NO19G02720, NO19G02720 (gene) Nannochloropsis oceanica
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Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO19G02720 vs. NCBI_GenBank
Match: EWM27369.1 (caax prenyl protease 2 [Nannochloropsis gaditana]) HSP 1 Score: 185.3 bits (469), Expect = 4.100e-43 Identity = 100/170 (58.82%), Postives = 119/170 (70.00%), Query Frame = 0
Query: 233 MLPLLYQASSSPS---SLDSPRAIPFVKLIFLSPLFFGLAHAHHALQRVREGLPPAQALLEVALQVAYTSIFGWYAAFLFLRTGSLLPCILTHSFCNFVGLPNLAFMLSPSSLTPYPAFAFLLYVHRWKFLAAHLLGIALFVALLFPFSDPKLFTERRLEGERGVPLYWQ 400
MLP+LYQA+SSPS S S + P LI L+PLFFGLAH HHALQR+R+G+P A L V LQ+AYTSIFGW+AAFLFLRTGSLLPC+LTHSFCN +GLPNLAF+ F+L+ HR K L + LGI LF LL+P SDP+ + R EG R PLYW+
Sbjct: 1 MLPILYQAASSPSLSHSRPSSSSPPLGPLILLTPLFFGLAHTHHALQRLRDGVPARIAFLGVCLQIAYTSIFGWHAAFLFLRTGSLLPCVLTHSFCNLMGLPNLAFLXXXXXXXXXXXXXFILHAHRGKILGVYALGIGLFAILLYPCSDPQWY--YREEGPR--PLYWR 166
BLAST of NO19G02720 vs. NCBI_GenBank
Match: EWM22869.1 (major facilitator superfamily [Nannochloropsis gaditana]) HSP 1 Score: 156.4 bits (394), Expect = 2.000e-34 Identity = 76/87 (87.36%), Postives = 82/87 (94.25%), Query Frame = 0
Query: 52 YWRWLSPSVPLIGQGLAYSAFAAVLWPSVPFTVPEDRVGVAYGLTTAIQNGGLALFPLLAAAIYKAADSRYLPHVELLFVCLAIVGV 139
YWR LSP+VPL+GQGLAYSAFAAVLWPSVPFTVPEDRVGVAYGLTTAIQN GLALFPL+AAAIYKAA S Y+PHVELLFV LA+VG+
Sbjct: 3 YWRSLSPAVPLVGQGLAYSAFAAVLWPSVPFTVPEDRVGVAYGLTTAIQNAGLALFPLMAAAIYKAAGSEYIPHVELLFVYLAVVGL 89
BLAST of NO19G02720 vs. NCBI_GenBank
Match: XP_009032366.1 (hypothetical protein AURANDRAFT_19189 [Aureococcus anophagefferens] >EGB12715.1 hypothetical protein AURANDRAFT_19189 [Aureococcus anophagefferens]) HSP 1 Score: 130.6 bits (327), Expect = 1.200e-26 Identity = 81/174 (46.55%), Postives = 103/174 (59.20%), Query Frame = 0
Query: 216 RNLVVAPLTEEVVFRACMLPLLYQASSSPSSLDSPRAIPFVKLIFLSPLFFGLAHAHHALQRVREGLPPA-QALLEVALQVAYTSIFGWYAAFLFLRTGSLLPCILTHSFCNFVGLPNLAFMLSPSSLTPY-----PAFAFLLYVHRWKFLAAHLLGIALFVALLFPFSDPKLF 384
RNLVV PL+EE VFRACM+PLL A L + RA + SPLFFG+AH HH +RVR+ P +AL + Q AYT++FG Y AF+F RTG+L H FCN++GLP+L F PS L P+ +L+ HR A H G+ALF ALLFP + P+ F
Sbjct: 4 RNLVVGPLSEEFVFRACMVPLLLDA-----GLGTARA------VCCSPLFFGVAHLHHLRRRVRDDRAPVLEALGQTLFQFAYTTLFGVYTAFVFARTGNLAAAFACHGFCNYMGLPDLDFSCVPSDL-PWLSKREKLVQVVLHKHRTLLFALHGAGMALFGALLFPLTRPEAF 165
BLAST of NO19G02720 vs. NCBI_GenBank
Match: OQR97739.1 (peptidase family U48 [Achlya hypogyna]) HSP 1 Score: 128.6 bits (322), Expect = 4.600e-26 Identity = 75/162 (46.30%), Postives = 96/162 (59.26%), Query Frame = 0
Query: 221 APLTEEVVFRACMLPLLYQASSSPSSLDSPRAIPFVKLIFLSPLFFGLAHAHHALQRVREGLPPAQALLEVALQVAYTSIFGWYAAFLFLRTGSLLPCILTHSFCNFVGLPNLAFMLSPSSLTPYPAFAFLLYVHRWKFLAAHLLGIALFVALLFPFSDPKL 383
APLTEE VFR CM LL A S S ++FLSPL FG+AHAHH + VR G+P +AL V Q+ YT++FG YA FLFLRTG L+ I+ H+FCN +G P+L+F +SP S LY +R L +L+GI F LL+P + P L
Sbjct: 161 APLTEEFVFRGCMAALLLNAGFSVS-----------HIVFLSPLAFGVAHAHHFYEHVRGGMPWMRALAIVVFQLVYTTVFGIYATFLFLRTGQLVAIIVVHAFCNVMGFPDLSF-VSPDS---------DLYTYRHSILGVYLVGIVCFSVLLYPVTAPTL 301
BLAST of NO19G02720 vs. NCBI_GenBank
Match: NP_001094055.1 (CAAX prenyl protease 2 [Rattus norvegicus] >EDM12413.1 Ras and a-factor-converting enzyme 1 homolog (S. cerevisiae), isoform CRA_b [Rattus norvegicus]) HSP 1 Score: 125.9 bits (315), Expect = 3.000e-25 Identity = 76/182 (41.76%), Postives = 103/182 (56.59%), Query Frame = 0
Query: 203 RRIAHRLTKETLWRNLVVAPLTEEVVFRACMLPLLYQASSSPSSLDSPRAIPFVKLIFLSPLFFGLAHAHHALQRVR-EGLPPAQALLEVALQVAYTSIFGWYAAFLFLRTGSLLPCILTHSFCNFVGLPNLAFMLSPSSLTPYPAFAFLLYVHRWKFLAAHLLGIALFVALLFPFSDPKLF 384
R A RLT RN V+APLTEE+VFRACMLP+L +P + P +F PLFFG+AH HH ++++R L A Q +YT++FG Y AFLF+RTG L+ +L HSFCN++G P + A L + +W LA + LG+ LF+ LL P +DPKL+
Sbjct: 153 RSWARRLTDMRWLRNQVIAPLTEELVFRACMLPML-----APCTGLGP-------AVFTCPLFFGVAHFHHIIEQLRFRQSSVGSIFLSAAFQFSYTAVFGAYTAFLFIRTGHLIGPVLCHSFCNYMGFPAVC--------------AALEHPQKWPLLAGYALGVGLFLLLLQPLTDPKLY 308
BLAST of NO19G02720 vs. NCBI_GenBank
Match: AAH87629.1 (Rce1 protein, partial [Rattus norvegicus]) HSP 1 Score: 125.9 bits (315), Expect = 3.000e-25 Identity = 76/182 (41.76%), Postives = 103/182 (56.59%), Query Frame = 0
Query: 203 RRIAHRLTKETLWRNLVVAPLTEEVVFRACMLPLLYQASSSPSSLDSPRAIPFVKLIFLSPLFFGLAHAHHALQRVR-EGLPPAQALLEVALQVAYTSIFGWYAAFLFLRTGSLLPCILTHSFCNFVGLPNLAFMLSPSSLTPYPAFAFLLYVHRWKFLAAHLLGIALFVALLFPFSDPKLF 384
R A RLT RN V+APLTEE+VFRACMLP+L +P + P +F PLFFG+AH HH ++++R L A Q +YT++FG Y AFLF+RTG L+ +L HSFCN++G P + A L + +W LA + LG+ LF+ LL P +DPKL+
Sbjct: 152 RSWARRLTDMRWLRNQVIAPLTEELVFRACMLPML-----APCTGLGP-------AVFTCPLFFGVAHFHHIIEQLRFRQSSVGSIFLSAAFQFSYTAVFGAYTAFLFIRTGHLIGPVLCHSFCNYMGFPAVC--------------AALEHPQKWPLLAGYALGVGLFLLLLQPLTDPKLY 307
BLAST of NO19G02720 vs. NCBI_GenBank
Match: XP_008758358.1 (PREDICTED: CAAX prenyl protease 2 isoform X5 [Rattus norvegicus] >EDM12412.1 Ras and a-factor-converting enzyme 1 homolog (S. cerevisiae), isoform CRA_a [Rattus norvegicus]) HSP 1 Score: 125.9 bits (315), Expect = 3.000e-25 Identity = 76/182 (41.76%), Postives = 103/182 (56.59%), Query Frame = 0
Query: 203 RRIAHRLTKETLWRNLVVAPLTEEVVFRACMLPLLYQASSSPSSLDSPRAIPFVKLIFLSPLFFGLAHAHHALQRVR-EGLPPAQALLEVALQVAYTSIFGWYAAFLFLRTGSLLPCILTHSFCNFVGLPNLAFMLSPSSLTPYPAFAFLLYVHRWKFLAAHLLGIALFVALLFPFSDPKLF 384
R A RLT RN V+APLTEE+VFRACMLP+L +P + P +F PLFFG+AH HH ++++R L A Q +YT++FG Y AFLF+RTG L+ +L HSFCN++G P + A L + +W LA + LG+ LF+ LL P +DPKL+
Sbjct: 49 RSWARRLTDMRWLRNQVIAPLTEELVFRACMLPML-----APCTGLGP-------AVFTCPLFFGVAHFHHIIEQLRFRQSSVGSIFLSAAFQFSYTAVFGAYTAFLFIRTGHLIGPVLCHSFCNYMGFPAVC--------------AALEHPQKWPLLAGYALGVGLFLLLLQPLTDPKLY 204
BLAST of NO19G02720 vs. NCBI_GenBank
Match: XP_008609994.1 (hypothetical protein SDRG_06018 [Saprolegnia diclina VS20] >EQC36572.1 hypothetical protein SDRG_06018 [Saprolegnia diclina VS20]) HSP 1 Score: 125.2 bits (313), Expect = 5.000e-25 Identity = 77/191 (40.31%), Postives = 101/191 (52.88%), Query Frame = 0
Query: 194 STWYDWWERRRIAHRLTKETLW--RNLVVAPLTEEVVFRACMLPLLYQASSSPSSLDSPRAIPFVKLIFLSPLFFGLAHAHHALQRVREGLPPAQALLEVALQVAYTSIFGWYAAFLFLRTGSLLPCILTHSFCNFVGLPNLAFMLSPSSLTPYPAFAFLLYVHRWKFLAAHLLGIALFVALLFPFSDPKL 383
S+W E + H+ E + R + AP TEE VFR+CM PLL A S S +I SPL FG+AH HH ++ VR G+P +ALL V Q+ YT++FG YA FL+LRTG H+FCN +G P+L F+ S LY R+ L +LLGI F LL+P +DP L
Sbjct: 121 SSWSKALEGTSLVHQARYERIQAIRTYLYAPFTEEFVFRSCMAPLLLCAGFSAGS-----------IIVGSPLAFGVAHMHHFVEHVRSGMPWTRALLIVVFQLCYTTVFGIYATFLYLRTGQFCALFAVHAFCNVMGFPDLGFLSIESP----------LYGARYAILGVYLLGILGFSVLLYPLTDPSL 290
BLAST of NO19G02720 vs. NCBI_GenBank
Match: XP_004481627.1 (CAAX prenyl protease 2 isoform X2 [Dasypus novemcinctus]) HSP 1 Score: 124.8 bits (312), Expect = 6.600e-25 Identity = 76/182 (41.76%), Postives = 101/182 (55.49%), Query Frame = 0
Query: 203 RRIAHRLTKETLWRNLVVAPLTEEVVFRACMLPLLYQASSSPSSLDSPRAIPFVKLIFLSPLFFGLAHAHHALQRVR-EGLPPAQALLEVALQVAYTSIFGWYAAFLFLRTGSLLPCILTHSFCNFVGLPNLAFMLSPSSLTPYPAFAFLLYVHRWKFLAAHLLGIALFVALLFPFSDPKLF 384
R AH LT RN V+APLTEE+VFR CMLP+L +P P +F PLFFG+AH HH ++++R L A Q +YT++FG Y AFLF+RTG L+ +L HSFCN++G P + A L + RW LA + LG+ LF+ LL P +DPKL+
Sbjct: 153 RSWAHCLTDMRWLRNQVIAPLTEELVFRGCMLPML-----APCMGLGP-------AVFTCPLFFGVAHFHHIIEQLRFRQSSVGSIFLSAAFQFSYTAVFGAYTAFLFIRTGHLIGPVLCHSFCNYMGFPAVC--------------AALEHPQRWPLLAGYALGVGLFLLLLQPLTDPKLY 308
BLAST of NO19G02720 vs. NCBI_GenBank
Match: XP_006980621.1 (PREDICTED: CAAX prenyl protease 2 isoform X1 [Peromyscus maniculatus bairdii]) HSP 1 Score: 124.8 bits (312), Expect = 6.600e-25 Identity = 75/182 (41.21%), Postives = 103/182 (56.59%), Query Frame = 0
Query: 203 RRIAHRLTKETLWRNLVVAPLTEEVVFRACMLPLLYQASSSPSSLDSPRAIPFVKLIFLSPLFFGLAHAHHALQRVR-EGLPPAQALLEVALQVAYTSIFGWYAAFLFLRTGSLLPCILTHSFCNFVGLPNLAFMLSPSSLTPYPAFAFLLYVHRWKFLAAHLLGIALFVALLFPFSDPKLF 384
R A LT RN V+APLTEE+VFRACMLP+L +P + P +F PLFFG+AH HH ++++R L A Q +YT++FG Y AFLF+RTG L+ +L HSFCN++G P + A L + H+W LA + LG+ LF+ LL P +DP+L+
Sbjct: 150 RSWARCLTDMRWLRNQVIAPLTEELVFRACMLPML-----APCTGLGP-------AVFTCPLFFGVAHFHHIIEQLRFRQSSVGSIFLSAAFQFSYTAVFGAYTAFLFIRTGHLIGPVLCHSFCNYMGFPAVC--------------AALEHPHKWPLLAGYALGVGLFLLLLQPLTDPRLY 305 The following BLAST results are available for this feature:
BLAST of NO19G02720 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO19G02720 ID=NO19G02720|Name=NO19G02720|organism=Nannochloropsis oceanica|type=gene|length=2068bpback to top protein sequence of NO19G02720.1 >NO19G02720.1-protein ID=NO19G02720.1-protein|Name=NO19G02720.1|organism=Nannochloropsis oceanica|type=polypeptide|length=433bpback to top Synonyms
Publications
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