NO19G02720, NO19G02720 (gene) Nannochloropsis oceanica

Overview
NameNO19G02720
Unique NameNO19G02720
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2068
Alignment locationchr19:827444..829511 +

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Properties
Property NameValue
DescriptionCaax prenyl protease 2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr19genomechr19:827444..829511 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
GO:0016020membrane
Vocabulary: INTERPRO
TermDefinition
IPR003675CAAX_protease
Homology
BLAST of NO19G02720 vs. NCBI_GenBank
Match: EWM27369.1 (caax prenyl protease 2 [Nannochloropsis gaditana])

HSP 1 Score: 185.3 bits (469), Expect = 4.100e-43
Identity = 100/170 (58.82%), Postives = 119/170 (70.00%), Query Frame = 0
Query:  233 MLPLLYQASSSPS---SLDSPRAIPFVKLIFLSPLFFGLAHAHHALQRVREGLPPAQALLEVALQVAYTSIFGWYAAFLFLRTGSLLPCILTHSFCNFVGLPNLAFMLSPSSLTPYPAFAFLLYVHRWKFLAAHLLGIALFVALLFPFSDPKLFTERRLEGERGVPLYWQ 400
            MLP+LYQA+SSPS   S  S  + P   LI L+PLFFGLAH HHALQR+R+G+P   A L V LQ+AYTSIFGW+AAFLFLRTGSLLPC+LTHSFCN +GLPNLAF+             F+L+ HR K L  + LGI LF  LL+P SDP+ +   R EG R  PLYW+
Sbjct:    1 MLPILYQAASSPSLSHSRPSSSSPPLGPLILLTPLFFGLAHTHHALQRLRDGVPARIAFLGVCLQIAYTSIFGWHAAFLFLRTGSLLPCVLTHSFCNLMGLPNLAFLXXXXXXXXXXXXXFILHAHRGKILGVYALGIGLFAILLYPCSDPQWY--YREEGPR--PLYWR 166          
BLAST of NO19G02720 vs. NCBI_GenBank
Match: EWM22869.1 (major facilitator superfamily [Nannochloropsis gaditana])

HSP 1 Score: 156.4 bits (394), Expect = 2.000e-34
Identity = 76/87 (87.36%), Postives = 82/87 (94.25%), Query Frame = 0
Query:   52 YWRWLSPSVPLIGQGLAYSAFAAVLWPSVPFTVPEDRVGVAYGLTTAIQNGGLALFPLLAAAIYKAADSRYLPHVELLFVCLAIVGV 139
            YWR LSP+VPL+GQGLAYSAFAAVLWPSVPFTVPEDRVGVAYGLTTAIQN GLALFPL+AAAIYKAA S Y+PHVELLFV LA+VG+
Sbjct:    3 YWRSLSPAVPLVGQGLAYSAFAAVLWPSVPFTVPEDRVGVAYGLTTAIQNAGLALFPLMAAAIYKAAGSEYIPHVELLFVYLAVVGL 89          
BLAST of NO19G02720 vs. NCBI_GenBank
Match: XP_009032366.1 (hypothetical protein AURANDRAFT_19189 [Aureococcus anophagefferens] >EGB12715.1 hypothetical protein AURANDRAFT_19189 [Aureococcus anophagefferens])

HSP 1 Score: 130.6 bits (327), Expect = 1.200e-26
Identity = 81/174 (46.55%), Postives = 103/174 (59.20%), Query Frame = 0
Query:  216 RNLVVAPLTEEVVFRACMLPLLYQASSSPSSLDSPRAIPFVKLIFLSPLFFGLAHAHHALQRVREGLPPA-QALLEVALQVAYTSIFGWYAAFLFLRTGSLLPCILTHSFCNFVGLPNLAFMLSPSSLTPY-----PAFAFLLYVHRWKFLAAHLLGIALFVALLFPFSDPKLF 384
            RNLVV PL+EE VFRACM+PLL  A      L + RA      +  SPLFFG+AH HH  +RVR+   P  +AL +   Q AYT++FG Y AF+F RTG+L      H FCN++GLP+L F   PS L P+          +L+ HR    A H  G+ALF ALLFP + P+ F
Sbjct:    4 RNLVVGPLSEEFVFRACMVPLLLDA-----GLGTARA------VCCSPLFFGVAHLHHLRRRVRDDRAPVLEALGQTLFQFAYTTLFGVYTAFVFARTGNLAAAFACHGFCNYMGLPDLDFSCVPSDL-PWLSKREKLVQVVLHKHRTLLFALHGAGMALFGALLFPLTRPEAF 165          
BLAST of NO19G02720 vs. NCBI_GenBank
Match: OQR97739.1 (peptidase family U48 [Achlya hypogyna])

HSP 1 Score: 128.6 bits (322), Expect = 4.600e-26
Identity = 75/162 (46.30%), Postives = 96/162 (59.26%), Query Frame = 0
Query:  221 APLTEEVVFRACMLPLLYQASSSPSSLDSPRAIPFVKLIFLSPLFFGLAHAHHALQRVREGLPPAQALLEVALQVAYTSIFGWYAAFLFLRTGSLLPCILTHSFCNFVGLPNLAFMLSPSSLTPYPAFAFLLYVHRWKFLAAHLLGIALFVALLFPFSDPKL 383
            APLTEE VFR CM  LL  A  S S            ++FLSPL FG+AHAHH  + VR G+P  +AL  V  Q+ YT++FG YA FLFLRTG L+  I+ H+FCN +G P+L+F +SP S          LY +R   L  +L+GI  F  LL+P + P L
Sbjct:  161 APLTEEFVFRGCMAALLLNAGFSVS-----------HIVFLSPLAFGVAHAHHFYEHVRGGMPWMRALAIVVFQLVYTTVFGIYATFLFLRTGQLVAIIVVHAFCNVMGFPDLSF-VSPDS---------DLYTYRHSILGVYLVGIVCFSVLLYPVTAPTL 301          
BLAST of NO19G02720 vs. NCBI_GenBank
Match: NP_001094055.1 (CAAX prenyl protease 2 [Rattus norvegicus] >EDM12413.1 Ras and a-factor-converting enzyme 1 homolog (S. cerevisiae), isoform CRA_b [Rattus norvegicus])

HSP 1 Score: 125.9 bits (315), Expect = 3.000e-25
Identity = 76/182 (41.76%), Postives = 103/182 (56.59%), Query Frame = 0
Query:  203 RRIAHRLTKETLWRNLVVAPLTEEVVFRACMLPLLYQASSSPSSLDSPRAIPFVKLIFLSPLFFGLAHAHHALQRVR-EGLPPAQALLEVALQVAYTSIFGWYAAFLFLRTGSLLPCILTHSFCNFVGLPNLAFMLSPSSLTPYPAFAFLLYVHRWKFLAAHLLGIALFVALLFPFSDPKLF 384
            R  A RLT     RN V+APLTEE+VFRACMLP+L     +P +   P        +F  PLFFG+AH HH ++++R          L  A Q +YT++FG Y AFLF+RTG L+  +L HSFCN++G P +               A L +  +W  LA + LG+ LF+ LL P +DPKL+
Sbjct:  153 RSWARRLTDMRWLRNQVIAPLTEELVFRACMLPML-----APCTGLGP-------AVFTCPLFFGVAHFHHIIEQLRFRQSSVGSIFLSAAFQFSYTAVFGAYTAFLFIRTGHLIGPVLCHSFCNYMGFPAVC--------------AALEHPQKWPLLAGYALGVGLFLLLLQPLTDPKLY 308          
BLAST of NO19G02720 vs. NCBI_GenBank
Match: AAH87629.1 (Rce1 protein, partial [Rattus norvegicus])

HSP 1 Score: 125.9 bits (315), Expect = 3.000e-25
Identity = 76/182 (41.76%), Postives = 103/182 (56.59%), Query Frame = 0
Query:  203 RRIAHRLTKETLWRNLVVAPLTEEVVFRACMLPLLYQASSSPSSLDSPRAIPFVKLIFLSPLFFGLAHAHHALQRVR-EGLPPAQALLEVALQVAYTSIFGWYAAFLFLRTGSLLPCILTHSFCNFVGLPNLAFMLSPSSLTPYPAFAFLLYVHRWKFLAAHLLGIALFVALLFPFSDPKLF 384
            R  A RLT     RN V+APLTEE+VFRACMLP+L     +P +   P        +F  PLFFG+AH HH ++++R          L  A Q +YT++FG Y AFLF+RTG L+  +L HSFCN++G P +               A L +  +W  LA + LG+ LF+ LL P +DPKL+
Sbjct:  152 RSWARRLTDMRWLRNQVIAPLTEELVFRACMLPML-----APCTGLGP-------AVFTCPLFFGVAHFHHIIEQLRFRQSSVGSIFLSAAFQFSYTAVFGAYTAFLFIRTGHLIGPVLCHSFCNYMGFPAVC--------------AALEHPQKWPLLAGYALGVGLFLLLLQPLTDPKLY 307          
BLAST of NO19G02720 vs. NCBI_GenBank
Match: XP_008758358.1 (PREDICTED: CAAX prenyl protease 2 isoform X5 [Rattus norvegicus] >EDM12412.1 Ras and a-factor-converting enzyme 1 homolog (S. cerevisiae), isoform CRA_a [Rattus norvegicus])

HSP 1 Score: 125.9 bits (315), Expect = 3.000e-25
Identity = 76/182 (41.76%), Postives = 103/182 (56.59%), Query Frame = 0
Query:  203 RRIAHRLTKETLWRNLVVAPLTEEVVFRACMLPLLYQASSSPSSLDSPRAIPFVKLIFLSPLFFGLAHAHHALQRVR-EGLPPAQALLEVALQVAYTSIFGWYAAFLFLRTGSLLPCILTHSFCNFVGLPNLAFMLSPSSLTPYPAFAFLLYVHRWKFLAAHLLGIALFVALLFPFSDPKLF 384
            R  A RLT     RN V+APLTEE+VFRACMLP+L     +P +   P        +F  PLFFG+AH HH ++++R          L  A Q +YT++FG Y AFLF+RTG L+  +L HSFCN++G P +               A L +  +W  LA + LG+ LF+ LL P +DPKL+
Sbjct:   49 RSWARRLTDMRWLRNQVIAPLTEELVFRACMLPML-----APCTGLGP-------AVFTCPLFFGVAHFHHIIEQLRFRQSSVGSIFLSAAFQFSYTAVFGAYTAFLFIRTGHLIGPVLCHSFCNYMGFPAVC--------------AALEHPQKWPLLAGYALGVGLFLLLLQPLTDPKLY 204          
BLAST of NO19G02720 vs. NCBI_GenBank
Match: XP_008609994.1 (hypothetical protein SDRG_06018 [Saprolegnia diclina VS20] >EQC36572.1 hypothetical protein SDRG_06018 [Saprolegnia diclina VS20])

HSP 1 Score: 125.2 bits (313), Expect = 5.000e-25
Identity = 77/191 (40.31%), Postives = 101/191 (52.88%), Query Frame = 0
Query:  194 STWYDWWERRRIAHRLTKETLW--RNLVVAPLTEEVVFRACMLPLLYQASSSPSSLDSPRAIPFVKLIFLSPLFFGLAHAHHALQRVREGLPPAQALLEVALQVAYTSIFGWYAAFLFLRTGSLLPCILTHSFCNFVGLPNLAFMLSPSSLTPYPAFAFLLYVHRWKFLAAHLLGIALFVALLFPFSDPKL 383
            S+W    E   + H+   E +   R  + AP TEE VFR+CM PLL  A  S  S           +I  SPL FG+AH HH ++ VR G+P  +ALL V  Q+ YT++FG YA FL+LRTG        H+FCN +G P+L F+   S           LY  R+  L  +LLGI  F  LL+P +DP L
Sbjct:  121 SSWSKALEGTSLVHQARYERIQAIRTYLYAPFTEEFVFRSCMAPLLLCAGFSAGS-----------IIVGSPLAFGVAHMHHFVEHVRSGMPWTRALLIVVFQLCYTTVFGIYATFLYLRTGQFCALFAVHAFCNVMGFPDLGFLSIESP----------LYGARYAILGVYLLGILGFSVLLYPLTDPSL 290          
BLAST of NO19G02720 vs. NCBI_GenBank
Match: XP_004481627.1 (CAAX prenyl protease 2 isoform X2 [Dasypus novemcinctus])

HSP 1 Score: 124.8 bits (312), Expect = 6.600e-25
Identity = 76/182 (41.76%), Postives = 101/182 (55.49%), Query Frame = 0
Query:  203 RRIAHRLTKETLWRNLVVAPLTEEVVFRACMLPLLYQASSSPSSLDSPRAIPFVKLIFLSPLFFGLAHAHHALQRVR-EGLPPAQALLEVALQVAYTSIFGWYAAFLFLRTGSLLPCILTHSFCNFVGLPNLAFMLSPSSLTPYPAFAFLLYVHRWKFLAAHLLGIALFVALLFPFSDPKLF 384
            R  AH LT     RN V+APLTEE+VFR CMLP+L     +P     P        +F  PLFFG+AH HH ++++R          L  A Q +YT++FG Y AFLF+RTG L+  +L HSFCN++G P +               A L +  RW  LA + LG+ LF+ LL P +DPKL+
Sbjct:  153 RSWAHCLTDMRWLRNQVIAPLTEELVFRGCMLPML-----APCMGLGP-------AVFTCPLFFGVAHFHHIIEQLRFRQSSVGSIFLSAAFQFSYTAVFGAYTAFLFIRTGHLIGPVLCHSFCNYMGFPAVC--------------AALEHPQRWPLLAGYALGVGLFLLLLQPLTDPKLY 308          
BLAST of NO19G02720 vs. NCBI_GenBank
Match: XP_006980621.1 (PREDICTED: CAAX prenyl protease 2 isoform X1 [Peromyscus maniculatus bairdii])

HSP 1 Score: 124.8 bits (312), Expect = 6.600e-25
Identity = 75/182 (41.21%), Postives = 103/182 (56.59%), Query Frame = 0
Query:  203 RRIAHRLTKETLWRNLVVAPLTEEVVFRACMLPLLYQASSSPSSLDSPRAIPFVKLIFLSPLFFGLAHAHHALQRVR-EGLPPAQALLEVALQVAYTSIFGWYAAFLFLRTGSLLPCILTHSFCNFVGLPNLAFMLSPSSLTPYPAFAFLLYVHRWKFLAAHLLGIALFVALLFPFSDPKLF 384
            R  A  LT     RN V+APLTEE+VFRACMLP+L     +P +   P        +F  PLFFG+AH HH ++++R          L  A Q +YT++FG Y AFLF+RTG L+  +L HSFCN++G P +               A L + H+W  LA + LG+ LF+ LL P +DP+L+
Sbjct:  150 RSWARCLTDMRWLRNQVIAPLTEELVFRACMLPML-----APCTGLGP-------AVFTCPLFFGVAHFHHIIEQLRFRQSSVGSIFLSAAFQFSYTAVFGAYTAFLFIRTGHLIGPVLCHSFCNYMGFPAVC--------------AALEHPHKWPLLAGYALGVGLFLLLLQPLTDPRLY 305          
The following BLAST results are available for this feature:
BLAST of NO19G02720 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM27369.14.100e-4358.82caax prenyl protease 2 [Nannochloropsis gaditana][more]
EWM22869.12.000e-3487.36major facilitator superfamily [Nannochloropsis gad... [more]
XP_009032366.11.200e-2646.55hypothetical protein AURANDRAFT_19189 [Aureococcus... [more]
OQR97739.14.600e-2646.30peptidase family U48 [Achlya hypogyna][more]
NP_001094055.13.000e-2541.76CAAX prenyl protease 2 [Rattus norvegicus] >EDM124... [more]
AAH87629.13.000e-2541.76Rce1 protein, partial [Rattus norvegicus][more]
XP_008758358.13.000e-2541.76PREDICTED: CAAX prenyl protease 2 isoform X5 [Ratt... [more]
XP_008609994.15.000e-2540.31hypothetical protein SDRG_06018 [Saprolegnia dicli... [more]
XP_004481627.16.600e-2541.76CAAX prenyl protease 2 isoform X2 [Dasypus novemci... [more]
XP_006980621.16.600e-2541.21PREDICTED: CAAX prenyl protease 2 isoform X1 [Pero... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniR099ncniR099Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO19G02720.1NO19G02720.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|411143gene_10944Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO19G02720.1NO19G02720.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO19G02720 ID=NO19G02720|Name=NO19G02720|organism=Nannochloropsis oceanica|type=gene|length=2068bp
ATGTCAAATGCGACAACAACAGAACTTCCCGAGGAAGGGAAGGGGAGGGA
GGGAGGAAGGAAGCGGGATGAAGGCCCATGTCGTGGTACCGGCACGCTGC
CAACCATCGTATTAAAAGGCCTGCCTTTCGATGAGGAGAGGAGCAGGCAA
Ggtacacatctcacatacacatgtaccatatgtatcttacctacatgtat
cgcacatttcactcatatacccggcatctcacatgtacgtagcatatctc
acacacacactatataaatgtcttccacacacatattacatctggcactc
gtacataataaagCATACTGGCGTTGGCTTTCCCCTTCGGTGCCTCTCAT
CGGACAAGGCCTAGCTTACAGgtaagcgacctctctgccgcttttccctt
tgatgctctacgtatttccaacactcttctctcttcccctactcccctcc
ctcagCGCCTTCGCGGCGGTTCTCTGGCCCTCCGTCCCTTTCACAGTCCC
CGAGGATCGGGTCGGGGTGGCGTACGGCCTCACCACCGCCATTCAAAATG
GAGGCCTGGCCCTCTTTCCTCTCTTGGCGGCGGCTATCTACAAGgtagga
ggaatggggaaggagtaagggtgggaatgccgacggggattagggataaa
cgcactgctgtaatttgctaaatttgctttctcccactcttttcccgctt
tttaacttccaatcctccctccctttttcgctcagGCCGCCGATTCTCGC
TACCTTCCTCATGTGGAGCTTTTGTTTGTGTGCTTGGCTATAGTGGGCGT
CTTCTCCCTGTCCTGTCCTTTCCCCTTCCTCCTCTCATCCCTATCTGCTT
ACCTCCCTCCTGTTCGTCTCTCAGAGAGCTACTACGATCGTTGGTATGAG
GTAGTGATGCACCTATCCTCTTCTCCCCTCCTCTTTCGGCTGCGTCGTCG
TCGTATCCCCCTGCCCTCGACCTGGTACGACTGGTGGGAGAGAAGGAGAA
TCGCGCACAGGCTGACCAAGGAAACGCTATGGAGAAACCTGGTGGTGGCG
CCACTGACGGAGgtagggcatgggagggtcaacacaaagggacagaaatt
tgagaacttcattccatccatcgcccggcctcgacttgaacctatctgcc
ttcttttttcaaggtcccttcttccctccctccttccgcttacagGAAGT
CGTATTCCGTGCCTGCATGCTCCCTCTCCTTTACCAAGCTTCCTCCTCCC
CTTCCTCCCTGGATTCCCCCCGAGCTATCCCTTTCGTGAAACTGATCTTC
TTGTCACCCCTTTTTTTTGGTCTGGCGCACGCCCACCACGCCCTGCAGCG
GGTGCGAGAAGGATTGCCGgtaggggacgagggaaggcgggatgaaggag
gcaaatcctaaaagagagagcacctatgaagagctgaggcaaaagagcgt
gaggttcatgaaattctgtttttctccccttcgctctcctcgtttgcctc
acagCCCGCACAGGCCCTCCTCGAAGTAGCGTTGCAAGTTGCCTACACCA
GCATCTTCGGCTGGTATGCAGgtaagggcatgttgggggccggagggata
gagagaaagttaggaaagaggacgccttcaacttttccccattctcgatt
atatattcagttacctctctttttccactctccagCGTTCCTTTTCCTCC
GCACCGGCTCTCTCCTGCCCTGCATCCTAACCCACTCCTTCTGCAACTTT
GTGGGCCTCCCAAACCTGGCCTTTATGCTTTCACCCTCCTCTCTTACGCC
CTATCCTGCCTTCGCCTTCCTCCTGTACGTGCATCGATGGAAGTTTCTCG
CTGCTCACCTTCTAGGGATCGCCCTTTTTGTCGCACTTTTGTTCCCATTC
TCGGATCCGAAGCTGTTCACCGAGAGAAGATTAGAGGGGGAAAGAGGTGT
GCCATTATACTGGCAATTAGAACGGCAAAAAAGGCATGCGAGGGCGAGGG
GGTTGTGGATAAATTCGTCCTTGAAAGGGAGCTCTGGAGGAATTAATCAA
AGTAAAGAAATGAAATGA
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protein sequence of NO19G02720.1

>NO19G02720.1-protein ID=NO19G02720.1-protein|Name=NO19G02720.1|organism=Nannochloropsis oceanica|type=polypeptide|length=433bp
MSNATTTELPEEGKGREGGRKRDEGPCRGTGTLPTIVLKGLPFDEERSRQ
AYWRWLSPSVPLIGQGLAYSAFAAVLWPSVPFTVPEDRVGVAYGLTTAIQ
NGGLALFPLLAAAIYKAADSRYLPHVELLFVCLAIVGVFSLSCPFPFLLS
SLSAYLPPVRLSESYYDRWYEVVMHLSSSPLLFRLRRRRIPLPSTWYDWW
ERRRIAHRLTKETLWRNLVVAPLTEEVVFRACMLPLLYQASSSPSSLDSP
RAIPFVKLIFLSPLFFGLAHAHHALQRVREGLPPAQALLEVALQVAYTSI
FGWYAAFLFLRTGSLLPCILTHSFCNFVGLPNLAFMLSPSSLTPYPAFAF
LLYVHRWKFLAAHLLGIALFVALLFPFSDPKLFTERRLEGERGVPLYWQL
ERQKRHARARGLWINSSLKGSSGGINQSKEMK*
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Synonyms
Publications