NO20G00800, NO20G00800 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO20G00800 vs. NCBI_GenBank
Match: EWM22149.1 (membrane-associated 30 kda protein [Nannochloropsis gaditana]) HSP 1 Score: 423.7 bits (1088), Expect = 6.200e-115 Identity = 236/289 (81.66%), Postives = 261/289 (90.31%), Query Frame = 0 Query: 106 AFMPHSTSTLFAPSSMSKLPTATTTRSSRTRTHAVQMNLADRFFRVVKANINSVIQNLEDPEKILEQAVEDMQRDLIKIRQSYAEVSATQKRMERQKEQADNLSNEWYKRAQLALSKGDEELAREALGRRQQQVEVATSLGEQMAVQGSAIDKLFMSMQQLEAKITEAKAKKDQMIARARTAKTSQKVNDMLSSVTGSTSMDAFDRMNEKVEMLESKAEIAGQLAGVSDSSLEGKFKLLGDGDALDEELKKMKGMLGQGEKKAAGFLPAGEAAAEVDLELEALRKDMGK 395 AF P T F P+ SK PTA T R RTRTHAVQMNLADRFFRVVKAN+NSV+QNLEDPEKILEQAVEDMQ+DLIKIRQSYAEVSATQKRMERQKEQA+NLS+EWYKRAQLALSKGDEELAREAL RRQQQVEV +SLGEQM +Q AID+LF SMQQLEAKI+EAK+KKDQMIARARTAKTS+KVNDMLSSV+G++SMDAF+RM EKVEMLESKAE+AGQLAGVSDSSLEGKFKLLG+ A+D+EL KMKGM+GQGE+K+AGFLP G A AEVD ELEALRK+MG+ Sbjct: 27 AFRP----TSFLPALHSKFPTA-TPRPLRTRTHAVQMNLADRFFRVVKANLNSVLQNLEDPEKILEQAVEDMQKDLIKIRQSYAEVSATQKRMERQKEQAENLSSEWYKRAQLALSKGDEELAREALSRRQQQVEVVSSLGEQMTIQAGAIDRLFNSMQQLEAKISEAKSKKDQMIARARTAKTSEKVNDMLSSVSGTSSMDAFERMKEKVEMLESKAEVAGQLAGVSDSSLEGKFKLLGESSAVDDELSKMKGMIGQGERKSAGFLPPGMAEAEVDSELEALRKEMGQ 310
BLAST of NO20G00800 vs. NCBI_GenBank
Match: CBJ49196.1 (Probable membrane-associated 30 kDa protein, chloroplast precursor [Ectocarpus siliculosus]) HSP 1 Score: 294.3 bits (752), Expect = 5.700e-76 Identity = 168/275 (61.09%), Postives = 215/275 (78.18%), Query Frame = 0 Query: 119 SSMSKLPTATTTRSSRTRTHAVQMNLADRFFRVVKANINSVIQNLEDPEKILEQAVEDMQRDLIKIRQSYAEVSATQKRMERQKEQADNLSNEWYKRAQLALSKGDEELAREALGRRQQQVEVATSLGEQMAVQGSAIDKLFMSMQQLEAKITEAKAKKDQMIARARTAKTSQKVNDMLSSVTGSTSMDAFDRMNEKVEMLESKAEIAGQLAGVSDSSLEGKFKLLGDGDALDEELKKMKGMLGQGEKKAAGFLPAGEAAAEVDLELEALRKDMG 394 S+ S + + + R+S + A+QMNLADRF RV KAN+N+++Q EDPEKILEQAVEDMQ+DL+KIRQSYAEVSATQKRM+RQK++AD L+ WY RAQLAL GDE LAREAL RRQQQ++ + S+G QM QG A+DKL SMQQLEAKITEAK +K+ +IARARTAKT+ +VNDML S+TG+TSMDAFDRM EKVE LE+ AEIAG+L+G + SLEG+FK L +A+D+EL +MKG+L +K LP+ A V+ EL+ ++++MG Sbjct: 108 SAQSHVRRSPSWRTSGGSSTALQMNLADRFLRVAKANLNNILQTWEDPEKILEQAVEDMQKDLVKIRQSYAEVSATQKRMDRQKQEADRLAANWYDRAQLALQNGDENLAREALARRQQQLDTSGSMGMQMDAQGQALDKLRDSMQQLEAKITEAKGQKETLIARARTAKTTTQVNDMLGSITGTTSMDAFDRMTEKVENLEANAEIAGELSGATSVSLEGQFKALEGNNAIDDELARMKGVL-PSKKGPTPQLPSSSPA--VESELDQMKREMG 379
BLAST of NO20G00800 vs. NCBI_GenBank
Match: XP_002179417.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC49240.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 271.6 bits (693), Expect = 4.000e-69 Identity = 169/302 (55.96%), Postives = 214/302 (70.86%), Query Frame = 0 Query: 106 AFMP--HSTSTLFAPSSMSKLPTATTTRSSRTRTHAVQMNLADRFFRVVKANINSVIQNLEDPEKILEQAVEDMQRDLIKIRQSYAEVSATQKRMERQKEQADNLSNEWYKRAQLALSKGDEELAREALGRRQQQVEVATSLGEQMAVQGSAIDKLFMSMQQLEAKITEAKAKKDQMIARARTAKTSQKVNDMLSSVTGSTSMDAFDRMNEKVEMLESKAEI--------AGQLAGVSDSSLEGKFKLLGDGDALDEELKKMKGMLG----QGEKKAAGFLPAGEAAAEVDLELEALRKDMG 394 AF P S S APS LP A +T SS + MNL DRF RV K+N+N+++QNLEDPEKI+ QAVEDMQ DL+K+RQSYAEV+ATQ+R+ +QKEQA+ +SN+WYKRAQLAL G+EELAREAL RRQQ + A++L +Q+ +Q ++IDKL+ MQ LE KI E+K+KKDQM+ARARTA+++QKVNDML VTG TSMDAF RM EKVE LE+ A++ A L G + SSLE +FK L ++D+ELKKMKG+LG G+KK AG A VD EL ++KD G Sbjct: 25 AFAPVHRSQSAFLAPS--IPLPRAASTSSS-----TLHMNLFDRFQRVAKSNLNNILQNLEDPEKIMNQAVEDMQADLVKVRQSYAEVTATQRRLLKQKEQAEAVSNDWYKRAQLALQAGNEELAREALSRRQQTADEASNLQQQIDLQAASIDKLYEGMQVLEKKILESKSKKDQMVARARTAQSTQKVNDMLGGVTGKTSMDAFSRMEEKVEALEAAADVSAEMGALGANALPGSAASSLEQQFKALESSSSVDDELKKMKGLLGGAKDSGDKKETSGSSAG-ADPAVDDELAKMKKDAG 318
BLAST of NO20G00800 vs. NCBI_GenBank
Match: EJK65858.1 (hypothetical protein THAOC_13240 [Thalassiosira oceanica]) HSP 1 Score: 249.2 bits (635), Expect = 2.100e-62 Identity = 148/286 (51.75%), Postives = 200/286 (69.93%), Query Frame = 0 Query: 119 SSMSKLPTATTTRS---SRTRTHAVQMNLADRFFRVVKANINSVIQNLEDPEKILEQAVEDMQRDLIKIRQSYAEVSATQKRMERQKEQADNLSNEWYKRAQLALSKGDEELAREALGRRQQQVEVATSLGEQMAVQGSAIDKLFMSMQQLEAKITEAKAKKDQMIARARTAKTSQKVNDMLSSVTGSTSMDAFDRMNEKVEMLESKAEIAGQ--------LAGVSDSSLEGKFKLLGDGDALDEELKKMKGMLGQGEKKAAGFLPAGEAAAEVDLELEALRKDMG 394 SS ++ P +++ R + + MNL DRF RV K+NIN+V+++LEDPEKI+ QAVEDMQ DL+K+RQSYAE++ATQ+R+ +QKEQAD L +WYKRAQLAL KG+E LA+EAL RRQQQ+E + L Q+ +Q A+DKL+ MQ LEAKI E+KAKK+QMIARARTA+++Q+VNDML +TG TSMDAF RM +KVE LE+ AE++ + L G S S+E +FK+L ++D+EL+ MK MLG + VD ELE L+++ G Sbjct: 25 SSFTRRPLLVESQNYALRRPSSTVLSMNLFDRFSRVAKSNINNVLKSLEDPEKIMNQAVEDMQTDLVKVRQSYAEITATQRRLMKQKEQADALGEDWYKRAQLALQKGEEGLAKEALSRRQQQMETSEGLQTQIDMQAQAVDKLYEGMQALEAKILESKAKKEQMIARARTAQSTQQVNDMLGGITGKTSMDAFQRMEDKVEALEAAAEVSAEMGSFDGKALPGSSAGSIESQFKMLEASSSVDKELEDMKKMLGSTSSASKN--------DGVDDELERLKREAG 302
BLAST of NO20G00800 vs. NCBI_GenBank
Match: XP_009033281.1 (hypothetical protein AURANDRAFT_19943 [Aureococcus anophagefferens] >EGB12209.1 hypothetical protein AURANDRAFT_19943 [Aureococcus anophagefferens]) HSP 1 Score: 245.0 bits (624), Expect = 4.000e-61 Identity = 137/214 (64.02%), Postives = 173/214 (80.84%), Query Frame = 0 Query: 142 MNLADRFFRVVKANINSVIQNLEDPEKILEQAVEDMQRDLIKIRQSYAEVSATQKRMERQKEQADNLSNEWYKRAQLALSKGDEELAREALGRRQQQVEVATSLGEQMAVQGSAIDKLFMSMQQLEAKITEAKAKKDQMIARARTAKTSQKVNDMLSSVTGSTSMDAFDRMNEKVEMLESKAEIAGQLA-GVSDSSLEGKFKLLGDGDALDEEL 355 MN+ DRF RV KAN N+++ DPEK+L QAV+D+Q+DL+ IRQSYAEV ATQKRM+RQK+QAD L++EWYKRAQLAL KGD+ELAREAL R+ QQ + + L EQ+AVQ ++ KL+ SM QLE+KI+EAK+ KDQ IARARTAKT+ KVNDMLS V GS+SMDAF+RM EKVEMLE++AE++GQL G S + +E KFK L G A+++EL Sbjct: 1 MNMFDRFKRVAKANANNLL-GKRDPEKVLNQAVDDLQKDLVTIRQSYAEVMATQKRMQRQKDQADQLADEWYKRAQLALEKGDDELAREALSRKTQQTDASAGLDEQIAVQTDSLAKLYDSMTQLESKISEAKSMKDQYIARARTAKTATKVNDMLSDVGGSSSMDAFERMKEKVEMLETQAEVSGQLQFGASTADMESKFKALEAGSAVEDEL 213
BLAST of NO20G00800 vs. NCBI_GenBank
Match: GAX23513.1 (phage shock protein A [Fistulifera solaris]) HSP 1 Score: 240.0 bits (611), Expect = 1.300e-59 Identity = 145/283 (51.24%), Postives = 198/283 (69.96%), Query Frame = 0 Query: 114 TLFAPSSMSKLPTATTTRSSRTRTHAVQMNLADRFFRVVKANINSVIQNLEDPEKILEQAVEDMQRDLIKIRQSYAEVSATQKRMERQKEQADNLSNEWYKRAQLALSKGDEELAREALGRRQQQVEVATSLGEQMAVQGSAIDKLFMSMQQLEAKITEAKAKKDQMIARARTAKTSQKVNDMLSSVTGSTSMDAFDRMNEKVEMLESKAEIAGQLAGV---SDSSLEGKFKLLGDGDALDEELKKMKGMLGQGEKKAAGFLPAGEAAAEVDLELEALRKDMG 394 T+ SS P+ + SS A+QMNL DRF RV K+N+N++++NLEDPEKI+ QAVEDMQ+DL+ +RQSYAEV+ATQ+R+ +QKEQ D ++ +WYKRAQLAL +E LA+EAL RRQQQ++ A SL Q+ Q S+IDKL+ MQ LE+ I +AK+KK+QM+ARARTA+++QKVNDML+ +TGSTSMDAF RM EKVE LE+ AEI+ +++ S SSLE +F K+KGML +++++ + A VD E E L+K+ G Sbjct: 18 TVVPHSSFVSRPSVSVPSSST----ALQMNLFDRFTRVAKSNLNNILKNLEDPEKIMTQAVEDMQKDLVSVRQSYAEVTATQRRLLKQKEQCDAVAEDWYKRAQLALKASNEGLAKEALTRRQQQLDEAASLQSQIDAQASSIDKLYEGMQTLESAILDAKSKKEQMVARARTAQSTQKVNDMLTGLTGSTSMDAFKRMEEKVEALEAAAEISSEMSKALPGSKSSLEDQFXXXXXXXXXXXXXNKLKGMLNPAKEESSSSSAKSDNKA-VDDEFEKLKKEAG 295
BLAST of NO20G00800 vs. NCBI_GenBank
Match: OEU19725.1 (PspA_IM30-domain-containing protein [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 238.0 bits (606), Expect = 4.900e-59 Identity = 137/244 (56.15%), Postives = 178/244 (72.95%), Query Frame = 0 Query: 126 TATTTRSSRTRTHAVQMNLADRFFRVVKANINSVIQNLEDPEKILEQAVEDMQRDLIKIRQSYAEVSATQKRMERQKEQADNLSNEWYKRAQLALSKGDEELAREALGRRQQQVEVATSLGEQMAVQGSAIDKLFMSMQQLEAKITEAKAKKDQMIARARTAKTSQKVNDMLSSVTGSTSMDAFDRMNEKVEMLESKAEIAGQ--------LAGVSDSSLEGKFKLLGDGDALDEELKKMKGML 362 T T SS HA NL DRF RV K+N+N++ LEDPEKI+EQA+E+MQ DL+KIRQSYAEV+ATQ+R+ +QKEQ + +S +WYKRAQLAL KG++ELA+EAL RRQ Q E A L Q+ Q A+DKL+ M+ LE +I+E+KA+KDQM+ARARTA+++QKVNDMLS VTG TSMDAF RM EKVE LE+ AE++ + L G + +E +F L D++D+EL KMKG+L Sbjct: 42 TRTAPSSSNVILHA---NLFDRFARVAKSNLNNLAGKLEDPEKIMEQALEEMQNDLVKIRQSYAEVTATQRRLMKQKEQCEAMSQDWYKRAQLALEKGNDELAKEALSRRQTQTEEANGLQSQLDGQADAMDKLYEGMKMLEKRISESKAQKDQMVARARTAQSTQKVNDMLSGVTGKTSMDAFTRMEEKVEQLEASAEVSAEMGSLGGNMLPGSDGAGIEAQFAALEASDSVDDELAKMKGLL 282
BLAST of NO20G00800 vs. NCBI_GenBank
Match: GAX13671.1 (phage shock protein A [Fistulifera solaris]) HSP 1 Score: 236.9 bits (603), Expect = 1.100e-58 Identity = 144/286 (50.35%), Postives = 199/286 (69.58%), Query Frame = 0 Query: 111 STSTLFAPSSMSKLPTATTTRSSRTRTHAVQMNLADRFFRVVKANINSVIQNLEDPEKILEQAVEDMQRDLIKIRQSYAEVSATQKRMERQKEQADNLSNEWYKRAQLALSKGDEELAREALGRRQQQVEVATSLGEQMAVQGSAIDKLFMSMQQLEAKITEAKAKKDQMIARARTAKTSQKVNDMLSSVTGSTSMDAFDRMNEKVEMLESKAEIAGQLAGV---SDSSLEGKFKLLGDGDALDEELKKMKGMLGQGEKKAAGFLPAGEAAAEVDLELEALRKDMG 394 S T+ +S + P+ + SS ++QMNL DRF RV K+N+N++++NLEDPEKI+ QAVEDMQ+DL+ +RQSYAEV+ATQ+R+ +QKEQ D ++ +WYKRAQLAL +E LA+EAL RRQQQ++ A SL Q+ Q S+IDKL+ MQ LE+ I +AK+KK+QM+ARARTA+++QKVNDML+ +TGSTSMDAF RM EKVE LE+ AEI+ +++ S SSLE +F K+KGML +++++ A VD E E L+K+ G Sbjct: 15 SAFTVVPHNSFASRPSVSIPSSST----SLQMNLFDRFTRVAKSNLNNILKNLEDPEKIMTQAVEDMQKDLVSVRQSYAEVTATQRRLLKQKEQCDAVAEDWYKRAQLALKASNEGLAKEALTRRQQQLDEAASLQAQIDAQASSIDKLYEGMQTLESAILDAKSKKEQMVARARTAQSTQKVNDMLTGLTGSTSMDAFKRMEEKVEALEAAAEISSEMSKALPGSKSSLEDQFXXXXXXXXXXXXXNKLKGMLNPAKEESSS-SSAKSDNKSVDDEFEKLKKEAG 295
BLAST of NO20G00800 vs. NCBI_GenBank
Match: CEL97660.1 (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 231.1 bits (588), Expect = 5.900e-57 Identity = 144/284 (50.70%), Postives = 194/284 (68.31%), Query Frame = 0 Query: 112 TSTLFAPSSMSKLPTATTTRSSRTRTHAVQM--NLADRFFRVVKANINSVIQNLEDPEKILEQAVEDMQRDLIKIRQSYAEVSATQKRMERQKEQADNLSNEWYKRAQLALSKGDEELAREALGRRQQQVEVATSLGEQMAVQGSAIDKLFMSMQQLEAKITEAKAKKDQMIARARTAKTSQKVNDMLSSV-TGSTSMDAFDRMNEKVEMLESKAEIAGQLAGVSDSSLEGKFKLLGDGDALDEELKKMKGMLGQGEKKAAGFLPAGEAAAEVDLELEALRKDM 393 ++ F P L TA R T M NL DRFFRVVK+N+ +VI EDPEK+LEQAV DM DL K+RQSYAE++ATQKR+ERQ+ A + + EW +RAQLA+ KG+E+LAREAL R+ + +L EQM +QG A+++L SM+ LE KI EA++KKDQ+IARARTAKT+Q+V DMLS + G TSMDAF+RM EKVE LESKAE++ Q++ +S ++E KFK L +G +D EL+K+K +G+ K+ A A+ EV+ EL ++ M Sbjct: 16 STVAFVPQPTFVLQTAQPIRPRLRSTQVTMMADNLVDRFFRVVKSNVGAVISKFEDPEKVLEQAVIDMNEDLRKVRQSYAEITATQKRVERQRNAAADQAAEWMRRAQLAVEKGEEDLAREALQRKVTLSDQVKTLEEQMRLQGEALEQLQASMRTLEMKINEARSKKDQLIARARTAKTAQQVTDMLSGMGLGKTSMDAFERMQEKVETLESKAEVSRQMS-LSSGTVEDKFKSLEEGSGVDAELQKLKASMGKTSKEPA---QLKFASPEVEAELAQIKNKM 295
BLAST of NO20G00800 vs. NCBI_GenBank
Match: XP_002287533.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED94976.1 predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 227.6 bits (579), Expect = 6.600e-56 Identity = 132/260 (50.77%), Postives = 183/260 (70.38%), Query Frame = 0 Query: 142 MNLADRFFRVVKANINSVIQNLEDPEKILEQAVEDMQRDLIKIRQSYAEVSATQKRMERQKEQADNLSNEWYKRAQLALSKGDEELAREALGRRQQQVEVATSLGEQMAVQGSAIDKLFMSMQQLEAKITEAKAKKDQMIARARTAKTSQKVNDMLSSVTGSTSMDAFDRMNEKVEMLESKAEIAGQLAGVSD--------SSLEGKFKLLGDGDALDEELKKMKGMLGQGEKKAAGFLPAGEAAAEVDLELEALRKDMG 394 MNL DRF RV K+NIN+V+++LEDPEKI+ QA+EDMQ DL+K+RQSYAE++ATQ+R+ +QKEQA+ L+ +WYKRAQLALSKG+E LA+EAL RRQQQVE L Q+ +Q +A+DKL+ MQ LEAKI E+K+KK+QM+ARARTA+++QKVNDML +T +RM AE++ ++ +S SSLE +FK+L G ++D+EL++MK MLG A +++ D ELE L+++ G Sbjct: 1 MNLFDRFTRVAKSNINNVLKSLEDPEKIMNQALEDMQTDLVKVRQSYAEITATQRRLMKQKEQAEALAEDWYKRAQLALSKGEEGLAKEALTRRQQQVETMEGLKLQIDMQATAVDKLYEGMQALEAKILESKSKKEQMVARARTAQSTQKVNDMLGGITXXXXXXXXNRMEXXXXXXXXAAEVSAEMGALSGNALPGSKASSLESQFKMLEAGSSVDKELEEMKKMLGSTSS-------ASKSSGGTDEELERLKREAG 253 The following BLAST results are available for this feature:
BLAST of NO20G00800 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO20G00800 ID=NO20G00800|Name=NO20G00800|organism=Nannochloropsis oceanica|type=gene|length=1185bpback to top protein sequence of NO20G00800.1 >NO20G00800.1-protein ID=NO20G00800.1-protein|Name=NO20G00800.1|organism=Nannochloropsis oceanica|type=polypeptide|length=395bpback to top Synonyms
Publications
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