHSRVLDGHGFVGLDAPQNVVYIVFTGTDPLAVQNYFDDLDFIPVEFPGCEGCWVHRGFYHTYLGLRDQVLDTLAVFSHDHPSAKLHITGHSLGGAMAVFAALELIHSLGLRVQTLYTFGQPRVGNAAFQTFLHEALSLSSCAHFRITQHRDPIVHLPPTFVPSRSMGFQHEPQEVFYPCGVLRGNITKMSGTESNKTFNPWNSSVSDPESCQYIVCDPVEGEDPRGSDRFRVDLNFVDHVTYLGFPFTANYMLCD 393
BLAST of NO20G01550 vs. NCBI_GenBank
Match: EWM26431.1 (lipase [Nannochloropsis gaditana]) HSP 1 Score: 176.8 bits (447), Expect = 1.200e-40 Identity = 104/306 (33.99%), Postives = 156/306 (50.98%), Query Frame = 0 Query: 38 IITSRSPLEPPAPTPAGPQSHQYNETLAYQLVDLCGCTYCC------IHGCNMCTAQPSLKVTSIHSRIHDGHGFVAFDESTDTTYLAFTGTDPLALQDWFDDLNFFPEPFP--DCEGCWVDRGFYHTYLELRDQVLAILAAYHREYPTPVLHLTGHSLGGALAVFAALELIHTLGLRVSTLYTFGQPRIGNVPFQTFLQASLEASSCAHFRVTHSRDPVPHLPPSIPPTHSYGFRHEPQEVYYPCGTGRGVDGWSSRSINSSSSGDDDVCAFVVCDPEEGEDPRGSDQNDFPLNFVDHITYLGFP 336 + + +P PAP+P+ YN T ++D +Y C C+ C+ P +V I + DG GFV ++ +AF GT + +W +L+F E FP CEGC V GFY YLELR QV + + +++P + +TGHSLG A+AV ++L+ +L V + FGQPR+GN F TF+ + E+ +R+ H RDPVPHLPP ++GF H+P EV+Y ++D +++VC+ + GED + SDQ L+ DH+ YLG P Sbjct: 302 VSATSAPTFTPAPSPSDQNRRLYNITAVRTILDYAEASYSCKTSACEAWNCSTCSRHPDTEVRRISA--PDGDGFVGYNSVEGALVVAFAGTSMDDIVEWMANLDFKKEDFPHDGCEGCQVHTGFYTAYLELRSQVREFVQYFLQQHPDAPIWVTGHSLGAAIAVHCMVDLM-SLSYNVRRVVNFGQPRVGNKQFATFVASLAESLDFPLYRLVHHRDPVPHLPP-----RAFGFHHQPFEVFY----------------------NEDQTSYIVCN-DSGEDLQCSDQFLVDLDVADHLNYLGVP 576
BLAST of NO20G01550 vs. NCBI_GenBank
Match: EWM30033.1 (lipase family protein [Nannochloropsis gaditana]) HSP 1 Score: 166.0 bits (419), Expect = 2.200e-37 Identity = 96/285 (33.68%), Postives = 141/285 (49.47%), Query Frame = 0 Query: 60 YNETLAYQLVDLCGCTYCC------IHGCNMCTAQPSLKVTSIHSRIHDGHGFVAFDESTDTTYLAFTGTDPLALQDWFDDLNFFPEPFP--DCEGCWVDRGFYHTYLELRDQVLAILAAYHREYPTPVLHLTGHSLGGALAVFAALELIHTLGLRVSTLYTFGQPRIGNVPFQTFLQASLEASSCAHFRVTHSRDPVPHLPPSIPPTHSYGFRHEPQEVYYPCGTGRGVDGWSSRSINSSSSGDDDVCAFVVCDPEEGEDPRGSDQNDFPLNFVDHITYLGFPF 337 YNET ++D Y C C+ C+ P +V ++ +H+G+GFV +D ++F GTD ++ +W DDL+ P+P C+ C V GF TY LR Q+ ++ A R++P + +TGHSLG ALAV ++L+ +L V + FGQPR+GN F +F+ A + S +R+ H RDPVPHLPP+ S+GF H P EV+Y + + +CD GED SD + DH+ YLG F Sbjct: 67 YNETAVRVMLDYAAAAYYCRTSACEAWACSACSRHPRTEVRRVYDNVHNGNGFVGWDPVEGVVVVSFAGTDTTSVANWIDDLDEVKTPWPLEGCQECKVHAGFLTTYSALRPQLQPLVEALVRDHPQAPVWVTGHSLGAALAVLCMVDLL-SLSYPVRAVVNFGQPRVGNQHFSSFVAAQSASLSLCFYRLVHHRDPVPHLPPA-----SFGFHHSPFEVFY----------------------TKNETYYHICD-ATGEDKHCSDHYLIDPSIKDHLNYLGVLF 322
BLAST of NO20G01550 vs. NCBI_GenBank
Match: XP_001447344.1 (hypothetical protein [Paramecium tetraurelia strain d4-2] >CAK79947.1 unnamed protein product [Paramecium tetraurelia]) HSP 1 Score: 153.7 bits (387), Expect = 1.100e-33 Identity = 98/300 (32.67%), Postives = 141/300 (47.00%), Query Frame = 0 Query: 60 YNETLAYQLVDLCGCTYC---------CIHGCNMCTAQPSLKVTSIHSRIHDGHGFVAFDESTDTTYLAFTGTDPLALQDWFDDLNFFPEPFPDC-EGCWVDRGFYHTYLELRDQVLAILAAYHREYPTPVLHLTGHSLGGALAVFAALELIHTLGLRVSTLYTFGQPRIGNVPFQTFLQASLEASSCAHFRVTHSRDPVPHLPPSIPPTHSYGFRHEPQEVYYPCGTGRGVDGWSSRSINSSSSGDDDVCAFV-----VCDPEEGEDPRGSDQNDFPLNFVDHITYLGFPFTLNYLQCE 345 ++E A L L +YC C C +P +T + ++ G+ A+ TD YL F GT P ++ +W +D++F +P C C V RGFY+++L ++DQVL L + ++YP + +TGHSLGGALA AL + T G +S YTFG PR+G+ F T++ L +RVTH+ DPVPHLP I GF H QE YY D + +C+ ED S+ N L+ DH Y+G+ TL L C+ Sbjct: 23 FDEPFAKHLFYLTSASYCSEQHIRNWNCGKPCK--ELKPITDITMFINATNENAGYGAYHPETDEIYLVFRGTLPWSITNWIEDIDFIKTDYPYCPNNCQVHRGFYYSFLGIQDQVLTTLKSLTKKYPLAKITITGHSLGGALA-HHALVYLATRGFTISKFYTFGSPRVGDKNFFTYVNQQLFPG--PKYRVTHNHDPVPHLPALI-----QGFHHVNQEAYY-----------------------KDFLLVIHKKVQLCNDSLKEDDSCSNANLVDLSVSDHANYMGYDMTLELLTCQ 289
BLAST of NO20G01550 vs. NCBI_GenBank
Match: XP_001437079.1 (hypothetical protein [Paramecium tetraurelia strain d4-2] >CAK69682.1 unnamed protein product [Paramecium tetraurelia]) HSP 1 Score: 152.9 bits (385), Expect = 1.900e-33 Identity = 98/300 (32.67%), Postives = 141/300 (47.00%), Query Frame = 0 Query: 60 YNETLAYQLVDLCGCTYC---------CIHGCNMCTAQPSLKVTSIHSRIHDGHGFVAFDESTDTTYLAFTGTDPLALQDWFDDLNFFPEPFPDC-EGCWVDRGFYHTYLELRDQVLAILAAYHREYPTPVLHLTGHSLGGALAVFAALELIHTLGLRVSTLYTFGQPRIGNVPFQTFLQASLEASSCAHFRVTHSRDPVPHLPPSIPPTHSYGFRHEPQEVYYPCGTGRGVDGWSSRSINSSSSGDDDVCAFV-----VCDPEEGEDPRGSDQNDFPLNFVDHITYLGFPFTLNYLQCE 345 Y+E+ A L L +YC C C +P +T + ++ G+ A+ TD YL F GT P +L +W +D++F +P C C V RGFY+++L ++DQVL L + ++YP + +TGHSLGGALA AL + T G +S YTFG PR+G+ F T++ L FR+TH+ DPVPHLP I GF H QE YY D + +C+ ED S+ N L+ DH Y+G+ + L C+ Sbjct: 23 YDESFAKHLFYLTSASYCSEQHIKSWNCGKPCK--ELKPITDITFFINATNENAGYGAYHPETDEIYLVFRGTLPWSLTNWIEDIDFIKTDYPYCPNNCEVHRGFYYSFLGIQDQVLNCLKSLSKKYPLAKITITGHSLGGALANH-ALVYLTTRGFTISKFYTFGSPRVGDKNFFTYVNQQLFPG--PKFRITHNHDPVPHLPALI-----QGFHHVNQEAYY-----------------------KDYLLVIHKKVQMCNDNLKEDDSCSNSNIADLSVSDHTNYMGYDMAVELLTCQ 289
BLAST of NO20G01550 vs. NCBI_GenBank
Match: XP_001423760.1 (hypothetical protein [Paramecium tetraurelia strain d4-2] >CAK56362.1 unnamed protein product [Paramecium tetraurelia]) HSP 1 Score: 147.9 bits (372), Expect = 6.200e-32 Identity = 92/287 (32.06%), Postives = 136/287 (47.39%), Query Frame = 0 Query: 72 CGCTYC---------CIHGCNMCTAQPSLKVTSIHSRIHDGHGFVAFDESTDTTYLAFTGTDPLALQDWFDDLNFFPEPFPDC-EGCWVDRGFYHTYLELRDQVLAILAAYHREYPTPVLHLTGHSLGGALAVFAALELIHTLGLRVSTLYTFGQPRIGNVPFQTFLQASLEASSCAHFRVTHSRDPVPHLPPSIPPTHSYGFRHEPQEVYYPCGTGRGVDGWSSRSINSSSSGDDDVCAF----VVCDPEEGEDPRGSDQNDFPLNFVDHITYLGFPFTLNYLQCE 345 C +YC C C+ +++ + ++ G+ +D + + F GT P ++++WF+D+N+ FP C C V RGFY++YL ++DQVL +YP L +TGHSLGGAL+ A + L G RV Y+FG PR+G+ F ++++ + A FRVTH DPVPHLP + GF H E YY D F +C+ E+ EDPR S+QN L+ DH YLG+ + L C+ Sbjct: 44 CAASYCNPNVILNWSCTTPCSKTPYMDDVQI--FVNATNENAGYSGYDPKHNEIIIVFRGTLPWSIKNWFEDINYIKTSFPYCTNNCQVHRGFYYSYLGIQDQVLNAAKRLTSKYPNAKLVITGHSLGGALSTHALVALT-VNGYRVDHYYSFGSPRVGDSAFFNYVKSIYPS---AKFRVTHDHDPVPHLPMEV-----QGFHHINTEAYY-----------------------KDFLIFHKDVKICNDEKKEDPRCSNQNLLDLSVDDHCNYLGYNLAIGVLVCQ 296
BLAST of NO20G01550 vs. NCBI_GenBank
Match: XP_015652886.1 (putative lipase [Leptomonas pyrrhocoris] >KPA74447.1 putative lipase [Leptomonas pyrrhocoris]) HSP 1 Score: 142.9 bits (359), Expect = 2.000e-30 Identity = 110/345 (31.88%), Postives = 153/345 (44.35%), Query Frame = 0 Query: 48 PAPTPAGPQSHQYNETLAYQLVDLCGCTYC---------CIHGCNMCTAQPSLKVTSIHSRIHDGH-GFVAFDESTDTTYLAFTGTDPLALQDWFDDLNFF--PEPFPDC-EGCWVDRGFYHTYLELRDQVLAILAAYHREYPTPVLHLTGHSLGGALAVFAALE------------LIHTLGLRVST-----------------LYTFGQPRIGNVPFQTFLQASLEASSCAHFRVTHSRDPVPHLPPSIPPTHSYGFRHEPQEVYYPCGTGRGVDGWSSRSINSSSSGDDDVCAFVVCDPEEGEDPRGSDQNDFPLNFVDHITYLGFPFTLNYLQCEFSSVDE 351 PA A P + YN + +++ + C YC C C T V +++ G+ GF D +AF GT A +W DL+F+ P P P C E C + RGFY Y +R+Q+L + A H +YPT L +TGHSLGGA+AV +A+E L L + + LYTFG+PR+GNV F + + L S FRVTH+RDPVPHLPP S+G+ H PQE +YP DD D + EDP S+ + + DH+ YLG T C ++++E Sbjct: 49 PAFPDASPTAVVYNISNSWRALHFCKSAYCPVDAVVNWSCGSACGNATT--DFHVFNVYENASTGNSGFSGMDHEAGKIVVAFRGTANTA--NWIQDLDFWSMPYPHPACGELCAIHRGFYKAYDSMREQLLQDVLAMHAQYPTYSLFITGHSLGGAIAVLSAIEFTTWNLPRTHSPLADNLSVSAAVPTGVTAADDPAHLMPVELYTFGEPRVGNVYFTNWSTSVL--SQERQFRVTHARDPVPHLPP-----RSWGYLHVPQEHWYPA---------------------DDSVYMRCADRSDAEDPACSN-SVYSTTVSDHLLYLG---TCTRCSCNAATMEE 357
BLAST of NO20G01550 vs. NCBI_GenBank
Match: KRX00062.1 (hypothetical protein PPERSA_07259 [Pseudocohnilembus persalinus]) HSP 1 Score: 142.9 bits (359), Expect = 2.000e-30 Identity = 86/252 (34.13%), Postives = 121/252 (48.02%), Query Frame = 0 Query: 92 KVTSIHSRIHDGHGFVAFDESTDTTYLAFTGTDPLALQDWFDDLNFFPEPFPDCEGCWVDRGFYHTYLELRDQVLAILAAYHREYPTPVLHLTGHSLGGALAVFAALELIHTLGLRVSTLYTFGQPRIGNVPFQTFLQASLEASSCAHFRVTHSRDPVPHLPPSIPPTHSYGFRHEPQEVYYPCGTGRGVDGWSSRSINSSSSGDDDVCAFVVCDPEEGEDPRGSDQNDFPLNFVDHITYLGFPFTLNYLQC 344 ++T I S GF+ + E D +++ GT L ++ W +DLN+F +P C+GC V RGF+ + L++ +P ++LTGHSLG AL+VF A++LI G Y FGQPRIGN Q + E S RVTH RDPVPHLPP +GF H QE++Y G + +C GEDP S++ F + VDH+ Y G+ + N C Sbjct: 91 EITVIQSANKVNKGFIGYYEPLDAIVISWKGT--LKIRQWMEDLNYFKTDYPYCDGCKVHRGFWMGWQGLQNYFWVAFKKLREAHPESRIYLTGHSLGAALSVFNAMDLIQH-GYTDFVWYNFGQPRIGN---QAVIDYISENLSNQLMRVTHGRDPVPHLPPK-----DFGFSHPSQEIFY-------------------DKGSSPEKSHTLCSKTNGEDPECSNKYVFTTSVVDHVFYEGWDYVYNIGLC 312
BLAST of NO20G01550 vs. NCBI_GenBank
Match: KRX00063.1 (hypothetical protein PPERSA_07260 [Pseudocohnilembus persalinus]) HSP 1 Score: 138.3 bits (347), Expect = 4.900e-29 Identity = 81/252 (32.14%), Postives = 121/252 (48.02%), Query Frame = 0 Query: 92 KVTSIHSRIHDGHGFVAFDESTDTTYLAFTGTDPLALQDWFDDLNFFPEPFPDCEGCWVDRGFYHTYLELRDQVLAILAAYHREYPTPVLHLTGHSLGGALAVFAALELIHTLGLRVSTLYTFGQPRIGNVPFQTFLQASLEASSCAHFRVTHSRDPVPHLPPSIPPTHSYGFRHEPQEVYYPCGTGRGVDGWSSRSINSSSSGDDDVCAFVVCDPEEGEDPRGSDQNDFPLNFVDHITYLGFPFTLNYLQC 344 ++T I S GF + E D +++ GT + ++ W +D ++F +P C+GC V +GF+ + L+ +P ++LTGHSLG AL+VF A++LI G+ Y FGQPRIGN ++Q +L + RVTH +DPVPH+PP S+GF H QE++Y D + +C GEDP SD+ N VDH+ Y G+ + N C Sbjct: 91 EITVIQSANKVNKGFTGYYEPLDAIIISWKGT--IKIRQWLEDFDYFKTAYPYCDGCEVHKGFWQGWEGLQSYFWLAFNKLREAHPESKIYLTGHSLGAALSVFNAMDLIEN-GITDFVWYNFGQPRIGNQAVVDYIQNNL---TNRLMRVTHHKDPVPHVPPK-----SFGFFHPAQEIFY-------------------DKSSDPSKSHTLCSTTNGEDPTCSDKYKLDTNVVDHVFYEGWDYVYNIGLC 312
BLAST of NO20G01550 vs. NCBI_GenBank
Match: XP_008901906.1 (hypothetical protein PPTG_08907 [Phytophthora parasitica INRA-310] >ETK92078.1 hypothetical protein L915_04490 [Phytophthora parasitica] >ETL98645.1 hypothetical protein L917_04330 [Phytophthora parasitica] >ETN12893.1 hypothetical protein PPTG_08907 [Phytophthora parasitica INRA-310] >ETP49886.1 hypothetical protein F442_04664 [Phytophthora parasitica P10297]) HSP 1 Score: 136.7 bits (343), Expect = 1.400e-28 Identity = 99/295 (33.56%), Postives = 141/295 (47.80%), Query Frame = 0 Query: 59 QYNETLAYQLVDLCGCTYC----CIH-GCNMCTAQPSLKVTSIHSRIHDG-HGFVAFDESTDTTYLAFTGTDPLALQDWFDDLNFFP-EPFPDCEGCWVDRGFYHTYLELRDQVLAILAAYHREYPTPVLHLTGHSLGGALAVFAALELIHTLGLRVSTLYTFGQPRIGNVPFQTFLQ-ASLEASSCAHFRVTHSRDPVPHLPPSIPPTHSYGFRHEPQEVYYPCGTGRGVDGWSSRSINSSSSGDDDVCAFVVCDPEEGEDPRGSD-QNDFP-LNFVDHITYLGFPFTLNYLQC 344 +YNET A L + +YC IH C C PSL+ + D G V + + D +AF G+ + + +W D+L F + G V +GFY Y + QVL L +E+P L +TGHSLGGA+A A EL + + V LYTFG PR+GN F L+ AS+E +RVTH +D VPHLPP+ GF H +E++Y D+ ++ C +GEDP S+ + F + VDH+TYL T+++L C Sbjct: 54 KYNETTALYLAHVTSISYCQEQHIIHWNCQPCAFVPSLEGVKVVEDAKDNFQGLVGYSQLYDALVVAFRGS--MDVTNWLDNLTFLKRRAYAQYPGVKVHQGFYWAYRSVATQVLDTLHKLRKEHPHASLMVTGHSLGGAVAAICAFELEYIEKIPVDALYTFGNPRVGNTNFSGRLRNASMEV-----YRVTHFQDAVPHLPPTWT-----GFEHTSEEIFY----------------------DEFSSSYRTCSQTDGEDPTCSNICSPFSCTSIVDHLTYLN--ITMSHLIC 312 The following BLAST results are available for this feature:
BLAST of NO20G01550 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO20G01550 ID=NO20G01550|Name=NO20G01550|organism=Nannochloropsis oceanica|type=gene|length=1923bpback to top protein sequence of NO20G01550.1 >NO20G01550.1-protein ID=NO20G01550.1-protein|Name=NO20G01550.1|organism=Nannochloropsis oceanica|type=polypeptide|length=370bpback to top Synonyms
Publications
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