NO20G01260, NO20G01260 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO20G01260 vs. NCBI_GenBank
Match: XP_005854490.1 (dolichyldiphosphatase, partial [Nannochloropsis gaditana CCMP526] >XP_005855565.1 dolichyldiphosphatase, partial [Nannochloropsis gaditana CCMP526] >EKU20796.1 dolichyldiphosphatase, partial [Nannochloropsis gaditana CCMP526] >EKU21871.1 dolichyldiphosphatase, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 211.5 bits (537), Expect = 3.000e-51 Identity = 111/166 (66.87%), Postives = 132/166 (79.52%), Query Frame = 0 Query: 8 STPPPSSPFSSSFSQSTLLKGFELVGKSTRWTVASLVAVVLLLRRDAAMVNFTVGAILNALLGKTLKRIIKEARPDGAVLEDPGMPSSHAMALFYMTSFITAALCESKGLGGALPLWWPFNYITTISSVILYVLTASSWRVFSGLHTPAQILVGAXXXXXXXXXWQ 174 S+PPPSS S S L+ F+L+GKSTRWTVASLVAV+LL+RRDAA+VNFTVGAILNA+LGK LKR+IKEARPDGAVLEDPGMPSSHAMALFYM++F+ +ALC+ +G+ G LP WWP + + TI+ LYV AS+WRVFSGLHT AQILVGA W+ Sbjct: 109 SSPPPSSLMSFKTSS---LQAFQLLGKSTRWTVASLVAVMLLVRRDAAIVNFTVGAILNAMLGKILKRLIKEARPDGAVLEDPGMPSSHAMALFYMSAFLGSALCQKRGI-GVLPPWWPLDVLPTIALGGLYVSVASAWRVFSGLHTSAQILVGAGVGGGVGLAWE 270
BLAST of NO20G01260 vs. NCBI_GenBank
Match: CEL96694.1 (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 133.7 bits (335), Expect = 7.900e-28 Identity = 81/234 (34.62%), Postives = 125/234 (53.42%), Query Frame = 0 Query: 13 SSPFSSSFSQSTLLKGFELVGKSTRWTVASLVAVVLLLRRDAAMVNFTVGAILNALLGKTLKRIIKEARPDGAVLEDPGMPSSHAMALFYMTSFITAALCESKGLGGALPLWWPFNYITTISSVILYVLTASSWRVFSGLHTPAQILVGAXXXXXXXXXWQFKCRTRMNEEVGRWLYARFEGGRVPLSYLVGVMIIGALTVGSVERKFAKAMRQILRYVG------EEEGRKDK 241 S+ +F + L G S R+ V+ LV + L++RRDAA+ + +G++LNA+LGK LKR+ +RPD A + DPGMPSSHAM+L +++ + A+ ++ LP WW + + V Y L ++ WRV + LHT Q+ VG W + +N+ + R +P +LVG+ ++G+LTVGSVERK K ++R G + RKDK Sbjct: 114 STMVGEAFFDGAIAPLMALCGLSARFLVSGLVFLALVMRRDAAVTVWVIGSLLNAVLGKVLKRLFNHSRPDEATVSDPGMPSSHAMSLSFLSVSLIRAIIDA----DRLPAWWRLDKRWAVVLVSSYALLSAVWRVRANLHTSEQVAVGGAVGGTVGLVWYQLGKNGINKWMERQFVLMTGKPLLPWGWLVGICLLGSLTVGSVERKIHKL---LVRLTGGAVKRDDSSDRKDK 340
BLAST of NO20G01260 vs. NCBI_GenBank
Match: XP_005838618.1 (hypothetical protein GUITHDRAFT_134529 [Guillardia theta CCMP2712] >EKX51638.1 hypothetical protein GUITHDRAFT_134529 [Guillardia theta CCMP2712]) HSP 1 Score: 130.6 bits (327), Expect = 6.700e-27 Identity = 78/197 (39.59%), Postives = 117/197 (59.39%), Query Frame = 0 Query: 32 VGKSTRWTVASLVAVVLLLRRDAAMVNFTVGAILNALLGKTLKRIIKEARPDGAVLEDPGMPSSHAMALFYMTSFITAALCESKGLGGALPLW--WPFNYITTI-SSVILYVLTASSWRVFSGLHTPAQILVGAXXXXXXXXXWQFKCRTRMNEEVGRWLYARFEGGRVPLSYLVGVMIIGALTVGSVERKFAKAMR 226 + K+TRW V+ A L+ RRDA + GA+ NA LGK LKR++ E RPDGA + DPGMPSSHAM+LF+++ +++A A+ +W WP T + SS++++ +++WRV +G HTPAQILVG+ W + M ++ + E +P + L G +I+GAL VGSVERK +K ++ Sbjct: 25 IAKNTRWLVSLTAAAFLIWRRDAVTIAAIGGALGNAALGKLLKRLLAEKRPDGAPVSDPGMPSSHAMSLFFLSLYLSA----------AINVWTDWPMAARTIVTSSLLIFSTYSAAWRVRAGFHTPAQILVGSVLGGFNGMAWFYFNHQNMAALQRLDVFLK-ESSALPWA-LCGSLIVGALLVGSVERKISKFLK 209
BLAST of NO20G01260 vs. NCBI_GenBank
Match: XP_005782275.1 (hypothetical protein EMIHUDRAFT_233403 [Emiliania huxleyi CCMP1516] >EOD29846.1 hypothetical protein EMIHUDRAFT_233403 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 104.4 bits (259), Expect = 5.200e-19 Identity = 80/201 (39.80%), Postives = 102/201 (50.75%), Query Frame = 0 Query: 36 TRWTVASLVAVVLLLRRDAAMVNFTVGAILNALLGKTLKRIIKEARPDGAVLEDPGMPSSHAMALFYMTSFIT--AALCESKGLGGALPLWWPFNYIT---------TISSVILYVLTASSWRVFSGLHTPAQILVGAXXXXXXXXXWQFKCRTRMNEEVGRWLYARFEGGRVPLSYLVGVMIIGALTVGSVERKFAKAMR 226 T+W V+ +VLL+RRDAA V F GAI NALL K LKR+I ARP GA L DPGMPSSHA +L Y F+ A E+ L L P ++ +S + LTA RV +GLHTPAQ VGA F + L + R P++ + GV+++GA VGSVER A M+ Sbjct: 6 TKWLVSGSAFIVLLVRRDAATVTFLCGAIGNALLSKVLKRLINAARPAGARLSDPGMPSSHAQSLSYFAVFLALGAETWEATLPPRLLHLSRPLMLLSPPLLRHAGAALSLALGAALTA--LRVRAGLHTPAQCAVGAAIGGLNGACCFFTMPACV-------LALQALQARHPVALVGGVLLLGAAVVGSVERTLAARMK 197
BLAST of NO20G01260 vs. NCBI_GenBank
Match: XP_002521546.1 (PREDICTED: lipid phosphate phosphatase epsilon 2, chloroplastic [Ricinus communis] >EEF40817.1 conserved hypothetical protein [Ricinus communis]) HSP 1 Score: 99.0 bits (245), Expect = 2.200e-17 Identity = 63/193 (32.64%), Postives = 98/193 (50.78%), Query Frame = 0 Query: 17 SSSFSQSTLLKGFE-LVGKSTRWTVASLVAVVLLLRRDAAMVNFTVGAILNALLGKTLKRIIKEARPDGAVLEDPGMPSSHAMALFYMTSFITAALCESKGLGGALPLWWPFNYITTISSVILYVLTASSW-RVFSGLHTPAQILVGAXXXXXXXXXWQFKCRTRMNEEVGRWLYARFEGGRVPLSYLVGVMI 208 SS F + +GFE L+ + ++W VA+L VVLL R DA + +G++LNA+L TLKR+ + RP DPGMPSSHA +FY F + ++ E G+ + IS + L + + SW RV HT +Q++VGA W + +T + +E L+ R S+ +G ++ Sbjct: 85 SSDFRSQLMARGFEPLLNRLSKWLVAALFGVVLLWRHDAEALWIAMGSVLNAILSVTLKRVFNQERPFATAKSDPGMPSSHAQCIFYTVVFCSLSVTEWLGVN---------EFTLLISGLNLALGSYFSWLRVSQQYHTASQVVVGAAAGSLFSFLWYWLWQTIVLDEFNSSLWVRIVVVFAAFSFCLGFLL 268
BLAST of NO20G01260 vs. NCBI_GenBank
Match: XP_009040747.1 (hypothetical protein AURANDRAFT_67050 [Aureococcus anophagefferens] >EGB04642.1 hypothetical protein AURANDRAFT_67050 [Aureococcus anophagefferens]) HSP 1 Score: 94.7 bits (234), Expect = 4.100e-16 Identity = 67/193 (34.72%), Postives = 98/193 (50.78%), Query Frame = 0 Query: 26 LKGFELVGKSTRWTVASLVAVVLLLRRDAAMVNFTVGAILNALLGKTLKRIIKEARPDGAVLEDPGMPSSHAMALFYMTSFITAALCESKGLGGALPLWWPFNYITTISSVILYVLTASSWRVFSGLHTPAQILVGAXXXXXXXXXWQFKCRTRMNEEVGRWLYARFEGGRVPLSYLVGVMIIGALTVGSVER 219 ++ FE VG+STR+ V+ VA LL RRDA + + +GAIL A+ K LKRIIKE RP +D GMPSSHA ++ ++ G+G L P +++ Y L + +WRV + HT AQ++VGA F T + +PL +++ V +GA+ VGS+ER Sbjct: 764 MRAFEAVGESTRFAVSGAVATTLLARRDAETLLWVLGAILAAVCNKVLKRIIKEERPTEG--DDGGMPSSHACSVLHL------------GVGAVLRFPMPPGLPAALAA---YGLVSLAWRVHARYHTTAQVVVGA----------AFGAATAVLFRAASLRLEPALPATIPLPWILSVYGVGAVVVGSLER 929
BLAST of NO20G01260 vs. NCBI_GenBank
Match: CBJ30239.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 94.0 bits (232), Expect = 7.000e-16 Identity = 58/157 (36.94%), Postives = 75/157 (47.77%), Query Frame = 0 Query: 24 TLLKGFEL----VGKSTRWTVASLVAVVLLLRRDAAMVNFTVGAILNALLGKTLKRIIKEARPDGAVLEDPGMPSSHAMALFYMTSFITAALCESKGLGGALPLWWPFNYITTISSVILYVLTASSWRVFSGLHTPAQILVGAXXXXXXXXXWQFKC 177 TLL G EL +G ST+W VA V V L+ R D + + +G+++NA+ K LK+ I + RPDGA L DPGMPSSHAM T + + +Y LTAS WRV +G HT Q+ VGA W C Sbjct: 6 TLLAGIELGLDVLGSSTQWAVAGAVGVALITRADVDTLVYVLGSLINAVFSKVLKKTINQVRPDGAQLSDPGMPSSHAM---------------------------------TQTLLGMYALTASLWRVKAGFHTLPQVAVGAAVGAVDAVLWYHLC 129
BLAST of NO20G01260 vs. NCBI_GenBank
Match: XP_021912435.1 (lipid phosphate phosphatase epsilon 1, chloroplastic-like [Carica papaya]) HSP 1 Score: 90.9 bits (224), Expect = 5.900e-15 Identity = 57/173 (32.95%), Postives = 90/173 (52.02%), Query Frame = 0 Query: 21 SQSTLLKGFE-LVGKSTRWTVASLVAVVLLLRRDAAMVNFTVGAILNALLGKTLKRIIKEARPDGAVLEDPGMPSSHAMALFYMTSFITAALCESKGLGGALPLWWPFNYITTISSVILYVLTASSW-RVFSGLHTPAQILVGAXXXXXXXXXWQFKCRTRMNEEVGRWLYAR 192 S L GFE ++ + ++W VA+L V+L R DA + +G+++NA+L LKRI+ + RP + DPGMPSSHA ++FY + F ++ E G+ + TI+ +IL + SW RV LHT +QI VGA W + ++E +L+ + Sbjct: 93 SNGLLASGFESILNRLSKWLVAALFGGVILWRHDAEALWVAMGSVINAMLSVVLKRILNQERPFSTMRSDPGMPSSHAQSIFYTSMFAVLSVVEWLGIN---------EFSLTINGLILAFGSYLSWLRVSQRLHTISQIGVGAAVGSLFSILWYLFWKAIVSEAFASYLWVQ 256
BLAST of NO20G01260 vs. NCBI_GenBank
Match: PIN15770.1 (Dolichyl pyrophosphate phosphatase [Handroanthus impetiginosus]) HSP 1 Score: 90.5 bits (223), Expect = 7.700e-15 Identity = 54/165 (32.73%), Postives = 86/165 (52.12%), Query Frame = 0 Query: 19 SFSQSTLLKGF---------ELVGKSTRWTVASLVAVVLLLRRDAAMVNFTVGAILNALLGKTLKRIIKEARPDGAVLEDPGMPSSHAMALFYMTSFITAALCESKGLGGALPLWWPFNYITTISSVILYVL-TASSW-RVFSGLHTPAQILVGAXXXXXXXXXW 173 +F Q L++G ++ ++W VA L + ++LLR DA + +GA+LNA+L LK+++ + RP + DPGMPSSHA ++FY +F+ ++ E W+ N +TT S ++L + SW RV LHT Q++VGA W Sbjct: 75 AFEQEALVEGSLTFADGGLEAILNSLSKWFVAVLFSALILLRHDAEALWAAMGAVLNAILSIALKKVLNQERPTSTLRSDPGMPSSHAQSIFYTIAFLNLSIVE----------WYAMNILTTTLSGFFFILGSYFSWLRVSQKLHTLGQVIVGAVIGTLFSIFW 229
BLAST of NO20G01260 vs. NCBI_GenBank
Match: XP_011083196.1 (lipid phosphate phosphatase epsilon 2, chloroplastic isoform X1 [Sesamum indicum]) HSP 1 Score: 88.6 bits (218), Expect = 2.900e-14 Identity = 50/129 (38.76%), Postives = 77/129 (59.69%), Query Frame = 0 Query: 36 TRWTVASLVAVVLLLRRDAAMVNFTVGAILNALLGKTLKRIIKEARPDGAVLEDPGMPSSHAMALFYMTSFITAALCESKGLGGALPLWWPFNYIT-TISSVILYVLTASSW-RVFSGLHTPAQILVGA 163 ++W V++L A ++L R DA + +GA+LNA+L TLK+++ + RP DPGMPSSHA ++FY +F+ ++ E W+ N +T T+S L V + SW RV LHT +Q++VGA Sbjct: 97 SKWFVSALFAAIILWRHDAEALWAAMGAVLNAVLSITLKKVLNQERPISTSRSDPGMPSSHAQSIFYTITFLNLSMLE----------WYGVNALTATLSGFFLIVGSYFSWLRVSQRLHTLSQVIVGA 215 The following BLAST results are available for this feature:
BLAST of NO20G01260 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO20G01260 ID=NO20G01260|Name=NO20G01260|organism=Nannochloropsis oceanica|type=gene|length=729bpback to top protein sequence of NO20G01260.1 >NO20G01260.1-protein ID=NO20G01260.1-protein|Name=NO20G01260.1|organism=Nannochloropsis oceanica|type=polypeptide|length=243bpback to top Synonyms
Publications
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