NO19G02670, NO19G02670 (gene) Nannochloropsis oceanica

Overview
NameNO19G02670
Unique NameNO19G02670
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1734
Alignment locationchr19:802555..804288 -

Link to JBrowse

Properties
Property NameValue
DescriptionCellulase 2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr19genomechr19:802555..804288 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0016798hydrolase activity, acting on glycosyl bonds
GO:0016787hydrolase activity
GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
GO:0008152metabolic process
GO:0005975carbohydrate metabolic process
Vocabulary: INTERPRO
TermDefinition
IPR017853Glycoside_hydrolase_SF
IPR001547Glyco_hydro_5
Homology
BLAST of NO19G02670 vs. NCBI_GenBank
Match: EWM26490.1 (cellulase 2 [Nannochloropsis gaditana])

HSP 1 Score: 277.7 bits (709), Expect = 6.000e-71
Identity = 158/416 (37.98%), Postives = 231/416 (55.53%), Query Frame = 0
Query:   25 SDFASLATPITACLLLRGLSWTTEQGAILLNSRHHFHMKGLTWFGMDTADTRAPHGLWATTLDDVLDFLALNKFNVLRLPVAYTIACDLALRVPSSAISSDSSLHGLNVGKLLDSIFERAAARGILVVLALY--NDDATTLFGSQDQGLWYGSKASYQNFQNAWRRLLTRYGDRWNLLGVDLLDRPGRGRATWAENNPSTDWNLAAQDTAAILIQEYPQYHGLWFIQGIEGGEFAAQ--------YATDLRGALTQSLDLFTPASTKRVVYEVLLMGPS--VSPSMGYVYTTSFPDQMYAAYDDLFGGVEEATGRAVVVGKWGGSLDDAQQGDAMWQKAVADYFIDRCLDDTIYWALNPNAKDTGGVLSADWRTPNEAKLALLARIQPRPSVLLRNAEPEGGWSFMPGSSANPICN 429
            S  + ++TP   C  +  L WT+E G ILLN +  FH+KG+++FG +T +   PHGLW+ T D +  FL    FN +RLP +  +A +   +V ++ I  +  LH L   +L+ +I ++AA  GIL++L ++  N+D           LWY  K S  + + AW  LLT +GDRWNL  +DL + P  G ATW     +TDWN AA++ A  L +++PQY GL F++G +               +  DL G     +DL + A  KR+VY   + GP   V P   Y    +FPD M   +   +  VEE T RAVVVG+WGG  ++    D +WQ + A + +D CL+DT YW LNPN+ DTGG+L  D+ TP   KLALLA++QP P+ +      +  +   PG+ ANP C+
Sbjct:   53 SGSSKVSTPADLC--VASLDWTSEGGEILLNGQ-PFHLKGVSYFGFETPN-EVPHGLWSVTRDQIFGFLRNESFNAVRLPFSTALALEPNKKVNANTI--EKELHDLTALELIGNIIDKAAEYGILIMLDMHRLNEDFI-------PELWYDDKYSMDDVKEAWDNLLTAFGDRWNLFAIDLKNEP-HGVATWGSGKATTDWNTAAEELATYLYKKHPQYKGLVFVEGTQLASAKHHKLDKNNKWWGGDLEGVQEFPIDLGSDALNKRLVYSPHVYGPDAFVQP---YFEAKNFPDNMPDIWKKQWAFVEEQTDRAVVVGEWGGRYENQ---DKIWQDSFAKFLVDECLEDTFYWCLNPNSGDTGGLLDYDFLTPMPKKLALLAKVQPHPTFITVKGSDQ--YCISPGAYANPKCD 446          
BLAST of NO19G02670 vs. NCBI_GenBank
Match: EWM26893.1 (cellulase 2 [Nannochloropsis gaditana])

HSP 1 Score: 229.2 bits (583), Expect = 2.500e-56
Identity = 131/387 (33.85%), Postives = 197/387 (50.90%), Query Frame = 0
Query:   43 LSWTTEQGAILLNSRHHFHMKGLTWFGMDTADTRAPHGLWATTLDDVLDFLALNKFNVLRLPVAYTIACDLALRVPSSAISSDSSLHGLNVGKLLDSIFERAAARGILVVLALYNDDATTLFGSQDQGLWYGSKASYQNFQNAWRRLLTRYGDRWNLLGVDLLDRPGRGRATWAENNPSTDWNLAAQDTAAILIQEYPQYHGLWFIQGIEGGEFAAQYATDLRGALTQSLDLFTPASTKRVVYEVLLMGPSVSPSMGYVYTTSFPDQMYAAYDDLFGGVEEATGRAVVVGKWGGSLDDAQQG-DAMWQKAVADYFIDRCLDDTIYWALNPNAKDTGGVLSADWRTPNEAKLALLARIQPRPSVLLRNAEPEGGWSFMPGSSANPICN 429
            L+WT     + +N +  FH+KGL+WFG++  D+    GL    LD++L FL  N FN +R+P +   A D    V       D  ++ L+  + L+   ERAA   ILV+L     D+  L   +   LWY  + + ++   AW  LL      WNL  +DL + P  G ATW   N +TDWN AA+     L+ ++P++ GL F++G+        Y+ +     T  +D   P   +R+VY     GPSV+  + +    +FP    + ++  +G +EE TG A V+G+WGG  D      D +WQ   A Y +++C+ D   W LNP + DTGGVL A+W    E KLAL   +QP PS L +  +    +   PG  ANP C+
Sbjct:   67 LTWTGTNKELRVNGK-TFHLKGLSWFGLEVGDSNMLLGLNNRGLDEILQFLVDNNFNAIRVPFSTKWALDYDTGV--RGYFRDGDINQLSRRQFLNKFIERAADFKILVML-----DSHRLNDQEIPELWYSQEYTQEDMLAAWDILLGDLKHHWNLFAIDLKNEP-HGAATWGSGNAATDWNTAAEKIGKHLLTKHPEFKGLVFVEGL-------GYSIEFEKIKTHPIDFGKPEFNERLVYSPHQYGPSVTGDLHFAGYVNFPASQLSEWERCWGFIEEKTGHACVLGEWGGKYDSYHNDKDMVWQDRFAKYLVEKCMSDQFVWDLNPESGDTGGVLKANWWDAEEKKLALYDTVQPHPSWLWKEGDT---FYLEPGEYANPKCD 434          
BLAST of NO19G02670 vs. NCBI_GenBank
Match: EWM20925.1 (cellulase 2 [Nannochloropsis gaditana])

HSP 1 Score: 225.7 bits (574), Expect = 2.700e-55
Identity = 137/381 (35.96%), Postives = 202/381 (53.02%), Query Frame = 0
Query:   31 ATPITACLLLRG-LSWTTEQGAILLNSRHHFHMKGLTWFGMDTADTRAPHGLW---ATTLDDVLDFLALNKFNVLRLPVAYTIACDLALRVPSSA-ISSDSSLHGLNVGKLLDSIFERAAARGILVVLALYNDDATTLFGSQDQGLWYGSKASYQNFQNAWRRLLTRYGDRWNLLGVDLLDRPGRGRATWAENNPSTDWNLAAQDTAAILIQEYPQYHGLWFIQGIEGGEFAAQYATDLRGALTQSLDLFTPASTKRVVYEVLLMGPSVSPSMGYVYTTSFPDQMYAAYDDLFGGVEEATGRAVVVGKWGGSLDDAQQGDAMWQKAVADYFIDRCLDDTIYWALNPNAKDTGGVLSADWRTPNEAKLALLARIQPRPSVLL 407
            AT +TA   L+G L+WT+E+  +L+N+R  F +KG+ WFG +T D +  HGLW   + TL D LD LA + FN +RLP +  +A  L    P    + +D+SL  L  G+++D + E A  RG++V+L  +  D     G  D  LWY           +W  +L R+   WN+  +DL + P  G  +W      TDW  A++     +   +P + GL+F+ GI GG     +  + R      +D+ +    +RVVY   + GP V P   Y  + SFPD + A +D  +G +      AVVV +WGG     +  DA WQ+ +A Y  ++ + D  YW LNPN+ DTGG+L  DW T +E KL LL  +QP PS LL
Sbjct:    6 ATGLTA---LKGPLTWTSERRMVLVNNR-QFRIKGINWFGFETPD-KCVHGLWGGLSKTLTDYLDLLAFHGFNAIRLPFSVKLALALDTTYPEPGFVQADASLSSLTSGQIMDKLVEEAGKRGMMVMLDQHRLDPDR--GISD--LWYDEGYEEPVILRSWDIMLARFKTHWNVFALDLKNEP-HGPCSWGSGEALTDWKAASERIIRHIAAAHPDFRGLFFVSGIWGGG-GHWWGGNFRRVREHPVDVGSTGLNRRVVYTPHVYGPDVFP-QSYFSSWSFPDNLPAVWDLHWGFLSGVLETAVVVSEWGGF---CRGKDAKWQERIARYLREKGMADNFYWCLNPNSGDTGGILLDDWSTMHEQKLKLLRDVQPEPSRLL 371          
BLAST of NO19G02670 vs. NCBI_GenBank
Match: EWM23139.1 (cellulase 2 [Nannochloropsis gaditana])

HSP 1 Score: 214.2 bits (544), Expect = 8.200e-52
Identity = 127/391 (32.48%), Postives = 206/391 (52.69%), Query Frame = 0
Query:   45 WTTEQGAILLNSRHHFHMKGLTWFGMDTADTRAPHGLWATTLDDVLDFLALNKFNVLRLPVAYTIACDLALRVPSSAISS----DSSLHGLNVGKLLDSIFERAAARGILVVLALYNDDATTLFGSQDQGLWYGSKASYQNFQNAWRRLLTRYGDRWNLLGVDLLDRPGRGRATWAENNPSTDWNLAAQDTAAILIQEYPQYHGLWFIQGIEGGEFAAQYA----TDLRGALTQSLDLFTPASTKRVVYEVLLMGPSVSPSMGYVYTTSFPDQMYAAYDDLFGGVEEATGRAVVVGKWGGSLDDAQQGDAMWQKAVADYFIDRCLDDTIYWALNPNAKDTGGVLSADWRTPNEAKLALLARIQPRPSVLLRNAEPEGGWSFMPGSSANPIC 428
            +T+E G+++LN  +  ++KGL W+G +  +     GL   + +  + FLA ++FN LRLP     + +   R   S +++       + GL  G+++D IF+ AAA+GIL++L L+        G  D  LWY   A      + W  LL R+  RWNLLG+DL + P  G A+W   +P TDWN  A  +   L    P +HG++F++GIE   + + +A     +L G     +   +    +RVVY   + GP V P   Y   + FPD M   +D  FG +E++TGRAVV+G+WGGS+   ++  A  QK +A++ +  C+ D  +W LNP  +  GG+L+ D++  ++  L +L  +QP+P+              + G+ AN  C
Sbjct:  177 YTSENGSVMLNG-NPLYLKGLNWYGFE-GELFVLDGLAVWSPERFMSFLASHRFNALRLP----FSLEWLARGLDSPLANIYVVQEDMRGLTQGQVMDRIFDAAAAQGILILLDLHVISVEK--GITD--LWYDETADGALVLDLWTLLLRRFAGRWNLLGIDLKNEP-HGIASWGHGHPKTDWNAFATKSIQTLATRVPDFHGVFFVEGIERPRWNSPHAYWWGGNLEGVRKYPISTGSEDLDRRVVYSPHIYGPEVFPRHRYFQDSRFPDNMPGIWDHQFGWIEKSTGRAVVLGEWGGSIVGDRKAAANQQK-LAEWLVHACIPDNFWWCLNPATEFNGGLLARDYQAVDKNVLQMLHYVQPKPTTFHGGIGAGDPLCVVDGAFANVRC 555          
BLAST of NO19G02670 vs. NCBI_GenBank
Match: XP_012751935.1 (hypothetical protein SAMD00019534_080210 [Acytostelium subglobosum LB1] >GAM24846.1 hypothetical protein SAMD00019534_080210 [Acytostelium subglobosum LB1])

HSP 1 Score: 210.3 bits (534), Expect = 1.200e-50
Identity = 139/403 (34.49%), Postives = 203/403 (50.37%), Query Frame = 0
Query:   18 SMLRGGKSDFASLATPITACLL----LRGLSWTTEQGAILLNSRHHFHMKGLTWFGMDTADTRAPHGLWATTLDDVLDFLALNKFNVLRLPVAYTIACDLALRVPSS---AISSDSSLHGLNVGKLLDSIFERAAARGILVVLALYNDDATTLFGSQDQ---GLWYGSKASYQNFQNAWRRLLTRYGDRWNLLGVDLLDRPGRGRATWAENNPSTDWNLAAQDTAAILIQEYPQYHGLWFIQGIEGGE-------FAAQYATDLRGALTQSLDLFTPASTKRVVYEVLLMGPSVSPSMGYVYTTSFPDQMYAAYDDLFGGVEEATGRAVVVGKWGGSLDDAQQGDAMWQKAVADYFIDRCLDDTIYWALNPNAKDTGGVLSADWRTPNEAKLALLARIQPRPS 404
            S L GG S    L  P+    +     R +++T++ G + +N   +F +KG+ WFG +T +T   HGLW+      LDFL  N FN +R+P  + +   L   +P+S       +S LHGL    +LD I E A  RGI ++L L++      FG  D+   GLWY S  + Q    AW  L+ RYG  WN++GVDL + P    ATW   NP TDW+ A     +  IQ       L F QG+   +       +   + ++ R + T+ L         + VY     GPSV  +  +   +SFPD M   +D  FG + + T RAVV+G+WGG    A+  D +W  +   Y  +R   D+ YW LNPN+ DTGG+L  DW + N+ KL LL ++ P P+
Sbjct:  148 SKLSGGNSHSGVLTPPLIKVKMNNHHYREVNFTSKDGCLWIND-VNFKLKGINWFGCET-ETSVVHGLWSRDYKQYLDFLQANHFNAIRIP--FCLEMILKDPIPTSISITTHMNSDLHGLRALSVLDIIIEAAGERGIFILLDLHS------FGPNDRLHDGLWYNSAHTEQETLKAWNILILRYGRTWNVMGVDLKNEP--YSATWDSGNPLTDWDKAINRIGS-FIQTNGGNRWLIFGQGVPSQQSSSLPCCWGESFESEGRQSDTKPLTTIHLPIEDKFVYSPHCYGPSV-VNHNHFRHSSFPDNMMPHWDANFGMLPQTTRRAVVIGEWGGKY--AENLDRLWMTSFVKYLQNRGCTDSFYWCLNPNSGDTGGLLKDDWVSINQDKLDLLHKLCPHPT 534          
BLAST of NO19G02670 vs. NCBI_GenBank
Match: ADV58305.1 (cellulase 1, partial [Pristionchus pacificus] >ADV58306.1 cellulase 1, partial [Pristionchus pacificus] >ADV58309.1 cellulase 1, partial [Pristionchus pacificus])

HSP 1 Score: 208.4 bits (529), Expect = 4.500e-50
Identity = 128/366 (34.97%), Postives = 195/366 (53.28%), Query Frame = 0
Query:   45 WTTEQGAILLNSRHHFHMKGLTWFGMDTADTRAPHGLWATTLDDVLDFLALNKFNVLRLPVAYTIACDLALRVPSSAISSDSSLHGLNVGKLLDSIFERAAARGILVVLALYNDDATTLFGSQDQGLWYGSKASYQNFQ--NAWRRLLTRYGDRWNLLGVDLLDRPGRGRATWAENNPSTDWNLAAQDTAAILIQEYPQYHGLWFIQGIE-GGEF--AAQYATDLRGALTQSLDLFTPASTKRVVYEVLLMGPSV--SPSMGYVYTTSFPDQMYAAYDDLFGGVEEATGRAVVVGKWGGSLDDAQQGDAMWQKAVADYFIDRCLDDTIYWALNPNAKDTGGVLSADWRTPNEAKLALLARIQPRPS 404
            WTT+ G I++N +    +KG+ +FG +T +T APHG+W   L+D+LDF+  N FN +R+P +  +  D  + + +    ++ +L G +  ++LD   +RAA RG+L+VL   ++  T   G     LWY + A Y   +    W+ L+ RY D+WN+  +DL + P    ATW+ +N +TDWN AA+     +I    ++ GL+F+ GIE GG F  A QY  +   A             +RVVY     GP V   P      T  +   +   Y   +G + E  G  VV+G+WGG      + DA W     D+  D+C+ +  YWALNPN+  TGG+L  DW+TP + KL L+ R QP P+
Sbjct:    2 WTTDDGRIMVNGQ-PLVLKGVNYFGFET-ETYAPHGIWDHNLNDMLDFIKDNNFNAIRVPFSMQMVRDNPV-IMNVHCHNNPNLCGTSALRMLDIFIDRAAERGLLIVL---DNHRTQSGGYISPPLWYNNSAGYPEDEVIRLWKHLVMRYKDQWNMFAIDLKNEP-HDAATWSRSNRNTDWNQAAER----MINALHEFPGLFFVGGIEWGGRFENADQYPIETGHA----------HLNERVVYSPHCYGPDVYDRPEFHVENTHEYAKNLDRIYTAKYGFLAE-KGYPVVIGEWGGKAKPGTR-DAKWNNWFVDWIRDKCMTNNFYWALNPNSGHTGGLLDDDWKTPIQHKLDLVNRAQPNPT 344          
BLAST of NO19G02670 vs. NCBI_GenBank
Match: ADV58291.1 (cellulase 1, partial [Pristionchus pacificus])

HSP 1 Score: 208.0 bits (528), Expect = 5.900e-50
Identity = 128/366 (34.97%), Postives = 195/366 (53.28%), Query Frame = 0
Query:   45 WTTEQGAILLNSRHHFHMKGLTWFGMDTADTRAPHGLWATTLDDVLDFLALNKFNVLRLPVAYTIACDLALRVPSSAISSDSSLHGLNVGKLLDSIFERAAARGILVVLALYNDDATTLFGSQDQGLWYGSKASYQNFQ--NAWRRLLTRYGDRWNLLGVDLLDRPGRGRATWAENNPSTDWNLAAQDTAAILIQEYPQYHGLWFIQGIE-GGEF--AAQYATDLRGALTQSLDLFTPASTKRVVYEVLLMGPSV--SPSMGYVYTTSFPDQMYAAYDDLFGGVEEATGRAVVVGKWGGSLDDAQQGDAMWQKAVADYFIDRCLDDTIYWALNPNAKDTGGVLSADWRTPNEAKLALLARIQPRPS 404
            WTT+ G I++N +    +KG+ +FG +T +T APHG+W   L+D+LDF+  N FN +R+P +  +  D  + + +    ++ +L G +  ++LD   +RAA RG+L+VL   ++  T   G     LWY + A Y   +    W+ L+ RY ++WN+  +DL + P    ATW  +N +TDWN AA+     +I    ++ GL+F+ GIE GG F  AAQY  +   A             +RVVY     GP V   P      T  +   +   Y   +G + E  G  VV+G+WGG      + DA W     D+  D+C+ +  YWALNPN+  TGG+L  DW+TP + KL L+ R QP P+
Sbjct:    2 WTTDDGRIMVNGQ-PLVLKGVNYFGFET-ETYAPHGIWDHNLNDMLDFIKDNNFNAIRVPFSMEMVRDNPV-IMNVHCHNNPNLCGTSALRMLDIFIDRAAERGLLIVL---DNHRTQSGGYISPPLWYNNSAGYPEDEVIRLWKHLVMRYKNQWNVFAIDLKNEP-HDAATWGRSNRNTDWNQAAER----MINALHEFPGLFFVGGIEWGGRFENAAQYPIETGHA----------HLNERVVYSPHCYGPDVYDRPEFHVENTHEYAKNLDRIYTAKYGFLAE-KGYPVVIGEWGGKAKPGTR-DAKWNNWFVDWIRDKCMTNNFYWALNPNSGHTGGLLDDDWKTPIQHKLDLVNRAQPNPT 344          
BLAST of NO19G02670 vs. NCBI_GenBank
Match: ADV58304.1 (cellulase 1, partial [Pristionchus pacificus])

HSP 1 Score: 208.0 bits (528), Expect = 5.900e-50
Identity = 128/366 (34.97%), Postives = 195/366 (53.28%), Query Frame = 0
Query:   45 WTTEQGAILLNSRHHFHMKGLTWFGMDTADTRAPHGLWATTLDDVLDFLALNKFNVLRLPVAYTIACDLALRVPSSAISSDSSLHGLNVGKLLDSIFERAAARGILVVLALYNDDATTLFGSQDQGLWYGSKASYQNFQ--NAWRRLLTRYGDRWNLLGVDLLDRPGRGRATWAENNPSTDWNLAAQDTAAILIQEYPQYHGLWFIQGIE-GGEF--AAQYATDLRGALTQSLDLFTPASTKRVVYEVLLMGPSV--SPSMGYVYTTSFPDQMYAAYDDLFGGVEEATGRAVVVGKWGGSLDDAQQGDAMWQKAVADYFIDRCLDDTIYWALNPNAKDTGGVLSADWRTPNEAKLALLARIQPRPS 404
            WTT+ G I++N +    +KG+ +FG +T +T APHG+W   L+D+LDF+  N FN +R+P +  +  D  + + +    ++ +L G +  ++LD   +RAA RG+L+VL   ++  T   G     LWY + A Y   +    W+ L+ RY ++WN+  +DL + P    ATW  +N +TDWN AA+     +I    ++ GL+F+ GIE GG F  AAQY  +   A             +RVVY     GP V   P      T  +   +   Y   +G + E  G  VV+G+WGG      + DA W     D+  D+C+ +  YWALNPN+  TGG+L  DW+TP + KL L+ R QP P+
Sbjct:    2 WTTDDGRIMVNGQ-PLVLKGVNYFGFET-ETYAPHGIWDHNLNDMLDFIKDNNFNAIRVPFSMEMVRDNPV-IMNVHCHNNPNLCGTSALRMLDIFIDRAAERGLLIVL---DNHRTQSGGYISPPLWYNNSAGYPEDEVIRLWKHLVMRYKNQWNVFAIDLKNEP-HDAATWGRSNRNTDWNQAAER----MINALHEFPGLFFVGGIEWGGRFENAAQYPIETGHA----------HLNERVVYSPHCYGPDVYDRPEFHVENTHEYAKNLDRIYTAKYGFLAE-KGYPVVIGEWGGKAKPGTR-DAKWNNWFVDWIRDKCMTNNFYWALNPNSGHTGGLLDDDWKTPIQHKLDLVNRAQPNPT 344          
BLAST of NO19G02670 vs. NCBI_GenBank
Match: ADV58289.1 (cellulase 1, partial [Pristionchus pacificus])

HSP 1 Score: 207.2 bits (526), Expect = 1.000e-49
Identity = 128/373 (34.32%), Postives = 199/373 (53.35%), Query Frame = 0
Query:   45 WTTEQGAILLNSRHHFHMKGLTWFGMDTADTRAPHGLWATTLDDVLDFLALNKFNVLRLPVAYTIACDLALRVPSSAISSDSSLHGLNVGKLLDSIFERAAARGILVVLALYNDDATTLFGSQDQGLWYGSKASYQNFQ--NAWRRLLTRYGDRWNLLGVDLLDRPGRGRATWAENNPSTDWNLAAQDTAAILIQEYPQYHGLWFIQGIE-GGEF--AAQYATDLRGALTQSLDLFTPASTKRVVYEVLLMGPSVSPSMGY--VYTTSFPDQMYAAYDDLFGGVEEATGRAVVVGKWGGSLDDAQQGDAMWQKAVADYFIDRCLDDTIYWALNPNAKDTGGVLSADWRTPNEAKLALLARIQPRPSVLLRNAE 411
            WTT+ G I++N +    +KG+ +FG +T +T APHG+W   L+D+LDF+  N FN +R+P +  +  D  + + +    ++ +L G +  ++LD   +RAA RG+L+VL   ++  T   G     LWY + A Y   +    W++L+ +Y ++WN+  +DL + P R  ATW  +N +TDWN AA+     +I    ++ G +F+ GIE GG F  AAQY  D   A             +RVVY     GP V     +    T  +   +   Y   +G + E  G  VV+G+WGG      + DA W     D+  D+C+ +  YWALNPN+  TGG+L  DW+TP + KL L+ R QP P+   ++ E
Sbjct:    2 WTTDDGRIMVNGQ-PLVLKGVNYFGFET-ETYAPHGIWDHNLNDMLDFIKDNNFNAIRVPFSMEMVRDNPV-IMNVHCHNNPNLCGTSALRMLDIFIDRAAERGLLIVL---DNHRTQSGGYISPPLWYNNSAGYPEDEVIRLWKQLVMKYKNQWNVFAIDLKNEP-RDAATWGRSNRNTDWNQAAER----MINALHEFPGFFFVGGIEWGGRFENAAQYPIDSGRA----------HLNERVVYSPHCYGPDVYDRSEFHVENTHEYAKNLDRIYTAKYGFLAE-KGYPVVIGEWGGKAKPGTR-DAKWNNWFVDWIRDKCMTNNFYWALNPNSGHTGGLLEDDWKTPIQHKLDLVNRAQPNPTKFKKHNE 351          
BLAST of NO19G02670 vs. NCBI_GenBank
Match: ADV58311.1 (cellulase 1, partial [Pristionchus pacificus])

HSP 1 Score: 207.2 bits (526), Expect = 1.000e-49
Identity = 127/373 (34.05%), Postives = 199/373 (53.35%), Query Frame = 0
Query:   45 WTTEQGAILLNSRHHFHMKGLTWFGMDTADTRAPHGLWATTLDDVLDFLALNKFNVLRLPVAYTIACDLALRVPSSAISSDSSLHGLNVGKLLDSIFERAAARGILVVLALYNDDATTLFGSQDQGLWYGSKASYQNFQ--NAWRRLLTRYGDRWNLLGVDLLDRPGRGRATWAENNPSTDWNLAAQDTAAILIQEYPQYHGLWFIQGIE-GGEF--AAQYATDLRGALTQSLDLFTPASTKRVVYEVLLMGPSVSPSMGY--VYTTSFPDQMYAAYDDLFGGVEEATGRAVVVGKWGGSLDDAQQGDAMWQKAVADYFIDRCLDDTIYWALNPNAKDTGGVLSADWRTPNEAKLALLARIQPRPSVLLRNAE 411
            WTT+ G I++N +    +KG+ +FG +T +T APHG+W   L+D+LDF+  N FN +R+P +  +  D  + + +    ++ +L G +  ++LD   +RAA RG+L+VL   ++  T   G     LWY + A Y   +    W++L+ +Y ++WN+  +DL + P R  ATW  +N +TDWN AA+     +I    ++ G +F+ GIE GG F  AAQY  +   A             +RVVY     GP V     +    T  +   +   Y   +G + E  G  VV+G+WGG      + DA W     D+  D+C+ +  YWALNPN+  TGG+L  DW+TP + KL L+ R QP P+   ++ E
Sbjct:    2 WTTDDGRIMVNGQ-PLVLKGVNYFGFET-ETYAPHGIWDHNLNDMLDFIKDNNFNAIRVPFSMEMVRDNPV-IMNVHCHNNPNLCGTSALRMLDIFIDRAAERGLLIVL---DNHRTQSGGYISPPLWYNNSAGYPEDEVIRLWKQLVMKYKNQWNVFAIDLKNEP-RDAATWGRSNRNTDWNQAAER----MINALHEFPGFFFVGGIEWGGRFENAAQYPIETGRA----------HLNERVVYSPHCYGPDVYDRSEFHVENTHEYAKNLDRIYTAKYGFLAE-KGYPVVIGEWGGKAKPGTR-DAKWNNGFVDWIRDKCMTNNFYWALNPNSGHTGGLLEDDWKTPIQHKLDLVNRAQPNPTKFKKHNE 351          
The following BLAST results are available for this feature:
BLAST of NO19G02670 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM26490.16.000e-7137.98cellulase 2 [Nannochloropsis gaditana][more]
EWM26893.12.500e-5633.85cellulase 2 [Nannochloropsis gaditana][more]
EWM20925.12.700e-5535.96cellulase 2 [Nannochloropsis gaditana][more]
EWM23139.18.200e-5232.48cellulase 2 [Nannochloropsis gaditana][more]
XP_012751935.11.200e-5034.49hypothetical protein SAMD00019534_080210 [Acytoste... [more]
ADV58305.14.500e-5034.97cellulase 1, partial [Pristionchus pacificus] >ADV... [more]
ADV58291.15.900e-5034.97cellulase 1, partial [Pristionchus pacificus][more]
ADV58304.15.900e-5034.97cellulase 1, partial [Pristionchus pacificus][more]
ADV58289.11.000e-4934.32cellulase 1, partial [Pristionchus pacificus][more]
ADV58311.11.000e-4934.05cellulase 1, partial [Pristionchus pacificus][more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniR099ncniR099Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR039ngnoR039Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO19G02670.1NO19G02670.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|561228gene_10951Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO19G02670.1NO19G02670.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO19G02670 ID=NO19G02670|Name=NO19G02670|organism=Nannochloropsis oceanica|type=gene|length=1734bp
ATGCTCCTCGCCCTGGTCGCCGCCCAGAGTCCGTCCCGGGCGCCGGCCCG
GAGTATGCTGCGCGGCGGCAAAAGCGATTTCGCCTCCCTCGCCACGCCCA
TCACCGCCTGTCTCCTTCTGCGTGGCTTATCGTGGACCACGGAACAAGGT
GCTATCCTACTTAACAGTCGTCATCACTTTCACATGAAGGGACTGACGTG
gtgagtaaaagtatgcgaccttcgattttcttggccagaggccgggcacg
cctcttaccccttgggggctttgtcctctaagagaaggacataaattctg
actctctctcctctctgtttctccttttcttgccttttctttttcttctc
caagGTTTGGCATGGATACGGCCGACACGCGGGCTCCTCACGGTTTGTGG
GCTACGACCCTTGACGACGTATTGGACTTCTTGGCCCTCAACAAGTTCAA
CGTGCTTCGCCTTCCTGTTGCATATACCATAGCGTGTGATTTGGCCCTGC
GCGTTCCGAGCTCAGCTATATCCAGTGATTCCTCTTTGCACGGACTGAAC
GTGGGAAAGCTACTCGACAGCATCTTTGAGCGGGCAGCAGCGCGGGGCAT
TTTAGTGGTACTCGCCCTCTACAACGACGACGCTACCACACTCTTCGGCT
CCCAAGACCAGGGGCTGTGGTATGGCTCCAAAGCTTCATACCAAAATTTC
CAAAACGCCTGGCGCCGGCTCTTGACTCGATATGGCGACCGTTGGAACCT
GTTGGGTGTGGACCTGCTCGACCGCCCAGGCCGGGGCCGCGCAACGTGGG
CCGAAAACAACCCCAGCACGGACTGGAACTTGGCAGCTCAAGACACGGCA
GCCATCCTCATTCAGGAATACCCTCAGTACCATGGCTTATGGTTCATACA
AGGTATTGAGGGCGGGGAATTTGCAGCCCAATATGCGACGGACCTGCGCG
GTGCCTTGACCCAGTCGCTGGACCTGTTTACCCCGGCGAGTACAAAGCGT
GTGGTATACGAAGTGCTGCTCATGGGGCCTTCCGTCTCCCCGTCGATGGG
ATATGTATATACCACATCTTTCCCCGATCAGATGTATGCGGCTTATGACG
ACCTCTTTGGTGGCGTAGAGGAGGCGACTGGCCGAGCCGTGGTGGTTGGC
AAGTGGGGCGGTTCCCTCGATGATGCGCAGCAGGGTGATGCCATGTGGCA
AAAGGCCGTTGCCGATTACTTTATCGACCGGTGCTTAGACGACACTATCT
ACTGGGCCCTTAATCCTAATGCCAAAGATACAGGCGGTGTGCTATCGGCC
GATTGGCGGACCCCTAACGAAGCCAAATTGGCGTTGCTGGCCCGGATACA
ACCCCGCCCATCGGTCTTACTCCGCAACGCCGAGCCAGAGGGCGGGTGGT
CTTTTATGCCTGGCAGCTCGGCGAATCCCATCTGCAATTTGTAAATCAAG
AGGTAGAGGAAGGCAGGACAGGAACAGGCCTAGAGAGGGCAGAGATCGAA
GAAGGATGGTGAGCAAGAAAGGGAAGGAGCAGGTAACGATAGCATGAAAA
GTAGTAAAGGTTAGGAAAGTGAGAAGAATAAGATGGCTTTAATTGGTAGA
AGGGAAAGACGATCCAAGAAAAAAGAAATATGATCAAAAACAAATCGTCA
GCGCATGCAAGCACAACAAGCGAAAAAGAGATGGAAACAAAAAGTACCAT
TAAACAATCCTACCTTGTGGCTCATTAAACCGCC
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protein sequence of NO19G02670.1

>NO19G02670.1-protein ID=NO19G02670.1-protein|Name=NO19G02670.1|organism=Nannochloropsis oceanica|type=polypeptide|length=430bp
MLLALVAAQSPSRAPARSMLRGGKSDFASLATPITACLLLRGLSWTTEQG
AILLNSRHHFHMKGLTWFGMDTADTRAPHGLWATTLDDVLDFLALNKFNV
LRLPVAYTIACDLALRVPSSAISSDSSLHGLNVGKLLDSIFERAAARGIL
VVLALYNDDATTLFGSQDQGLWYGSKASYQNFQNAWRRLLTRYGDRWNLL
GVDLLDRPGRGRATWAENNPSTDWNLAAQDTAAILIQEYPQYHGLWFIQG
IEGGEFAAQYATDLRGALTQSLDLFTPASTKRVVYEVLLMGPSVSPSMGY
VYTTSFPDQMYAAYDDLFGGVEEATGRAVVVGKWGGSLDDAQQGDAMWQK
AVADYFIDRCLDDTIYWALNPNAKDTGGVLSADWRTPNEAKLALLARIQP
RPSVLLRNAEPEGGWSFMPGSSANPICNL*
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Synonyms
Publications