NO20G00810, NO20G00810 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO20G00810 vs. NCBI_GenBank
Match: EWM22147.1 (protein tssc1 [Nannochloropsis gaditana]) HSP 1 Score: 185.3 bits (469), Expect = 1.100e-43 Identity = 83/109 (76.15%), Postives = 97/109 (88.99%), Query Frame = 0 Query: 4 GPVKQLAGHTHWVTTVKYNPCHDQLLLSGGTDSMVNLWRVSSISSAPLLDLEDGHDAPDLRVKKFEDHEESVYSVAWSSQDPFVFSSLSYDGRVAINAVPPSEKYKILL 113 GPVK+LAGH HWV TVKYNPCHDQLLLS GTD++VNLWR+SSISSAPL + E+G +APD+RV +DHEESVY+V WS+ DPF+F+SLSYDGRV +NAVPPSEKYKILL Sbjct: 321 GPVKRLAGHAHWVWTVKYNPCHDQLLLSAGTDNLVNLWRISSISSAPLWEPEEGPEAPDVRVLAIQDHEESVYAVDWSACDPFLFASLSYDGRVVVNAVPPSEKYKILL 429
BLAST of NO20G00810 vs. NCBI_GenBank
Match: XP_008607164.1 (hypothetical protein SDRG_03311 [Saprolegnia diclina VS20] >EQC39103.1 hypothetical protein SDRG_03311 [Saprolegnia diclina VS20]) HSP 1 Score: 145.6 bits (366), Expect = 9.400e-32 Identity = 67/109 (61.47%), Postives = 86/109 (78.90%), Query Frame = 0 Query: 9 LAGHTHWVTTVKYNPCHDQLLLSGGTDSMVNLWRVSSISSAPLLDLED-----GHDAPDLRVKKFEDHEESVYSVAWSSQDPFVFSSLSYDGRVAINAVPPSEKYKILL 113 L+GH+HWV VKYN HDQL+LS +DS+VNLWRVSSISSAPLL+++D G D D R+K +E+HE+SVYSVAW S D ++F+S+SY GRV +N VP +EKY+ILL Sbjct: 255 LSGHSHWVWCVKYNRFHDQLVLSSSSDSLVNLWRVSSISSAPLLEMDDDDSEQGIDVGDARIKSYEEHEDSVYSVAWGSADSWLFASVSYSGRVVLNQVPSTEKYRILL 363
BLAST of NO20G00810 vs. NCBI_GenBank
Match: CBJ48442.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 143.3 bits (360), Expect = 4.700e-31 Identity = 71/135 (52.59%), Postives = 89/135 (65.93%), Query Frame = 0 Query: 3 HGPVKQLAGHTHWVTTVKYNPCHDQLLLSGGTDSMVNLWRVSSISSAPLLDLEDGH-------------------------DAPDLRVKKFEDHEESVYSVAWSSQDPFVFSSLSYDGRVAINAVPPSEKYKILL 113 + PVK + GH HWV TVKYN HDQLL+SG +D MV+LWRVSS+SSAPLL+ ED +A D+RV+ F++HEESVYS+AWS+ D +V +SLSYDG V +N VP +EKYKILL Sbjct: 294 NAPVKTIVGHDHWVNTVKYNRFHDQLLVSGSSDCMVHLWRVSSVSSAPLLEPEDDDAGGLDXXXXXXXXXXXXXXXXXXXGEAADIRVRTFDEHEESVYSLAWSASDAWVMASLSYDGLVVLNHVPSTEKYKILL 428
BLAST of NO20G00810 vs. NCBI_GenBank
Match: OQR96716.1 (hypothetical protein ACHHYP_13756 [Achlya hypogyna]) HSP 1 Score: 136.7 bits (343), Expect = 4.400e-29 Identity = 67/123 (54.47%), Postives = 86/123 (69.92%), Query Frame = 0 Query: 9 LAGHTHWVTT--------------VKYNPCHDQLLLSGGTDSMVNLWRVSSISSAPLLDLED-----GHDAPDLRVKKFEDHEESVYSVAWSSQDPFVFSSLSYDGRVAINAVPPSEKYKILL 113 LAGH+HW T VKYN HDQL+LS +DS+VNLWRVSSISSAPLL+++D G D D ++K +E+HE+SVYSVAW S D ++F+S+SY GRV +N VP +EKY+ILL Sbjct: 253 LAGHSHWYTASRESCLDRLHRVWCVKYNRFHDQLVLSSSSDSVVNLWRVSSISSAPLLEMDDSESEAGVDVGDAKIKSYEEHEDSVYSVAWGSADSWLFASVSYSGRVVLNQVPSTEKYRILL 375
BLAST of NO20G00810 vs. NCBI_GenBank
Match: XP_009844703.1 (hypothetical protein H257_17567 [Aphanomyces astaci] >ETV65840.1 hypothetical protein H257_17567 [Aphanomyces astaci]) HSP 1 Score: 132.5 bits (332), Expect = 8.200e-28 Identity = 66/108 (61.11%), Postives = 79/108 (73.15%), Query Frame = 0 Query: 9 LAGHTHWVTTVKYNPCHDQLLLSGGTDSMVNLWRVSSISSAPLLDLE---DGHDAPDLRVKKFE-DHEESVYSVAWSSQDPFVFSSLSYDGRVAINAVPPSEKYKILL 113 L H+HWV VKYN HDQL+LS +DS VNLWRVSSISSAPLLD G D D ++ + DHE+SVY+VAW SQD +V+ SLSYDGRV +N VP +EKY+ILL Sbjct: 269 LPSHSHWVWCVKYNRFHDQLVLSSSSDSSVNLWRVSSISSAPLLDESTDAGGIDIGDAKISTHDGDHEDSVYAVAWGSQDSWVYVSLSYDGRVVLNTVPSTEKYRILL 376
BLAST of NO20G00810 vs. NCBI_GenBank
Match: XP_009033968.1 (hypothetical protein AURANDRAFT_20923, partial [Aureococcus anophagefferens] >EGB11620.1 hypothetical protein AURANDRAFT_20923, partial [Aureococcus anophagefferens]) HSP 1 Score: 132.1 bits (331), Expect = 1.100e-27 Identity = 68/127 (53.54%), Postives = 87/127 (68.50%), Query Frame = 0 Query: 5 PVKQLAGHTHWVTTVKYNPCHDQLLLSGGTDSMVNLWRVSSISSAPLLDLE------DG-------------HDAPDLRVKKFEDHEESVYSVAWSSQDPFVFSSLSYDGRVAINAVPPSEKYKILL 113 P+K L GH W ++YN HDQLL SGG+D +VNLWRVSSISSAPLL+L+ DG DAPD++VK ++ H+++V +VAWSS D +VF+SLS+DGRV +N VP EKYKILL Sbjct: 83 PLKILRGHDGWCGALEYNKYHDQLLASGGSDKLVNLWRVSSISSAPLLELDLDDAKGDGASSAVTSSAGTAAPDAPDVKVKDYDLHDDAVVAVAWSSCDAWVFASLSFDGRVLLNHVPSPEKYKILL 209
BLAST of NO20G00810 vs. NCBI_GenBank
Match: CCA25586.1 (conserved hypothetical protein [Albugo laibachii Nc14]) HSP 1 Score: 132.1 bits (331), Expect = 1.100e-27 Identity = 62/113 (54.87%), Postives = 80/113 (70.80%), Query Frame = 0 Query: 9 LAGHTHWVTTVKYNPCHDQLLLSGGTDSMVNLWRVSSISSAPLLDLED---------GHDAPDLRVKKFEDHEESVYSVAWSSQDPFVFSSLSYDGRVAINAVPPSEKYKILL 113 L+ H+HWV VKYN CHDQLLL+ +D+ LWR+ S+SSAPL+DLE+ G D +V ++EDH ESVYSV W++ D + F+SLSYDG + +NAVP SEKYKILL Sbjct: 260 LSAHSHWVLCVKYNRCHDQLLLTSSSDASYALWRIPSVSSAPLIDLEEQDIMSESASGAYVADTKVNQYEDHCESVYSVVWAASDSWRFASLSYDGSLTMNAVPSSEKYKILL 372
BLAST of NO20G00810 vs. NCBI_GenBank
Match: XP_002176819.1 (predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1] >EEC51282.1 predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 122.5 bits (306), Expect = 8.500e-25 Identity = 55/108 (50.93%), Postives = 77/108 (71.30%), Query Frame = 0 Query: 11 GHTHWVTTVKYNPCHDQLLLSGGTDSMVNLWRVSSISSAPLLDLEDGHD------APDLRVKKFEDHEESVYSVAWSSQDPFVFSSLSYDGRVAINAVPPSEKYKILL 113 GH+HWV+ +KYNP HDQL+L+ GTDS+ NLWR+S+ISSAPLL + D D A ++RV + E H E+VY +W + D ++++ + YDG+ +N VP EKYKILL Sbjct: 84 GHSHWVSQIKYNPFHDQLVLTTGTDSISNLWRISTISSAPLLTMHDDDDKLSETSAANVRVSRHE-HSEAVYGASWGAADAWIYACVGYDGKFVLNHVPSKEKYKILL 190
BLAST of NO20G00810 vs. NCBI_GenBank
Match: GBG32745.1 (Nuclear distribution protein PAC1-1 [Aurantiochytrium sp. FCC1311]) HSP 1 Score: 121.7 bits (304), Expect = 1.500e-24 Identity = 64/141 (45.39%), Postives = 82/141 (58.16%), Query Frame = 0 Query: 5 PVKQLAGHTHWVTTVKYNPCHDQLLLSGGTDSMVNLWRVSSISSAPLLDLE---------------------------------DGHDAPDLRVKKFEDHEESVYSVAWSSQDPFVFSSLSYDGRVAINAVPPSEKYKILL 113 P+K + H HWV V+YN HDQL+LS GTDS V+LWR+SSISSAPLL L+ + D VK +EDH +SVYSVAWS+ + +VF+SLS DG++ +N VP +EKYKILL Sbjct: 293 PLKVILAHDHWVGAVRYNRFHDQLVLSAGTDSHVSLWRLSSISSAPLLGLDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSETADGLVKSYEDHADSVYSVAWSAAEAWVFASLSIDGKLVVNHVPSAEKYKILL 433
BLAST of NO20G00810 vs. NCBI_GenBank
Match: OQV18668.1 (Protein TSSC1 [Hypsibius dujardini]) HSP 1 Score: 120.9 bits (302), Expect = 2.500e-24 Identity = 58/118 (49.15%), Postives = 80/118 (67.80%), Query Frame = 0 Query: 4 GPVKQLAGHTHWVTTVKYNPCHDQLLLSGGTDSMVNLWRVSSISSAPLL---------DLEDGHDAPDLRVKKFEDHEESVYSVAWSSQDPFVFSSLSYDGRVAINAVPPSEKYKILL 113 GP++ LA H+HWV VKYNP HDQLLL+ +DS V L ++S+SS P+ +L+ + D + +E+HE+SVY++ WSS DP+ F+SLSYDGR+ IN VP S KY+ILL Sbjct: 265 GPLRVLADHSHWVWCVKYNPFHDQLLLTSSSDSHVILTSIASLSSEPITRDAEDEPSSELDSKENLVDGIINTYEEHEDSVYALDWSSADPWTFASLSYDGRLVINRVPRSVKYRILL 382 The following BLAST results are available for this feature:
BLAST of NO20G00810 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO20G00810 ID=NO20G00810|Name=NO20G00810|organism=Nannochloropsis oceanica|type=gene|length=339bpback to top protein sequence of NO20G00810.1 >NO20G00810.1-protein ID=NO20G00810.1-protein|Name=NO20G00810.1|organism=Nannochloropsis oceanica|type=polypeptide|length=113bpback to top Synonyms
Publications
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