NO20G01530, NO20G01530 (gene) Nannochloropsis oceanica
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Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO20G01530 vs. NCBI_GenBank
Match: EWM22073.1 (hypothetical protein Naga_100039g14 [Nannochloropsis gaditana]) HSP 1 Score: 1101.7 bits (2848), Expect = 0.000e+0 Identity = 622/1212 (51.32%), Postives = 783/1212 (64.60%), Query Frame = 0
Query: 1 MEAITSKSIYRTAVFRPVRNTEHAVLLGRVTYPVLASFIEQFLHGDKVLEHNFRLVILSPKEPDAWLRTLLQHPRYQDRVQYLHGSPWSAQDLRRAGVGHAQAIFILADFFANDIAKDQDRILLTAVTARKYLIRQNDATIDQDSDDDEEGEETNAPRKVSSSCGIISFDRPKEKVGAEMPSLARLKSTDAAGSYSYASCSSP-PPKRQASLDADDSELPSSFLRHKSLPLLTRKPLNTYVRGAVSVLQRGISSLGSGVGQRRQQEADEELSERIVIQTHTTAAMEELTQGLGFRQAYCPHVIRLRLMAYGTVFPGLVSFFMNLLKGDPFRGDDVGHQPEWFRAFREGARQRVVRHQVLLPPDSPLKGRTFAEVARYLYRMFGIIMVGVDVNGVFLLNPHDNFRFQPNRARTVMAYFIALSKQRVREALEMLQHAHWDRMGLAASLDELPRVGLHVGDLPLPRTTLLESMQSRPGLHMHRISFGVGRGRTGVPYRSFGRTDSELGGVSGRSVDGDPVD----PNSRRASIPTYRQVKLHQEIRNQHQEMLTKAHRTLWEAYEDNQKYSRGPDNSMQQRYEVSTRRNPANVSASGGMVVATTPVEVDRRAGKSVVR--RGGKEVDEAMLGLQESSARDGLSIPXXXXXXXXXXXQSLRRTQLLPIFLESVVEKVQGARDMLTQLLDVHHSPLPEGGLHDHVVLGICNHDAPSMDSFIQYVSAFRKLIHLPIVVLCADSERFANMLQGIRQRLRQSVRPVADLKAPDTHDIFFIKGSPKKKQDLRKCCVESAYAVVLLGDDVPRRREADGEGDPVLMDRHVLLSCFKLESILRQRLYSQVLTLVDLRSAQNMHLLRQRVRAPSQLLASSTITPGFYLGRGSFHIPGSKRSSLNFGGSGGEEAHRSLSMPPDNPPVLKDHTRVSFAALAGEACTSDNHQGLAHGSDFLHQDV---HPHNDXXXXXXXXXXXXXXXXXXXXXFSAVPERAFRPEQGCPLFAAGRVCCRSFFDVFFIYLYKSPHTLKFWKEMTRSRRDDLAGEEFQMGNGMTVAEMGFEDSEIMEEMMAEGLVGXXXXXXXXXAEIPMAYNGRQLFTDTTGSSEAPPGMVDLQDSIDALRSSLDEMALPRAFIGARYGDLVDSLLHIGLVPMGLYRPRGLLDAPMPFSVVNPPPDTKVVRADLIFVLRPAAVFDAKGKGGGGMEGPAYTPGMGDESS 1203
+EAI+SKS YRTA FRPVRNTEHAVLLG +TYPVLASF+EQFLHG++ LEHNFRLVILSP EPD WL++LL+HPRYQDRV YLHGSPWSA+DLRRAG GHAQAIFI ADF DI DQDRILLTAV ARKYL+RQ D T SD++E EE N + SS G++ R K+ P K A A S+P ++ S D ++ E R S+P L+R N+Y+RGA+SVL++GISSLG + Q+E DE+LSERI+IQTHT AMEELT+GLGFR AYCPH+IRLRLMAYG FPGL+SFFM LLKGDPF G++ +PEWF+AFR G RQRVVRH++ + PDSPL+ RTFAEVARYLYR FG++MVG+++NGVFLLNPH +RF +R R V+AYFI Q V EA E L+H + +R+ + ASL E PR+ L DLP PR T L SMQ G R S R D DP D P + TY Q +LH+ +R +H++ML++AHR L EA++D+ + +R +++ RY P S + G S R + + +DE+ + S R+ + + + P+F++SVV+KVQGARDMLTQLLD +HSPLPEGGL +HVVLG+CN A S D+FIQ+VSAFRKL+H+PIVVLC DS RFA +LQG+RQRLRQ+ R V DL+AP+T DI+FIKGSPK + DL+ CCVE+AYAVVLLGDD+PRR++ GE DPVL+DRHVLLS FKLE ILR+RLY++V T+VDL + QNM LLRQRVR A S PG S +K + + G + ++M P +TR++ AG S + Q +D HQ+ H + D F +PERA PE G PLFAAGRVCCRSFFDVFFIY+YK+P+ L+ WKE+ RS DDL G+EFQ+G T +E D+E+++EM+ + AE+P Y GR L+ D+TG +APP + +LQDSID LRSSLDEM LPRAF+GARY DLVD+ +H+GLVP+GLYRPRGL+DAP+PFSVVNP PDTK+VR+DLIFVLRPA +F++ K GPA P G S+
Sbjct: 337 VEAISSKSAYRTAAFRPVRNTEHAVLLGTITYPVLASFVEQFLHGNERLEHNFRLVILSPTEPDPWLQSLLKHPRYQDRVMYLHGSPWSAEDLRRAGAGHAQAIFIQADFLGQDIQTDQDRILLTAVAARKYLVRQFDTTTFPFSDEEE--EEDNFLIRTVSSLGLLPSTRSKDASATRSPR----KPVKA-----LAHSSTPLQLDQEVSRDVENPESGLEPARQTSVPWLSRIRSNSYLRGALSVLEQGISSLGDERVREEQEEPDEQLSERIIIQTHTATAMEELTRGLGFRHAYCPHIIRLRLMAYGVAFPGLLSFFMILLKGDPFGGEERTKEPEWFKAFRGGGRQRVVRHELAVVPDSPLESRTFAEVARYLYRRFGLVMVGLEINGVFLLNPHHYYRFHSSRVRAVVAYFIVSGWQVVHEAFETLKHQNLNRLDVLASLAERPRIKLRASDLPPPRITRLRSMQCSDA--------GRARNTKSASTSSDTMVRDTFPSAGDRREDHDPKDECAPPRHAQRPSRTYHQAQLHRTLRARHKDMLSEAHRILQEAHDDHVRRTR--ESNGISRYLHDWEEMPGEASLAPSRSTDKVTENGSSSGGTSSHRETQDSESLDESAKKGRVSDTREWWRL--MPREGQEETQHCSKHSAQTPVFVDSVVKKVQGARDMLTQLLDANHSPLPEGGLRNHVVLGLCNEAAQSADTFIQFVSAFRKLLHMPIVVLCTDSNRFATLLQGLRQRLRQTSRAVRDLEAPNTRDIYFIKGSPKIRADLQYCCVENAYAVVLLGDDIPRRQDQVGERDPVLVDRHVLLSSFKLEGILRERLYTRVFTVVDLWNEQNMDLLRQRVRFSGHFSAMSAGAPGHPRLSNS-----TKAWPPHADATRGNSKFQPVAMSA-APTEALTNTRLNARHDAGALSVSRHGQ---CNTDRPHQEAYYGHRYGD-----------DVKRRSRAQSFVPIPERASLPEHGSPLFAAGRVCCRSFFDVFFIYMYKNPYALRLWKEVIRSSSDDLLGDEFQVGTCATASEGEILDAEMLKEMLGDAT--NDTGQNDVDAEVPFGYTGRDLYCDSTGLDDAPPEVENLQDSIDLLRSSLDEMPLPRAFLGARYADLVDAFMHMGLVPIGLYRPRGLMDAPLPFSVVNPSPDTKMVRSDLIFVLRPAGIFESTEK------GPAENPNAGGLSA 1497
BLAST of NO20G01530 vs. NCBI_GenBank
Match: XP_001694890.1 (predicted protein, partial [Chlamydomonas reinhardtii]) HSP 1 Score: 87.8 bits (216), Expect = 2.500e-13 Identity = 47/132 (35.61%), Postives = 75/132 (56.82%), Query Frame = 0
Query: 2 EAITSKSIYRTAVFRPVRNTEHAVLLGRVTYPVLASFIEQFLHGDKVLEHNFRLVILSPKEPDAWLRTLLQHPRYQDRVQYLHGSPWSAQDLRRAGVGHAQAIFILADFFANDIAKDQDRILLTAVTARKYL 134
E + S + Y A F H VL G VTY +FI +F H D+ + + +++L +P+ L + + ++ R++YLHGSP+ A+DL RA G+A A+F++A+ FA D A + R LLT + +YL
Sbjct: 171 EVMQSFTRYMRASFTSRGFGHHVVLTGHVTYVSAQTFISEFFHPDRGYQ-DLDVIMLRSCDPEPQLVITMNNAQWDRRIKYLHGSPFRAEDLARADTGYALAVFVMANKFAADPAAEDRRTLLTVLAIGQYL 301
BLAST of NO20G01530 vs. NCBI_GenBank
Match: PNW87416.1 (hypothetical protein CHLRE_02g146300v5 [Chlamydomonas reinhardtii]) HSP 1 Score: 87.8 bits (216), Expect = 2.500e-13 Identity = 47/132 (35.61%), Postives = 75/132 (56.82%), Query Frame = 0
Query: 2 EAITSKSIYRTAVFRPVRNTEHAVLLGRVTYPVLASFIEQFLHGDKVLEHNFRLVILSPKEPDAWLRTLLQHPRYQDRVQYLHGSPWSAQDLRRAGVGHAQAIFILADFFANDIAKDQDRILLTAVTARKYL 134
E + S + Y A F H VL G VTY +FI +F H D+ + + +++L +P+ L + + ++ R++YLHGSP+ A+DL RA G+A A+F++A+ FA D A + R LLT + +YL
Sbjct: 251 EVMQSFTRYMRASFTSRGFGHHVVLTGHVTYVSAQTFISEFFHPDRGYQ-DLDVIMLRSCDPEPQLVITMNNAQWDRRIKYLHGSPFRAEDLARADTGYALAVFVMANKFAADPAAEDRRTLLTVLAIGQYL 381
BLAST of NO20G01530 vs. NCBI_GenBank
Match: PNW87415.1 (hypothetical protein CHLRE_02g146300v5 [Chlamydomonas reinhardtii]) HSP 1 Score: 87.8 bits (216), Expect = 2.500e-13 Identity = 47/132 (35.61%), Postives = 75/132 (56.82%), Query Frame = 0
Query: 2 EAITSKSIYRTAVFRPVRNTEHAVLLGRVTYPVLASFIEQFLHGDKVLEHNFRLVILSPKEPDAWLRTLLQHPRYQDRVQYLHGSPWSAQDLRRAGVGHAQAIFILADFFANDIAKDQDRILLTAVTARKYL 134
E + S + Y A F H VL G VTY +FI +F H D+ + + +++L +P+ L + + ++ R++YLHGSP+ A+DL RA G+A A+F++A+ FA D A + R LLT + +YL
Sbjct: 251 EVMQSFTRYMRASFTSRGFGHHVVLTGHVTYVSAQTFISEFFHPDRGYQ-DLDVIMLRSCDPEPQLVITMNNAQWDRRIKYLHGSPFRAEDLARADTGYALAVFVMANKFAADPAAEDRRTLLTVLAIGQYL 381
BLAST of NO20G01530 vs. NCBI_GenBank
Match: XP_002951869.1 (hypothetical protein VOLCADRAFT_118002 [Volvox carteri f. nagariensis] >EFJ46974.1 hypothetical protein VOLCADRAFT_118002 [Volvox carteri f. nagariensis]) HSP 1 Score: 85.5 bits (210), Expect = 1.300e-12 Identity = 46/121 (38.02%), Postives = 73/121 (60.33%), Query Frame = 0
Query: 16 RPVRNTEHAVLLGRVTYPVLASFIEQFLHGDKVLEHNFRLVILSPKEPDAWLRTLLQHPRYQDRVQYLHGSPWSAQDLRRAGVGHAQAIFILADFFANDIAKDQDRILLTAVTARKYLIRQ 137
R R +H VL G VT+ +FI +F H + + + +V+L P++P+ L + +PR++ R++YL+GSP+ A+DL RA G A A+F+LA+ +A D + R LL AV A +RQ
Sbjct: 257 RSHRFGQHVVLTGHVTWLSAQTFITEFYHQGRGYQ-DLDVVVLCPRDPEPQLVITMNNPRWEQRIKYLNGSPFQAEDLARADTGRALAVFVLANKYAADPRVEDSRTLL-AVQAVAQFLRQ 375
BLAST of NO20G01530 vs. NCBI_GenBank
Match: GAQ88204.1 (Ca2+-activated K+ channel Slowpoke alpha subunit [Klebsormidium nitens]) HSP 1 Score: 82.8 bits (203), Expect = 8.100e-12 Identity = 48/146 (32.88%), Postives = 77/146 (52.74%), Query Frame = 0
Query: 4 ITSKSIYRTAVFRPVRNTEHAVLLGRVTYPVLASFIEQFLHGDKVLEHNF---RLVILSPKEPDAWLRTLLQHPRYQDRVQYLHGSPWSAQDLRRAGVGHAQAIFILADFFANDIAKDQDRILLTAVTARKYLIRQNDATIDQDSD 147
++ S+Y +RP+R H VL G +T ++ FI +F D H F LV+L+P+ P L L++ + +QY+ GSP A+DLRRA V A A F L D F +D +++ ++ A+ ++YL ++T SD
Sbjct: 294 LSLSSLYARIWYRPLRTGSHVVLCGNLTTRGVSDFITEFFDKD----HGFGDQDLVLLAPQAPSRQLELLMRASVHSRHMQYVEGSPMFAKDLRRAAVERASACFFLTDKFCHDASEEDSSSIMLALAVQQYLTDHANSTGATHSD 435
BLAST of NO20G01530 vs. NCBI_GenBank
Match: ORY38190.1 (hypothetical protein BCR33DRAFT_720897 [Rhizoclosmatium globosum]) HSP 1 Score: 82.0 bits (201), Expect = 1.400e-11 Identity = 49/142 (34.51%), Postives = 75/142 (52.82%), Query Frame = 0
Query: 2 EAITSKSIYRTAVFRPVRNTEHAVLLGRVTYPVLASFIEQFLHGDKVLEHNFRLVILSPKEPDAWLRTLLQHPRYQDRVQYLHGSPWSAQDLRRAGVGHAQAIFIL---ADFFANDIAKDQD---------RILLTAVTARK 132
E S S Y+ A + P + H +L G VTY + F ++F D N +VIL+ P +R LL+HP Y++RV YL GS SA DL+RAG +A A+F++ D ++ +A+D+ IL+ A+ +K
Sbjct: 394 EIYYSSSPYQRAQYYPSKTYAHVILSGSVTYTGIIDFCKEFFTADA----NSHVVILAQALPSLMIRKLLRHPMYRNRVHYLAGSALSAPDLKRAGAKYATALFLINEPVDTNSSSVAEDEQLKVTRGADAEILMQALVTKK 531
BLAST of NO20G01530 vs. NCBI_GenBank
Match: KXZ43950.1 (hypothetical protein GPECTOR_77g46 [Gonium pectorale]) HSP 1 Score: 80.9 bits (198), Expect = 3.100e-11 Identity = 41/111 (36.94%), Postives = 65/111 (58.56%), Query Frame = 0
Query: 23 HAVLLGRVTYPVLASFIEQFLHGDKVLEHNFRLVILSPKEPDAWLRTLLQHPRYQDRVQYLHGSPWSAQDLRRAGVGHAQAIFILADFFANDIAKDQDRILLTAVTARKYL 134
H VL G VT +FI +F H D+ + + L++L P +P+ L + + ++ RV+YLHGSP+ A+DL RA A A+F++A+ +A D A + R LL + +YL
Sbjct: 280 HVVLTGHVTPLSAQTFIGEFFHPDRGYQ-DLELLLLRPCDPEPQLVITMNNVEWERRVKYLHGSPFKAEDLARADTARALAVFVMANKYAADPAAEDTRTLLAVLAIAQYL 389
BLAST of NO20G01530 vs. NCBI_GenBank
Match: OQR82449.1 (Voltage-gated Ion Channel (VIC) Superfamily [Achlya hypogyna]) HSP 1 Score: 74.7 bits (182), Expect = 2.200e-9 Identity = 46/134 (34.33%), Postives = 72/134 (53.73%), Query Frame = 0
Query: 4 ITSKSIYRTAVFRPVRNTEHAVLLGR-VTYPVLASFIEQFLHGDKVL--------EHNFRLVILSPKEPDAWLRTLLQHPRYQDRVQYLHGSPWSAQDLRRAGVGHAQAIFILADFFAND-IAKDQDRILLTAV 128
+ +S +RTA + P N H ++LG VL F +F H D+++ + VI++P EP+ LR LL HP + +V Y+ GS + +DL R V AQA FIL D A+D +++D + +L + V
Sbjct: 312 LAMQSPFRTA-YLPELNNPHVLILGHTANATVLTEFFTEFYHPDRIVCSLGGRAAVNRIPCVIMAPHEPNEELRALLMHPLFTGKVFYVKGSILNEEDLHRVAVDRAQAAFILTDKNAHDPVSEDANAVLRSLV 444
BLAST of NO20G01530 vs. NCBI_GenBank
Match: XP_005716503.1 (unnamed protein product [Chondrus crispus] >CDF36684.1 unnamed protein product [Chondrus crispus]) HSP 1 Score: 73.6 bits (179), Expect = 4.900e-9 Identity = 39/113 (34.51%), Postives = 58/113 (51.33%), Query Frame = 0
Query: 21 TEHAVLLGRVTYPVLASFIEQFLHGDKVLEHNFRLVILSPK-EPDAWLRTLLQHPRYQDRVQYLHGSPWSAQDLRRAGVGHAQAIFILADFFANDIAKDQDRILLTAVTARKY 133
TEH V+ GRV + L F+++FL L+ ++ +P D WL+ + +P + + YL GS DL RA VG A+ +F+LAD D K+ IL +T R Y
Sbjct: 330 TEHVVVTGRVKWEFLQQFVKEFLAEASNLDTRVIILTSNPNWTDDEWLKFVAHNPFFDHHLMYLDGSALKTDDLNRAHVGAARGVFVLADPHRRDPYKEDSDILKAVLTIRNY 442 The following BLAST results are available for this feature:
BLAST of NO20G01530 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO20G01530 ID=NO20G01530|Name=NO20G01530|organism=Nannochloropsis oceanica|type=gene|length=8086bpback to top protein sequence of NO20G01530.3 >NO20G01530.3-protein ID=NO20G01530.3-protein|Name=NO20G01530.3|organism=Nannochloropsis oceanica|type=polypeptide|length=1228bpback to top protein sequence of NO20G01530.2 >NO20G01530.2-protein ID=NO20G01530.2-protein|Name=NO20G01530.2|organism=Nannochloropsis oceanica|type=polypeptide|length=1228bpback to top protein sequence of NO20G01530.1 >NO20G01530.1-protein ID=NO20G01530.1-protein|Name=NO20G01530.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1559bpback to top Synonyms
Publications
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