NO20G01400, NO20G01400 (gene) Nannochloropsis oceanica

Overview
NameNO20G01400
Unique NameNO20G01400
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3333
Alignment locationchr20:425081..428413 -

Link to JBrowse

Properties
Property NameValue
DescriptionCysteine proteinase
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr20genomechr20:425081..428413 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006508proteolysis
GO:0006508proteolysis
Vocabulary: Molecular Function
TermDefinition
GO:0008234cysteine-type peptidase activity
GO:0008234cysteine-type peptidase activity
Vocabulary: INTERPRO
TermDefinition
IPR038765Papain_like_cys_pep_sf
IPR013128Peptidase_C1A
IPR000668Peptidase_C1A_C
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO:0016020membrane
Homology
BLAST of NO20G01400 vs. NCBI_GenBank
Match: EWM22076.1 (cysteine proteinase [Nannochloropsis gaditana])

HSP 1 Score: 466.1 bits (1198), Expect = 1.700e-127
Identity = 278/548 (50.73%), Postives = 342/548 (62.41%), Query Frame = 0
Query:   26 MWERYERYVREFGKTFGSLAEKETAFQHFVQSDNYLQNF--PRSPSTLXXXXXXXXXXXXXXXXLPTFTVKHSYFSDWSPEQIQTYFS-SSFSWT---SFLGTAK-KDKGEGWVEDENEDK-HVMKDSSSSNRGSSMGPGMEHSDLSKGKKSKYHDGLQSA-------GATTASATTFDDPSFLYRPVSALSHLRPLPSSPPPGRSSLPSQLDWSIASLNPLGRSVVSPPINQGHCGGCWSIVSASVVESAVAIATHAPLTPLSAQELLDCDTSWNAGCMGGNPIESFGWVRKHGLASAASYPYHGQQQQCQLREVDSVSSIKGYKILRACDEDGIMKALAIQPVAVGVAGQKRSFLFYSGGVYDDEIEGGREGGTVVLNHALVVVGYGRDEKTGLPYWRCKNSWGKEWGEGGYVRIRRRE---------GRSEGRG------DPGVCGMALAPSVPVGAYGGNVTAWLQA---XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPFASLLPEWVQRVLMGVGGSMLLVLCAVYFYARPV 541
            +WERYE YVREF KTF S  +KE AF HF ++D YL+ F  P S ST                  P+FTV HS+FSDWSPE+IQ +FS SS SW     F G ++ +++G G +  + ED     ++   +       P   H+ L          G  S        G T  S+   +DP    R     SHL P P  PP    +LP+ LDWS+ SLNP GRSVVSPP+NQG CGGCWS+VSASVVESAVAI+T +P+TPLSAQELLDCD +WNAGC+GGNPI+S+ WV+KHGLA A  YPY G++Q C+ R  ++VS+I GY++L ACDE G+++A+A QPVAVG+AGQ  SFLFY+GG+YDDE  G REGG  VLNHALVVVGYGRD KTG+PYW+CKNSWG+ WGE G+VRIRR E         G  EG G        GVCG+ALAPS+P+GAYGGN TAWLQA                      XXXXXXXXXXXX        P ASLL    +RV +G+   ++L+L   YF  +PV
Sbjct:   51 LWERYEMYVREFNKTFASTLDKEAAFSHFGRTDAYLRAFSSPSSSST--------------PPSAPSFTVGHSHFSDWSPEEIQAHFSASSVSWARAFEFPGQSQARNQGRGGLRVQEEDSTAAWRERDGAFVRDEREPVPAHTALDAFPAGLDPPGTLSGPNTRPHPGGTGTSSVPGNDPLSFLRLFPPFSHLLPPPRPPP----ALPTHLDWSLPSLNPTGRSVVSPPVNQGRCGGCWSLVSASVVESAVAISTRSPVTPLSAQELLDCDVAWNAGCLGGNPIQSYAWVKKHGLAPAQVYPYRGEEQACEARRQEAVSAITGYRVLPACDEAGLLEAVARQPVAVGIAGQHPSFLFYAGGIYDDEACGRREGGATVLNHALVVVGYGRDAKTGVPYWKCKNSWGQAWGEDGFVRIRRWETGPGAVGKGGAREGEGVLCGATGAGVCGLALAPSIPLGAYGGNATAWLQAQRMMEGKKDGVIGGQEPKKGEEXXXXXXXXXXXXSGADTDDDPIASLLSTEARRVAVGLVALLILLLGFYYFMRQPV 580          
BLAST of NO20G01400 vs. NCBI_GenBank
Match: XP_021766098.1 (senescence-specific cysteine protease SAG12-like [Chenopodium quinoa])

HSP 1 Score: 171.0 bits (432), Expect = 1.100e-38
Identity = 99/240 (41.25%), Postives = 138/240 (57.50%), Query Frame = 0
Query:  216 SSLPSQLDWSIASLNPLGRSVVSPPINQGHCGGCWSIVSASVVESAVAIATHAPLTPLSAQELLDCDTSWNAGCMGGNPIESFGWVRKH-GLASAASYPYHGQQQQCQLREVDSVS-SIKGYKILRACDEDGIMKALAIQPVAVGVAGQKRSFLFYSGGVYDDEIEGGREGGTVVLNHALVVVGYGRDEKTGLPYWRCKNSWGKEWGEGGYVRIRRREGRSEGRGDPGVCGMALAPSVPV 454
            +S+ S +DW         +  V+P  NQ  CG CW+  + + +E    I T   L  LS QEL+DCDTS++ GC GG    +F +++ H GL + A YPY G    C  +     S SI G++ +   +ED ++ A+A QPV+VG+ G    F FY+GGV+  E   G E     L+HA+ V+GYG +EK G  YW  KNSWGKEWGE GY+RI+R  G  E     G+CG+A+ PS P+
Sbjct:  122 NSVSSTMDWR-------KKGAVTPIKNQEDCGCCWAFSAVASMEGLNQIKT-GKLVSLSEQELVDCDTSFDEGCEGGLLDTAFEFIKSHGGLTTEAKYPYMGTDGTCNAKRAAIKSVSIHGHEDVPENNEDALLAAVAHQPVSVGIEGGGFDFQFYAGGVFKGEC--GTE-----LDHAVAVIGYGVEEKDGSKYWLVKNSWGKEWGEKGYMRIKRGGGAKE-----GLCGIAMKPSYPI 341          
BLAST of NO20G01400 vs. NCBI_GenBank
Match: XP_021728557.1 (senescence-specific cysteine protease SAG12-like [Chenopodium quinoa])

HSP 1 Score: 169.5 bits (428), Expect = 3.200e-38
Identity = 97/240 (40.42%), Postives = 139/240 (57.92%), Query Frame = 0
Query:  216 SSLPSQLDWSIASLNPLGRSVVSPPINQGHCGGCWSIVSASVVESAVAIATHAPLTPLSAQELLDCDTSWNAGCMGGNPIESFGWVRKH-GLASAASYPYHGQQQQCQLREVDSVS-SIKGYKILRACDEDGIMKALAIQPVAVGVAGQKRSFLFYSGGVYDDEIEGGREGGTVVLNHALVVVGYGRDEKTGLPYWRCKNSWGKEWGEGGYVRIRRREGRSEGRGDPGVCGMALAPSVPV 454
            +S+ S +DW         +  V+P  NQ  CG CW+  + + +E    I T   L  LS QEL+DCDTS++ GC GG    +F +++ H GL + A YPY G    C  +     S SI G++ +   +ED ++ A+A QPV+VG+ G    F FY+GGV++ E   G E     L+HA+ V+GYG +EK G  YW  KNSWGKEWGE GY++I+R  G  +     G+CG+A+ PS P+
Sbjct:  123 NSVSSTMDWR-------KKGAVTPIKNQEDCGCCWAFSAVASMEGLNQIKT-GKLVSLSEQELVDCDTSFDEGCEGGLLDTAFEFIKSHGGLTTEAKYPYMGTDGTCNAKRAAIKSVSIHGHEDVPENNEDALLAAVAHQPVSVGIEGGGFDFQFYAGGVFNGEC--GTE-----LDHAVAVIGYGVEEKDGSKYWLVKNSWGKEWGEKGYMKIKRGGGAKQ-----GLCGIAMKPSYPI 342          
BLAST of NO20G01400 vs. NCBI_GenBank
Match: XP_012441180.1 (PREDICTED: ervatamin-B-like [Gossypium raimondii] >KJB61527.1 hypothetical protein B456_009G364300 [Gossypium raimondii])

HSP 1 Score: 168.3 bits (425), Expect = 7.200e-38
Identity = 114/349 (32.66%), Postives = 173/349 (49.57%), Query Frame = 0
Query:  126 DKGEGWVEDENED------------------KHVMKDSSSSNRGSSMGPGMEHSDLSKGKKSKYHDGLQSAGATTASATTFDDPSFLYRPVSALSHLRPLPSSPPPGRSSLPSQLDWSIASLNPLGRSVVSPPINQGHCGGCWSIVSASVVESAVAIATHAPLTPLSAQELLDCDT-SWNAGCMGGNPIESFGWV-RKHGLASAASYPYHGQQQQCQL-REVDSVSSIKGYKILRACDEDGIMKALAIQPVAVGVAGQKRSFLFYSGGVYDDEIEGGREGGTVVLNHALVVVGYGRDEKTGLPYWRCKNSWGKEWGEGGYVRIRRREGRSEGRGDPGVCGMALAPSVPV 454
            DK E W+ D N                    +++   ++  NR   + P  E +D+++ +    H G +  G  T S +T    SF+Y  V                 S +P+ LDW +       +  V+P   QG CG CW+  + + +E  V I T   L  LS Q+LLDC T   N GC GG  + +F +V R  G+ +  SYPY   Q+ C   ++++ V++I  Y+++   DE+ ++K +A QPV+V + G  + F FYSGGV+  +           L+HA+ VVGYG  E+ GL YW  KNSWG+ WGE GY+RI+R     +     G+CG+A+  S PV
Sbjct:   32 DKHEEWMVDYNRKYESKLEKEKRLNIFKENLEYIESFNNGGNRSFKLSPN-EFADMTQDEFIAAHTGYKMQGNPTLSEST----SFMYENV-----------------SDVPTNLDWRV-------QGAVTPVKFQGQCGCCWAFSAVAAIEGIVQIKT-GSLISLSEQQLLDCSTDGGNRGCDGGRMVNAFEYVIRNQGITTEESYPYQETQETCDTEKQINKVATINEYQMVPENDEEALLKVVASQPVSVAIEGHGQDFRFYSGGVFTGDCGN-------ALSHAVTVVGYGTSEE-GLNYWLVKNSWGETWGEKGYIRIQR-----DANTPGGLCGIAMKASYPV 337          
BLAST of NO20G01400 vs. NCBI_GenBank
Match: OWM73350.1 (hypothetical protein CDL15_Pgr001464 [Punica granatum])

HSP 1 Score: 167.9 bits (424), Expect = 9.500e-38
Identity = 100/239 (41.84%), Postives = 135/239 (56.49%), Query Frame = 0
Query:  216 SSLPSQLDWSIASLNPLGRSVVSPPINQGHCGGCWSIVSASVVESAVAIATHAPLTPLSAQELLDCDT-SWNAGCMGGNPIESFGWVRKHGLASAASYPYHGQQQQCQLR-EVDSVSSIKGYKILRACDEDGIMKALAIQPVAVGVAGQKRSFLFYSGGVYDDEIEGGREGGTVVLNHALVVVGYGRDEKTGLPYWRCKNSWGKEWGEGGYVRIRRREGRSEGRGDPGVCGMALAPSVP 453
            +S+PS +DW         +  V+P  NQ  CG CW+      VE   AI T   L  LS QEL+DCD  S N GC GG    SF +V +HGL S A+YPY    + C ++ E + V+ I GYK + A DE+ +MKA++ QPV+V +      F FY GG++          GT V++HA++VVGYG  E  G+ YW  KNSWG EWGE GY+R++R     E     G+CG+A+  S P
Sbjct:  123 TSVPSSVDWR-------EKGAVTPIKNQEECGCCWAFSVVGAVEGIHAITT-GKLVSLSEQELVDCDVGSENQGCNGGWMDSSFEFVVQHGLTSEANYPYAAADEMCNVKEESEPVARISGYKDVPANDEEALMKAVSFQPVSVAIDASGFEFQFYKGGIFKGPC------GT-VMDHAVLVVGYGTTE-DGVKYWLVKNSWGTEWGEHGYIRMQRLVKAKE-----GLCGIAMKASYP 340          
BLAST of NO20G01400 vs. NCBI_GenBank
Match: PKI62908.1 (hypothetical protein CRG98_016745 [Punica granatum])

HSP 1 Score: 167.9 bits (424), Expect = 9.500e-38
Identity = 100/239 (41.84%), Postives = 135/239 (56.49%), Query Frame = 0
Query:  216 SSLPSQLDWSIASLNPLGRSVVSPPINQGHCGGCWSIVSASVVESAVAIATHAPLTPLSAQELLDCDT-SWNAGCMGGNPIESFGWVRKHGLASAASYPYHGQQQQCQLR-EVDSVSSIKGYKILRACDEDGIMKALAIQPVAVGVAGQKRSFLFYSGGVYDDEIEGGREGGTVVLNHALVVVGYGRDEKTGLPYWRCKNSWGKEWGEGGYVRIRRREGRSEGRGDPGVCGMALAPSVP 453
            +S+PS +DW         +  V+P  NQ  CG CW+      VE   AI T   L  LS QEL+DCD  S N GC GG    SF +V +HGL S A+YPY    + C ++ E + V+ I GYK + A DE+ +MKA++ QPV+V +      F FY GG++          GT V++HA++VVGYG  E  G+ YW  KNSWG EWGE GY+R++R     E     G+CG+A+  S P
Sbjct:   90 TSVPSSVDWR-------EKGAVTPIKNQEECGCCWAFSVVGAVEGIHAITT-GKLVSLSEQELVDCDVGSENQGCNGGWMDSSFEFVVQHGLTSEANYPYAAADEMCNVKEESEPVARISGYKDVPANDEEALMKAVSFQPVSVAIDASGFEFQFYKGGIFKGPC------GT-VMDHAVLVVGYGTTE-DGVKYWLVKNSWGTEWGEHGYIRMQRLVKAKE-----GLCGIAMKASYP 307          
BLAST of NO20G01400 vs. NCBI_GenBank
Match: XP_020701392.1 (thiol protease SEN102-like [Dendrobium catenatum] >PKU60871.1 Thiol protease SEN102 [Dendrobium catenatum])

HSP 1 Score: 167.5 bits (423), Expect = 1.200e-37
Identity = 94/238 (39.50%), Postives = 141/238 (59.24%), Query Frame = 0
Query:  217 SLPSQLDWSIASLNPLGRSVVSPPINQGHCGGCWSIVSASVVESAVAIATHAPLTPLSAQELLDCDTSWNAGCMGGNPIESFGWVRKH-GLASAASYPYHGQQQQCQLREVDSVSSIKGYKILRACDEDGIMKALAIQPVAVGVAGQKRSFLFYSGGVYDDEIEGGREGGTVVLNHALVVVGYGRDEKTGLPYWRCKNSWGKEWGEGGYVRIRRREGRSEGRGDPGVCGMALAPSVPV 454
            SLP+ +DW         +  V+P  +QG CG CW+  + + VE    I T   L PLS QEL+DCDT  N+GC GG    +F +++K+ G+ S A+YPY  +   C + +   V SI G++ + A DE+ ++KA+A QPV++ +      F FYS GV+      GR G    L+H + +VGYG+ ++ G  YW  +NSWG +WGEGGY+R+ R  G S+ +   G+CG+A+ PS P+
Sbjct:  127 SLPASVDWR-------QKGAVAPVKDQGQCGSCWAFSTVAAVEGINQIKT-KKLIPLSEQELIDCDTEQNSGCNGGLMDYAFEYIQKNGGITSEAAYPYAAEDGSCAVEKSAHVVSIDGHQDVPANDENSLLKAVANQPVSIAIEASGFGFQFYSEGVFT-----GRCG--TDLDHGVAIVGYGKTQQ-GTKYWIVRNSWGADWGEGGYIRMHR--GISDRK---GLCGLAIEPSYPI 343          
BLAST of NO20G01400 vs. NCBI_GenBank
Match: XP_002180011.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC48202.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 166.8 bits (421), Expect = 2.100e-37
Identity = 105/273 (38.46%), Postives = 141/273 (51.65%), Query Frame = 0
Query:  222 LDWSIASLNPLGRSVVSPPINQGHCGGCWSIVSASVVES------------------------------AVAIATHAPLTP-----LSAQELLDCDTSWNAGCMGGNPIESFGWVRKHGLASAASYPYHGQQQQCQLREVD-SVSSIKGYKILRACDEDGIMKALA-IQPVAVGVAGQKRSFLFYSGGVYDDEIEGGREGGTVVLNHALVVVGYGRDEKTG---LPYWRCKNSWGKEWGEGGYVRIRRREGRSEGRGDPGVCGMALAPSVPVG 455
            L+W+  S NP G  +V    +QG CG CW+  +A  +E+                              A+A A    L       LS QELLDCD + + GC GGNP+ SF ++ K+GL S   YPY G Q  C    V   V+++K + I+ +  ED +   L  I PVAVGV G   SFL Y GGVYD              NHAL++VGYG++ + G     YW  +NSWG  WGE GY+R++R +GR   +G PGVCG+A +PSV +G
Sbjct:  278 LNWATGS-NPDGVPIVHGAFDQGLCGSCWAFAAAGSLEASASRRAAYDAYKGYQTTFFRQPSNETARTRAIAYAQQIELEAFQMLNLSVQELLDCDVAADQGCTGGNPLLSFYYIHKYGLTSWQDYPYVGFQDVCHKDRVKRPVATVKSWGIISSNHEDHMELVLRFIGPVAVGVNGASSSFLSYKGGVYD------MPSCKQTANHALLIVGYGQEVQIGGNVTRYWIARNSWGTGWGENGYIRVQRGDGR---KGTPGVCGIARSPSVALG 540          
BLAST of NO20G01400 vs. NCBI_GenBank
Match: PPD69201.1 (hypothetical protein GOBAR_DD33920 [Gossypium barbadense])

HSP 1 Score: 166.8 bits (421), Expect = 2.100e-37
Identity = 93/241 (38.59%), Postives = 137/241 (56.85%), Query Frame = 0
Query:  216 SSLPSQLDWSIASLNPLGRSVVSPPINQGHCGGCWSIVSASVVESAVAIATHAPLTPLSAQELLDCDT-SWNAGCMGGNPIESFGWV-RKHGLASAASYPYHGQQQQCQL-REVDSVSSIKGYKILRACDEDGIMKALAIQPVAVGVAGQKRSFLFYSGGVYDDEIEGGREGGTVVLNHALVVVGYGRDEKTGLPYWRCKNSWGKEWGEGGYVRIRRREGRSEGRGDPGVCGMALAPSVPV 454
            S +P+ LDW +       +  V+P   QG CG CW+  + + +E  V I T   L  LS Q+LLDC T   N GC GG  + +F +V R  G+ +  SYPY   Q+ C   ++++ V++I  Y+++   DE+ ++K +A QPV+V + G  + F FYSGGV+  +           L+HA+ VVGYG  E+ GL YW  KNSWG+ WGE GY+RI+R     +     G+CG+A+  S PV
Sbjct:   27 SDVPTNLDWRV-------QGAVTPVKFQGQCGCCWAFSAVAAIEGIVQIKT-GSLISLSEQQLLDCSTDGGNRGCDGGRMVNAFEYVIRNQGITTEESYPYQETQETCDTEKQINKVATINEYQMVPENDEEALLKVVASQPVSVAIEGHGQDFRFYSGGVFTGDCGN-------ALSHAVTVVGYGTSEE-GLNYWLVKNSWGETWGEKGYIRIQR-----DANTPGGLCGIAMKASYPV 246          
BLAST of NO20G01400 vs. NCBI_GenBank
Match: XP_001697622.1 (cysteine endopeptidase [Chlamydomonas reinhardtii])

HSP 1 Score: 165.6 bits (418), Expect = 4.700e-37
Identity = 95/240 (39.58%), Postives = 131/240 (54.58%), Query Frame = 0
Query:  217 SLPSQLDWSIASLNPLGRSVVSPPINQGHCGGCWSIVSASVVESAVAIATHAPLTPLSAQELLDCDTSWNAGCMGGNPIESFGWVRKH-GLASAASYPYHGQQQQCQLREVD-SVSSIKGYKILRACDEDGIMKALAIQPVAVGVAGQKRSFLFYSGGVYDDEIEGGREGGTVVLNHALVVVGYGRD-EKTGLPYWRCKNSWGKEWGEGGYVRIRRREGRSEGRGDPGVCGMALAPSVPV 454
            +LP  +DW         ++ V+   NQG CG CW+  +   VE   AI T   L  LS QEL+DCDT  + GC GG    ++ W+ K+ G+ +   YPY     QC + ++   V +I  Y+ +   DE  + KA A QPVAV +    +SF  Y GGVYDD   G        LNH ++VVGYG+D   +G  YW  KNSWG EWG+ GY+R++     +E     G+CG+A+APS PV
Sbjct:  101 ALPPAIDWR-------KKNAVAEVKNQGQCGSCWAFATTGSVEGINAIVT-GSLVSLSEQELVDCDTEQDKGCSGGLMDYAYAWIIKNKGINTEEDYPYTAMDGQCDVAKMKRRVVTIDSYEDVPENDEVALKKAAAHQPVAVAIEADAKSFQLYGGGVYDDPTCG------TSLNHGVLVVGYGKDVTGSGSNYWIVKNSWGAEWGDAGYIRLKMGSTDAE-----GLCGIAMAPSYPV 321          
The following BLAST results are available for this feature:
BLAST of NO20G01400 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM22076.11.700e-12750.73cysteine proteinase [Nannochloropsis gaditana][more]
XP_021766098.11.100e-3841.25senescence-specific cysteine protease SAG12-like [... [more]
XP_021728557.13.200e-3840.42senescence-specific cysteine protease SAG12-like [... [more]
XP_012441180.17.200e-3832.66PREDICTED: ervatamin-B-like [Gossypium raimondii] ... [more]
OWM73350.19.500e-3841.84hypothetical protein CDL15_Pgr001464 [Punica grana... [more]
PKI62908.19.500e-3841.84hypothetical protein CRG98_016745 [Punica granatum... [more]
XP_020701392.11.200e-3739.50thiol protease SEN102-like [Dendrobium catenatum] ... [more]
XP_002180011.12.100e-3738.46predicted protein [Phaeodactylum tricornutum CCAP ... [more]
PPD69201.12.100e-3738.59hypothetical protein GOBAR_DD33920 [Gossypium barb... [more]
XP_001697622.14.700e-3739.58cysteine endopeptidase [Chlamydomonas reinhardtii][more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL023nonsL023Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL021nonsL021Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR020ncniR020Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR067ngnoR067Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO20G01400.1NO20G01400.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|543886gene_6356Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100039g23gene8344Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO20G01400.1NO20G01400.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO20G01400 ID=NO20G01400|Name=NO20G01400|organism=Nannochloropsis oceanica|type=gene|length=3333bp
TATATGTGTGTGTGTATGTGTGTGTGTGTATGTGTGTGTGTGTGTGTATG
ATATGATAAATGAGAAGAGTAGGCACTCCCGGGCAGACTCTCTCTTTGTA
CTGAGATTTACATGCACTCACCACTCCTCCTGGAGGGAGGGAAGGAGGGA
AGCAGAAACGAAGTTTTTCCAGACCAGTGCCAATGACAGAACGGTATGCC
TCGCGTCTCCTGTCCTCCCTCTAACTTACTCCCTCCCTCCCTCCCTCCCT
CCCTCCCTACCCAAGAAATCCATCCCCCCTGCATTGATGCCTGTCGGCAT
TCACCAAGAGCCAGTTTAAGACGTCATCCGCAGGCTTGGGCGTATGGAGA
GGAAGGGAAAGAGGGGGAGAGGGAGGGAGGGAGAAAGGGAGGGAGGGAGG
GAGGGGAGAAGACGTTTTGAGCGCTGCATCCCAATGCTAAGCACATTAGG
ACTTGACCTGCCTTGTGTCTTTTTTCTTTTGAGTGTACCCTGGGGACAGC
TTTTTATAATCCTATGATCATAAAATTACCGCGTGGAAGCTATCCGCAGA
CAAATGCAAACGCAAGTGTTTACATAATCGTGCCTCCTCTCAGGATTACA
ACACGAGGGAAAGCCTTCCAACAAAAAAATGCTGCATATTATTCTCTTAT
TTCTGCCAAGATTTCAATAACTTTGACAGATGTTTTATCAGTAAAGTCCT
TTTATCGCCCATACAGAGCTAGGAGGAGGGGGGAAAAAGAGGAGGTCAGG
GGGAAGGCAACTTAGTATAAGTGGTAAGCGTCCGCATCACCTGCCACGTT
TATTCATAAGCATCCCGAAGAAGGCCGACACTCCGCGCAGAGCGTCACGT
CTGTCTTGTCTTGTATGCTCGAGATCTCGCTATAGTACTCCTCAGAATAA
TGAAATCTCCATCTTAATAATACATAATATATGTGTGTATTATGTGTGTA
CCTTTCTTAATTTGAAATATATTCCGAGAAAACGATAGGCGATGCAAACC
TCCTCATCTCAACTTGTCATTAGCATCCCTTCTTCATTCACAACTGCTCT
ACAAGACCCACACCGCTCAATAATCACATTCTTATCGACGGCGTTCTCGC
TTTCTTGCACTAATCCGCCACACAGGCTCGGGGTGGAAGAGGGGGAATCG
AAGAAGGAGGAAGGAGGACCCAGAGCCTTCAACCCCCCCTCTACAAATGC
CGCTCCTCGTCCTCTTCCTGCTGCTGCCCGTCCTCTGCCGTGGTTGGGGA
GCAGTTGTCGCTGAGACGCATATGTGGGAGCGCTACGAGCGCTATGTGAG
GGAATTTGGCAAAgtaagcttgatgtgtgaggacaaatgaggaggaaaac
gcaaacgtcatgcaagattcatgtcgcactcttgacagacgagccgaagt
tgacacccccttctcacccactcacactcactcccatcccactatttcct
agACATTTGGATCGCTTGCCGAGAAAGAGACAGCATTCCAGCATTTTGTA
CAGTCCGACAACTACTTGCAGAACTTCCCGCGCTCTCCCTCCACCCTATC
CGAGTCATCCTCACCCTCATCCTCCTCCTCCTCCTCCTCCTCCTTTCTTC
CCACCTTCACCGTCAAGCACTCATACTTCAGCGATTGGAGTCCAGAGCAA
ATCCAGACATATTTTTCCTCGTCATTTTCATGGACTTCTTTCCTGGGCAC
AGCCAAGAAGGACAAGGGGGAGGGATGGGTCGAGGACGAGAACGAGGATA
AGCACGTAATGAAGGACAGCAGTAGCAGCAACAGGGGCAGCAGCATGGGC
CCAGGTATGGAGCACTCTGATTTGTCAAAGGGTAAGAAGAGTAAATACCA
TGATGGGTTACAGTCAGCAGGAGCGACAACAGCATCAGCAACCACCTTCG
ACGATCCCTCCTTCCTCTACCGCCCCGTCTCCGCCCTCTCCCACCTGCGG
CCCCTCCCTTCGTCCCCCCCTCCTGGCAGATCCTCCCTCCCCTCGCAACT
AGACTGGAGCATCGCCAGCCTCAACCCTCTAGGTCGTTCCGTGGTGTCCC
CTCCTATAAATCAGGGACATTGTGGGGGGTGCTGGTCGATCGTCAGTGCG
TCCGTCGTGGAGTCAGCTGTCGCCATTGCTACGCATGCGCCACTCACCCC
CCTTTCCGCCCAAGAGCTCCTTGATTGTGATACAAGCTGGAATGCGGGCT
GTATGGGGGGTAACCCTATTGAGTCCTTCGGGTGGGTGAGAAAGCATGGG
TTAGCATCAGCGGCCTCTTACCCTTACCACGGACAGCAGCAACAGTGTCA
GCTGCGGGAAGTAGACAGTGTGAGCTCGATAAAGGGATACAAAATTCTCC
GGGCCTGCGATGAGGATGGAATAATGAAAGCGCTCGCGATTCAGCCTGTT
GCGGTTGGTGTGGCAGGTCAGAAGAGGTCGTTCTTGTTTTACTCTGGTGG
GGTCTATGATGACGAGATTGAGGGAGGGAGGGAGGGAGGGACGGTGGTCT
TGAACCATGCACTGGTGGTGGTGGGGTACGGAAGGGATGAGAAAACAGGC
TTGCCGTACTGGCGGTGTAAGAATTCATGGGGAAAGGAGTGGGGGGAGGG
GGGGTATGTGCGCATTAGACGGAGGGAAGGAAGGAGTGAGGGACGGGGGG
ATCCTGGAGTGTGTGGGATGGCATTGGCACCGTCGGTGCCAGTGGGGGCT
TATGGAGGGAATGTGACTGCGTGGTTGCAGGCGAGGAGAAGGGAAGAAGG
TGGAAGGAAATACCAGAAGAAGGGCGTTGGTGATAAGGGAGGAGGAGGGG
GGGAGGACGGGGGAGGAACGACGGACCCGAGTAGTATTGACGATGACGGA
CCGTTTGCTTCCTTGTTGCCTGAGTGGGTGCAGCGTGTTCTGATGGGAGT
AGGGGGATCGATGCTGCTTGTGCTGTGTGCAGTCTATTTTTATGCACGGC
CTGTTGACAGCTCCACGCCTCCTACCACTGCTCCTACTGCTGCTACTGCT
GCTGCTGCTGCTGGTGCTACTACTGCTACCGGGCAAGGGTATCAGCGGGT
ATGGAACAGGAGAGGGATGAGGGGGAGGGAGGAGGTGGGAGAGGAAGCAG
CGTTGGGAGATGGGGGAGGGGAGGAATCAAAGTACGGGGCGGTGTGAGAA
ACAAATGAATCATTAAATAAATGTGATGTCTCCAATTTTATTGATATTTC
CCAGAAGAGAGTTTTGTGTAAAAAGCTGCCGAGAGGGTAGAGAAGAGAAG
CAGAGGCACGGCACAGCTCGATGTGTAAAGCGACAAGGATCTCTCGTTAC
TTTTTTTAAACCAAAAATTAAAATAAAAAAGGA
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protein sequence of NO20G01400.1

>NO20G01400.1-protein ID=NO20G01400.1-protein|Name=NO20G01400.1|organism=Nannochloropsis oceanica|type=polypeptide|length=604bp
MPLLVLFLLLPVLCRGWGAVVAETHMWERYERYVREFGKTFGSLAEKETA
FQHFVQSDNYLQNFPRSPSTLSESSSPSSSSSSSSSFLPTFTVKHSYFSD
WSPEQIQTYFSSSFSWTSFLGTAKKDKGEGWVEDENEDKHVMKDSSSSNR
GSSMGPGMEHSDLSKGKKSKYHDGLQSAGATTASATTFDDPSFLYRPVSA
LSHLRPLPSSPPPGRSSLPSQLDWSIASLNPLGRSVVSPPINQGHCGGCW
SIVSASVVESAVAIATHAPLTPLSAQELLDCDTSWNAGCMGGNPIESFGW
VRKHGLASAASYPYHGQQQQCQLREVDSVSSIKGYKILRACDEDGIMKAL
AIQPVAVGVAGQKRSFLFYSGGVYDDEIEGGREGGTVVLNHALVVVGYGR
DEKTGLPYWRCKNSWGKEWGEGGYVRIRRREGRSEGRGDPGVCGMALAPS
VPVGAYGGNVTAWLQARRREEGGRKYQKKGVGDKGGGGGEDGGGTTDPSS
IDDDGPFASLLPEWVQRVLMGVGGSMLLVLCAVYFYARPVDSSTPPTTAP
TAATAAAAAGATTATGQGYQRVWNRRGMRGREEVGEEAALGDGGGEESKY
GAV*
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Synonyms
Publications