jgi.p|Nanoce1779_2|594767, gene_6369 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|594767
Unique Namegene_6369
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_15:469177..475131 -

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Properties
Property NameValue
TranscriptId594853
ProteinId594767
Product nameexpressed protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_15supercontigscaffold_15:469177..475131 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006813potassium ion transport
Vocabulary: Molecular Function
TermDefinition
GO:0015269calcium-activated potassium channel activity
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL020ncniL020Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO20G01530NO20G01530Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|594767mRNA_6369-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|594767mRNA_6369Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|594767

>mRNA_6369-protein ID=mRNA_6369-protein|Name=jgi.p|Nanoce1779_2|594767|organism=Nannochloropsis oceanica|type=polypeptide|length=1559bp
MEDGSMEEEGDMPLQPPLPGVATDQLAGSHTSSNHGSTTIQRVRSRPTMR
LRRKVGSLTEPAEPPFFLESEDNYERSCWSLKDMAEAYFRSFWAQFYMFS
LSILACVLYVVETYQESPYDDLILTVMEIILSLSFLVDYILTLAFALDRW
RYIVSFDGIIDLVSILPLISLLIYRFSYGEMHNAAVTWLEIGSLCRILRG
LKIFRVMRFSEPSSNMKMPYSLERDFSGPLPFDEGNTVRTRIITLCFWLC
GTIFISTGLVFFIDTHEKHKSFSLPPDMKVFTWMDALYFVSVTLATVGYG
DITPASNLSRIVVLLAIFFFLCCIPYQIGRLMEAITSKSIYRTAVFRPVR
NTEHAVLLGRVTYPVLASFIEQFLHGDKVLEHNFRLVILSPKEPDAWLRT
LLQHPRYQDRVQYLHGSPWSAQDLRRAGVGHAQAIFILADFFANDIAKDQ
DRILLTAVTARKYLIRQNDATIDQDSDDDEEGEETNAPRKVSSSCGIISF
DRPKEKVGAEMPSLARLKSTDAAGSYSYASCSSPPPKRQASLDADDSELP
SSFLRHKSLPLLTRKPLNTYVRGAVSVLQRGISSLGSGVGQRRQQEADEE
LSERIVIQTHTTAAMEELTQGLGFRQAYCPHVIRLRLMAYGTVFPGLVSF
FMNLLKGDPFRGDDVGHQPEWFRAFREGARQRVVRHQVLLPPDSPLKGRT
FAEVARYLYRMFGIIMVGVDVNGVFLLNPHDNFRFQPNRARTVMAYFIAL
SKQRVREALEMLQHVHWDRMGLAASLDELPRVGLHVGDLPLPRTTLLESM
QSRPSLHMHRISFGVGRGRTGVPYRSFGRTDSELGGVSGRSVDGDPVDPN
SRRASIPTHRQVKLHQEIRNQHQEMLTKAHRTLWEAYEDNQKYSRGPDSS
MQQRYEVSTRRNPANVSASGGMVVATTPVEVDRRAGKSVVRRGGKEVDEA
MLGLQESSARDGLSIPPPSPPQQQQHSQSLRRTQLLPIFLESVVEKVQGA
RDMLTQLLDVHHSPLPEGGLHDHVVLGICNHDAPSMDSFIQYVSAFRKLL
HLPIVVLCADSERFANMLQGIRQRLRQSVRPVADLKAPDTHDIFFIKGSP
KKKQDLRKCCVESAYAVVLLGDDVPRRREADGEGDPVLMDRHVLLSCFKL
ESILRQRLYSQVLTLVDLRSAQNMHLLRQRVRAPSQLSASSTITPGFYLG
RGSFHIPGSKRSSLNFGGSGGEEAHRSLSMPPDNPPVLKDHTRVSFAALA
GEACTSDNHQGLAHGSDFLHQDVHPHNDPHHHHHYDEEDPCARRRRRRAF
SAVPERAFRPEQGCPLFAAGRVCCRSFFDVFFIYLYKSPHTLKFWKEMTR
SRRDDLAGEEFQMGNGMTVAEMGFEDSEIMEEMMAEGLVGEEGEEGERGA
EIPMAYNGRQLFMDTTGSSEAPPGMVDLQDSIDALRSSLDEMALPRAFIG
ARYGDLVDSLLHIGLVPMGLYRPRGLLDAPMPFSVVNPPPDTKVVRADLI
FVLRPAAVFDAKGKGGGGMEGPAYTPGMGDESSTSGSFAHPLAPPIPPVQ
VRRRSDSV*
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Synonyms
Publications