NO20G00710, NO20G00710 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO20G00710 vs. NCBI_GenBank
Match: EWM22193.1 (mitochondrial carrier domain-containing protein [Nannochloropsis gaditana]) HSP 1 Score: 590.9 bits (1522), Expect = 3.200e-165 Identity = 290/392 (73.98%), Postives = 328/392 (83.67%), Query Frame = 0 Query: 47 SGTNSSGYTAKGSPL-LPRE--------ACGIACDKEPWVLLEEVLRPRSGYPPPHQSQRAAILRRHSSLSRSAAPVAIPPTRTHAINAYLNQREKQEGKDPGFFKFDSEFQEELDTTVWGRTISGGVSGAIAMGINVAAFMWLRTIMSYQQAHGTPLAKTVGVLYRQGGVRRFYRGLIPALIHAPASRFGDTAGNAGMLAWLDRHAETQNLPIVFKTAAGSVASALWRIVIMPLDTIIICQQVQGDPGWSSLYRKLIRKGPSVLFQGAGASFSANVLGHFPWFAIYNLCESKLPEPSDMKSRLFRNAFIGFAASVASDILSNSLTVIKVCKQASVELLTYRQTTEQILATDGVKGLLGRGLGLRLMANGVQGMAFGVVWKYLDDCIFRGQC 430 SG+N+ A +PL PR+ CG AC+KEPW LLEE LRP PP ++S R A+LRRHSS+S +AAP+++PPTRTHAINAYL+Q+E++EGK F + D+E QEELD TVWGR SGGVSGAIAMGINV AFMWLRTIMSYQQ HGTPL + + LYR+GGVRRFY+G AL+H PASRFGDTA NAG LA LDRHAET+NLPIV KTAAGSVASA+WRI +MPLDT+I+CQQVQG PGWS L RKL R GPSVLFQGAGASFSANV+GHFPWFA+YNLCE+ LPEP MK+R+ RNAF+GFAASVASD+LSNSLTVIKVCKQASVELLTYRQTTEQILA DGV+GLLGRGLGLRLMANG QGM FGVVWK+LDDCIFRGQC Sbjct: 2 SGSNALWTGAPSAPLSSPRDHTTTAASTRCGRACNKEPWFLLEEALRPAGARPPANESHRNAVLRRHSSMSAAAAPLSLPPTRTHAINAYLHQKEQREGKRVDFLRVDTEMQEELDRTVWGRAFSGGVSGAIAMGINVGAFMWLRTIMSYQQMHGTPLPQVLRTLYREGGVRRFYQGFTAALVHGPASRFGDTAANAGALALLDRHAETRNLPIVLKTAAGSVASAVWRIFLMPLDTLIVCQQVQGYPGWSGLLRKLKRVGPSVLFQGAGASFSANVVGHFPWFAVYNLCETHLPEPGGMKTRVLRNAFMGFAASVASDVLSNSLTVIKVCKQASVELLTYRQTTEQILAVDGVRGLLGRGLGLRLMANGFQGMTFGVVWKFLDDCIFRGQC 393
BLAST of NO20G00710 vs. NCBI_GenBank
Match: XP_005853486.1 (mitochondrial carrier domain-containing protein [Nannochloropsis gaditana CCMP526] >EKU22874.1 mitochondrial carrier domain-containing protein [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 535.0 bits (1377), Expect = 2.100e-148 Identity = 256/323 (79.26%), Postives = 286/323 (88.54%), Query Frame = 0 Query: 107 LSRSAAPVAIPPTRTHAINAYLNQREKQEGKDPGFFKFDSEFQEELDTTVWGRTISGGVSGAIAMGINVAAFMWLRTIMSYQQAHGTPLAKTVGVLYRQGGVRRFYRGLIPALIHAPASRFGDTAGNAGMLAWLDRHAETQNLPIVFKTAAGSVASALWRIVIMPLDTIIICQQVQGDPGWSSLYRKLIRKGPSVLFQGAGASFSANVLGHFPWFAIYNLCESKLPEPSDMKSRLFRNAFIGFAASVASDILSNSLTVIKVCKQASVELLTYRQTTEQILATDGVKGLLGRGLGLRLMANGVQGMAFGVVWKYLDDCIFRGQC 430 +S +AAP+++PPTRTHAINAYL+Q+E++EGK F + D+E QEELD TVWGR SGGVSGAIAMGINV AFMWLRTIMSYQQ HGTPL + + LYR+GGVRRFY+G AL+H PASRFGDTA NAG LA LDRHAET+NLPIV KTAAGSVASA+WRI +MPLDT+I+CQQVQG PGWS L RKL R GPSVLFQGAGASFSANV+GHFPWFA+YNLCE+ LPEP MK+R+ RNAF+GFAASVASD+LSNSLTVIKVCKQASVELLTYRQTTEQILA DGV+GLLGRGLGLRLMANG QGM FGVVWK+LDDCIFRGQC Sbjct: 1 MSAAAAPLSLPPTRTHAINAYLHQKEQREGKRVDFLRVDTEMQEELDRTVWGRAFSGGVSGAIAMGINVGAFMWLRTIMSYQQMHGTPLPQVLRTLYREGGVRRFYQGFTAALVHGPASRFGDTAANAGALALLDRHAETRNLPIVLKTAAGSVASAVWRIFLMPLDTLIVCQQVQGYPGWSGLLRKLKRVGPSVLFQGAGASFSANVVGHFPWFAVYNLCETHLPEPGGMKTRVLRNAFMGFAASVASDVLSNSLTVIKVCKQASVELLTYRQTTEQILAVDGVRGLLGRGLGLRLMANGFQGMTFGVVWKFLDDCIFRGQC 323
BLAST of NO20G00710 vs. NCBI_GenBank
Match: XP_014152214.1 (hypothetical protein SARC_09248 [Sphaeroforma arctica JP610] >KNC78312.1 hypothetical protein SARC_09248 [Sphaeroforma arctica JP610]) HSP 1 Score: 274.6 bits (701), Expect = 5.100e-70 Identity = 136/275 (49.45%), Postives = 179/275 (65.09%), Query Frame = 0 Query: 150 EELDTTVWGRTISGGVSGAIAMGINVAAFMWLRTIMSYQQAHGTPLAKTVGVLYRQGGVRRFYRGLIPALIHAPASRFGDTAGNAGMLAWLDRHAETQNLPIVFKTAAGSVASALWRIVIMPLDTIIICQQVQGDPGWSSLYRKLIRKGPSVLFQGAGASFSANVLGHFPWFAIYNLCESKLP--EPSDMKSRLFRNAFIGFAASVASDILSNSLTVIKVCKQASVELLTYRQTTEQILATDGVKGLLGRGLGLRLMANGVQGMAFGVVWKYLDD 423 +E+ T R I GGV GA+AMGINV + MWLRT M+YQ +GT + LY++GG+RRFYRG PAL P SRFGDTA NAG+LA LD + T NLP+ KT S A+A WR+ +MP+DT+ QV+G G S L KL GP VL+ GA A+ A +GH+PWF +YNL + KLP E + +L RNA IGF ASV SD SNS+ V+K KQ + ++Y +T + ++ DG+ GL GRGL R++AN +QGM F V+WK L++ Sbjct: 19 QEILTAAGKRAIGGGVPGAVAMGINVTSLMWLRTTMNYQYRYGTSTTEAFKHLYKEGGIRRFYRGYGPALFQGPLSRFGDTAANAGVLALLDSYDTTSNLPVGVKTIFASAAAATWRVFLMPVDTLKTTMQVEGAKGVSQLRGKLSSGGPKVLYSGAIAASGATFVGHYPWFFVYNLLQEKLPKAEKDETLKKLGRNAVIGFCASVVSDTCSNSIRVVKTTKQTAAVQMSYPETVKMVIKQDGLIGLFGRGLKTRILANAMQGMLFSVLWKALEE 293
BLAST of NO20G00710 vs. NCBI_GenBank
Match: XP_001746306.1 (hypothetical protein [Monosiga brevicollis MX1] >EDQ88693.1 predicted protein [Monosiga brevicollis MX1]) HSP 1 Score: 271.9 bits (694), Expect = 3.300e-69 Identity = 132/268 (49.25%), Postives = 176/268 (65.67%), Query Frame = 0 Query: 159 RTISGGVSGAIAMGINVAAFMWLRTIMSYQQAHGTPLAKTVGVLYRQGGVRRFYRGLIPALIHAPASRFGDTAGNAGMLAWLDRHAETQNLPIVFKTAAGSVASALWRIVIMPLDTIIICQQVQGDPGWSSLYRKLIRKGPSVLFQGAGASFSANVLGHFPWFAIYNLCESKLPEPSDMKSRLFRNAFIGFAASVASDILSNSLTVIKVCKQASVELLTYRQTTEQILATDGVKGLLGRGLGLRLMANGVQGMAFGVVWKYLDDCIFR 427 R + GG +GA AMG+ V + +WLRTIM+YQ +G L V LY +GGV RFY+GL+PAL P +RFGDTA NAG LA LD + T +LP+ KT A S A+A WR+ +MP+DT QV+G G S L K+ GP VL+ GA A+ SA GH+PWFA +N+ + +P+ + + RNA IGF ASV SD +SNS+ V KV KQA+ E +TY Q + ++A DG+ GL+ RGL R++ANG+QGM F VVWK L + F+ Sbjct: 38 RAMGGGAAGAAAMGVQVVSLLWLRTIMNYQYRNGGSLRAVVRTLYAEGGVLRFYQGLLPALAQGPLARFGDTAANAGTLALLDSYEVTASLPVGVKTVAASGAAAFWRVFLMPIDTCKTIMQVEGKQGLSKLGAKIRVGGPGVLYHGALAAMSATFAGHYPWFATFNILQESIPQQEGVWGKFARNAGIGFCASVVSDTVSNSIRVTKVAKQAATESITYMQAVKGVIAKDGIAGLMFRGLQTRILANGLQGMMFSVVWKALQEQYFK 305
BLAST of NO20G00710 vs. NCBI_GenBank
Match: CBN78569.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 270.4 bits (690), Expect = 9.600e-69 Identity = 133/279 (47.67%), Postives = 182/279 (65.23%), Query Frame = 0 Query: 149 QEELDTTVWGRTISGGVSGAIAMGINVAAFMWLRTIMSYQQAHGTPLAKTVGVLYRQGGVRRFYRGLIPALIHAPASRFGDTAGNAGMLAWLDRHAETQNLPIVFKTAAGSVASALWRIVIMPLDTIIICQQVQGDPGWSSLYRKLIRKGPSVLFQGAGASFSANVLGHFPWFAIYNLCESKLPEPSDMKSRLFRNAFIGFAASVASDILSNSLTVIKVCKQASVELLTYRQTTEQILATDGVKGLLGRGLGLRLMANGVQGMAFGVVWKYLDDCIFRG 428 QE LD ++ R + GG +GA+AMGINV MW+RT ++YQ HG LY QGG+ RFYRG+ PALI P SRFGDTA N G+LA ++ + T+NLP+ KT SVA+ALWRI +MP+DT QV+G G+ +L +K+ GP+VL+ GA A+ SA ++GH+PWF YN + ++P+ +L RN IGF +SV SD SNS+ V+KV KQ+ E +TY Q ++A DG+ GL GRGL ++MANG+QG+ F V+WK D + G Sbjct: 13 QEILDKSL-KRALGGGFAGALAMGINVGTLMWMRTTINYQLRHGGGTMDAFRTLYSQGGIGRFYRGVGPALIQGPMSRFGDTAANTGVLALMESYESTKNLPVGAKTLCASVAAALWRIFLMPVDTTKTIMQVEGKEGFPALVKKVKVGGPTVLYHGALAASSATLVGHYPWFFTYNYLQERIPKQDSGIKKLARNGIIGFCSSVVSDTCSNSIRVVKVYKQSHTEGVTYVQAVRDVIAKDGLVGLFGRGLKTKIMANGMQGLMFSVLWKLSKDFVKSG 290
BLAST of NO20G00710 vs. NCBI_GenBank
Match: XP_004987768.1 (MC family transporter [Salpingoeca rosetta] >EGD81234.1 MC family transporter [Salpingoeca rosetta]) HSP 1 Score: 270.0 bits (689), Expect = 1.300e-68 Identity = 132/264 (50.00%), Postives = 173/264 (65.53%), Query Frame = 0 Query: 159 RTISGGVSGAIAMGINVAAFMWLRTIMSYQQAHGTPLAKTVGVLYRQGGVRRFYRGLIPALIHAPASRFGDTAGNAGMLAWLDRHAETQNLPIVFKTAAGSVASALWRIVIMPLDTIIICQQVQGDPGWSSLYRKLIRKGPSVLFQGAGASFSANVLGHFPWFAIYNLCESKLPEPSDMKSRLFRNAFIGFAASVASDILSNSLTVIKVCKQASVELLTYRQTTEQILATDGVKGLLGRGLGLRLMANGVQGMAFGVVWKYLDD 423 R + GG +GA AM V MWLRT M+YQ +GT + LY+QGGV RFYRG+ PAL+ P SRFGDTA N G+L LD + T++LP+ KT A S +ALWR+V+MP+DT+ QV+G G + L KL GP VL+ G+ A+ SA +GHFPWFA +N + +PE D ++L R A IGF +SV SD SNS+ V KV KQA + +TY Q ++++ DGV GL RGLG RL+ANG+QGM F VVWK L++ Sbjct: 22 RALGGGGAGAAAMVTQVCTLMWLRTTMNYQYRYGTSTPAAIKALYKQGGVLRFYRGIGPALLQGPLSRFGDTAANTGILTLLDSYESTRSLPVAVKTVAASGTAALWRVVLMPIDTLKTVMQVEGHDGMTKLRAKLKAGGPRVLYHGSLAALSATFVGHFPWFATFNYLNATIPEAEDKWAKLARRAAIGFCSSVISDTTSNSIRVTKVTKQAHTKPITYVQAVREVISKDGVSGLFFRGLGTRLIANGMQGMMFTVVWKGLEE 285
BLAST of NO20G00710 vs. NCBI_GenBank
Match: CEM36155.1 (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 261.5 bits (667), Expect = 4.500e-66 Identity = 133/270 (49.26%), Postives = 173/270 (64.07%), Query Frame = 0 Query: 159 RTISGGVSGAIAMGINVAAFMWLRTIMSYQQAHGTPLAKTVGVLYRQGGVRRFYRGLIPALIHAPASRFGDTAGNAGMLAWLDRHAETQNLPIVFKTAAGSVASALWRIVIMPLDTIIICQQVQGDPGWSSLYRKLIRKGPSVLFQGAGASFSANVLGHFPWFAIYNLCESKLP--EPSDMKSRLFRNAFIGFAASVASDILSNSLTVIKVCKQASVELLTYRQTTEQILATDGVKGLLGRGLGLRLMANGVQGMAFGVVWKYLDDCIFR 427 R + GG+SG+ A + V + MWLRT M+YQ G PL T+ L+ +GGV RFYRGL AL+ AP S+FGDTA NAG+LA LD T LP+ KTA+ SVA+ LWRIVI P+DT QV+G G + K+ GP+VL+ GA A+ +A +GH+PWF YN + LP EP D +L RNAFIG AS +D LSNSL VIK KQ S + +YR+ I+ DGV+GL GRGL RL+ NGVQGM F V +++ ++ F+ Sbjct: 70 RAVGGGLSGSAASVLQVFSLMWLRTSMNYQYTTGLPLNTTLATLWSEGGVPRFYRGLPFALVQAPLSKFGDTAANAGVLALLDSFESTMGLPLFVKTASASVAAGLWRIVIFPVDTFKTTMQVRGAAGIPQVSDKVKETGPTVLYNGAIAASAATFVGHYPWFFTYNYLQEHLPPVEPGDTLMKLMRNAFIGLCASSLADSLSNSLRVIKTTKQTSEDSPSYREVVSGIIEKDGVRGLFGRGLATRLLTNGVQGMLFAVAYRFFEEQFFK 339
BLAST of NO20G00710 vs. NCBI_GenBank
Match: OSX75515.1 (hypothetical protein BU14_0234s0041 [Porphyra umbilicalis]) HSP 1 Score: 261.2 bits (666), Expect = 5.800e-66 Identity = 128/266 (48.12%), Postives = 172/266 (64.66%), Query Frame = 0 Query: 158 GRTISGGVSGAIAMGINVAAFMWLRTIMSYQQAHGTPLAKTVGVLYRQGGVRRFYRGLIPALIHAPASRFGDTAGNAGMLAWLDRHAETQNLPIVFKTAAGSVASALWRIVIMPLDTIIICQQVQGDPGWSSLYRKL-IRKGPSVLFQGAGASFSANVLGHFPWFAIYNLCESKLPEPSDMKSRLFRNAFIGFAASVASDILSNSLTVIKVCKQASVELLTYRQTTEQILATDGVKGLLGRGLGLRLMANGVQGMAFGVVWKYLDD 423 G+ + GG+ GA AMGI V +WLRT M+YQ HG + LY +GGVRRFYRG PAL+ AP SRFGDTA NAG+++ LD + T +LP++ KT+A S A+A +RI +MP+D + QV G G L K G V + GA + +A +GHFPWF++YN + LP P D+ S+L RNA IGF+ASV SD SNSL V+K +Q E+++Y Q++A DGV GL GRGL R++ANG QG+ F V+WK L++ Sbjct: 69 GKALRGGLPGAAAMGIQVTTLLWLRTTMNYQYRHGLSTGAALRTLYAEGGVRRFYRGFAPALVQAPMSRFGDTAANAGVISLLDSYEATASLPVIAKTSAASAAAAGFRIFLMPVDAVKTSLQVNGASGLRLLLTKARAGGGVPVFYHGALGAAAATYVGHFPWFSVYNTLNAALPVPEDLPSKLGRNAVIGFSASVVSDCCSNSLRVVKTYRQTHAEVVSYPSAVRQVVAQDGVAGLFGRGLQTRILANGFQGLLFTVLWKLLEE 334
BLAST of NO20G00710 vs. NCBI_GenBank
Match: KDD75437.1 (hypothetical protein H632_c685p1 [Helicosporidium sp. ATCC 50920]) HSP 1 Score: 258.8 bits (660), Expect = 2.900e-65 Identity = 124/264 (46.97%), Postives = 174/264 (65.91%), Query Frame = 0 Query: 159 RTISGGVSGAIAMGINVAAFMWLRTIMSYQQAHGTPLAKTVGVLYRQGGVRRFYRGLIPALIHAPASRFGDTAGNAGMLAWLDRHAETQNLPIVFKTAAGSVASALWRIVIMPLDTIIICQQVQGDPGWSSLYRKLIRKGPSVLFQGAGASFSANVLGHFPWFAIYNLCESKLPEPSDMKSRLFRNAFIGFAASVASDILSNSLTVIKVCKQASVELLTYRQTTEQILATDGVKGLLGRGLGLRLMANGVQGMAFGVVWKYLDD 423 R + GGV GA AMGI V + MWLRT ++YQ +GT + LY++GGV RFYRGL PAL+ P SRFGDTA NAG+L L+ H+ T+++PI KTAA S A+ +RI +MP+D + QV+G G+ L K+ GPSVL+ GA A+ +A GH+PWF YN +++LP ++ +L R+A IGF+AS SD +SNS+ V+K KQ + +TY Q ++ DGV GL+GRGL +++ANG+QG+ F V+W+ D Sbjct: 70 RALGGGVPGAAAMGIQVLSLMWLRTTVNYQYRYGTTTTVALKTLYKEGGVVRFYRGLGPALVQGPLSRFGDTAANAGVLTLLNEHSSTRDMPIALKTAAASAAAGGFRIFLMPVDAMKTIMQVEGKGGFGKLAAKVRVGGPSVLYHGAIAAAAATWAGHYPWFFTYNYLDAQLPRYDELHKKLLRSAVIGFSASAISDTISNSIRVVKTTKQTATTPMTYPQVVRMVVKEDGVLGLMGRGLKTKILANGLQGLLFSVLWRIGQD 333
BLAST of NO20G00710 vs. NCBI_GenBank
Match: PSC76543.1 (mitochondrial carrier [Micractinium conductrix]) HSP 1 Score: 257.7 bits (657), Expect = 6.500e-65 Identity = 127/264 (48.11%), Postives = 175/264 (66.29%), Query Frame = 0 Query: 159 RTISGGVSGAIAMGINVAAFMWLRTIMSYQQAHGTPLAKTVGVLYRQGGVRRFYRGLIPALIHAPASRFGDTAGNAGMLAWLDRHAETQNLPIVFKTAAGSVASALWRIVIMPLDTIIICQQVQGDPGWSSLYRKLIRKGPSVLFQGAGASFSANVLGHFPWFAIYNLCESKLPEPSDMKSRLFRNAFIGFAASVASDILSNSLTVIKVCKQASVELLTYRQTTEQILATDGVKGLLGRGLGLRLMANGVQGMAFGVVWKYLDD 423 R + GG+ GA AMG+ V + MWLRT ++YQ +GT +++ + LY+ GGV RFYRGL PAL+ P SRFGDTA NAGMLA L E +LP+ KT A S A+A +RIV+MP+D QV+G G+S L K+ GP+VL+ GA A+ +A +GH+PWF +YN LP+ D+ RL R+AFIGF AS SD SNS+ V+K KQ + L+Y + ++++A DGV GL GRGL +++ANG+QG+ F V+W+ D Sbjct: 497 RALGGGIPGAAAMGVQVLSLMWLRTTVNYQYRYGTSMSQALKHLYKDGGVVRFYRGLGPALLQGPLSRFGDTAANAGMLALL----EGVDLPVALKTVAASGAAAAFRIVLMPVDAAKTIMQVEGKGGFSKLLAKVRVGGPTVLYHGALAASAATFVGHYPWFFVYNSLNESLPQYDDLPKRLLRSAFIGFCASAVSDTCSNSIRVVKTTKQTATVPLSYPEAVKEVVAKDGVVGLFGRGLKTKIVANGLQGLMFSVLWRMGQD 756 The following BLAST results are available for this feature:
BLAST of NO20G00710 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO20G00710 ID=NO20G00710|Name=NO20G00710|organism=Nannochloropsis oceanica|type=gene|length=1654bpback to top protein sequence of NO20G00710.1 >NO20G00710.1-protein ID=NO20G00710.1-protein|Name=NO20G00710.1|organism=Nannochloropsis oceanica|type=polypeptide|length=430bpback to top Synonyms
Publications
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