NO20G01400, NO20G01400 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO20G01400 vs. NCBI_GenBank
Match: EWM22076.1 (cysteine proteinase [Nannochloropsis gaditana]) HSP 1 Score: 466.1 bits (1198), Expect = 1.700e-127 Identity = 278/548 (50.73%), Postives = 342/548 (62.41%), Query Frame = 0 Query: 26 MWERYERYVREFGKTFGSLAEKETAFQHFVQSDNYLQNF--PRSPSTLXXXXXXXXXXXXXXXXLPTFTVKHSYFSDWSPEQIQTYFS-SSFSWT---SFLGTAK-KDKGEGWVEDENEDK-HVMKDSSSSNRGSSMGPGMEHSDLSKGKKSKYHDGLQSA-------GATTASATTFDDPSFLYRPVSALSHLRPLPSSPPPGRSSLPSQLDWSIASLNPLGRSVVSPPINQGHCGGCWSIVSASVVESAVAIATHAPLTPLSAQELLDCDTSWNAGCMGGNPIESFGWVRKHGLASAASYPYHGQQQQCQLREVDSVSSIKGYKILRACDEDGIMKALAIQPVAVGVAGQKRSFLFYSGGVYDDEIEGGREGGTVVLNHALVVVGYGRDEKTGLPYWRCKNSWGKEWGEGGYVRIRRRE---------GRSEGRG------DPGVCGMALAPSVPVGAYGGNVTAWLQA---XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPFASLLPEWVQRVLMGVGGSMLLVLCAVYFYARPV 541 +WERYE YVREF KTF S +KE AF HF ++D YL+ F P S ST P+FTV HS+FSDWSPE+IQ +FS SS SW F G ++ +++G G + + ED ++ + P H+ L G S G T S+ +DP R SHL P P PP +LP+ LDWS+ SLNP GRSVVSPP+NQG CGGCWS+VSASVVESAVAI+T +P+TPLSAQELLDCD +WNAGC+GGNPI+S+ WV+KHGLA A YPY G++Q C+ R ++VS+I GY++L ACDE G+++A+A QPVAVG+AGQ SFLFY+GG+YDDE G REGG VLNHALVVVGYGRD KTG+PYW+CKNSWG+ WGE G+VRIRR E G EG G GVCG+ALAPS+P+GAYGGN TAWLQA XXXXXXXXXXXX P ASLL +RV +G+ ++L+L YF +PV Sbjct: 51 LWERYEMYVREFNKTFASTLDKEAAFSHFGRTDAYLRAFSSPSSSST--------------PPSAPSFTVGHSHFSDWSPEEIQAHFSASSVSWARAFEFPGQSQARNQGRGGLRVQEEDSTAAWRERDGAFVRDEREPVPAHTALDAFPAGLDPPGTLSGPNTRPHPGGTGTSSVPGNDPLSFLRLFPPFSHLLPPPRPPP----ALPTHLDWSLPSLNPTGRSVVSPPVNQGRCGGCWSLVSASVVESAVAISTRSPVTPLSAQELLDCDVAWNAGCLGGNPIQSYAWVKKHGLAPAQVYPYRGEEQACEARRQEAVSAITGYRVLPACDEAGLLEAVARQPVAVGIAGQHPSFLFYAGGIYDDEACGRREGGATVLNHALVVVGYGRDAKTGVPYWKCKNSWGQAWGEDGFVRIRRWETGPGAVGKGGAREGEGVLCGATGAGVCGLALAPSIPLGAYGGNATAWLQAQRMMEGKKDGVIGGQEPKKGEEXXXXXXXXXXXXSGADTDDDPIASLLSTEARRVAVGLVALLILLLGFYYFMRQPV 580
BLAST of NO20G01400 vs. NCBI_GenBank
Match: XP_021766098.1 (senescence-specific cysteine protease SAG12-like [Chenopodium quinoa]) HSP 1 Score: 171.0 bits (432), Expect = 1.100e-38 Identity = 99/240 (41.25%), Postives = 138/240 (57.50%), Query Frame = 0 Query: 216 SSLPSQLDWSIASLNPLGRSVVSPPINQGHCGGCWSIVSASVVESAVAIATHAPLTPLSAQELLDCDTSWNAGCMGGNPIESFGWVRKH-GLASAASYPYHGQQQQCQLREVDSVS-SIKGYKILRACDEDGIMKALAIQPVAVGVAGQKRSFLFYSGGVYDDEIEGGREGGTVVLNHALVVVGYGRDEKTGLPYWRCKNSWGKEWGEGGYVRIRRREGRSEGRGDPGVCGMALAPSVPV 454 +S+ S +DW + V+P NQ CG CW+ + + +E I T L LS QEL+DCDTS++ GC GG +F +++ H GL + A YPY G C + S SI G++ + +ED ++ A+A QPV+VG+ G F FY+GGV+ E G E L+HA+ V+GYG +EK G YW KNSWGKEWGE GY+RI+R G E G+CG+A+ PS P+ Sbjct: 122 NSVSSTMDWR-------KKGAVTPIKNQEDCGCCWAFSAVASMEGLNQIKT-GKLVSLSEQELVDCDTSFDEGCEGGLLDTAFEFIKSHGGLTTEAKYPYMGTDGTCNAKRAAIKSVSIHGHEDVPENNEDALLAAVAHQPVSVGIEGGGFDFQFYAGGVFKGEC--GTE-----LDHAVAVIGYGVEEKDGSKYWLVKNSWGKEWGEKGYMRIKRGGGAKE-----GLCGIAMKPSYPI 341
BLAST of NO20G01400 vs. NCBI_GenBank
Match: XP_021728557.1 (senescence-specific cysteine protease SAG12-like [Chenopodium quinoa]) HSP 1 Score: 169.5 bits (428), Expect = 3.200e-38 Identity = 97/240 (40.42%), Postives = 139/240 (57.92%), Query Frame = 0 Query: 216 SSLPSQLDWSIASLNPLGRSVVSPPINQGHCGGCWSIVSASVVESAVAIATHAPLTPLSAQELLDCDTSWNAGCMGGNPIESFGWVRKH-GLASAASYPYHGQQQQCQLREVDSVS-SIKGYKILRACDEDGIMKALAIQPVAVGVAGQKRSFLFYSGGVYDDEIEGGREGGTVVLNHALVVVGYGRDEKTGLPYWRCKNSWGKEWGEGGYVRIRRREGRSEGRGDPGVCGMALAPSVPV 454 +S+ S +DW + V+P NQ CG CW+ + + +E I T L LS QEL+DCDTS++ GC GG +F +++ H GL + A YPY G C + S SI G++ + +ED ++ A+A QPV+VG+ G F FY+GGV++ E G E L+HA+ V+GYG +EK G YW KNSWGKEWGE GY++I+R G + G+CG+A+ PS P+ Sbjct: 123 NSVSSTMDWR-------KKGAVTPIKNQEDCGCCWAFSAVASMEGLNQIKT-GKLVSLSEQELVDCDTSFDEGCEGGLLDTAFEFIKSHGGLTTEAKYPYMGTDGTCNAKRAAIKSVSIHGHEDVPENNEDALLAAVAHQPVSVGIEGGGFDFQFYAGGVFNGEC--GTE-----LDHAVAVIGYGVEEKDGSKYWLVKNSWGKEWGEKGYMKIKRGGGAKQ-----GLCGIAMKPSYPI 342
BLAST of NO20G01400 vs. NCBI_GenBank
Match: XP_012441180.1 (PREDICTED: ervatamin-B-like [Gossypium raimondii] >KJB61527.1 hypothetical protein B456_009G364300 [Gossypium raimondii]) HSP 1 Score: 168.3 bits (425), Expect = 7.200e-38 Identity = 114/349 (32.66%), Postives = 173/349 (49.57%), Query Frame = 0 Query: 126 DKGEGWVEDENED------------------KHVMKDSSSSNRGSSMGPGMEHSDLSKGKKSKYHDGLQSAGATTASATTFDDPSFLYRPVSALSHLRPLPSSPPPGRSSLPSQLDWSIASLNPLGRSVVSPPINQGHCGGCWSIVSASVVESAVAIATHAPLTPLSAQELLDCDT-SWNAGCMGGNPIESFGWV-RKHGLASAASYPYHGQQQQCQL-REVDSVSSIKGYKILRACDEDGIMKALAIQPVAVGVAGQKRSFLFYSGGVYDDEIEGGREGGTVVLNHALVVVGYGRDEKTGLPYWRCKNSWGKEWGEGGYVRIRRREGRSEGRGDPGVCGMALAPSVPV 454 DK E W+ D N +++ ++ NR + P E +D+++ + H G + G T S +T SF+Y V S +P+ LDW + + V+P QG CG CW+ + + +E V I T L LS Q+LLDC T N GC GG + +F +V R G+ + SYPY Q+ C ++++ V++I Y+++ DE+ ++K +A QPV+V + G + F FYSGGV+ + L+HA+ VVGYG E+ GL YW KNSWG+ WGE GY+RI+R + G+CG+A+ S PV Sbjct: 32 DKHEEWMVDYNRKYESKLEKEKRLNIFKENLEYIESFNNGGNRSFKLSPN-EFADMTQDEFIAAHTGYKMQGNPTLSEST----SFMYENV-----------------SDVPTNLDWRV-------QGAVTPVKFQGQCGCCWAFSAVAAIEGIVQIKT-GSLISLSEQQLLDCSTDGGNRGCDGGRMVNAFEYVIRNQGITTEESYPYQETQETCDTEKQINKVATINEYQMVPENDEEALLKVVASQPVSVAIEGHGQDFRFYSGGVFTGDCGN-------ALSHAVTVVGYGTSEE-GLNYWLVKNSWGETWGEKGYIRIQR-----DANTPGGLCGIAMKASYPV 337
BLAST of NO20G01400 vs. NCBI_GenBank
Match: OWM73350.1 (hypothetical protein CDL15_Pgr001464 [Punica granatum]) HSP 1 Score: 167.9 bits (424), Expect = 9.500e-38 Identity = 100/239 (41.84%), Postives = 135/239 (56.49%), Query Frame = 0 Query: 216 SSLPSQLDWSIASLNPLGRSVVSPPINQGHCGGCWSIVSASVVESAVAIATHAPLTPLSAQELLDCDT-SWNAGCMGGNPIESFGWVRKHGLASAASYPYHGQQQQCQLR-EVDSVSSIKGYKILRACDEDGIMKALAIQPVAVGVAGQKRSFLFYSGGVYDDEIEGGREGGTVVLNHALVVVGYGRDEKTGLPYWRCKNSWGKEWGEGGYVRIRRREGRSEGRGDPGVCGMALAPSVP 453 +S+PS +DW + V+P NQ CG CW+ VE AI T L LS QEL+DCD S N GC GG SF +V +HGL S A+YPY + C ++ E + V+ I GYK + A DE+ +MKA++ QPV+V + F FY GG++ GT V++HA++VVGYG E G+ YW KNSWG EWGE GY+R++R E G+CG+A+ S P Sbjct: 123 TSVPSSVDWR-------EKGAVTPIKNQEECGCCWAFSVVGAVEGIHAITT-GKLVSLSEQELVDCDVGSENQGCNGGWMDSSFEFVVQHGLTSEANYPYAAADEMCNVKEESEPVARISGYKDVPANDEEALMKAVSFQPVSVAIDASGFEFQFYKGGIFKGPC------GT-VMDHAVLVVGYGTTE-DGVKYWLVKNSWGTEWGEHGYIRMQRLVKAKE-----GLCGIAMKASYP 340
BLAST of NO20G01400 vs. NCBI_GenBank
Match: PKI62908.1 (hypothetical protein CRG98_016745 [Punica granatum]) HSP 1 Score: 167.9 bits (424), Expect = 9.500e-38 Identity = 100/239 (41.84%), Postives = 135/239 (56.49%), Query Frame = 0 Query: 216 SSLPSQLDWSIASLNPLGRSVVSPPINQGHCGGCWSIVSASVVESAVAIATHAPLTPLSAQELLDCDT-SWNAGCMGGNPIESFGWVRKHGLASAASYPYHGQQQQCQLR-EVDSVSSIKGYKILRACDEDGIMKALAIQPVAVGVAGQKRSFLFYSGGVYDDEIEGGREGGTVVLNHALVVVGYGRDEKTGLPYWRCKNSWGKEWGEGGYVRIRRREGRSEGRGDPGVCGMALAPSVP 453 +S+PS +DW + V+P NQ CG CW+ VE AI T L LS QEL+DCD S N GC GG SF +V +HGL S A+YPY + C ++ E + V+ I GYK + A DE+ +MKA++ QPV+V + F FY GG++ GT V++HA++VVGYG E G+ YW KNSWG EWGE GY+R++R E G+CG+A+ S P Sbjct: 90 TSVPSSVDWR-------EKGAVTPIKNQEECGCCWAFSVVGAVEGIHAITT-GKLVSLSEQELVDCDVGSENQGCNGGWMDSSFEFVVQHGLTSEANYPYAAADEMCNVKEESEPVARISGYKDVPANDEEALMKAVSFQPVSVAIDASGFEFQFYKGGIFKGPC------GT-VMDHAVLVVGYGTTE-DGVKYWLVKNSWGTEWGEHGYIRMQRLVKAKE-----GLCGIAMKASYP 307
BLAST of NO20G01400 vs. NCBI_GenBank
Match: XP_020701392.1 (thiol protease SEN102-like [Dendrobium catenatum] >PKU60871.1 Thiol protease SEN102 [Dendrobium catenatum]) HSP 1 Score: 167.5 bits (423), Expect = 1.200e-37 Identity = 94/238 (39.50%), Postives = 141/238 (59.24%), Query Frame = 0 Query: 217 SLPSQLDWSIASLNPLGRSVVSPPINQGHCGGCWSIVSASVVESAVAIATHAPLTPLSAQELLDCDTSWNAGCMGGNPIESFGWVRKH-GLASAASYPYHGQQQQCQLREVDSVSSIKGYKILRACDEDGIMKALAIQPVAVGVAGQKRSFLFYSGGVYDDEIEGGREGGTVVLNHALVVVGYGRDEKTGLPYWRCKNSWGKEWGEGGYVRIRRREGRSEGRGDPGVCGMALAPSVPV 454 SLP+ +DW + V+P +QG CG CW+ + + VE I T L PLS QEL+DCDT N+GC GG +F +++K+ G+ S A+YPY + C + + V SI G++ + A DE+ ++KA+A QPV++ + F FYS GV+ GR G L+H + +VGYG+ ++ G YW +NSWG +WGEGGY+R+ R G S+ + G+CG+A+ PS P+ Sbjct: 127 SLPASVDWR-------QKGAVAPVKDQGQCGSCWAFSTVAAVEGINQIKT-KKLIPLSEQELIDCDTEQNSGCNGGLMDYAFEYIQKNGGITSEAAYPYAAEDGSCAVEKSAHVVSIDGHQDVPANDENSLLKAVANQPVSIAIEASGFGFQFYSEGVFT-----GRCG--TDLDHGVAIVGYGKTQQ-GTKYWIVRNSWGADWGEGGYIRMHR--GISDRK---GLCGLAIEPSYPI 343
BLAST of NO20G01400 vs. NCBI_GenBank
Match: XP_002180011.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC48202.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 166.8 bits (421), Expect = 2.100e-37 Identity = 105/273 (38.46%), Postives = 141/273 (51.65%), Query Frame = 0 Query: 222 LDWSIASLNPLGRSVVSPPINQGHCGGCWSIVSASVVES------------------------------AVAIATHAPLTP-----LSAQELLDCDTSWNAGCMGGNPIESFGWVRKHGLASAASYPYHGQQQQCQLREVD-SVSSIKGYKILRACDEDGIMKALA-IQPVAVGVAGQKRSFLFYSGGVYDDEIEGGREGGTVVLNHALVVVGYGRDEKTG---LPYWRCKNSWGKEWGEGGYVRIRRREGRSEGRGDPGVCGMALAPSVPVG 455 L+W+ S NP G +V +QG CG CW+ +A +E+ A+A A L LS QELLDCD + + GC GGNP+ SF ++ K+GL S YPY G Q C V V+++K + I+ + ED + L I PVAVGV G SFL Y GGVYD NHAL++VGYG++ + G YW +NSWG WGE GY+R++R +GR +G PGVCG+A +PSV +G Sbjct: 278 LNWATGS-NPDGVPIVHGAFDQGLCGSCWAFAAAGSLEASASRRAAYDAYKGYQTTFFRQPSNETARTRAIAYAQQIELEAFQMLNLSVQELLDCDVAADQGCTGGNPLLSFYYIHKYGLTSWQDYPYVGFQDVCHKDRVKRPVATVKSWGIISSNHEDHMELVLRFIGPVAVGVNGASSSFLSYKGGVYD------MPSCKQTANHALLIVGYGQEVQIGGNVTRYWIARNSWGTGWGENGYIRVQRGDGR---KGTPGVCGIARSPSVALG 540
BLAST of NO20G01400 vs. NCBI_GenBank
Match: PPD69201.1 (hypothetical protein GOBAR_DD33920 [Gossypium barbadense]) HSP 1 Score: 166.8 bits (421), Expect = 2.100e-37 Identity = 93/241 (38.59%), Postives = 137/241 (56.85%), Query Frame = 0 Query: 216 SSLPSQLDWSIASLNPLGRSVVSPPINQGHCGGCWSIVSASVVESAVAIATHAPLTPLSAQELLDCDT-SWNAGCMGGNPIESFGWV-RKHGLASAASYPYHGQQQQCQL-REVDSVSSIKGYKILRACDEDGIMKALAIQPVAVGVAGQKRSFLFYSGGVYDDEIEGGREGGTVVLNHALVVVGYGRDEKTGLPYWRCKNSWGKEWGEGGYVRIRRREGRSEGRGDPGVCGMALAPSVPV 454 S +P+ LDW + + V+P QG CG CW+ + + +E V I T L LS Q+LLDC T N GC GG + +F +V R G+ + SYPY Q+ C ++++ V++I Y+++ DE+ ++K +A QPV+V + G + F FYSGGV+ + L+HA+ VVGYG E+ GL YW KNSWG+ WGE GY+RI+R + G+CG+A+ S PV Sbjct: 27 SDVPTNLDWRV-------QGAVTPVKFQGQCGCCWAFSAVAAIEGIVQIKT-GSLISLSEQQLLDCSTDGGNRGCDGGRMVNAFEYVIRNQGITTEESYPYQETQETCDTEKQINKVATINEYQMVPENDEEALLKVVASQPVSVAIEGHGQDFRFYSGGVFTGDCGN-------ALSHAVTVVGYGTSEE-GLNYWLVKNSWGETWGEKGYIRIQR-----DANTPGGLCGIAMKASYPV 246
BLAST of NO20G01400 vs. NCBI_GenBank
Match: XP_001697622.1 (cysteine endopeptidase [Chlamydomonas reinhardtii]) HSP 1 Score: 165.6 bits (418), Expect = 4.700e-37 Identity = 95/240 (39.58%), Postives = 131/240 (54.58%), Query Frame = 0 Query: 217 SLPSQLDWSIASLNPLGRSVVSPPINQGHCGGCWSIVSASVVESAVAIATHAPLTPLSAQELLDCDTSWNAGCMGGNPIESFGWVRKH-GLASAASYPYHGQQQQCQLREVD-SVSSIKGYKILRACDEDGIMKALAIQPVAVGVAGQKRSFLFYSGGVYDDEIEGGREGGTVVLNHALVVVGYGRD-EKTGLPYWRCKNSWGKEWGEGGYVRIRRREGRSEGRGDPGVCGMALAPSVPV 454 +LP +DW ++ V+ NQG CG CW+ + VE AI T L LS QEL+DCDT + GC GG ++ W+ K+ G+ + YPY QC + ++ V +I Y+ + DE + KA A QPVAV + +SF Y GGVYDD G LNH ++VVGYG+D +G YW KNSWG EWG+ GY+R++ +E G+CG+A+APS PV Sbjct: 101 ALPPAIDWR-------KKNAVAEVKNQGQCGSCWAFATTGSVEGINAIVT-GSLVSLSEQELVDCDTEQDKGCSGGLMDYAYAWIIKNKGINTEEDYPYTAMDGQCDVAKMKRRVVTIDSYEDVPENDEVALKKAAAHQPVAVAIEADAKSFQLYGGGVYDDPTCG------TSLNHGVLVVGYGKDVTGSGSNYWIVKNSWGAEWGDAGYIRLKMGSTDAE-----GLCGIAMAPSYPV 321 The following BLAST results are available for this feature:
BLAST of NO20G01400 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO20G01400 ID=NO20G01400|Name=NO20G01400|organism=Nannochloropsis oceanica|type=gene|length=3333bpback to top protein sequence of NO20G01400.1 >NO20G01400.1-protein ID=NO20G01400.1-protein|Name=NO20G01400.1|organism=Nannochloropsis oceanica|type=polypeptide|length=604bpback to top Synonyms
Publications
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