NO19G02570, NO19G02570 (gene) Nannochloropsis oceanica

Overview
NameNO19G02570
Unique NameNO19G02570
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2351
Alignment locationchr19:764922..767272 -

Link to JBrowse

Properties
Property NameValue
Description4-hydroxybenzoyl-thioesterase family active site protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr19genomechr19:764922..767272 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR029069HotDog_dom
Homology
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BLAST of NO19G02570 vs. NCBI_GenBank
Match: XP_005853517.1 (4-hydroxybenzoyl- thioesterase family active site protein [Nannochloropsis gaditana CCMP526] >EKU22844.1 4-hydroxybenzoyl- thioesterase family active site protein [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 143.7 bits (361), Expect = 9.100e-31
Identity = 75/130 (57.69%), Postives = 90/130 (69.23%), Query Frame = 0 
Query:   88 SLTQGVFIEHTDRYGMVYHSNYLLFLCRALHLTLGRHVVTRLDNFRFKASARLGHDIAIDVRPKAGKDNTFVTSIKESETPHTTFITADVSAFPLPERGREGG---------REDWAAYTISEEEALRKV 209
            SL  GVFI+HTDRYGMVYHSNYLLFL RAL+  LGRHV+ +LDNFRFKASARLGHD+ +DV   + K + F  SIKESE PHTTFITA++ A+P+ E GR               W    IS++  LR+V
Sbjct:   63 SLALGVFIQHTDRYGMVYHSNYLLFLSRALYSWLGRHVIVQLDNFRFKASARLGHDVMVDVTRTSDKPSLFSASIKESEAPHTTFITANIVAYPVDE-GRXXXXXXXXXXXRAHQWFVPAISDDAGLREV 191
The following BLAST results are available for this feature:
BLAST of NO19G02570 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 1
Match NameE-valueIdentityDescription
XP_005853517.19.100e-3157.694-hydroxybenzoyl- thioesterase family active site ... [more]
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoR039ngnoR039Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
Naga_102336g1gene6701Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO19G02570.5NO19G02570.5Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO19G02570.4NO19G02570.4Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO19G02570.3NO19G02570.3Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO19G02570.2NO19G02570.2Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO19G02570.1NO19G02570.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO19G02570.5NO19G02570.5-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO19G02570.4NO19G02570.4-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO19G02570.3NO19G02570.3-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO19G02570.2NO19G02570.2-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO19G02570.1NO19G02570.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


Sequences
The following sequences are available for this feature:

gene sequence

>NO19G02570 ID=NO19G02570|Name=NO19G02570|organism=Nannochloropsis oceanica|type=gene|length=2351bp
CAACAGGATGAGAATACCTTCCCTTATCCTTTGCTTCGCATTTCTAGCGA
GCGCTCCCGCTGTTGCCTTCCTGCTGCCGCCGCTGCCTTGCTTCTCTTCT
TCGCTTCAGACAGTCACCAACACAATCACGACAAGCAGTCGCTTCAGCAG
CAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGACCAAGAT
GCAGCCCCTTGTTATCCGTCACGACTGCCGCTACTGCTTCATCTGCGACA
GAGGAAGCGGAAAACCCGAGCTTGACTCAAGGAGTATTCATCGAGCATAC
CGACAGGTgtacgttgttacgtccttgcttccctcctcctcctaaccttt
ccttcctggtttttgttgcacatgtattcgtatgatcccatgtagcattt
ccttatttaatttcgtcgaacatcttttctgctctttagcatctcattcc
ctccctgtctccctccctccctccctccctccctccctccctcctcccta
gACGGGATGGTCTACCACTCCAACTACCTGCTCTTCCTCTGTCGCGCTCT
CCACCTCACCCTGGGCCGGCACGTGGTGACACGCCTAGATAACTTTCGGT
TCAAAGCATCGGCTCGCCTGGGCCACGATATCGCCATCGACGTGAGGCCC
AAGGCGGGGAAAGACAAgtaagcagggagaaagagagggcaggagggaag
gcgcggaggtgcgtgagattgaatcgtttgaggtctccgcgcgcctagtt
tatttgttaatacattcaatcttaatcttcttgggggggaggcggagaag
aaaagaaagaaggaggacatgtgcagtgcagcgactctgacattcatgcc
gtcattgatcctccctccttcccttcctcccttcctcccttcctccctcc
cagCACTTTCGTCACCAGCATCAAGGAAAGCGAAACTCCTCACACTACCT
TTATCACCGCGGACGTATCGGCCTTCCCCCTTCCTGAGCGAGGAAGGGAG
GGAGGAAGGGAGGATTGGGCTGCATATACGATCTCGGAGGAAGAGGCATT
GAGGAAGgtaaagagggagggagcgggaaggggaggaagagtataagggg
agaagattgcttggcgggacgacttgacaaggtgcttgtatctcggccag
gtgacttattttttcgacactccctccctccccccctccctccctccctc
cctcccaagGTGGTGGCCTCCCCCGACAAGGTCATGGAGGCCGTTTTGTG
GACCGACGAGCTGGGAGTGCACGGCCTGCTCACACCGCATGCCGTCCTTT
CCCTGTTTGAGCGGGGAAGGAGTGATTCCCTGGGTgtacgtagcgccttg
tccttccctccctccctccctccctccctccctcccgcctaccttttctt
ggctgagatgaatagagggtggcattatatctacatatatacatatatgt
agatatatgtatatgtatgtgggtgtctgtgtgtctgtatctgtctctct
gtgcacattaatctactcctttacacctccatacactcagGGTCCGGACC
GCCTGGAGGAGCTCATGGATGACGGCTACATGTTCGTCGTCGCCCGCATC
GACGGgtacgatcatgagatgggccttccctccctcccttcccttcatcc
ctccctccttccctgcccccctcttttctacattctccttcttgatggct
cgtggtatctttgtcattaataagagcctaaagacttactgtcctctgtc
cgcttaccctccctccctccctccctccctccctccctccctccctccct
catgtccagCTACCGCTTCGACCCCTCCCTCCGTCTCGAGGAGGGAGAGG
CCCTTCAAGTGCTCGGCCGATTTAAGCCCAAGTCCGACGCCATCGTTGTA
TGCGAGCAGgtgggaggaaaggaaaaaggagggcgggagaggaagaggac
aggctacagaccgatggttgcatcttttctgaatctttccttcatgcagt
catttaagcccacatactatcgtcgcatttcctcctcccctttttccttc
ttactctaccgcttccctttcccctctcctccgggtaattttgtcaagGT
CCTCATCGTCAAGGCCACCCAACAGATCGTGGCTCAGGCCCTCGTGACGC
TTGCCTGCATCGGCGCCGTGGATGGCAAATTGCGAGGCGTGCCTTCCAAG
GCCCTTGAGAGTATGAACATGGGCACGACGTAGAATCACGACAGGGTAGG
ACAGAAAAAGAGAGAGGAGAGCAGGGAAATGTATTTCTAGATGTGGAGGG
AGGAGGCAGGCAGGACATGCCAAAATGAAGTAATAATTGTAAGGTTGTCC
G
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protein sequence of NO19G02570.5

>NO19G02570.5-protein ID=NO19G02570.5-protein|Name=NO19G02570.5|organism=Nannochloropsis oceanica|type=polypeptide|length=288bp
MRIPSLILCFAFLASAPAVAFLLPPLPCFSSSLQTVTNTITTSSRFSSSS
SSSSSSSSSSSRPRCSPLLSVTTAATASSATEEAENPSLTQGVFIEHTDR
YGMVYHSNYLLFLCRALHLTLGRHVVTRLDNFRFKASARLGHDIAIDVRP
KAGKDNTFVTSIKESETPHTTFITADVSAFPLPERGREGGREDWAAYTIS
EEEALRKVVASPDKVMEAVLWTDELGVHGLLTPHAVLSLFERGRSDSLGV
RSALSFPPSLPPSLPPAYLFLAEMNRGWHYIYIYTYM*
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protein sequence of NO19G02570.4

>NO19G02570.4-protein ID=NO19G02570.4-protein|Name=NO19G02570.4|organism=Nannochloropsis oceanica|type=polypeptide|length=288bp
MRIPSLILCFAFLASAPAVAFLLPPLPCFSSSLQTVTNTITTSSRFSSSS
SSSSSSSSSSSRPRCSPLLSVTTAATASSATEEAENPSLTQGVFIEHTDR
YGMVYHSNYLLFLCRALHLTLGRHVVTRLDNFRFKASARLGHDIAIDVRP
KAGKDNTFVTSIKESETPHTTFITADVSAFPLPERGREGGREDWAAYTIS
EEEALRKVVASPDKVMEAVLWTDELGVHGLLTPHAVLSLFERGRSDSLGV
RSALSFPPSLPPSLPPAYLFLAEMNRGWHYIYIYTYM*
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protein sequence of NO19G02570.3

>NO19G02570.3-protein ID=NO19G02570.3-protein|Name=NO19G02570.3|organism=Nannochloropsis oceanica|type=polypeptide|length=412bp
MRIPSLILCFAFLASAPAVAFLLPPLPCFSSSLQTVTNTITTSSRFSSSS
SSSSSSSSSSSRPRCSPLLSVTTAATASSATEEAENPSLTQGVFIEHTDR
YGMVYHSNYLLFLCRALHLTLGRHVVTRLDNFRFKASARLGHDIAIDVRP
KAGKDNTFVTSIKESETPHTTFITADVSAFPLPERGREGGREDWAAYTIS
EEEALRKVVASPDKVMEAVLWTDELGVHGLLTPHAVLSLFERGRSDSLGG
PDRLEELMDDGYMFVVARIDGYRFDPSLRLEEGEALQVLGRFKPKSDAIV
VCEQVGGKEKGGRERKRTGYRPMVASFLNLSFMQSFKPTYYRRISSSPFS
FLLYRFPFPSPPGNFVKVLIVKATQQIVAQALVTLACIGAVDGKLRGVPS
KALESMNMGTT*
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protein sequence of NO19G02570.2

>NO19G02570.2-protein ID=NO19G02570.2-protein|Name=NO19G02570.2|organism=Nannochloropsis oceanica|type=polypeptide|length=349bp
MRIPSLILCFAFLASAPAVAFLLPPLPCFSSSLQTVTNTITTSSRFSSSS
SSSSSSSSSSSRPRCSPLLSVTTAATASSATEEAENPSLTQGVFIEHTDR
YGMVYHSNYLLFLCRALHLTLGRHVVTRLDNFRFKASARLGHDIAIDVRP
KAGKDNTFVTSIKESETPHTTFITADVSAFPLPERGREGGREDWAAYTIS
EEEALRKVVASPDKVMEAVLWTDELGVHGLLTPHAVLSLFERGRSDSLGG
PDRLEELMDDGYMFVVARIDGYRFDPSLRLEEGEALQVLGRFKPKSDAIV
VCEQVLIVKATQQIVAQALVTLACIGAVDGKLRGVPSKALESMNMGTT*
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protein sequence of NO19G02570.1

>NO19G02570.1-protein ID=NO19G02570.1-protein|Name=NO19G02570.1|organism=Nannochloropsis oceanica|type=polypeptide|length=247bp
MVYHSNYLLFLCRALHLTLGRHVVTRLDNFRFKASARLGHDIAIDVRPKA
GKDNTFVTSIKESETPHTTFITADVSAFPLPERGREGGREDWAAYTISEE
EALRKVVASPDKVMEAVLWTDELGVHGLLTPHAVLSLFERGRSDSLGGPD
RLEELMDDGYMFVVARIDGYRFDPSLRLEEGEALQVLGRFKPKSDAIVVC
EQVLIVKATQQIVAQALVTLACIGAVDGKLRGVPSKALESMNMGTT*
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Synonyms
Publications