NO20G00710, NO20G00710 (gene) Nannochloropsis oceanica

Overview
NameNO20G00710
Unique NameNO20G00710
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1654
Alignment locationchr20:241717..243370 -

Link to JBrowse

Properties
Property NameValue
DescriptionMitochondrial carrier domain-containing protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr20genomechr20:241717..243370 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR023395Mt_carrier_dom
IPR018108Mitochondrial_sb/sol_carrier
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Biological Process
TermDefinition
GO:0006810transport
Vocabulary: Molecular Function
TermDefinition
GO:0005215transporter activity
Homology
BLAST of NO20G00710 vs. NCBI_GenBank
Match: EWM22193.1 (mitochondrial carrier domain-containing protein [Nannochloropsis gaditana])

HSP 1 Score: 590.9 bits (1522), Expect = 3.200e-165
Identity = 290/392 (73.98%), Postives = 328/392 (83.67%), Query Frame = 0
Query:   47 SGTNSSGYTAKGSPL-LPRE--------ACGIACDKEPWVLLEEVLRPRSGYPPPHQSQRAAILRRHSSLSRSAAPVAIPPTRTHAINAYLNQREKQEGKDPGFFKFDSEFQEELDTTVWGRTISGGVSGAIAMGINVAAFMWLRTIMSYQQAHGTPLAKTVGVLYRQGGVRRFYRGLIPALIHAPASRFGDTAGNAGMLAWLDRHAETQNLPIVFKTAAGSVASALWRIVIMPLDTIIICQQVQGDPGWSSLYRKLIRKGPSVLFQGAGASFSANVLGHFPWFAIYNLCESKLPEPSDMKSRLFRNAFIGFAASVASDILSNSLTVIKVCKQASVELLTYRQTTEQILATDGVKGLLGRGLGLRLMANGVQGMAFGVVWKYLDDCIFRGQC 430
            SG+N+    A  +PL  PR+         CG AC+KEPW LLEE LRP    PP ++S R A+LRRHSS+S +AAP+++PPTRTHAINAYL+Q+E++EGK   F + D+E QEELD TVWGR  SGGVSGAIAMGINV AFMWLRTIMSYQQ HGTPL + +  LYR+GGVRRFY+G   AL+H PASRFGDTA NAG LA LDRHAET+NLPIV KTAAGSVASA+WRI +MPLDT+I+CQQVQG PGWS L RKL R GPSVLFQGAGASFSANV+GHFPWFA+YNLCE+ LPEP  MK+R+ RNAF+GFAASVASD+LSNSLTVIKVCKQASVELLTYRQTTEQILA DGV+GLLGRGLGLRLMANG QGM FGVVWK+LDDCIFRGQC
Sbjct:    2 SGSNALWTGAPSAPLSSPRDHTTTAASTRCGRACNKEPWFLLEEALRPAGARPPANESHRNAVLRRHSSMSAAAAPLSLPPTRTHAINAYLHQKEQREGKRVDFLRVDTEMQEELDRTVWGRAFSGGVSGAIAMGINVGAFMWLRTIMSYQQMHGTPLPQVLRTLYREGGVRRFYQGFTAALVHGPASRFGDTAANAGALALLDRHAETRNLPIVLKTAAGSVASAVWRIFLMPLDTLIVCQQVQGYPGWSGLLRKLKRVGPSVLFQGAGASFSANVVGHFPWFAVYNLCETHLPEPGGMKTRVLRNAFMGFAASVASDVLSNSLTVIKVCKQASVELLTYRQTTEQILAVDGVRGLLGRGLGLRLMANGFQGMTFGVVWKFLDDCIFRGQC 393          
BLAST of NO20G00710 vs. NCBI_GenBank
Match: XP_005853486.1 (mitochondrial carrier domain-containing protein [Nannochloropsis gaditana CCMP526] >EKU22874.1 mitochondrial carrier domain-containing protein [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 535.0 bits (1377), Expect = 2.100e-148
Identity = 256/323 (79.26%), Postives = 286/323 (88.54%), Query Frame = 0
Query:  107 LSRSAAPVAIPPTRTHAINAYLNQREKQEGKDPGFFKFDSEFQEELDTTVWGRTISGGVSGAIAMGINVAAFMWLRTIMSYQQAHGTPLAKTVGVLYRQGGVRRFYRGLIPALIHAPASRFGDTAGNAGMLAWLDRHAETQNLPIVFKTAAGSVASALWRIVIMPLDTIIICQQVQGDPGWSSLYRKLIRKGPSVLFQGAGASFSANVLGHFPWFAIYNLCESKLPEPSDMKSRLFRNAFIGFAASVASDILSNSLTVIKVCKQASVELLTYRQTTEQILATDGVKGLLGRGLGLRLMANGVQGMAFGVVWKYLDDCIFRGQC 430
            +S +AAP+++PPTRTHAINAYL+Q+E++EGK   F + D+E QEELD TVWGR  SGGVSGAIAMGINV AFMWLRTIMSYQQ HGTPL + +  LYR+GGVRRFY+G   AL+H PASRFGDTA NAG LA LDRHAET+NLPIV KTAAGSVASA+WRI +MPLDT+I+CQQVQG PGWS L RKL R GPSVLFQGAGASFSANV+GHFPWFA+YNLCE+ LPEP  MK+R+ RNAF+GFAASVASD+LSNSLTVIKVCKQASVELLTYRQTTEQILA DGV+GLLGRGLGLRLMANG QGM FGVVWK+LDDCIFRGQC
Sbjct:    1 MSAAAAPLSLPPTRTHAINAYLHQKEQREGKRVDFLRVDTEMQEELDRTVWGRAFSGGVSGAIAMGINVGAFMWLRTIMSYQQMHGTPLPQVLRTLYREGGVRRFYQGFTAALVHGPASRFGDTAANAGALALLDRHAETRNLPIVLKTAAGSVASAVWRIFLMPLDTLIVCQQVQGYPGWSGLLRKLKRVGPSVLFQGAGASFSANVVGHFPWFAVYNLCETHLPEPGGMKTRVLRNAFMGFAASVASDVLSNSLTVIKVCKQASVELLTYRQTTEQILAVDGVRGLLGRGLGLRLMANGFQGMTFGVVWKFLDDCIFRGQC 323          
BLAST of NO20G00710 vs. NCBI_GenBank
Match: XP_014152214.1 (hypothetical protein SARC_09248 [Sphaeroforma arctica JP610] >KNC78312.1 hypothetical protein SARC_09248 [Sphaeroforma arctica JP610])

HSP 1 Score: 274.6 bits (701), Expect = 5.100e-70
Identity = 136/275 (49.45%), Postives = 179/275 (65.09%), Query Frame = 0
Query:  150 EELDTTVWGRTISGGVSGAIAMGINVAAFMWLRTIMSYQQAHGTPLAKTVGVLYRQGGVRRFYRGLIPALIHAPASRFGDTAGNAGMLAWLDRHAETQNLPIVFKTAAGSVASALWRIVIMPLDTIIICQQVQGDPGWSSLYRKLIRKGPSVLFQGAGASFSANVLGHFPWFAIYNLCESKLP--EPSDMKSRLFRNAFIGFAASVASDILSNSLTVIKVCKQASVELLTYRQTTEQILATDGVKGLLGRGLGLRLMANGVQGMAFGVVWKYLDD 423
            +E+ T    R I GGV GA+AMGINV + MWLRT M+YQ  +GT   +    LY++GG+RRFYRG  PAL   P SRFGDTA NAG+LA LD +  T NLP+  KT   S A+A WR+ +MP+DT+    QV+G  G S L  KL   GP VL+ GA A+  A  +GH+PWF +YNL + KLP  E  +   +L RNA IGF ASV SD  SNS+ V+K  KQ +   ++Y +T + ++  DG+ GL GRGL  R++AN +QGM F V+WK L++
Sbjct:   19 QEILTAAGKRAIGGGVPGAVAMGINVTSLMWLRTTMNYQYRYGTSTTEAFKHLYKEGGIRRFYRGYGPALFQGPLSRFGDTAANAGVLALLDSYDTTSNLPVGVKTIFASAAAATWRVFLMPVDTLKTTMQVEGAKGVSQLRGKLSSGGPKVLYSGAIAASGATFVGHYPWFFVYNLLQEKLPKAEKDETLKKLGRNAVIGFCASVVSDTCSNSIRVVKTTKQTAAVQMSYPETVKMVIKQDGLIGLFGRGLKTRILANAMQGMLFSVLWKALEE 293          
BLAST of NO20G00710 vs. NCBI_GenBank
Match: XP_001746306.1 (hypothetical protein [Monosiga brevicollis MX1] >EDQ88693.1 predicted protein [Monosiga brevicollis MX1])

HSP 1 Score: 271.9 bits (694), Expect = 3.300e-69
Identity = 132/268 (49.25%), Postives = 176/268 (65.67%), Query Frame = 0
Query:  159 RTISGGVSGAIAMGINVAAFMWLRTIMSYQQAHGTPLAKTVGVLYRQGGVRRFYRGLIPALIHAPASRFGDTAGNAGMLAWLDRHAETQNLPIVFKTAAGSVASALWRIVIMPLDTIIICQQVQGDPGWSSLYRKLIRKGPSVLFQGAGASFSANVLGHFPWFAIYNLCESKLPEPSDMKSRLFRNAFIGFAASVASDILSNSLTVIKVCKQASVELLTYRQTTEQILATDGVKGLLGRGLGLRLMANGVQGMAFGVVWKYLDDCIFR 427
            R + GG +GA AMG+ V + +WLRTIM+YQ  +G  L   V  LY +GGV RFY+GL+PAL   P +RFGDTA NAG LA LD +  T +LP+  KT A S A+A WR+ +MP+DT     QV+G  G S L  K+   GP VL+ GA A+ SA   GH+PWFA +N+ +  +P+   +  +  RNA IGF ASV SD +SNS+ V KV KQA+ E +TY Q  + ++A DG+ GL+ RGL  R++ANG+QGM F VVWK L +  F+
Sbjct:   38 RAMGGGAAGAAAMGVQVVSLLWLRTIMNYQYRNGGSLRAVVRTLYAEGGVLRFYQGLLPALAQGPLARFGDTAANAGTLALLDSYEVTASLPVGVKTVAASGAAAFWRVFLMPIDTCKTIMQVEGKQGLSKLGAKIRVGGPGVLYHGALAAMSATFAGHYPWFATFNILQESIPQQEGVWGKFARNAGIGFCASVVSDTVSNSIRVTKVAKQAATESITYMQAVKGVIAKDGIAGLMFRGLQTRILANGLQGMMFSVVWKALQEQYFK 305          
BLAST of NO20G00710 vs. NCBI_GenBank
Match: CBN78569.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 270.4 bits (690), Expect = 9.600e-69
Identity = 133/279 (47.67%), Postives = 182/279 (65.23%), Query Frame = 0
Query:  149 QEELDTTVWGRTISGGVSGAIAMGINVAAFMWLRTIMSYQQAHGTPLAKTVGVLYRQGGVRRFYRGLIPALIHAPASRFGDTAGNAGMLAWLDRHAETQNLPIVFKTAAGSVASALWRIVIMPLDTIIICQQVQGDPGWSSLYRKLIRKGPSVLFQGAGASFSANVLGHFPWFAIYNLCESKLPEPSDMKSRLFRNAFIGFAASVASDILSNSLTVIKVCKQASVELLTYRQTTEQILATDGVKGLLGRGLGLRLMANGVQGMAFGVVWKYLDDCIFRG 428
            QE LD ++  R + GG +GA+AMGINV   MW+RT ++YQ  HG         LY QGG+ RFYRG+ PALI  P SRFGDTA N G+LA ++ +  T+NLP+  KT   SVA+ALWRI +MP+DT     QV+G  G+ +L +K+   GP+VL+ GA A+ SA ++GH+PWF  YN  + ++P+      +L RN  IGF +SV SD  SNS+ V+KV KQ+  E +TY Q    ++A DG+ GL GRGL  ++MANG+QG+ F V+WK   D +  G
Sbjct:   13 QEILDKSL-KRALGGGFAGALAMGINVGTLMWMRTTINYQLRHGGGTMDAFRTLYSQGGIGRFYRGVGPALIQGPMSRFGDTAANTGVLALMESYESTKNLPVGAKTLCASVAAALWRIFLMPVDTTKTIMQVEGKEGFPALVKKVKVGGPTVLYHGALAASSATLVGHYPWFFTYNYLQERIPKQDSGIKKLARNGIIGFCSSVVSDTCSNSIRVVKVYKQSHTEGVTYVQAVRDVIAKDGLVGLFGRGLKTKIMANGMQGLMFSVLWKLSKDFVKSG 290          
BLAST of NO20G00710 vs. NCBI_GenBank
Match: XP_004987768.1 (MC family transporter [Salpingoeca rosetta] >EGD81234.1 MC family transporter [Salpingoeca rosetta])

HSP 1 Score: 270.0 bits (689), Expect = 1.300e-68
Identity = 132/264 (50.00%), Postives = 173/264 (65.53%), Query Frame = 0
Query:  159 RTISGGVSGAIAMGINVAAFMWLRTIMSYQQAHGTPLAKTVGVLYRQGGVRRFYRGLIPALIHAPASRFGDTAGNAGMLAWLDRHAETQNLPIVFKTAAGSVASALWRIVIMPLDTIIICQQVQGDPGWSSLYRKLIRKGPSVLFQGAGASFSANVLGHFPWFAIYNLCESKLPEPSDMKSRLFRNAFIGFAASVASDILSNSLTVIKVCKQASVELLTYRQTTEQILATDGVKGLLGRGLGLRLMANGVQGMAFGVVWKYLDD 423
            R + GG +GA AM   V   MWLRT M+YQ  +GT     +  LY+QGGV RFYRG+ PAL+  P SRFGDTA N G+L  LD +  T++LP+  KT A S  +ALWR+V+MP+DT+    QV+G  G + L  KL   GP VL+ G+ A+ SA  +GHFPWFA +N   + +PE  D  ++L R A IGF +SV SD  SNS+ V KV KQA  + +TY Q   ++++ DGV GL  RGLG RL+ANG+QGM F VVWK L++
Sbjct:   22 RALGGGGAGAAAMVTQVCTLMWLRTTMNYQYRYGTSTPAAIKALYKQGGVLRFYRGIGPALLQGPLSRFGDTAANTGILTLLDSYESTRSLPVAVKTVAASGTAALWRVVLMPIDTLKTVMQVEGHDGMTKLRAKLKAGGPRVLYHGSLAALSATFVGHFPWFATFNYLNATIPEAEDKWAKLARRAAIGFCSSVISDTTSNSIRVTKVTKQAHTKPITYVQAVREVISKDGVSGLFFRGLGTRLIANGMQGMMFTVVWKGLEE 285          
BLAST of NO20G00710 vs. NCBI_GenBank
Match: CEM36155.1 (unnamed protein product [Vitrella brassicaformis CCMP3155])

HSP 1 Score: 261.5 bits (667), Expect = 4.500e-66
Identity = 133/270 (49.26%), Postives = 173/270 (64.07%), Query Frame = 0
Query:  159 RTISGGVSGAIAMGINVAAFMWLRTIMSYQQAHGTPLAKTVGVLYRQGGVRRFYRGLIPALIHAPASRFGDTAGNAGMLAWLDRHAETQNLPIVFKTAAGSVASALWRIVIMPLDTIIICQQVQGDPGWSSLYRKLIRKGPSVLFQGAGASFSANVLGHFPWFAIYNLCESKLP--EPSDMKSRLFRNAFIGFAASVASDILSNSLTVIKVCKQASVELLTYRQTTEQILATDGVKGLLGRGLGLRLMANGVQGMAFGVVWKYLDDCIFR 427
            R + GG+SG+ A  + V + MWLRT M+YQ   G PL  T+  L+ +GGV RFYRGL  AL+ AP S+FGDTA NAG+LA LD    T  LP+  KTA+ SVA+ LWRIVI P+DT     QV+G  G   +  K+   GP+VL+ GA A+ +A  +GH+PWF  YN  +  LP  EP D   +L RNAFIG  AS  +D LSNSL VIK  KQ S +  +YR+    I+  DGV+GL GRGL  RL+ NGVQGM F V +++ ++  F+
Sbjct:   70 RAVGGGLSGSAASVLQVFSLMWLRTSMNYQYTTGLPLNTTLATLWSEGGVPRFYRGLPFALVQAPLSKFGDTAANAGVLALLDSFESTMGLPLFVKTASASVAAGLWRIVIFPVDTFKTTMQVRGAAGIPQVSDKVKETGPTVLYNGAIAASAATFVGHYPWFFTYNYLQEHLPPVEPGDTLMKLMRNAFIGLCASSLADSLSNSLRVIKTTKQTSEDSPSYREVVSGIIEKDGVRGLFGRGLATRLLTNGVQGMLFAVAYRFFEEQFFK 339          
BLAST of NO20G00710 vs. NCBI_GenBank
Match: OSX75515.1 (hypothetical protein BU14_0234s0041 [Porphyra umbilicalis])

HSP 1 Score: 261.2 bits (666), Expect = 5.800e-66
Identity = 128/266 (48.12%), Postives = 172/266 (64.66%), Query Frame = 0
Query:  158 GRTISGGVSGAIAMGINVAAFMWLRTIMSYQQAHGTPLAKTVGVLYRQGGVRRFYRGLIPALIHAPASRFGDTAGNAGMLAWLDRHAETQNLPIVFKTAAGSVASALWRIVIMPLDTIIICQQVQGDPGWSSLYRKL-IRKGPSVLFQGAGASFSANVLGHFPWFAIYNLCESKLPEPSDMKSRLFRNAFIGFAASVASDILSNSLTVIKVCKQASVELLTYRQTTEQILATDGVKGLLGRGLGLRLMANGVQGMAFGVVWKYLDD 423
            G+ + GG+ GA AMGI V   +WLRT M+YQ  HG      +  LY +GGVRRFYRG  PAL+ AP SRFGDTA NAG+++ LD +  T +LP++ KT+A S A+A +RI +MP+D +    QV G  G   L  K     G  V + GA  + +A  +GHFPWF++YN   + LP P D+ S+L RNA IGF+ASV SD  SNSL V+K  +Q   E+++Y     Q++A DGV GL GRGL  R++ANG QG+ F V+WK L++
Sbjct:   69 GKALRGGLPGAAAMGIQVTTLLWLRTTMNYQYRHGLSTGAALRTLYAEGGVRRFYRGFAPALVQAPMSRFGDTAANAGVISLLDSYEATASLPVIAKTSAASAAAAGFRIFLMPVDAVKTSLQVNGASGLRLLLTKARAGGGVPVFYHGALGAAAATYVGHFPWFSVYNTLNAALPVPEDLPSKLGRNAVIGFSASVVSDCCSNSLRVVKTYRQTHAEVVSYPSAVRQVVAQDGVAGLFGRGLQTRILANGFQGLLFTVLWKLLEE 334          
BLAST of NO20G00710 vs. NCBI_GenBank
Match: KDD75437.1 (hypothetical protein H632_c685p1 [Helicosporidium sp. ATCC 50920])

HSP 1 Score: 258.8 bits (660), Expect = 2.900e-65
Identity = 124/264 (46.97%), Postives = 174/264 (65.91%), Query Frame = 0
Query:  159 RTISGGVSGAIAMGINVAAFMWLRTIMSYQQAHGTPLAKTVGVLYRQGGVRRFYRGLIPALIHAPASRFGDTAGNAGMLAWLDRHAETQNLPIVFKTAAGSVASALWRIVIMPLDTIIICQQVQGDPGWSSLYRKLIRKGPSVLFQGAGASFSANVLGHFPWFAIYNLCESKLPEPSDMKSRLFRNAFIGFAASVASDILSNSLTVIKVCKQASVELLTYRQTTEQILATDGVKGLLGRGLGLRLMANGVQGMAFGVVWKYLDD 423
            R + GGV GA AMGI V + MWLRT ++YQ  +GT     +  LY++GGV RFYRGL PAL+  P SRFGDTA NAG+L  L+ H+ T+++PI  KTAA S A+  +RI +MP+D +    QV+G  G+  L  K+   GPSVL+ GA A+ +A   GH+PWF  YN  +++LP   ++  +L R+A IGF+AS  SD +SNS+ V+K  KQ +   +TY Q    ++  DGV GL+GRGL  +++ANG+QG+ F V+W+   D
Sbjct:   70 RALGGGVPGAAAMGIQVLSLMWLRTTVNYQYRYGTTTTVALKTLYKEGGVVRFYRGLGPALVQGPLSRFGDTAANAGVLTLLNEHSSTRDMPIALKTAAASAAAGGFRIFLMPVDAMKTIMQVEGKGGFGKLAAKVRVGGPSVLYHGAIAAAAATWAGHYPWFFTYNYLDAQLPRYDELHKKLLRSAVIGFSASAISDTISNSIRVVKTTKQTATTPMTYPQVVRMVVKEDGVLGLMGRGLKTKILANGLQGLLFSVLWRIGQD 333          
BLAST of NO20G00710 vs. NCBI_GenBank
Match: PSC76543.1 (mitochondrial carrier [Micractinium conductrix])

HSP 1 Score: 257.7 bits (657), Expect = 6.500e-65
Identity = 127/264 (48.11%), Postives = 175/264 (66.29%), Query Frame = 0
Query:  159 RTISGGVSGAIAMGINVAAFMWLRTIMSYQQAHGTPLAKTVGVLYRQGGVRRFYRGLIPALIHAPASRFGDTAGNAGMLAWLDRHAETQNLPIVFKTAAGSVASALWRIVIMPLDTIIICQQVQGDPGWSSLYRKLIRKGPSVLFQGAGASFSANVLGHFPWFAIYNLCESKLPEPSDMKSRLFRNAFIGFAASVASDILSNSLTVIKVCKQASVELLTYRQTTEQILATDGVKGLLGRGLGLRLMANGVQGMAFGVVWKYLDD 423
            R + GG+ GA AMG+ V + MWLRT ++YQ  +GT +++ +  LY+ GGV RFYRGL PAL+  P SRFGDTA NAGMLA L    E  +LP+  KT A S A+A +RIV+MP+D      QV+G  G+S L  K+   GP+VL+ GA A+ +A  +GH+PWF +YN     LP+  D+  RL R+AFIGF AS  SD  SNS+ V+K  KQ +   L+Y +  ++++A DGV GL GRGL  +++ANG+QG+ F V+W+   D
Sbjct:  497 RALGGGIPGAAAMGVQVLSLMWLRTTVNYQYRYGTSMSQALKHLYKDGGVVRFYRGLGPALLQGPLSRFGDTAANAGMLALL----EGVDLPVALKTVAASGAAAAFRIVLMPVDAAKTIMQVEGKGGFSKLLAKVRVGGPTVLYHGALAASAATFVGHYPWFFVYNSLNESLPQYDDLPKRLLRSAFIGFCASAVSDTCSNSIRVVKTTKQTATVPLSYPEAVKEVVAKDGVVGLFGRGLKTKIVANGLQGLMFSVLWRMGQD 756          
The following BLAST results are available for this feature:
BLAST of NO20G00710 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM22193.13.200e-16573.98mitochondrial carrier domain-containing protein [N... [more]
XP_005853486.12.100e-14879.26mitochondrial carrier domain-containing protein [N... [more]
XP_014152214.15.100e-7049.45hypothetical protein SARC_09248 [Sphaeroforma arct... [more]
XP_001746306.13.300e-6949.25hypothetical protein [Monosiga brevicollis MX1] >E... [more]
CBN78569.19.600e-6947.67conserved unknown protein [Ectocarpus siliculosus][more]
XP_004987768.11.300e-6850.00MC family transporter [Salpingoeca rosetta] >EGD81... [more]
CEM36155.14.500e-6649.26unnamed protein product [Vitrella brassicaformis C... [more]
OSX75515.15.800e-6648.12hypothetical protein BU14_0234s0041 [Porphyra umbi... [more]
KDD75437.12.900e-6546.97hypothetical protein H632_c685p1 [Helicosporidium ... [more]
PSC76543.16.500e-6548.11mitochondrial carrier [Micractinium conductrix][more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL024nonsL024Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL022nonsL022Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL021nonsL021Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR020ncniR020Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR068ngnoR068Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR067ngnoR067Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK002564NSK002564Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO20G00710.1NO20G00710.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|594452gene_6285Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO20G00710.1NO20G00710.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO20G00710 ID=NO20G00710|Name=NO20G00710|organism=Nannochloropsis oceanica|type=gene|length=1654bp
ATGCACTTACGACGCCAACTGCAACACAAACGAAgtacgtaaatagattt
ggaggaaaaggaaggctagggcctgcgtggttgacaccacctgaggcaat
agggcttgatctcatctatccagcactcttcctttccctccacatgcgta
cgcaacaaccacagATTATCCTGAAATTTCGCAAAGAGACGACGTCAATA
AAAAGCTTGTGATTGTCCTACTTGATTTAACAACgtcccacgcgccatcc
atcaccatctaccctacctaaattacaacaagtacaatcctggagaatat
ccgcctgcattcgtccgcctggtcctttccgtcccactcttcctcttctt
cttcttcctcttcttcctcctccttctcctcctcctcttccttgacttgc
ggtggcagcctctgtcacagaggcgtgacaagtgtggtagggtgcgtgac
ctatcctgccctttccagGAGCATCACCCGCACTCGCATCACCAGCACTA
GCAGCGGTACCAACAGCAGCGGGTATACAGCCAAGGGCTCGCCGCTGCTT
CCTCGGGAGGCATGCGGTATCGCGTGTGATAAGGAGCCATGGGTGCTGCT
AGAGGAAGTACTTCGACCCCGATCCGGGTACCCGCCGCCCCACCAGTCCC
AACGCGCAGCGATACTGAGGCGTCACTCATCTCTCTCTCGTTCTGCCGCA
CCCGTCGCCATCCCCCCTACCCGCACGCACGCCATTAATGCCTACCTAAA
TCAGAGAGAGAAGCAGGAGGGGAAAGACCCCGGTTTCTTCAAGTTTGACT
CAGAATTTCAAGAGGAACTCGATACCACCGTATGGGGGCGGACGATTTCG
GGGGGAGTGTCGGGAGCAATCGCCATGGGCATCAATGTGGCTGCCTTTAT
GTGGCTCCGCACGATCATGTCCTATCAACAAGCACATGGCACACCTTTGG
CCAAGACAGTTGGCGTTCTTTACCGGCAGGGTGGCGTACGCCGATTCTAT
CGTGGTTTGATCCCGGCCTTGATTCATGCCCCCGCCTCCCGCTTTGGAGA
TACGGCCGGCAACGCCGGAATGCTGGCCTGGCTAGACCGGCATGCGGAGA
CCCAAAACTTGCCCATTGTCTTCAAGACGGCTGCAGGTTCTGTGGCTTCG
GCATTGTGGCGCATCGTGATCATGCCTTTGGACACGATCATCATCTGCCA
GCAAGTGCAAGGAGACCCCGGCTGGTCCTCCCTCTACCGCAAGCTGATTC
GAAAGGGCCCGTCGGTGCTTTTCCAAGGCGCTGGGGCATCCTTCTCTGCA
AACGTATTGGGACATTTTCCTTGGTTTGCCATTTATAACCTTTGTGAGTC
CAAGCTCCCGGAGCCCTCCGATATGAAGTCCCGCCTGTTCCGGAATGCCT
TTATCGGTTTCGCGGCCAGTGTGGCCTCCGACATCCTCTCGAATTCCTTG
ACAGTCATCAAGGTCTGCAAACAAGCAAGCGTGGAGCTCCTGACCTATCG
GCAGACGACGGAACAGATCTTGGCTACGGATGGAGTGAAAGGATTGTTAG
GTCGTGGATTAGGCCTGCGTTTGATGGCGAATGGCGTCCAAGGTATGGCG
TTCGGTGTTGTCTGGAAGTACTTGGACGATTGCATCTTCCGTGGGCAATG
TTAA
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protein sequence of NO20G00710.1

>NO20G00710.1-protein ID=NO20G00710.1-protein|Name=NO20G00710.1|organism=Nannochloropsis oceanica|type=polypeptide|length=430bp
MHLRRQLQHKRNYPEISQRDDVNKKLVIVLLDLTTSITRTRITSTSSGTN
SSGYTAKGSPLLPREACGIACDKEPWVLLEEVLRPRSGYPPPHQSQRAAI
LRRHSSLSRSAAPVAIPPTRTHAINAYLNQREKQEGKDPGFFKFDSEFQE
ELDTTVWGRTISGGVSGAIAMGINVAAFMWLRTIMSYQQAHGTPLAKTVG
VLYRQGGVRRFYRGLIPALIHAPASRFGDTAGNAGMLAWLDRHAETQNLP
IVFKTAAGSVASALWRIVIMPLDTIIICQQVQGDPGWSSLYRKLIRKGPS
VLFQGAGASFSANVLGHFPWFAIYNLCESKLPEPSDMKSRLFRNAFIGFA
ASVASDILSNSLTVIKVCKQASVELLTYRQTTEQILATDGVKGLLGRGLG
LRLMANGVQGMAFGVVWKYLDDCIFRGQC*
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Synonyms
Publications