NO20G00800, NO20G00800 (gene) Nannochloropsis oceanica

Overview
NameNO20G00800
Unique NameNO20G00800
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1185
Alignment locationchr20:273019..274203 +

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Properties
Property NameValue
DescriptionMembrane-associated 30 kDa protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr20genomechr20:273019..274203 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR007157PspA_IM30
Homology
BLAST of NO20G00800 vs. NCBI_GenBank
Match: EWM22149.1 (membrane-associated 30 kda protein [Nannochloropsis gaditana])

HSP 1 Score: 423.7 bits (1088), Expect = 6.200e-115
Identity = 236/289 (81.66%), Postives = 261/289 (90.31%), Query Frame = 0
Query:  106 AFMPHSTSTLFAPSSMSKLPTATTTRSSRTRTHAVQMNLADRFFRVVKANINSVIQNLEDPEKILEQAVEDMQRDLIKIRQSYAEVSATQKRMERQKEQADNLSNEWYKRAQLALSKGDEELAREALGRRQQQVEVATSLGEQMAVQGSAIDKLFMSMQQLEAKITEAKAKKDQMIARARTAKTSQKVNDMLSSVTGSTSMDAFDRMNEKVEMLESKAEIAGQLAGVSDSSLEGKFKLLGDGDALDEELKKMKGMLGQGEKKAAGFLPAGEAAAEVDLELEALRKDMGK 395
            AF P    T F P+  SK PTA T R  RTRTHAVQMNLADRFFRVVKAN+NSV+QNLEDPEKILEQAVEDMQ+DLIKIRQSYAEVSATQKRMERQKEQA+NLS+EWYKRAQLALSKGDEELAREAL RRQQQVEV +SLGEQM +Q  AID+LF SMQQLEAKI+EAK+KKDQMIARARTAKTS+KVNDMLSSV+G++SMDAF+RM EKVEMLESKAE+AGQLAGVSDSSLEGKFKLLG+  A+D+EL KMKGM+GQGE+K+AGFLP G A AEVD ELEALRK+MG+
Sbjct:   27 AFRP----TSFLPALHSKFPTA-TPRPLRTRTHAVQMNLADRFFRVVKANLNSVLQNLEDPEKILEQAVEDMQKDLIKIRQSYAEVSATQKRMERQKEQAENLSSEWYKRAQLALSKGDEELAREALSRRQQQVEVVSSLGEQMTIQAGAIDRLFNSMQQLEAKISEAKSKKDQMIARARTAKTSEKVNDMLSSVSGTSSMDAFERMKEKVEMLESKAEVAGQLAGVSDSSLEGKFKLLGESSAVDDELSKMKGMIGQGERKSAGFLPPGMAEAEVDSELEALRKEMGQ 310          
BLAST of NO20G00800 vs. NCBI_GenBank
Match: CBJ49196.1 (Probable membrane-associated 30 kDa protein, chloroplast precursor [Ectocarpus siliculosus])

HSP 1 Score: 294.3 bits (752), Expect = 5.700e-76
Identity = 168/275 (61.09%), Postives = 215/275 (78.18%), Query Frame = 0
Query:  119 SSMSKLPTATTTRSSRTRTHAVQMNLADRFFRVVKANINSVIQNLEDPEKILEQAVEDMQRDLIKIRQSYAEVSATQKRMERQKEQADNLSNEWYKRAQLALSKGDEELAREALGRRQQQVEVATSLGEQMAVQGSAIDKLFMSMQQLEAKITEAKAKKDQMIARARTAKTSQKVNDMLSSVTGSTSMDAFDRMNEKVEMLESKAEIAGQLAGVSDSSLEGKFKLLGDGDALDEELKKMKGMLGQGEKKAAGFLPAGEAAAEVDLELEALRKDMG 394
            S+ S +  + + R+S   + A+QMNLADRF RV KAN+N+++Q  EDPEKILEQAVEDMQ+DL+KIRQSYAEVSATQKRM+RQK++AD L+  WY RAQLAL  GDE LAREAL RRQQQ++ + S+G QM  QG A+DKL  SMQQLEAKITEAK +K+ +IARARTAKT+ +VNDML S+TG+TSMDAFDRM EKVE LE+ AEIAG+L+G +  SLEG+FK L   +A+D+EL +MKG+L   +K     LP+   A  V+ EL+ ++++MG
Sbjct:  108 SAQSHVRRSPSWRTSGGSSTALQMNLADRFLRVAKANLNNILQTWEDPEKILEQAVEDMQKDLVKIRQSYAEVSATQKRMDRQKQEADRLAANWYDRAQLALQNGDENLAREALARRQQQLDTSGSMGMQMDAQGQALDKLRDSMQQLEAKITEAKGQKETLIARARTAKTTTQVNDMLGSITGTTSMDAFDRMTEKVENLEANAEIAGELSGATSVSLEGQFKALEGNNAIDDELARMKGVL-PSKKGPTPQLPSSSPA--VESELDQMKREMG 379          
BLAST of NO20G00800 vs. NCBI_GenBank
Match: XP_002179417.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC49240.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 271.6 bits (693), Expect = 4.000e-69
Identity = 169/302 (55.96%), Postives = 214/302 (70.86%), Query Frame = 0
Query:  106 AFMP--HSTSTLFAPSSMSKLPTATTTRSSRTRTHAVQMNLADRFFRVVKANINSVIQNLEDPEKILEQAVEDMQRDLIKIRQSYAEVSATQKRMERQKEQADNLSNEWYKRAQLALSKGDEELAREALGRRQQQVEVATSLGEQMAVQGSAIDKLFMSMQQLEAKITEAKAKKDQMIARARTAKTSQKVNDMLSSVTGSTSMDAFDRMNEKVEMLESKAEI--------AGQLAGVSDSSLEGKFKLLGDGDALDEELKKMKGMLG----QGEKKAAGFLPAGEAAAEVDLELEALRKDMG 394
            AF P   S S   APS    LP A +T SS      + MNL DRF RV K+N+N+++QNLEDPEKI+ QAVEDMQ DL+K+RQSYAEV+ATQ+R+ +QKEQA+ +SN+WYKRAQLAL  G+EELAREAL RRQQ  + A++L +Q+ +Q ++IDKL+  MQ LE KI E+K+KKDQM+ARARTA+++QKVNDML  VTG TSMDAF RM EKVE LE+ A++        A  L G + SSLE +FK L    ++D+ELKKMKG+LG     G+KK      AG A   VD EL  ++KD G
Sbjct:   25 AFAPVHRSQSAFLAPS--IPLPRAASTSSS-----TLHMNLFDRFQRVAKSNLNNILQNLEDPEKIMNQAVEDMQADLVKVRQSYAEVTATQRRLLKQKEQAEAVSNDWYKRAQLALQAGNEELAREALSRRQQTADEASNLQQQIDLQAASIDKLYEGMQVLEKKILESKSKKDQMVARARTAQSTQKVNDMLGGVTGKTSMDAFSRMEEKVEALEAAADVSAEMGALGANALPGSAASSLEQQFKALESSSSVDDELKKMKGLLGGAKDSGDKKETSGSSAG-ADPAVDDELAKMKKDAG 318          
BLAST of NO20G00800 vs. NCBI_GenBank
Match: EJK65858.1 (hypothetical protein THAOC_13240 [Thalassiosira oceanica])

HSP 1 Score: 249.2 bits (635), Expect = 2.100e-62
Identity = 148/286 (51.75%), Postives = 200/286 (69.93%), Query Frame = 0
Query:  119 SSMSKLPTATTTRS---SRTRTHAVQMNLADRFFRVVKANINSVIQNLEDPEKILEQAVEDMQRDLIKIRQSYAEVSATQKRMERQKEQADNLSNEWYKRAQLALSKGDEELAREALGRRQQQVEVATSLGEQMAVQGSAIDKLFMSMQQLEAKITEAKAKKDQMIARARTAKTSQKVNDMLSSVTGSTSMDAFDRMNEKVEMLESKAEIAGQ--------LAGVSDSSLEGKFKLLGDGDALDEELKKMKGMLGQGEKKAAGFLPAGEAAAEVDLELEALRKDMG 394
            SS ++ P    +++    R  +  + MNL DRF RV K+NIN+V+++LEDPEKI+ QAVEDMQ DL+K+RQSYAE++ATQ+R+ +QKEQAD L  +WYKRAQLAL KG+E LA+EAL RRQQQ+E +  L  Q+ +Q  A+DKL+  MQ LEAKI E+KAKK+QMIARARTA+++Q+VNDML  +TG TSMDAF RM +KVE LE+ AE++ +        L G S  S+E +FK+L    ++D+EL+ MK MLG     +            VD ELE L+++ G
Sbjct:   25 SSFTRRPLLVESQNYALRRPSSTVLSMNLFDRFSRVAKSNINNVLKSLEDPEKIMNQAVEDMQTDLVKVRQSYAEITATQRRLMKQKEQADALGEDWYKRAQLALQKGEEGLAKEALSRRQQQMETSEGLQTQIDMQAQAVDKLYEGMQALEAKILESKAKKEQMIARARTAQSTQQVNDMLGGITGKTSMDAFQRMEDKVEALEAAAEVSAEMGSFDGKALPGSSAGSIESQFKMLEASSSVDKELEDMKKMLGSTSSASKN--------DGVDDELERLKREAG 302          
BLAST of NO20G00800 vs. NCBI_GenBank
Match: XP_009033281.1 (hypothetical protein AURANDRAFT_19943 [Aureococcus anophagefferens] >EGB12209.1 hypothetical protein AURANDRAFT_19943 [Aureococcus anophagefferens])

HSP 1 Score: 245.0 bits (624), Expect = 4.000e-61
Identity = 137/214 (64.02%), Postives = 173/214 (80.84%), Query Frame = 0
Query:  142 MNLADRFFRVVKANINSVIQNLEDPEKILEQAVEDMQRDLIKIRQSYAEVSATQKRMERQKEQADNLSNEWYKRAQLALSKGDEELAREALGRRQQQVEVATSLGEQMAVQGSAIDKLFMSMQQLEAKITEAKAKKDQMIARARTAKTSQKVNDMLSSVTGSTSMDAFDRMNEKVEMLESKAEIAGQLA-GVSDSSLEGKFKLLGDGDALDEEL 355
            MN+ DRF RV KAN N+++    DPEK+L QAV+D+Q+DL+ IRQSYAEV ATQKRM+RQK+QAD L++EWYKRAQLAL KGD+ELAREAL R+ QQ + +  L EQ+AVQ  ++ KL+ SM QLE+KI+EAK+ KDQ IARARTAKT+ KVNDMLS V GS+SMDAF+RM EKVEMLE++AE++GQL  G S + +E KFK L  G A+++EL
Sbjct:    1 MNMFDRFKRVAKANANNLL-GKRDPEKVLNQAVDDLQKDLVTIRQSYAEVMATQKRMQRQKDQADQLADEWYKRAQLALEKGDDELAREALSRKTQQTDASAGLDEQIAVQTDSLAKLYDSMTQLESKISEAKSMKDQYIARARTAKTATKVNDMLSDVGGSSSMDAFERMKEKVEMLETQAEVSGQLQFGASTADMESKFKALEAGSAVEDEL 213          
BLAST of NO20G00800 vs. NCBI_GenBank
Match: GAX23513.1 (phage shock protein A [Fistulifera solaris])

HSP 1 Score: 240.0 bits (611), Expect = 1.300e-59
Identity = 145/283 (51.24%), Postives = 198/283 (69.96%), Query Frame = 0
Query:  114 TLFAPSSMSKLPTATTTRSSRTRTHAVQMNLADRFFRVVKANINSVIQNLEDPEKILEQAVEDMQRDLIKIRQSYAEVSATQKRMERQKEQADNLSNEWYKRAQLALSKGDEELAREALGRRQQQVEVATSLGEQMAVQGSAIDKLFMSMQQLEAKITEAKAKKDQMIARARTAKTSQKVNDMLSSVTGSTSMDAFDRMNEKVEMLESKAEIAGQLAGV---SDSSLEGKFKLLGDGDALDEELKKMKGMLGQGEKKAAGFLPAGEAAAEVDLELEALRKDMG 394
            T+   SS    P+ +   SS     A+QMNL DRF RV K+N+N++++NLEDPEKI+ QAVEDMQ+DL+ +RQSYAEV+ATQ+R+ +QKEQ D ++ +WYKRAQLAL   +E LA+EAL RRQQQ++ A SL  Q+  Q S+IDKL+  MQ LE+ I +AK+KK+QM+ARARTA+++QKVNDML+ +TGSTSMDAF RM EKVE LE+ AEI+ +++     S SSLE +F              K+KGML   +++++      +  A VD E E L+K+ G
Sbjct:   18 TVVPHSSFVSRPSVSVPSSST----ALQMNLFDRFTRVAKSNLNNILKNLEDPEKIMTQAVEDMQKDLVSVRQSYAEVTATQRRLLKQKEQCDAVAEDWYKRAQLALKASNEGLAKEALTRRQQQLDEAASLQSQIDAQASSIDKLYEGMQTLESAILDAKSKKEQMVARARTAQSTQKVNDMLTGLTGSTSMDAFKRMEEKVEALEAAAEISSEMSKALPGSKSSLEDQFXXXXXXXXXXXXXNKLKGMLNPAKEESSSSSAKSDNKA-VDDEFEKLKKEAG 295          
BLAST of NO20G00800 vs. NCBI_GenBank
Match: OEU19725.1 (PspA_IM30-domain-containing protein [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 238.0 bits (606), Expect = 4.900e-59
Identity = 137/244 (56.15%), Postives = 178/244 (72.95%), Query Frame = 0
Query:  126 TATTTRSSRTRTHAVQMNLADRFFRVVKANINSVIQNLEDPEKILEQAVEDMQRDLIKIRQSYAEVSATQKRMERQKEQADNLSNEWYKRAQLALSKGDEELAREALGRRQQQVEVATSLGEQMAVQGSAIDKLFMSMQQLEAKITEAKAKKDQMIARARTAKTSQKVNDMLSSVTGSTSMDAFDRMNEKVEMLESKAEIAGQ--------LAGVSDSSLEGKFKLLGDGDALDEELKKMKGML 362
            T T   SS    HA   NL DRF RV K+N+N++   LEDPEKI+EQA+E+MQ DL+KIRQSYAEV+ATQ+R+ +QKEQ + +S +WYKRAQLAL KG++ELA+EAL RRQ Q E A  L  Q+  Q  A+DKL+  M+ LE +I+E+KA+KDQM+ARARTA+++QKVNDMLS VTG TSMDAF RM EKVE LE+ AE++ +        L G   + +E +F  L   D++D+EL KMKG+L
Sbjct:   42 TRTAPSSSNVILHA---NLFDRFARVAKSNLNNLAGKLEDPEKIMEQALEEMQNDLVKIRQSYAEVTATQRRLMKQKEQCEAMSQDWYKRAQLALEKGNDELAKEALSRRQTQTEEANGLQSQLDGQADAMDKLYEGMKMLEKRISESKAQKDQMVARARTAQSTQKVNDMLSGVTGKTSMDAFTRMEEKVEQLEASAEVSAEMGSLGGNMLPGSDGAGIEAQFAALEASDSVDDELAKMKGLL 282          
BLAST of NO20G00800 vs. NCBI_GenBank
Match: GAX13671.1 (phage shock protein A [Fistulifera solaris])

HSP 1 Score: 236.9 bits (603), Expect = 1.100e-58
Identity = 144/286 (50.35%), Postives = 199/286 (69.58%), Query Frame = 0
Query:  111 STSTLFAPSSMSKLPTATTTRSSRTRTHAVQMNLADRFFRVVKANINSVIQNLEDPEKILEQAVEDMQRDLIKIRQSYAEVSATQKRMERQKEQADNLSNEWYKRAQLALSKGDEELAREALGRRQQQVEVATSLGEQMAVQGSAIDKLFMSMQQLEAKITEAKAKKDQMIARARTAKTSQKVNDMLSSVTGSTSMDAFDRMNEKVEMLESKAEIAGQLAGV---SDSSLEGKFKLLGDGDALDEELKKMKGMLGQGEKKAAGFLPAGEAAAEVDLELEALRKDMG 394
            S  T+   +S +  P+ +   SS     ++QMNL DRF RV K+N+N++++NLEDPEKI+ QAVEDMQ+DL+ +RQSYAEV+ATQ+R+ +QKEQ D ++ +WYKRAQLAL   +E LA+EAL RRQQQ++ A SL  Q+  Q S+IDKL+  MQ LE+ I +AK+KK+QM+ARARTA+++QKVNDML+ +TGSTSMDAF RM EKVE LE+ AEI+ +++     S SSLE +F              K+KGML   +++++    A      VD E E L+K+ G
Sbjct:   15 SAFTVVPHNSFASRPSVSIPSSST----SLQMNLFDRFTRVAKSNLNNILKNLEDPEKIMTQAVEDMQKDLVSVRQSYAEVTATQRRLLKQKEQCDAVAEDWYKRAQLALKASNEGLAKEALTRRQQQLDEAASLQAQIDAQASSIDKLYEGMQTLESAILDAKSKKEQMVARARTAQSTQKVNDMLTGLTGSTSMDAFKRMEEKVEALEAAAEISSEMSKALPGSKSSLEDQFXXXXXXXXXXXXXNKLKGMLNPAKEESSS-SSAKSDNKSVDDEFEKLKKEAG 295          
BLAST of NO20G00800 vs. NCBI_GenBank
Match: CEL97660.1 (unnamed protein product [Vitrella brassicaformis CCMP3155])

HSP 1 Score: 231.1 bits (588), Expect = 5.900e-57
Identity = 144/284 (50.70%), Postives = 194/284 (68.31%), Query Frame = 0
Query:  112 TSTLFAPSSMSKLPTATTTRSSRTRTHAVQM--NLADRFFRVVKANINSVIQNLEDPEKILEQAVEDMQRDLIKIRQSYAEVSATQKRMERQKEQADNLSNEWYKRAQLALSKGDEELAREALGRRQQQVEVATSLGEQMAVQGSAIDKLFMSMQQLEAKITEAKAKKDQMIARARTAKTSQKVNDMLSSV-TGSTSMDAFDRMNEKVEMLESKAEIAGQLAGVSDSSLEGKFKLLGDGDALDEELKKMKGMLGQGEKKAAGFLPAGEAAAEVDLELEALRKDM 393
            ++  F P     L TA   R     T    M  NL DRFFRVVK+N+ +VI   EDPEK+LEQAV DM  DL K+RQSYAE++ATQKR+ERQ+  A + + EW +RAQLA+ KG+E+LAREAL R+    +   +L EQM +QG A+++L  SM+ LE KI EA++KKDQ+IARARTAKT+Q+V DMLS +  G TSMDAF+RM EKVE LESKAE++ Q++ +S  ++E KFK L +G  +D EL+K+K  +G+  K+ A       A+ EV+ EL  ++  M
Sbjct:   16 STVAFVPQPTFVLQTAQPIRPRLRSTQVTMMADNLVDRFFRVVKSNVGAVISKFEDPEKVLEQAVIDMNEDLRKVRQSYAEITATQKRVERQRNAAADQAAEWMRRAQLAVEKGEEDLAREALQRKVTLSDQVKTLEEQMRLQGEALEQLQASMRTLEMKINEARSKKDQLIARARTAKTAQQVTDMLSGMGLGKTSMDAFERMQEKVETLESKAEVSRQMS-LSSGTVEDKFKSLEEGSGVDAELQKLKASMGKTSKEPA---QLKFASPEVEAELAQIKNKM 295          
BLAST of NO20G00800 vs. NCBI_GenBank
Match: XP_002287533.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED94976.1 predicted protein [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 227.6 bits (579), Expect = 6.600e-56
Identity = 132/260 (50.77%), Postives = 183/260 (70.38%), Query Frame = 0
Query:  142 MNLADRFFRVVKANINSVIQNLEDPEKILEQAVEDMQRDLIKIRQSYAEVSATQKRMERQKEQADNLSNEWYKRAQLALSKGDEELAREALGRRQQQVEVATSLGEQMAVQGSAIDKLFMSMQQLEAKITEAKAKKDQMIARARTAKTSQKVNDMLSSVTGSTSMDAFDRMNEKVEMLESKAEIAGQLAGVSD--------SSLEGKFKLLGDGDALDEELKKMKGMLGQGEKKAAGFLPAGEAAAEVDLELEALRKDMG 394
            MNL DRF RV K+NIN+V+++LEDPEKI+ QA+EDMQ DL+K+RQSYAE++ATQ+R+ +QKEQA+ L+ +WYKRAQLALSKG+E LA+EAL RRQQQVE    L  Q+ +Q +A+DKL+  MQ LEAKI E+K+KK+QM+ARARTA+++QKVNDML  +T        +RM          AE++ ++  +S         SSLE +FK+L  G ++D+EL++MK MLG           A +++   D ELE L+++ G
Sbjct:    1 MNLFDRFTRVAKSNINNVLKSLEDPEKIMNQALEDMQTDLVKVRQSYAEITATQRRLMKQKEQAEALAEDWYKRAQLALSKGEEGLAKEALTRRQQQVETMEGLKLQIDMQATAVDKLYEGMQALEAKILESKSKKEQMVARARTAQSTQKVNDMLGGITXXXXXXXXNRMEXXXXXXXXAAEVSAEMGALSGNALPGSKASSLESQFKMLEAGSSVDKELEEMKKMLGSTSS-------ASKSSGGTDEELERLKREAG 253          
The following BLAST results are available for this feature:
BLAST of NO20G00800 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM22149.16.200e-11581.66membrane-associated 30 kda protein [Nannochloropsi... [more]
CBJ49196.15.700e-7661.09Probable membrane-associated 30 kDa protein, chlor... [more]
XP_002179417.14.000e-6955.96predicted protein [Phaeodactylum tricornutum CCAP ... [more]
EJK65858.12.100e-6251.75hypothetical protein THAOC_13240 [Thalassiosira oc... [more]
XP_009033281.14.000e-6164.02hypothetical protein AURANDRAFT_19943 [Aureococcus... [more]
GAX23513.11.300e-5951.24phage shock protein A [Fistulifera solaris][more]
OEU19725.14.900e-5956.15PspA_IM30-domain-containing protein [Fragilariopsi... [more]
GAX13671.11.100e-5850.35phage shock protein A [Fistulifera solaris][more]
CEL97660.15.900e-5750.70unnamed protein product [Vitrella brassicaformis C... [more]
XP_002287533.16.600e-5650.77predicted protein [Thalassiosira pseudonana CCMP13... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL021nonsL021Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR020ncniR020Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR067ngnoR067Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK002610NSK002610Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO20G00800.1NO20G00800.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|594492gene_6293Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100064g8gene8292Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO20G00800.1NO20G00800.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO20G00800 ID=NO20G00800|Name=NO20G00800|organism=Nannochloropsis oceanica|type=gene|length=1185bp
ATGTGCCTTTGTAACGTCTGCCCTTGTCAGCATCAGGTACACATAAGTAC
GCGCTTGACCATAACTCTCTCATCGTCTTCTTTGGAGCTCATCATTGCCC
GCCGACCCCTCACCACAGAAAAACCAGGGCCGCCGCGACAACCCACTTTC
TTCCACAGCAGCGCCGCCGCAGCGTCAGACTTCTATTTCACCACGCCCAG
CAGCACCACACGACGTCACCGCCTCTGCACAACCATGTTCTCGTTTTCAA
GGAGTACGCCTCTTCTCCTGGCGCTGGCCATGCTAAGCCTGGCCTGCTGC
TGCTGCGTCGTTCATGCATTCATGCCTCATTCTACTTCGACACTCTTCGC
CCCCTCCTCCATGTCCAAGCTCCCTACGGCTACCACAACTCGCAGCAGCC
GCACGCGCACCCACGCCGTGCAGATGAATTTGGCCGATCGGTTTTTCCGT
GTTGTCAAGGCCAACATTAATTCAGTCATCCAAAATTTAGAGGACCCTGA
AAAGATCCTGGAGCAAGCAGTCGAAGACATGCAACGGGACTTGATCAAAA
TTAGGCAATCTTACGCCGAGGTGTCCGCGACGCAAAAGCGCATGGAACGC
CAGAAGGAACAAGCGGATAATCTGTCGAATGAATGGTACAAACGTGCACA
GCTTGCGCTGAGCAAAGGGGATGAGGAGCTGGCCCGCGAGGCGTTGGGAA
GGAGGCAGCAACAGGTGGAGGTTGCCACGTCGCTGGGTGAGCAAATGGCA
GTGCAAGGCTCGGCGATTGATAAATTGTTCATGTCCATGCAGCAGCTCGA
AGCAAAAATCACCGAGGCCAAGGCGAAGAAGGACCAGATGATTGCAAGGG
CTCGAACAGCCAAGACGAGTCAAAAAGTGAATGACATGCTGTCGTCAGTA
ACAGGCTCAACGAGCATGGACGCCTTTGACCGTATGAACGAAAAGGTTGA
GATGCTTGAAAGCAAAGCTGAGATCGCCGGTCAGCTTGCCGGTGTGTCTG
ACAGCTCTTTAGAAGGGAAGTTTAAGCTGTTGGGAGACGGGGATGCGTTG
GACGAGGAGTTGAAGAAAATGAAAGGTATGCTGGGACAGGGGGAGAAGAA
GGCGGCTGGCTTCTTACCCGCCGGGGAGGCAGCCGCAGAGGTGGATTTAG
AGTTGGAGGCGCTGAGAAAAGACATGGGGAAATAG
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protein sequence of NO20G00800.1

>NO20G00800.1-protein ID=NO20G00800.1-protein|Name=NO20G00800.1|organism=Nannochloropsis oceanica|type=polypeptide|length=395bp
MCLCNVCPCQHQVHISTRLTITLSSSSLELIIARRPLTTEKPGPPRQPTF
FHSSAAAASDFYFTTPSSTTRRHRLCTTMFSFSRSTPLLLALAMLSLACC
CCVVHAFMPHSTSTLFAPSSMSKLPTATTTRSSRTRTHAVQMNLADRFFR
VVKANINSVIQNLEDPEKILEQAVEDMQRDLIKIRQSYAEVSATQKRMER
QKEQADNLSNEWYKRAQLALSKGDEELAREALGRRQQQVEVATSLGEQMA
VQGSAIDKLFMSMQQLEAKITEAKAKKDQMIARARTAKTSQKVNDMLSSV
TGSTSMDAFDRMNEKVEMLESKAEIAGQLAGVSDSSLEGKFKLLGDGDAL
DEELKKMKGMLGQGEKKAAGFLPAGEAAAEVDLELEALRKDMGK*
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Synonyms
Publications