NO20G00370, NO20G00370 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of NO20G00370 vs. NCBI_GenBank
Match: EWM22152.1 (hypothetical protein Naga_100064g16 [Nannochloropsis gaditana]) HSP 1 Score: 436.8 bits (1122), Expect = 9.000e-119 Identity = 240/516 (46.51%), Postives = 293/516 (56.78%), Query Frame = 0 Query: 10 PIASYRYRC-CRPLPSRGELCGGTGTSR----NIQVTWLQPYHRTIFEYFWRPKPVSSLPLSSGNKEDGPS----------SSTPSPPHVHHDLYDKQTLWGAKTGVGSKMPFPPQATNSLLDKLEKAHLCTEHLLHFTSR--HRRYT------SSSSSGHTALSTFPFLEELVDEHWKFRLKRSPSSLPQAGLGLFLTRGTIKAGDVITCYPGLMYRIPYDLEICMPMDEVSFTPCPPSFLLKNDYLLRFHHADTNQHLLLDGCPRGISALNFISANQQRGRPWANMEWLESNSHACGRKGLLDSHLHPSEGMGEG-------GGGMAEEQCVGEGGEYVRVPTVYDTSKYFAAKLGLGNMTRTPFGLRQKREGITWRRNQSFFTDAPGHGVDEKMQSCHEPEHVRGEGDXXXXXXXXXXXXXXXXXXHRFNDSRAPGSYNAEFHLCELPRDLPPHLLRFVPNLHFSDSLGDRRYCVLVTAAQDLEVPVGGPPLELFVPYASPFGGVCKHGFPLL 496 P+AS + C P + L G + S+ N++V + RTIF+Y W PK SL +G + G TGVGS+MPFPP+A +SLL++LEKAH+CTE LL S+ H + T SS + L + P LE+L+DEHW FRL+R PS+LP AG+GLFL +G + AG+VITC+PGL+YRIPYDLE CMPMDEVSF+PCPP FL+KNDYLLRF+H TNQHLLLDGCP+GISALNFI+ANQ+RGRPWANMEWLES+ C R+G G GEG GG M C+GEGGE V +P D+SKYF AKLGLG H ND +P YNAEFHLCELP DLPPHLLRF+PNLHF+ +G R +CVLVTA+++LEVP G PP+E++VPYAS F VCKHGFPLL Sbjct: 9 PLASVSWLSRCYPHTIQPALIGNSIDSKRWTWNLKVLQWKSSQRTIFQYLWPPKSGPSLSHPAGKTDSGSQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTGVGSRMPFPPKAEDSLLERLEKAHMCTERLLQRKSQLLHTKSTVTFPSSSSREAPSKRLGSCPVLEDLLDEHWTFRLERRPSTLPGAGMGLFLVQGRVHAGEVITCHPGLVYRIPYDLEACMPMDEVSFSPCPPPFLVKNDYLLRFYHPVTNQHLLLDGCPQGISALNFIAANQRRGRPWANMEWLESSPFGCRRRGPEREEGLVEGGWGEGRKDRGRPGGPMQGTSCLGEGGEEVLLPREMDSSKYFTAKLGLG---------------------------------------------------------------------HLVNDPHSPEKYNAEFHLCELPSDLPPHLLRFIPNLHFAQGIGSRHFCVLVTASKNLEVPQGAPPVEIYVPYASSFTEVCKHGFPLL 455
BLAST of NO20G00370 vs. NCBI_GenBank
Match: EWM22151.1 (hypothetical protein Naga_100064g16 [Nannochloropsis gaditana]) HSP 1 Score: 335.5 bits (859), Expect = 2.800e-88 Identity = 183/373 (49.06%), Postives = 228/373 (61.13%), Query Frame = 0 Query: 10 PIASYRYRC-CRPLPSRGELCGGTGTSR----NIQVTWLQPYHRTIFEYFWRPKPVSSLPLSSGNKEDGPS----------SSTPSPPHVHHDLYDKQTLWGAKTGVGSKMPFPPQATNSLLDKLEKAHLCTEHLLHFTSR--HRRYT------SSSSSGHTALSTFPFLEELVDEHWKFRLKRSPSSLPQAGLGLFLTRGTIKAGDVITCYPGLMYRIPYDLEICMPMDEVSFTPCPPSFLLKNDYLLRFHHADTNQHLLLDGCPRGISALNFISANQQRGRPWANMEWLESNSHACGRKGLLDSHLHPSEGMGEG-------GGGMAEEQCVGEGGEYVRVPTVYDTSKYFAAKLGLGNMTRTPFGLRQKR 353 P+AS + C P + L G + S+ N++V + RTIF+Y W PK SL +G + G TGVGS+MPFPP+A +SLL++LEKAH+CTE LL S+ H + T SS + L + P LE+L+DEHW FRL+R PS+LP AG+GLFL +G + AG+VITC+PGL+YRIPYDLE CMPMDEVSF+PCPP FL+KNDYLLRF+H TNQHLLLDGCP+GISALNFI+ANQ+RGRPWANMEWLES+ C R+G G GEG GG M C+GEGGE V +P D+SKYF AKLGLG++ P G +R Sbjct: 9 PLASVSWLSRCYPHTIQPALIGNSIDSKRWTWNLKVLQWKSSQRTIFQYLWPPKSGPSLSHPAGKTDSGSQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTGVGSRMPFPPKAEDSLLERLEKAHMCTERLLQRKSQLLHTKSTVTFPSSSSREAPSKRLGSCPVLEDLLDEHWTFRLERRPSTLPGAGMGLFLVQGRVHAGEVITCHPGLVYRIPYDLEACMPMDEVSFSPCPPPFLVKNDYLLRFYHPVTNQHLLLDGCPQGISALNFIAANQRRGRPWANMEWLESSPFGCRRRGPEREEGLVEGGWGEGRKDRGRPGGPMQGTSCLGEGGEEVLLPREMDSSKYFTAKLGLGHLAHAPRGRHSER 381
BLAST of NO20G00370 vs. NCBI_GenBank
Match: PSC76244.1 (hypothetical protein C2E20_0376 [Micractinium conductrix]) HSP 1 Score: 84.0 bits (206), Expect = 1.500e-12 Identity = 83/330 (25.15%), Postives = 116/330 (35.15%), Query Frame = 0 Query: 163 HWKFRLKRSPSSLPQAGLGLFLTRGT-IKAGDVITCYPGLMY-------RIPYDLEICMPMDEVSFTPCPPSFLLKNDYLLRFHHADTNQHLLLDGCPRGISALNFISANQQRGRPWANMEWLESNSHACGRKGLLDSHLHPSEGMGEGGGGMAEEQCVGEGGEYVRVPTVYDTSKYFAAKLGLGNMTRTPFGLRQKREGITWRRNQSFFTDAPGHGVDEKMQSCHEPEHVRGEGDXXXXXXXXXXXXXXXXXXHRFNDSRAPGSYNAEFHLCELPRDLPPHLLRFVPNLHFSDSLGD--RRYCVLVTAAQDLEVPVGGPPLELFVPYAS 483 H RL +PS++P+AG G+FL G+ + GD++T YPGL + I + +P + F P PP+F+ N Y+L+ A + L+DG P G+SA F +A G P N WL+ H + K LG++ HG P S + LC LP DLPP LLR++P L D+ R+ V+VTAA +L VP GGPPLEL Y + Sbjct: 23 HPAARLAVAPSTIPEAGRGVFLQPGSAARRGDILTLYPGLAHDMQAVQAGIQDAMAASIPAADECFAPAPPAFMAYNQYMLQRRCA--GRAFLIDGRPNGLSAQRFAAAAAVDGLP-VNAAWLD-EMHG-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHLLRKTALGHLI--------------------------NHG--------------------------------------------TPAS--VTYELCPLPADLPPSLLRWLPTLEAGDASASPGLRWAVVVTAAAELHVPAGGPPLELLADYGA 275
BLAST of NO20G00370 vs. NCBI_GenBank
Match: XP_005854601.1 (hypothetical protein NGA_0209800, partial [Nannochloropsis gaditana CCMP526] >EKU21753.1 hypothetical protein NGA_0209800, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 78.6 bits (192), Expect = 6.200e-11 Identity = 56/151 (37.09%), Postives = 79/151 (52.32%), Query Frame = 0 Query: 172 PSSLPQAGLGLFL-TRGTIKAGDVITCYPGLMYRIPYDLEICMPMDEVSFTPCPPSFLLKNDYLLRFHHADTNQHLLLDGCPRGISALNF--ISANQ-QRGRPWANMEWLESNSHACGRKGLLDSHLHPSEGMGEGGGGMAEEQCVGEGGE 319 PSS+P AG GL+L + GD++T YPGL+Y +P+DL MP ++ +F PP F++ N +LLR + +++ L DG P G+SA F IS Q +R N WLE EG E GGG A+E+ GG+ Sbjct: 121 PSSIPNAGRGLWLKPYQNVAKGDILTLYPGLIYELPHDLAALMPSED-AFAFAPPDFMIGNAFLLRV--SVSSRDFLCDGRPFGLSAHMFRAISRRQHERLGLQVNDAWLEGE----------------GEGGKENGGGTAKERGAEGGGK 252
BLAST of NO20G00370 vs. NCBI_GenBank
Match: EWM23845.1 (hypothetical protein Naga_100273g2 [Nannochloropsis gaditana]) HSP 1 Score: 78.6 bits (192), Expect = 6.200e-11 Identity = 62/176 (35.23%), Postives = 88/176 (50.00%), Query Frame = 0 Query: 147 HTALSTFPFLEELVDEHWKFRLKRSPSSLPQAGLGLFL-TRGTIKAGDVITCYPGLMYRIPYDLEICMPMDEVSFTPCPPSFLLKNDYLLRFHHADTNQHLLLDGCPRGISALNF--ISANQ-QRGRPWANMEWLESNSHACGRKGLLDSHLHPSEGMGEGGGGMAEEQCVGEGGE 319 HT+L +F L+ L PSS+P AG GL+L T+ GD++T YPGL+Y +P+DL MP ++ +F PP F++ N +LLR + +++ L DG P G+SA F IS Q +R N WLE EG E G G A+E+ GG+ Sbjct: 122 HTSLPSFSSATPLLP---PTLLDVRPSSIPNAGRGLWLKPYQTVAKGDILTLYPGLIYELPHDLAALMPSED-AFAFAPPDFMIGNAFLLRV--SVSSRDFLCDGRPFGLSAHMFRAISRRQHERLGLQVNDAWLEGE----------------GEGGKENGKGTAKEKGAEGGGK 275
BLAST of NO20G00370 vs. NCBI_GenBank
Match: XP_005851253.1 (hypothetical protein CHLNCDRAFT_49994 [Chlorella variabilis] >EFN59151.1 hypothetical protein CHLNCDRAFT_49994 [Chlorella variabilis]) HSP 1 Score: 70.1 bits (170), Expect = 2.200e-8 Identity = 47/130 (36.15%), Postives = 70/130 (53.85%), Query Frame = 0 Query: 156 LEELVDEHWKFRLKRSPSSL--PQAGLGLFLTRGTIKAGDVITCYPGLMYRI-PYDLEICMPMDEVSFTPCPPSFLLKNDYLLRFHHADTNQHLLLDGCPRGISALNF--ISANQQRGRPWA---NMEWL 278 L E + + F L+R PS + P AG G+FLT G AG ++T YPGL++ + + L + + + + P PP++ L N YLL+ N L+DG P G+SA F +A+ G+P A N WL Sbjct: 596 LTEALADTIGFELQRRPSGIQHPDAGDGVFLTAGGCPAGGILTLYPGLVHDMGDFVLLLGVSAPDDACAPAPPAWTLDNHYLLQLR--CLNAACLVDGQPGGLSAQRFQAAAASWAAGQPEAALVNASWL 723 The following BLAST results are available for this feature:
BLAST of NO20G00370 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 6
Relationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO20G00370 ID=NO20G00370|Name=NO20G00370|organism=Nannochloropsis oceanica|type=gene|length=2288bpback to top protein sequence of NO20G00370.1 >NO20G00370.1-protein ID=NO20G00370.1-protein|Name=NO20G00370.1|organism=Nannochloropsis oceanica|type=polypeptide|length=496bpback to top Synonyms
Publications
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