NO20G00990, NO20G00990 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO20G00990 vs. NCBI_GenBank
Match: EWM22111.1 (horma domain-containing protein [Nannochloropsis gaditana]) HSP 1 Score: 359.4 bits (921), Expect = 2.400e-95 Identity = 274/532 (51.50%), Postives = 311/532 (58.46%), Query Frame = 0 Query: 1 MASTTLHRTVITTSAVSTSVTAVQSLALTKNLMRVGLSQIAYARSLFPEHCFTDKSYIDM-------KSDAGGIRNEEAHLLTNWLEQGVFDALTKRYLRAVVFAISVPV-------GGIEEEDGREEGPEKVVETYQWKVGYTEEGEVVLNASRIAKTKAELKGQAISLIRALLMFTQTLESLPSHRTLSLKLLYYDDRTPISYEPPFFQAAARGDCLSVEEEGCLKVKIGSVTSPQYALELKFVGVDPSVVLGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVQKSVLHPPSAIXXXXXXXXXXXXXXXXXXXXXXSFLPMRGKIVVGSVAYADLEAVRAHIVSF-YRPGSMISIHRVAAALGMSKEGVEAAFVRLAEEEGREGGREG--GWPFLENRSWGSGSRFVVR 516 MAST LHRT TT+ STSVTAVQSLALTKNLMRVGLSQIAYARSLFPEHCF +KSYIDM KS+ G +R+EEAHLLTNWLEQGVFDAL+KRYLRAVVFAIS+P +E G E EKV+ETYQWKVGYT++GEV LNASR+A+TKA+LK QAISLIRALLMFT TLESLP HRTLSLKLLYYD+RTP +YEPPFFQ AARGDCL+VE++G LKVKIG+V SPQYALELKFVGVD SVV XXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXX + S F KI+VGSV YA+LEAVR H++S +R GS IS+++ A AL +S+E +EAA LAEE RE G+ G +E R WG+G+RF+ R Sbjct: 1 MASTILHRT--TTAQTSTSVTAVQSLALTKNLMRVGLSQIAYARSLFPEHCFIEKSYIDMKIKHLQPKSENGNVRHEEAHLLTNWLEQGVFDALSKRYLRAVVFAISIPTPPTSLSCSAAIDERGAENAHEKVIETYQWKVGYTDDGEVTLNASRVARTKADLKAQAISLIRALLMFTHTLESLPCHRTLSLKLLYYDERTPPAYEPPFFQRAARGDCLAVEDKGALKVKIGNVVSPQYALELKFVGVDLSVVNRAEEAVEAEDGTESAGILLMRXXXXXXXXXXXXXXXXXXXXXXXXALSTPISGVSGARKRRNDVRGREREEVSEGDSSRDPSDXXXXXXXXXXXXKKPVGKQMDMEKEANKRTLGGIRTKMDGPRRREKGRGVTGAMNSLSLQDKVERTTRSTRRTGLLESNAQAKTEPDGECAGTIVDSPTTMSLFTQKHQKIIVGSVGYAELEAVREHVLSTDHRHGSWISVNKAATALSLSREQIEAALACLAEEGTRENGKGGRKQTAMVEGRVWGTGTRFLFR 530
BLAST of NO20G00990 vs. NCBI_GenBank
Match: XP_020148856.1 (meiosis-specific protein PAIR2 [Aegilops tauschii subsp. tauschii]) HSP 1 Score: 141.0 bits (354), Expect = 1.300e-29 Identity = 85/236 (36.02%), Postives = 128/236 (54.24%), Query Frame = 0 Query: 20 VTAVQSLALTKNLMRVGLSQIAYARSLFPEHCFTDKSY--IDMKSDAGGIRNEEAHLLTNWLEQGVFDALTKRYLRAVVFAISVPVGGIEEEDGREEGPEKVVETYQWKVGY--TEEGEVVLNASRIAK--------------TKAELKGQAISLIRALLMFTQTLESLPSHRTLSLKLLYYDDRTPISYEPPFFQAAARGDCLSVEEEGCLKVKIGSVTSPQYALELKFVGV-DP 237 +T SL LT+NL+R+ + I+Y R LFPE F DKS ++MK + E+ L +W+E+GV+DAL K+YL+ ++F I +EEGP ++E Y + Y T EV +N SR T +++ A +IR L+ +TL+ +P RT+ +KLLYYDD TP YEPPFF+ A + +++ + LK+++G+V S L LK V DP Sbjct: 13 ITEQDSLLLTRNLLRIAIYNISYIRGLFPEKYFNDKSVPALEMKIKKLMPMDAESRRLIDWMEKGVYDALQKKYLKTLLFCIC----------EKEEGP--MIEEYAFSFSYPNTNGEEVAMNMSRTGSKKNSATFKSNAAEVTPDQMRSSACKMIRTLVSLMRTLDQMPEERTILMKLLYYDDATPEDYEPPFFKGCAENEAVNIWNKNPLKMEVGNVNSKHLVLALKVKSVLDP 236
BLAST of NO20G00990 vs. NCBI_GenBank
Match: AFP73615.1 (asynapsis 1 [Hordeum vulgare subsp. vulgare]) HSP 1 Score: 139.4 bits (350), Expect = 3.800e-29 Identity = 84/236 (35.59%), Postives = 128/236 (54.24%), Query Frame = 0 Query: 20 VTAVQSLALTKNLMRVGLSQIAYARSLFPEHCFTDKSY--IDMKSDAGGIRNEEAHLLTNWLEQGVFDALTKRYLRAVVFAISVPVGGIEEEDGREEGPEKVVETYQWKVGY--TEEGEVVLNASRIAK--------------TKAELKGQAISLIRALLMFTQTLESLPSHRTLSLKLLYYDDRTPISYEPPFFQAAARGDCLSVEEEGCLKVKIGSVTSPQYALELKFVGV-DP 237 +T SL LT+NL+R+ + I+Y R LFPE F DKS ++MK + E+ L +W+E+GV+DAL K+YL+ ++F I +EEGP ++E Y + Y T EV +N SR T +++ A +IR L+ +TL+ +P RT+ +KLLYYD+ TP YEPPFF+ A + +++ + LK+++G+V S L LK V DP Sbjct: 10 ITEQDSLLLTRNLLRIAIYNISYIRGLFPEKYFNDKSVPALEMKIKKLMPMDPESRRLIDWMEKGVYDALQKKYLKTLLFCIC----------EKEEGP--MIEEYAFSFSYPNTNGEEVAMNMSRTGSKKNSTTFKSNSAEVTPDQMRSSACKMIRTLVSLMRTLDQMPEERTILMKLLYYDETTPEDYEPPFFKGCAENEAVNIWNKNPLKMEVGNVNSKHLVLALKVKSVLDP 233
BLAST of NO20G00990 vs. NCBI_GenBank
Match: XP_009776295.1 (PREDICTED: HORMA domain-containing protein 1-like isoform X2 [Nicotiana sylvestris]) HSP 1 Score: 139.4 bits (350), Expect = 3.800e-29 Identity = 80/235 (34.04%), Postives = 130/235 (55.32%), Query Frame = 0 Query: 10 VITTSAVSTSVTAVQSLALTKNLMRVGLSQIAYARSLFPEHCFTDKSY--IDMKSDAGGIRNEEAHLLTNWLEQGVFDALTKRYLRAVVFAISVPVGGIEEEDGREEGPEKVVETYQWKVGY--TEEGEVVLNASRIAKTKA---ELKGQAISLIRALLMFTQTLESLPSHRTLSLKLLYYDDRTPISYEPPFFQAAARGDCLSVEEEGCLKVKIGSVTSPQYALELKFVGV-DP 237 V+ + +T SL LT+NL+R+ L I Y R LFPE+ F+DKS ++MK + E+ L +W+E+GV+DAL K+YL+ ++F + + G ++E Y + Y ++ EV +N +RI K +++ A ++R L+ +TL+ +P RT+ +KLLYYDD TP YEPPFF++ + ++ + LK+++G V S + L LK V DP Sbjct: 2 VVAQKVKESEITEQDSLLLTRNLLRIALFNITYVRGLFPENYFSDKSVPALEMKIKKLMPMDAESRRLIDWMEKGVYDALQKKYLKTLLFCVCETIDG------------PMIEEYAFSFCYSNSDSQEVSMNINRIGTKKGGTYQMRSSACKMVRTLIQLMRTLDKMPEERTILMKLLYYDDVTPADYEPPFFKSCTEEEAVNPWAKSPLKMEVGDVNSKHFVLALKVKSVLDP 224
BLAST of NO20G00990 vs. NCBI_GenBank
Match: PKI78305.1 (hypothetical protein CRG98_001248 [Punica granatum]) HSP 1 Score: 139.0 bits (349), Expect = 5.000e-29 Identity = 81/233 (34.76%), Postives = 129/233 (55.36%), Query Frame = 0 Query: 10 VITTSAVSTSVTAVQSLALTKNLMRVGLSQIAYARSLFPEHCFTDKSY--IDMKSDAGGIRNEEAHLLTNWLEQGVFDALTKRYLRAVVFAISVPVGGIEEEDGREEGPEKVVETYQWKVGY--TEEGEVVLNASRIAKTK-AELKGQAISLIRALLMFTQTLESLPSHRTLSLKLLYYDDRTPISYEPPFFQAAARGDCLSVEEEGCLKVKIGSVTSPQYALELKFVGV-DP 237 V+ +T SL LT+NL+R+ + I+Y R LFPE F+DKS ++MK + E+ L +W+E+GV+DAL K+YL+ ++F + + EGP ++E Y + Y ++ E+ +N SR K + K A ++R L+ +TL+ +P RT+ +KLLYYDD TP YEPPFF+ + + + + LK+++G+V S + L LK V DP Sbjct: 2 VVAQKVKEAEITEQDSLLLTRNLLRIAIFNISYIRGLFPEKYFSDKSVPALEMKIKKLMPMDAESRRLIDWMEKGVYDALQKKYLKTLLFCVCEAL----------EGP--MIEEYSFSFSYSSSDRQEITMNVSRTGNKKGSAFKSSACKMVRTLVQLMRTLDKMPEERTILMKLLYYDDVTPADYEPPFFRGCSEEEAYNPWTKNPLKMEVGNVNSKHFVLALKVKSVLDP 222
BLAST of NO20G00990 vs. NCBI_GenBank
Match: EEC84851.1 (hypothetical protein OsI_31963 [Oryza sativa Indica Group]) HSP 1 Score: 138.7 bits (348), Expect = 6.600e-29 Identity = 86/246 (34.96%), Postives = 131/246 (53.25%), Query Frame = 0 Query: 10 VITTSAVSTSVTAVQSLALTKNLMRVGLSQIAYARSLFPEHCFTDKSY--IDMKSDAGGIRNEEAHLLTNWLEQGVFDALTKRYLRAVVFAISVPVGGIEEEDGREEGPEKVVETYQWKVGY--TEEGEVVLNASRIAK--------------TKAELKGQAISLIRALLMFTQTLESLPSHRTLSLKLLYYDDRTPISYEPPFFQAAARGDCLSVEEEGCLKVKIGSVTSPQYALELKFVGV-DP 237 V+ +T SL LT+NL+R+ + I+Y R LFPE+ F DKS ++MK + E+ L +W+E+GV+DAL K+YL+ ++F I +EEGP ++E Y + Y T EV +N SR T +++ A +IR L+ +TL+ +P RT+ +KLLYYDD TP YEPPFF+ A + +++ + LK+++G+V S L LK V DP Sbjct: 2 VMAQKTKEAEITEQDSLLLTRNLLRIAIYNISYIRGLFPENYFNDKSVPALEMKIKKLMPMDTESRRLIDWMEKGVYDALQKKYLKTLLFCIC----------EKEEGP--MIEEYAFSFSYPNTSGDEVAMNLSRTGSKKNSATFKSNAAEVTPDQMRSSACKMIRTLVSLMRTLDQMPEERTILMKLLYYDDVTPEDYEPPFFKCCADNEAINIWNKNPLKMEVGNVNSKHLVLALKVKSVLDP 235
BLAST of NO20G00990 vs. NCBI_GenBank
Match: XP_008670312.1 (meiosis-specific protein PAIR2 isoform X1 [Zea mays]) HSP 1 Score: 138.7 bits (348), Expect = 6.600e-29 Identity = 85/236 (36.02%), Postives = 128/236 (54.24%), Query Frame = 0 Query: 20 VTAVQSLALTKNLMRVGLSQIAYARSLFPEHCFTDKSY--IDMKSDAGGIRNEEAHLLTNWLEQGVFDALTKRYLRAVVFAISVPVGGIEEEDGREEGPEKVVETYQWKVGY--TEEGEVVLNASRIAKTKA--------------ELKGQAISLIRALLMFTQTLESLPSHRTLSLKLLYYDDRTPISYEPPFFQAAARGDCLSVEEEGCLKVKIGSVTSPQYALELKFVGV-DP 237 +T SL LT+NL+R+ + I+Y R LF E F+DKS ++MK + E+ L +W+E+GV+DAL K+YL+ ++F I +EEGP ++E Y + Y T EV +N SR K +++ A +IR L+ +TL+ +P RT+ +KLLYYDD TP YEPPFF+ A + +S+ + LK+++G+V S L LK V DP Sbjct: 10 ITEQDSLLLTRNLLRIAIYNISYIRGLFHEKYFSDKSVPALEMKIKKLMPMDAESRRLIDWMEKGVYDALQKKYLKTLLFCIC----------EKEEGP--MIEEYAFSFSYPNTSTEEVAMNMSRTGSKKGSTTFTSNASEVTPDQMRSSACKMIRTLVSLMRTLDPMPEERTILMKLLYYDDVTPEDYEPPFFKCCADNEAISIWNKNPLKMEVGNVNSKHLVLALKVKSVLDP 233
BLAST of NO20G00990 vs. NCBI_GenBank
Match: XP_008670313.1 (meiosis-specific protein PAIR2 isoform X2 [Zea mays]) HSP 1 Score: 138.7 bits (348), Expect = 6.600e-29 Identity = 85/236 (36.02%), Postives = 128/236 (54.24%), Query Frame = 0 Query: 20 VTAVQSLALTKNLMRVGLSQIAYARSLFPEHCFTDKSY--IDMKSDAGGIRNEEAHLLTNWLEQGVFDALTKRYLRAVVFAISVPVGGIEEEDGREEGPEKVVETYQWKVGY--TEEGEVVLNASRIAKTKA--------------ELKGQAISLIRALLMFTQTLESLPSHRTLSLKLLYYDDRTPISYEPPFFQAAARGDCLSVEEEGCLKVKIGSVTSPQYALELKFVGV-DP 237 +T SL LT+NL+R+ + I+Y R LF E F+DKS ++MK + E+ L +W+E+GV+DAL K+YL+ ++F I +EEGP ++E Y + Y T EV +N SR K +++ A +IR L+ +TL+ +P RT+ +KLLYYDD TP YEPPFF+ A + +S+ + LK+++G+V S L LK V DP Sbjct: 10 ITEQDSLLLTRNLLRIAIYNISYIRGLFHEKYFSDKSVPALEMKIKKLMPMDAESRRLIDWMEKGVYDALQKKYLKTLLFCIC----------EKEEGP--MIEEYAFSFSYPNTSTEEVAMNMSRTGSKKGSTTFTSNASEVTPDQMRSSACKMIRTLVSLMRTLDPMPEERTILMKLLYYDDVTPEDYEPPFFKCCADNEAISIWNKNPLKMEVGNVNSKHLVLALKVKSVLDP 233
BLAST of NO20G00990 vs. NCBI_GenBank
Match: XP_015612272.1 (PREDICTED: HORMA domain-containing protein 1 isoform X1 [Oryza sativa Japonica Group] >Q76CY8.1 RecName: Full=Meiosis-specific protein PAIR2; AltName: Full=OsASY1; AltName: Full=Protein HOMOLOGOUS PAIRING ABERRATION IN RICE MEIOSIS 2 >BAD00095.1 essential protein for meiotic synapsis [Oryza sativa Japonica Group] >BAT08867.1 Os09g0506800 [Oryza sativa Japonica Group]) HSP 1 Score: 137.9 bits (346), Expect = 1.100e-28 Identity = 86/246 (34.96%), Postives = 130/246 (52.85%), Query Frame = 0 Query: 10 VITTSAVSTSVTAVQSLALTKNLMRVGLSQIAYARSLFPEHCFTDKSY--IDMKSDAGGIRNEEAHLLTNWLEQGVFDALTKRYLRAVVFAISVPVGGIEEEDGREEGPEKVVETYQWKVGY--TEEGEVVLNASRIAK--------------TKAELKGQAISLIRALLMFTQTLESLPSHRTLSLKLLYYDDRTPISYEPPFFQAAARGDCLSVEEEGCLKVKIGSVTSPQYALELKFVGV-DP 237 V+ +T SL LT+NL+R+ + I+Y R LFPE F DKS ++MK + E+ L +W+E+GV+DAL K+YL+ ++F I +EEGP ++E Y + Y T EV +N SR T +++ A +IR L+ +TL+ +P RT+ +KLLYYDD TP YEPPFF+ A + +++ + LK+++G+V S L LK V DP Sbjct: 2 VMAQKTKEAEITEQDSLLLTRNLLRIAIYNISYIRGLFPEKYFNDKSVPALEMKIKKLMPMDTESRRLIDWMEKGVYDALQKKYLKTLLFCIC----------EKEEGP--MIEEYAFSFSYPNTSGDEVAMNLSRTGSKKNSATFKSNAAEVTPDQMRSSACKMIRTLVSLMRTLDQMPEERTILMKLLYYDDVTPEDYEPPFFKCCADNEAINIWNKNPLKMEVGNVNSKHLVLALKVKSVLDP 235
BLAST of NO20G00990 vs. NCBI_GenBank
Match: XP_015612273.1 (PREDICTED: HORMA domain-containing protein 1 isoform X2 [Oryza sativa Japonica Group] >BAF25524.1 Os09g0506800 [Oryza sativa Japonica Group] >BAG88972.1 unnamed protein product [Oryza sativa Japonica Group] >BAT08868.1 Os09g0506800 [Oryza sativa Japonica Group]) HSP 1 Score: 137.9 bits (346), Expect = 1.100e-28 Identity = 86/246 (34.96%), Postives = 130/246 (52.85%), Query Frame = 0 Query: 10 VITTSAVSTSVTAVQSLALTKNLMRVGLSQIAYARSLFPEHCFTDKSY--IDMKSDAGGIRNEEAHLLTNWLEQGVFDALTKRYLRAVVFAISVPVGGIEEEDGREEGPEKVVETYQWKVGY--TEEGEVVLNASRIAK--------------TKAELKGQAISLIRALLMFTQTLESLPSHRTLSLKLLYYDDRTPISYEPPFFQAAARGDCLSVEEEGCLKVKIGSVTSPQYALELKFVGV-DP 237 V+ +T SL LT+NL+R+ + I+Y R LFPE F DKS ++MK + E+ L +W+E+GV+DAL K+YL+ ++F I +EEGP ++E Y + Y T EV +N SR T +++ A +IR L+ +TL+ +P RT+ +KLLYYDD TP YEPPFF+ A + +++ + LK+++G+V S L LK V DP Sbjct: 2 VMAQKTKEAEITEQDSLLLTRNLLRIAIYNISYIRGLFPEKYFNDKSVPALEMKIKKLMPMDTESRRLIDWMEKGVYDALQKKYLKTLLFCIC----------EKEEGP--MIEEYAFSFSYPNTSGDEVAMNLSRTGSKKNSATFKSNAAEVTPDQMRSSACKMIRTLVSLMRTLDQMPEERTILMKLLYYDDVTPEDYEPPFFKCCADNEAINIWNKNPLKMEVGNVNSKHLVLALKVKSVLDP 235 The following BLAST results are available for this feature:
BLAST of NO20G00990 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO20G00990 ID=NO20G00990|Name=NO20G00990|organism=Nannochloropsis oceanica|type=gene|length=2603bpback to top protein sequence of NO20G00990.1 >NO20G00990.1-protein ID=NO20G00990.1-protein|Name=NO20G00990.1|organism=Nannochloropsis oceanica|type=polypeptide|length=646bpback to top Synonyms
Publications
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