NO20G01190, NO20G01190 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO20G01190 vs. NCBI_GenBank
Match: EWM22136.1 (snf7 family protein [Nannochloropsis gaditana]) HSP 1 Score: 209.5 bits (532), Expect = 1.100e-50 Identity = 112/147 (76.19%), Postives = 125/147 (85.03%), Query Frame = 0 Query: 2 FGFGKKLDPVEEAKKWKRNIGREVRXXXXXXXXXXXXXXXXXXEIKKLAKEGDSRRGALTILAKDLVRSRKTREKMVGGKAMLTSVQMQIQMQISTIKVAGCMQKSADVLKSLNALVKIPELSHVCQEMAREMEKAGLVEELVSDAM 149 FGFGKK++P+EEAKK KR+IGRE+R EI+KLAK+G++RRGALTILAKDLVRSRKTREKMVGGKAML SVQMQIQMQ+STIKVAGCMQKSADVLK+LNALVKIPELS VCQEMAREME+AGLVEE+V DAM Sbjct: 63 FGFGKKVEPMEEAKKLKRSIGREIRSVDRTLIHIEREERKIVKEIQKLAKQGETRRGALTILAKDLVRSRKTREKMVGGKAMLASVQMQIQMQMSTIKVAGCMQKSADVLKTLNALVKIPELSKVCQEMAREMERAGLVEEMVGDAM 209
BLAST of NO20G01190 vs. NCBI_GenBank
Match: CBJ27710.1 (similar to vacuolar protein sorting 24 homolog [Ectocarpus siliculosus]) HSP 1 Score: 118.6 bits (296), Expect = 2.400e-23 Identity = 65/143 (45.45%), Postives = 92/143 (64.34%), Query Frame = 0 Query: 6 KKLDPVEEAKKWKRNIGREVRXXXXXXXXXXXXXXXXXXEIKKLAKEGDSRRGALTILAKDLVRSRKTREKMVGGKAMLTSVQMQIQMQISTIKVAGCMQKSADVLKSLNALVKIPELSHVCQEMAREMEKAGLVEELVSDAM 149 +K+DP E+AK+W+R+I EVR +IK +AKEG A+ +LAK+LV SR + +M GKA L SVQMQ+Q QI+ IKV G ++KS +++ S+ LVKIPEL ++A EME+AGLVEE+V+D + Sbjct: 7 RKVDPEEQAKEWRRSINHEVRALERQIVSLERAEKKVQKDIKTMAKEGTRNEKAIRLLAKELVMSRNAKNRMHEGKAQLHSVQMQLQNQIALIKVTGVIKKSTEIMASIGDLVKIPELQENMFQLATEMERAGLVEEVVADGL 149
BLAST of NO20G01190 vs. NCBI_GenBank
Match: PRP72802.1 (SNF7 family protein [Planoprotostelium fungivorum]) HSP 1 Score: 117.1 bits (292), Expect = 7.100e-23 Identity = 65/148 (43.92%), Postives = 91/148 (61.49%), Query Frame = 0 Query: 1 MFGFGKKLDPVEEAKKWKRNIGREVRXXXXXXXXXXXXXXXXXXEIKKLAKEGDSRRGALTILAKDLVRSRKTREKMVGGKAMLTSVQMQIQMQISTIKVAGCMQKSADVLKSLNALVKIPELSHVCQEMAREMEKAGLVEELVSDAM 149 MF FGK+ P E KKW+R + +E R IK LAK+GD + + ILAK++VRSR +EK+ KA L SV MQ+Q +S +K+AG M KSA ++ S+N L+K+P+L M REMEKAGL+EE+++DA+ Sbjct: 75 MFLFGKRPSPEELVKKWRRELTKEQRLLDRQIRAIDLAEQKTIRSIKDLAKKGD--KSSAKILAKEIVRSRAAKEKIYKSKAQLNSVGMQLQQNLSMMKLAGVMSKSATIMTSMNDLIKLPQLHQTMMVMGREMEKAGLIEEMMTDAL 220
BLAST of NO20G01190 vs. NCBI_GenBank
Match: XP_016605210.1 (hypothetical protein SPPG_07557 [Spizellomyces punctatus DAOM BR117] >KNC97170.1 hypothetical protein SPPG_07557 [Spizellomyces punctatus DAOM BR117]) HSP 1 Score: 107.8 bits (268), Expect = 4.300e-20 Identity = 55/144 (38.19%), Postives = 90/144 (62.50%), Query Frame = 0 Query: 5 GKKLDPVEEAKKWKRNIGREVRXXXXXXXXXXXXXXXXXXEIKKLAKEGDSRRGALTILAKDLVRSRKTREKMVGGKAMLTSVQMQIQMQISTIKVAGCMQKSADVLKSLNALVKIPELSHVCQEMAREMEKAGLVEELVSDAM 149 GK+L P E+ KKW++ + + R +K+ AK D+ + +LAK++VRSRK R+++ KA L S+ M +Q Q++T+K++G +QKS DV+K +N LVK+PE+S + EM EM KAG++EE++ D++ Sbjct: 10 GKRLSPEEQVKKWRQTVRAQERELEKSMRGIDAEEAKVKRALKQAAKRNDTT--SCKLLAKEIVRSRKARDRLYTSKAQLNSLTMHMQQQLATMKISGTLQKSTDVMKLVNNLVKLPEISSIMSEMGAEMMKAGIIEEMMQDSI 151
BLAST of NO20G01190 vs. NCBI_GenBank
Match: CEG80669.1 (Putative Vacuolar protein-sorting-associated protein [Rhizopus microsporus]) HSP 1 Score: 105.9 bits (263), Expect = 1.600e-19 Identity = 61/145 (42.07%), Postives = 91/145 (62.76%), Query Frame = 0 Query: 4 FGKKLDPVEEAKKWKRNIGREVRXXXXXXXXXXXXXXXXXXEIKKLAKEGDSRRGALTILAKDLVRSRKTREKMVGGKAMLTSVQMQIQMQISTIKVAGCMQKSADVLKSLNALVKIPELSHVCQEMAREMEKAGLVEELVSDAM 149 FGKK P E KKW++ I + R IK++AK+GD + +LAK+L+RS++ + ++ KA L S+ MQ++ Q++TIKVAG +QKS +V+K +N LVK+PELS Q+M+ EM KAGL+EE++ D M Sbjct: 9 FGKK-TPDELVKKWRQEIRAQQRSIQKQITAIDNEEAKVKRSIKQVAKKGDVKN--CKMLAKELIRSQRHKNRLYTSKAQLNSIIMQLEHQLATIKVAGSLQKSGEVMKLVNQLVKLPELSQSMQQMSMEMTKAGLMEEMIGDTM 150
BLAST of NO20G01190 vs. NCBI_GenBank
Match: CEG71719.1 (hypothetical protein RMATCC62417_07405 [Rhizopus microsporus]) HSP 1 Score: 105.9 bits (263), Expect = 1.600e-19 Identity = 61/145 (42.07%), Postives = 91/145 (62.76%), Query Frame = 0 Query: 4 FGKKLDPVEEAKKWKRNIGREVRXXXXXXXXXXXXXXXXXXEIKKLAKEGDSRRGALTILAKDLVRSRKTREKMVGGKAMLTSVQMQIQMQISTIKVAGCMQKSADVLKSLNALVKIPELSHVCQEMAREMEKAGLVEELVSDAM 149 FGKK P E KKW++ I + R IK++AK+GD + +LAK+L+RS++ + ++ KA L S+ MQ++ Q++TIKVAG +QKS +V+K +N LVK+PELS Q+M+ EM KAGL+EE++ D M Sbjct: 9 FGKK-TPDELVKKWRQEIRAQQRSIQKQITAIDNEEAKVKRSIKQVAKKGDVKN--CKMLAKELIRSQRHKNRLYTSKAQLNSIIMQLEHQLATIKVAGSLQKSGEVMKLVNQLVKLPELSQSMQQMSMEMTKAGLMEEMIGDTM 150
BLAST of NO20G01190 vs. NCBI_GenBank
Match: CEI97251.1 (hypothetical protein RMCBS344292_11387 [Rhizopus microsporus]) HSP 1 Score: 105.9 bits (263), Expect = 1.600e-19 Identity = 61/145 (42.07%), Postives = 91/145 (62.76%), Query Frame = 0 Query: 4 FGKKLDPVEEAKKWKRNIGREVRXXXXXXXXXXXXXXXXXXEIKKLAKEGDSRRGALTILAKDLVRSRKTREKMVGGKAMLTSVQMQIQMQISTIKVAGCMQKSADVLKSLNALVKIPELSHVCQEMAREMEKAGLVEELVSDAM 149 FGKK P E KKW++ I + R IK++AK+GD + +LAK+L+RS++ + ++ KA L S+ MQ++ Q++TIKVAG +QKS +V+K +N LVK+PELS Q+M+ EM KAGL+EE++ D M Sbjct: 9 FGKK-TPDELVKKWRQEIRAQQRSIQKQITAIDNEEAKVKRSIKQVAKKGDVKN--CKMLAKELIRSQRHKNRLYTSKAQLNSIIMQLEHQLATIKVAGSLQKSGEVMKLVNQLVKLPELSQSMQQMSMEMTKAGLMEEMIGDTM 150
BLAST of NO20G01190 vs. NCBI_GenBank
Match: XP_023462623.1 (hypothetical protein RHIMIDRAFT_219124, partial [Rhizopus microsporus ATCC 52813] >ORE03510.1 hypothetical protein BCV72DRAFT_279178, partial [Rhizopus microsporus var. microsporus] >PHZ08915.1 hypothetical protein RHIMIDRAFT_219124, partial [Rhizopus microsporus ATCC 52813]) HSP 1 Score: 105.9 bits (263), Expect = 1.600e-19 Identity = 61/145 (42.07%), Postives = 91/145 (62.76%), Query Frame = 0 Query: 4 FGKKLDPVEEAKKWKRNIGREVRXXXXXXXXXXXXXXXXXXEIKKLAKEGDSRRGALTILAKDLVRSRKTREKMVGGKAMLTSVQMQIQMQISTIKVAGCMQKSADVLKSLNALVKIPELSHVCQEMAREMEKAGLVEELVSDAM 149 FGKK P E KKW++ I + R IK++AK+GD + +LAK+L+RS++ + ++ KA L S+ MQ++ Q++TIKVAG +QKS +V+K +N LVK+PELS Q+M+ EM KAGL+EE++ D M Sbjct: 9 FGKK-TPDELVKKWRQEIRAQQRSIQKQITAIDNEEAKVKRSIKQVAKKGDVKN--CKMLAKELIRSQRHKNRLYTSKAQLNSIIMQLEHQLATIKVAGSLQKSGEVMKLVNQLVKLPELSQSMQQMSMEMTKAGLMEEMIGDTM 150
BLAST of NO20G01190 vs. NCBI_GenBank
Match: ORE13520.1 (Snf7-domain-containing protein [Rhizopus microsporus]) HSP 1 Score: 105.9 bits (263), Expect = 1.600e-19 Identity = 61/145 (42.07%), Postives = 91/145 (62.76%), Query Frame = 0 Query: 4 FGKKLDPVEEAKKWKRNIGREVRXXXXXXXXXXXXXXXXXXEIKKLAKEGDSRRGALTILAKDLVRSRKTREKMVGGKAMLTSVQMQIQMQISTIKVAGCMQKSADVLKSLNALVKIPELSHVCQEMAREMEKAGLVEELVSDAM 149 FGKK P E KKW++ I + R IK++AK+GD + +LAK+L+RS++ + ++ KA L S+ MQ++ Q++TIKVAG +QKS +V+K +N LVK+PELS Q+M+ EM KAGL+EE++ D M Sbjct: 9 FGKK-TPDELVKKWRQEIRAQQRSIQKQITAIDNEEAKVKRSIKQVAKKGDVKN--CKMLAKELIRSQRHKNRLYTSKAQLNSIIMQLEHQLATIKVAGSLQKSGEVMKLVNQLVKLPELSQSMQQMSMEMTKAGLMEEMIGDTM 150
BLAST of NO20G01190 vs. NCBI_GenBank
Match: ORY97424.1 (Snf7-domain-containing protein [Syncephalastrum racemosum]) HSP 1 Score: 105.5 bits (262), Expect = 2.100e-19 Identity = 58/145 (40.00%), Postives = 91/145 (62.76%), Query Frame = 0 Query: 4 FGKKLDPVEEAKKWKRNIGREVRXXXXXXXXXXXXXXXXXXEIKKLAKEGDSRRGALTILAKDLVRSRKTREKMVGGKAMLTSVQMQIQMQISTIKVAGCMQKSADVLKSLNALVKIPELSHVCQEMAREMEKAGLVEELVSDAM 149 FGKK P E KKW++ I + R IK++AK GD++ +LAK+L+RS+K + ++ KA L S+ MQ++ Q++TIK+AG +QKS +V+ +N LV++PE+S Q+M+ EM KAGL++E++SD M Sbjct: 12 FGKK-TPEELVKKWRQEIRGQQRQIQRQIQAIDIEEAKVKKSIKQVAKRGDTK--ICKMLAKELIRSQKHKNRLYTSKAQLNSIVMQLEQQLATIKIAGTLQKSGEVMSLVNRLVRLPEISQTMQQMSMEMTKAGLMDEMISDTM 153 The following BLAST results are available for this feature:
BLAST of NO20G01190 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO20G01190 ID=NO20G01190|Name=NO20G01190|organism=Nannochloropsis oceanica|type=gene|length=2090bpback to top protein sequence of NO20G01190.1 >NO20G01190.1-protein ID=NO20G01190.1-protein|Name=NO20G01190.1|organism=Nannochloropsis oceanica|type=polypeptide|length=225bpback to top Synonyms
Publications
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