NO19G02560, NO19G02560 (gene) Nannochloropsis oceanica

Overview
NameNO19G02560
Unique NameNO19G02560
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3595
Alignment locationchr19:760792..764386 -

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Properties
Property NameValue
DescriptionSerine/threonine-protein phosphatase 2A activator
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr19genomechr19:760792..764386 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0019211phosphatase activator activity
GO:0019211phosphatase activator activity
GO:0016853isomerase activity
GO:0003755peptidyl-prolyl cis-trans isomerase activity
Vocabulary: INTERPRO
TermDefinition
IPR037218PTPA_sf
IPR004327Phstyr_phstse_ac
Vocabulary: Biological Process
TermDefinition
GO:0043085positive regulation of catalytic activity
GO:0000413protein peptidyl-prolyl isomerization
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
Homology
BLAST of NO19G02560 vs. NCBI_GenBank
Match: CBJ28173.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 351.3 bits (900), Expect = 3.900e-93
Identity = 184/337 (54.60%), Postives = 218/337 (64.69%), Query Frame = 0
Query:    7 KTPVRAIYNETDLAAFHKSKTYADFLAFVRLCNERVRGIPVSEEYTHKDGPA---VGALVAYLEEAWGWVDDIPPLQQPMRFGNKAFRDWHSRLMATAAAAVEGLLVASEKFVAGTSETAAAAAELLPYLTSAFGHPVRIDYGTGHESSFFVFLYGLFRFQVLALDDLTAAVLQGFRSYLRTLRRLQAVYMLEPAGSHGVWGLDDYFCLVFYLGSSQLVDHPTLTPSAIHSDATLQAQKDDYLYLAQVSFIKELKARAPFAESSPMLNDISALPSWSKVNTGMLRLYEGEVLGKLPVIQHFLFGDFFPATWIPSP-PTDGPLPNTSHTGLETTKAPW 340
            + PVRAI   TDL  F +S TY + + F+RLCN+ V G+  S         A   V  +V  L +   WVDDIPP+ +PMRFGNKAFR W+ RL   A   V+ LL        GT    AAA EL+PYL  +FGHP RIDYGTGHE+SF V+L  LF+   L  +DL  A+LQ F SYL+ +RRLQ+VYMLEPAGSHGVWGLDDY CL F  GS+QL+DHP++ P  +  D  L   K DYLYL  + FIK LK  A F E  PMLNDIS LPSW KVNTGM RLYEG+VLGK+PVIQHFLFG   P TW PSP P   P+  +S  G    +APW
Sbjct:    4 RVPVRAIRTVTDLNHFKQSPTYKELMTFIRLCNDAVMGVRASSLQLDTPDTAMDTVSRIVRMLRQMGSWVDDIPPIDEPMRFGNKAFRSWYQRLEQEAGGMVDTLL-------EGTGH-EAAAVELVPYLLVSFGHPSRIDYGTGHETSFVVWLCCLFKLGSLTKEDLAPAILQVFYSYLQVMRRLQSVYMLEPAGSHGVWGLDDYHCLPFLWGSAQLIDHPSIKPHDVLDDNVLDEGKHDYLYLGAIDFIKSLKKGAAFGECCPMLNDISQLPSWKKVNTGMQRLYEGDVLGKMPVIQHFLFGSLLPCTWEPSPAPAVNPVAVSSFGG----RAPW 328          
BLAST of NO19G02560 vs. NCBI_GenBank
Match: XP_008620308.1 (hypothetical protein SDRG_15900 [Saprolegnia diclina VS20] >EQC26239.1 hypothetical protein SDRG_15900 [Saprolegnia diclina VS20])

HSP 1 Score: 330.5 bits (846), Expect = 7.100e-87
Identity = 168/331 (50.76%), Postives = 209/331 (63.14%), Query Frame = 0
Query:    9 PVRAIYNETDLAAFHKSKTYADFLAFVRLCNERVRGIPVSEEYTHKDGPAVGALVAYLEEAWGWVDDIPPLQQPMRFGNKAFRDWHSRLMATAAAAVEGLLVASEKFVAGTSETAAAAAELLPYLTSAFGHPVRIDYGTGHESSFFVFLYGLFRFQVLALDDLTAAVLQGFRSYLRTLRRLQAVYMLEPAGSHGVWGLDDYFCLVFYLGSSQLVDHPTLTPSAIHSDATLQAQKDDYLYLAQVSFIKELKARAPFAESSPMLNDISALPSWSKVNTGMLRLYEGEVLGKLPVIQHFLFGDFFPATWIPSPPTDGPLPNTSHTGLETTKAPW 340
            P RAI++E D+  F  S  Y   L F++  NE VRG  +S+EYT    P + AL   L     W+D+IPP+ QPMRFGNKAFRDW+ RL   A    E LL +      G  +   AA EL PYL  +FG+  RIDYGTGHE++F +++  L +   ++  D  A VL+ F +YL  +RRLQ  YMLEPAGSHGVWGLDDY CL FY GSSQL+   TL PS +H D  L A   DYLYL  V F++E+KA + FAE+SPMLNDIS + SW K+N+GML+LYEGEVL KLPVIQH LFG   P +W+PS   D      S T +    A W
Sbjct:   10 PQRAIFSEADMRQFLASDAYERHLVFIKHLNESVRGKKLSDEYTM--SPNIEALCGLLATLNSWIDEIPPIDQPMRFGNKAFRDWYDRLAQEAPKLHESLLAS-----IGMQD---AAIELSPYLIDSFGNRTRIDYGTGHETTFMLWICALHKIGFVSQADFPAVVLKVFHTYLTLMRRLQKTYMLEPAGSHGVWGLDDYQCLPFYFGSSQLIGQRTLAPSVVHDDGLLAAHSPDYLYLDAVKFVREVKAASAFAETSPMLNDISGVHSWEKINSGMLKLYEGEVLKKLPVIQHMLFGSLIPCSWVPSQSGDASYTPVSTTAVRAANANW 330          
BLAST of NO19G02560 vs. NCBI_GenBank
Match: OQR95096.1 (serine/threonine-protein phosphatase 2A regulatory subunit B' [Achlya hypogyna])

HSP 1 Score: 327.4 bits (838), Expect = 6.000e-86
Identity = 170/355 (47.89%), Postives = 213/355 (60.00%), Query Frame = 0
Query:    7 KTPVRAIYNETDLAAFHKSKTYADFLAFVRLCNERVRGIPVSEEYTHKDGPAVGALVAYLEEAWGWVDDIPPLQQPMRFGNKAFRDWHSRLMATAAAAVEGLLVASEKFVAGTSETAAAAAELLPYLTSAFGHPVRIDYGTGHESSFFVFLYGLFRFQVLALDDLTAAVLQGFRSYLRTLRRLQAVYMLEPAGSHGVWGLDDYFCLVFYLGSSQLVDHPTLTPSAIHSDATLQAQKDDYLYLAQVSFIKELKARAPFAESSPMLNDISALPSWSKVNTGMLRLYEGEVLGKLPVIQHFLFGDFFPATWIPSPPTDGPLPNTSHTGLETT--------KAPWYGETQKAQASRPMP 354
            K P RAI++E D+  F  S  Y   L F++  NE VRG  +S+++   D  ++ A+   L     W+DDIPP+ QPMRFGNKAFRDW+ RL   A    EGLL              AAA EL PYL  +FG+  RIDYGTGHE++F +++  L +   +A  D  A VL+ F +YL  +RRLQ  YMLEPAGSHGVWGLDDY CL FY GS+QL+    L PS +H D+ L A   DYLYL  V F++E+KA + FAE+SPMLNDIS + SW K+N+GML+LYEGEVL KLPVIQH LFG   P +W+PS   D      S   +           KAPW        AS   P
Sbjct:    8 KLPERAIFSEADMRKFIASDAYERHLIFIKHLNESVRGKKISDDFVVSD--SINAICDLLATLDSWIDDIPPIAQPMRFGNKAFRDWYDRLAQEAHRLHEGLL--------AQIGMQAAAVELSPYLIDSFGNRTRIDYGTGHETTFLLWICALHKVGFIAQADFPAIVLKVFHTYLTLMRRLQKTYMLEPAGSHGVWGLDDYQCLPFYFGSAQLIGQHVLAPSCVHDDSLLAAHSSDYLYLDAVRFVREVKAASSFAETSPMLNDISGVHSWEKINSGMLKLYEGEVLKKLPVIQHMLFGSLIPCSWVPSQSGDASYKPVSTAAVRAANANWEAMGKAPWAAAAGNLAASNDTP 352          
BLAST of NO19G02560 vs. NCBI_GenBank
Match: GAY04870.1 (strumpellin, putative [Pythium insidiosum])

HSP 1 Score: 325.9 bits (834), Expect = 1.800e-85
Identity = 175/367 (47.68%), Postives = 225/367 (61.31%), Query Frame = 0
Query:    6 HKTPVRAIYNETDLAAFHKSKTYADFLAFVRLCNERVRGIPVSEEYTHKDGPAVGALVAYLEEAWGWVDDIPPLQQPMRFGNKAFRDWHSRLMATAAAAVEGLLVASEKFVAGTSETAAAAAELLPYLTSAFGHPVRIDYGTGHESSFFVFLYGLFRFQVLALDDLTAAVLQGFRSYLRTLRRLQAVYMLEPAGSHGVWGLDDYFCLVFYLGSSQLVDHPTLTPSAIHSDATLQAQKDDYLYLAQVSFIKELKARAPFAESSPMLNDISALPSWSKVNTGMLRLYEGEVLGKLPVIQHFLFGDFFPATWIPSPPTDGP--LPNTSHTG---------LE--TTKAPWYGETQKAQASRPMPMSPLQK 360
            +K P RAI+ E DL AF  S+ Y   L FV+  N+ VRG+ +S +Y   +   V + +  + +   W+DD PP+QQPMRFGNKAFR ++ R++  +    E LL           E   A  EL+ Y    FG+ VRIDYGTGHE+SF V++  L +   L   D  A VL+ F +YL  +RRLQ +YMLEPAGSHGVWGLDDY CL FY GSSQL+ H  + P +IH D  L+    DYLYL  + FIKE+K+  PFAE+SPMLNDISALPSW K+N GML+LYEGEVL KLPVIQH +FG   P TW PS  +D    +P ++H G         LE  + KAPW    +   A++   MSP  +
Sbjct: 1119 YKQPTRAIFAERDLHAFIGSQPYEMILVFVKHLNQSVRGLSISSDYPVSEN--VRSAMDVVTQLHAWIDDFPPVQQPMRFGNKAFRSFYDRVIERSQELHEKLLPV---------ELHGAIVELMSYFNDCFGNRVRIDYGTGHETSFIVWMLCLHKIGFLKQQDFPAMVLRLFTAYLAMMRRLQKIYMLEPAGSHGVWGLDDYHCLPFYFGSSQLIGHQVIAPGSIHDDTLLENHHKDYLYLDAIKFIKEVKSGCPFAETSPMLNDISALPSWEKLNGGMLKLYEGEVLKKLPVIQHLVFGSLLPCTWQPSQSSDRTAFVPVSTHPGTGVRAPNFDLEGVSAKAPWVA-VETLAATKXTQMSPXHR 1473          
BLAST of NO19G02560 vs. NCBI_GenBank
Match: XP_012195544.1 (hypothetical protein SPRG_01788 [Saprolegnia parasitica CBS 223.65] >KDO33908.1 hypothetical protein SPRG_01788 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 324.7 bits (831), Expect = 3.900e-85
Identity = 168/331 (50.76%), Postives = 210/331 (63.44%), Query Frame = 0
Query:    9 PVRAIYNETDLAAFHKSKTYADFLAFVRLCNERVRGIPVSEEYTHKDGPAVGALVAYLEEAWGWVDDIPPLQQPMRFGNKAFRDWHSRLMATAAAAVEGLLVASEKFVAGTSETAAAAAELLPYLTSAFGHPVRIDYGTGHESSFFVFLYGLFRFQVLALDDLTAAVLQGFRSYLRTLRRLQAVYMLEPAGSHGVWGLDDYFCLVFYLGSSQLVDHPTLTPSAIHSDATLQAQKDDYLYLAQVSFIKELKARAPFAESSPMLNDISALPSWSKVNTGMLRLYEGEVLGKLPVIQHFLFGDFFPATWIPSPPTDGPLPNTSHTGLETTKAPW 340
            P RAI++E D+  F  S  Y   L F++  NE VRG  +++EYT    P V AL   L     W+D+IPP+ QPMRFGNKAFRDW+ RL A  A  +   L+AS     G  +   AA EL PYL  +FG+  RIDYGTGHE++F +++  L +   ++  D  A VL+ F +YL  +RRLQ  YMLEPAGSHGVWGLDDY CL FY GSSQL+    L PS +H D  L A   DYLYL  V F++E+KA + FAE+SPMLNDIS + SW K+N+GML+LYEGEVL KLPVIQH LFG   P +W+PS   D      S T +    A W
Sbjct:   10 PQRAIFSEADMRQFLASDAYERHLVFIKHLNESVRGKKLTDEYT--VSPNVEALCGLLATLNSWIDEIPPIDQPMRFGNKAFRDWYDRL-AQEAPKLHASLLAS----IGMQD---AAIELSPYLIDSFGNRTRIDYGTGHETTFMLWICTLHKIGFVSQADFPAVVLKVFHTYLTLMRRLQKTYMLEPAGSHGVWGLDDYQCLPFYFGSSQLIGQRNLAPSVVHDDGLLAAHSPDYLYLDAVKFVREVKAASSFAETSPMLNDISGVHSWEKINSGMLKLYEGEVLKKLPVIQHMLFGSLIPCSWVPSQSGDSSYTPVSTTAVRAANANW 330          
BLAST of NO19G02560 vs. NCBI_GenBank
Match: XP_008863936.1 (hypothetical protein H310_02265 [Aphanomyces invadans] >ETW07843.1 hypothetical protein H310_02265 [Aphanomyces invadans])

HSP 1 Score: 324.3 bits (830), Expect = 5.100e-85
Identity = 169/339 (49.85%), Postives = 218/339 (64.31%), Query Frame = 0
Query:    3 ASPHKTPVRAIYNETDLAAFHKSKTYADFLAFVRLCNERVRGIPVSEEY-THKDGPAVGALVAYLEEAWGWVDDIPPLQQPMRFGNKAFRDWHSRLMATAAAAVEGLLVASEKFVAGTSETAAAAAELLPYLTSAFGHPVRIDYGTGHESSFFVFLYGLFRFQVLALDDLTAAVLQGFRSYLRTLRRLQAVYMLEPAGSHGVWGLDDYFCLVFYLGSSQLVDHPTLTPSAIHSDATLQAQKDDYLYLAQVSFIKELKARAPFAESSPMLNDISALPSWSKVNTGMLRLYEGEVLGKLPVIQHFLFGDFFPATWIPSPPTDGPL-PNTSHTGLETTKAPW 340
            A+P+  P R+I++E DL  F +S  Y + L FV+  NE V+G  ++++    K+  +V AL++ L     W+D+IPP+ QPMRFGNKAFR W+ RL+  +    E +L          SE   AA EL PYL  +FG+ VRIDYGTGHE+SF ++L GL +   L+L D  A VL+ F +YL  +RRLQ VYMLEPAGSHGVWGLDDY CL FY GSSQLV    L PS +H DA L+  + +YLYL  V F++E+K+   FAE+SPMLNDIS + SW K+N GML+LYEGEVL K PVIQH LFG   P TW PS   +    P ++H G       W
Sbjct:    2 ATPYVIPQRSIFSEADLRQFLRSSAYENILRFVKHLNESVKGKKLTDDVPVSKNVESVMALLSTLN---AWIDEIPPIAQPMRFGNKAFRMWYDRLVDESPRLHEAIL--------EPSEVKPAAIELCPYLIDSFGNRVRIDYGTGHETSFIIWLCGLHKVGFLSLADFPAIVLKIFNAYLTVMRRLQKVYMLEPAGSHGVWGLDDYQCLPFYFGSSQLVGQTNLAPSCVHDDAMLELHRGEYLYLDAVRFVREVKSSGSFAETSPMLNDISGVHSWDKINGGMLKLYEGEVLQKFPVIQHLLFGSLLPCTWKPSQTGETSYKPVSTHPGTRVHAPNW 329          
BLAST of NO19G02560 vs. NCBI_GenBank
Match: XP_008907561.1 (hypothetical protein, variant 1 [Phytophthora parasitica INRA-310] >ETN07185.1 hypothetical protein, variant 1 [Phytophthora parasitica INRA-310])

HSP 1 Score: 319.7 bits (818), Expect = 1.300e-83
Identity = 177/374 (47.33%), Postives = 221/374 (59.09%), Query Frame = 0
Query:    7 KTPVRAIYNETDLAAFHKSKTYADFLAFVRLCNERVRGIPVSEEYTHKDGPAVGALVAYLEEAWGWVDDIPPLQQPMRFGNKAFRDWHSRLMATAAAAVEGLLVASEKFVAGTSETAAAAAELLPYLTSAFGHPVRIDYGTGHESSFFVFLYGLFRFQVLALDDLTAAVLQGFRSYLRTLRRLQAVYMLEPAGSHGVWGLDDYFCLVFYLGSSQLVDHPTLTPSAIHSDATLQAQKDDYLYLAQVSFIKELKARAPFAESSPMLNDISALPSWSKVNTGMLRLYEGEVLGKLPVIQHFLFGDFFPATWIPSPPTDGP---LPNTSHTGL-----------ETTKAPWYGETQKAQASRPMPMSPL--QKELLEK 365
            K P RAI+ + DL  F  S      L FV+  NE V+G  +S EY  +  P V   V  + E   W+DDIPP+QQPMRFGNKAFR ++ R++    A  E +L               A  EL  YL  +FG+ VRIDYGTGHE+SF V++  L +       D  A VLQ F SYL  +RRLQ +YMLEPAGSHGVWGLDDY CL FY GS+QL+    + P ++H D  L+A  ++YLYL  + FIKE+KA +PFAE+SPMLNDISALPSW K N GML+LYEGEVL KLPVIQH  FG  FP TW PS   D     +P ++H G             + +APW    +   A++   MS +   KE L K
Sbjct:   11 KEPSRAIFAQNDLRHFLGSPAQQMILVFVKHLNESVKGKRISSEY--EVSPNVQKAVDLINEINSWIDDIPPIQQPMRFGNKAFRTFYDRVVEKTPAMQEDML---------PENLRGAVTELAAYLDDSFGNRVRIDYGTGHETSFIVWMCCLHKLGFFKQSDFPALVLQLFTSYLALMRRLQKLYMLEPAGSHGVWGLDDYHCLPFYFGSAQLIGQHEIIPESVHDDGILEANHEEYLYLDAIKFIKEVKAGSPFAETSPMLNDISALPSWEKTNGGMLKLYEGEVLKKLPVIQHLRFGSLFPCTWTPSHQADDGSTYIPVSTHPGTGVRAPNFDLDGVSARAPWVA-VESLAATKDTTMSAMGHSKETLNK 372          
BLAST of NO19G02560 vs. NCBI_GenBank
Match: OQR99774.1 (serine/threonine-protein phosphatase 2A regulatory subunit B' [Thraustotheca clavata])

HSP 1 Score: 319.7 bits (818), Expect = 1.300e-83
Identity = 161/337 (47.77%), Postives = 209/337 (62.02%), Query Frame = 0
Query:    3 ASPHKTPVRAIYNETDLAAFHKSKTYADFLAFVRLCNERVRGIPVSEEYTHKDGPAVGALVAYLEEAWGWVDDIPPLQQPMRFGNKAFRDWHSRLMATAAAAVEGLLVASEKFVAGTSETAAAAAELLPYLTSAFGHPVRIDYGTGHESSFFVFLYGLFRFQVLALDDLTAAVLQGFRSYLRTLRRLQAVYMLEPAGSHGVWGLDDYFCLVFYLGSSQLVDHPTLTPSAIHSDATLQAQKDDYLYLAQVSFIKELKARAPFAESSPMLNDISALPSWSKVNTGMLRLYEGEVLGKLPVIQHFLFGDFFPATWIPSPPTDGPLPNTSHTGLETTKAPW 340
            A+ +K P RAI++E D+  F  S  Y   L F++  NE V+GI +++E+   +   + A+   L     W+D+IPP+ QPMRFGNKAFRDW+ RL   A      LL           E   A+ EL PYL  +FG+  RIDYGTGHES+F +++  L +   +A  D TA VL+ F +YL  +RRLQ  YMLEPAGSHGVWGLDDY CL FY GSSQL+    L PS +H D  L A   DYLYL  V F++++K+ + FAE+SPMLNDIS + SW K+N+GML+LYEGEV+ KLPVIQH LFG   P +W+PS   D      S   +    A W
Sbjct:    2 ATTYKIPERAIFSEADMRKFITSDAYKRHLVFIKHLNESVKGIKLTDEFPVSEN--IQAICDLLGLLNTWIDEIPPIAQPMRFGNKAFRDWYDRLAQEAPTLHANLL--------KPMELQEASLELSPYLIDSFGNRTRIDYGTGHESNFILWICALHKVGFIAQSDFTAVVLKVFHTYLTLMRRLQKTYMLEPAGSHGVWGLDDYQCLPFYFGSSQLIGQSELVPSCVHDDNILAAYSKDYLYLDAVKFVRDVKSASTFAETSPMLNDISGVHSWEKINSGMLKLYEGEVMKKLPVIQHMLFGTLIPCSWVPSQSGDSSYTPVSTAQVRAANASW 328          
BLAST of NO19G02560 vs. NCBI_GenBank
Match: XP_009515806.1 (hypothetical protein PHYSODRAFT_552275 [Phytophthora sojae] >EGZ28531.1 hypothetical protein PHYSODRAFT_552275 [Phytophthora sojae])

HSP 1 Score: 318.5 bits (815), Expect = 2.800e-83
Identity = 176/366 (48.09%), Postives = 222/366 (60.66%), Query Frame = 0
Query:    7 KTPVRAIYNETDLAAFHKSKTYADFLAFVRLCNERVRGIPVSEEYTHKDGPAVGALVAYLEEAWGWVDDIPPLQQPMRFGNKAFRDWHSRLMATAAAAVEGLLVASEKFVAGTSETAAAAAELLPYLTSAFGHPVRIDYGTGHESSFFVFLYGLFRFQVLALDDLTAAVLQGFRSYLRTLRRLQAVYMLEPAGSHGVWGLDDYFCLVFYLGSSQLVDHPTLTPSAIHSDATLQAQKDDYLYLAQVSFIKELKARAPFAESSPMLNDISALPSWSKVNTGMLRLYEGEVLGKLPVIQHFLFGDFFPATWIPSPPTDGP---LPNTSHTG---------LE--TTKAPWYGETQKAQASRPMPMSPLQ 359
            K P RAI+ + DL  F  S      L FV+  N+ V+G  +S EY  +  P V   V  + E   W+D+IPP+QQPMRFGNKAFR ++ R++    A  E +L           E   A  EL  YL  +FG+ VRIDYGTGHE+SF V++  L +       D  A VL+ F +YL  +RRLQ +YMLEPAGSHGVWGLDDY CL FY GSSQL+    + P ++H D+ L+A   +YLYL  + FIKE+KA +PFAE+SPMLNDISALPSW K N GML+LYEGEVL KLPVIQH  FG  FP TW PS   D     +P ++H G         LE  + KAPW    +   A++   MSPL+
Sbjct: 1153 KEPSRAIFAQRDLHHFLGSPAQQMILVFVKHLNKSVKGKRISSEY--EVSPNVQKAVELVNEINSWIDEIPPIQQPMRFGNKAFRTFYDRVVERTPAMQENML---------PEELRGAVIELAAYLDDSFGNRVRIDYGTGHETSFIVWMCCLHKLGFFKQSDFPALVLRLFTTYLALMRRLQKLYMLEPAGSHGVWGLDDYHCLPFYFGSSQLIGPHEILPDSVHDDSVLEANHKEYLYLDAIKFIKEVKAGSPFAETSPMLNDISALPSWEKTNGGMLKLYEGEVLKKLPVIQHLRFGTLFPCTWTPSHAADDGSTYIPVSTHPGTGVRAPNFDLEGVSAKAPWV-SVETLAATKDTAMSPLR 1506          
BLAST of NO19G02560 vs. NCBI_GenBank
Match: ETI43608.1 (hypothetical protein, variant 1 [Phytophthora parasitica P1569] >ETM43564.1 hypothetical protein, variant 1 [Phytophthora parasitica])

HSP 1 Score: 318.5 bits (815), Expect = 2.800e-83
Identity = 176/374 (47.06%), Postives = 222/374 (59.36%), Query Frame = 0
Query:    7 KTPVRAIYNETDLAAFHKSKTYADFLAFVRLCNERVRGIPVSEEYTHKDGPAVGALVAYLEEAWGWVDDIPPLQQPMRFGNKAFRDWHSRLMATAAAAVEGLLVASEKFVAGTSETAAAAAELLPYLTSAFGHPVRIDYGTGHESSFFVFLYGLFRFQVLALDDLTAAVLQGFRSYLRTLRRLQAVYMLEPAGSHGVWGLDDYFCLVFYLGSSQLVDHPTLTPSAIHSDATLQAQKDDYLYLAQVSFIKELKARAPFAESSPMLNDISALPSWSKVNTGMLRLYEGEVLGKLPVIQHFLFGDFFPATWIPSPPTDGP---LPNTSHTGL-----------ETTKAPWYGETQKAQASRPMPMSPL--QKELLEK 365
            K P RAI+ ++DL  F  S      L FV+  NE V+G  +S EY  +  P V   V  + E   W+DDIPP+QQPMRFGNKAFR ++ R++    A  E +L               A  EL  YL  +FG+ VRIDYGTGHE+SF V++  L +       D  A VL+ F SYL  +RRLQ +YMLEPAGSHGVWGLDDY CL FY GS+QL+    + P ++H D  L+A  ++YLYL  + FIKE+KA +PFAE+SPMLNDISALPSW K N GML+LYEGEVL KLPVIQH  FG  FP TW PS   D     +P ++H G             + +APW    +   A++   MS +   KE L K
Sbjct:   11 KEPSRAIFAQSDLRHFLGSPAQQMILVFVKHLNESVKGKRISSEY--EVSPNVQKAVDLINEINSWIDDIPPIQQPMRFGNKAFRTFYDRVVEKTPAMQEDML---------PDNLRGAVTELAAYLDDSFGNRVRIDYGTGHETSFIVWMCCLHKLGFFKQSDFPALVLRLFTSYLALMRRLQKLYMLEPAGSHGVWGLDDYHCLPFYFGSAQLIGQHEIIPESVHDDGILEANHEEYLYLDAIKFIKEVKAGSPFAETSPMLNDISALPSWEKTNGGMLKLYEGEVLKKLPVIQHLRFGSLFPCTWTPSHQADDGSTYIPVSTHPGTGVRAPNFDLDGVSARAPWVA-VESLAATKDTTMSAMGHSKETLNK 372          
The following BLAST results are available for this feature:
BLAST of NO19G02560 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
CBJ28173.13.900e-9354.60conserved unknown protein [Ectocarpus siliculosus][more]
XP_008620308.17.100e-8750.76hypothetical protein SDRG_15900 [Saprolegnia dicli... [more]
OQR95096.16.000e-8647.89serine/threonine-protein phosphatase 2A regulatory... [more]
GAY04870.11.800e-8547.68strumpellin, putative [Pythium insidiosum][more]
XP_012195544.13.900e-8550.76hypothetical protein SPRG_01788 [Saprolegnia paras... [more]
XP_008863936.15.100e-8549.85hypothetical protein H310_02265 [Aphanomyces invad... [more]
XP_008907561.11.300e-8347.33hypothetical protein, variant 1 [Phytophthora para... [more]
OQR99774.11.300e-8347.77serine/threonine-protein phosphatase 2A regulatory... [more]
XP_009515806.12.800e-8348.09hypothetical protein PHYSODRAFT_552275 [Phytophtho... [more]
ETI43608.12.800e-8347.06hypothetical protein, variant 1 [Phytophthora para... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniR034ncniR034Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR039ngnoR039Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO19G02560.1NO19G02560.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|672903gene_7657Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_101538g1gene6702Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO19G02560.1NO19G02560.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO19G02560 ID=NO19G02560|Name=NO19G02560|organism=Nannochloropsis oceanica|type=gene|length=3595bp
AGGAGAGCGAGCAGGCAATAGAGCTCACGGAGGACAAGCTCGAGAACCAC
ATGTATCATAGAAGCATGCATAGAAACACAGGCCGCTGCACTCCCTTCCT
GCTTTCACTTTATCACTTCAGCCCTTTGCGTCGTTGTCAGCAGAATGTCG
GCGTCGCCACACAAGACGCCTGTACGGGCCATTTACAATGAGACCGACCT
AGCGGCCTTCCACAAGAGCAAGgtaaggaaggaaacggaagaggaggcag
cagaatgagaactgtgcagtgaaatgcttgagagaatgtgaagaggttct
atgttcaagggaaatttatgtcggtaagctgcagccgacggaagcatttg
ttccgtcatcaacctacacatgttcctcctccctttatcccctcccttca
tggtcctcgcatttctttcggtctgttgccttttctcgaagACCTACGCC
GACTTCTTGGCTTTTGTCCGTCTGTGCAATGAGCGGGTGCGCGGCATTCC
CGTCAGTGAGGAGTACACACACAAGGATGGgtaagggggaagggagggag
ggagggagggagggagggaagaggaggtccatagagacggatgattgtgt
ttatgtttcctcatgatcacggttcacataatgatgcctgatttctccct
tcatttcctccgtcctttcattcatttctttcatttcctccgtccctctc
ccgttgctcagCCCTGCCGTCGGTGCTTTGGTGGCTTACTTGGAGGAGGC
TTGGGGGTGGGTAGATGACATTCCGCCGTTACAGCAGgtgagaaagagag
gggaaagggggggggaggagaggaagacagggggaagacaggggggccgg
tgggggaggggtaagaatgtggcggaagggagaaagcattcgtccctgca
gcaggtgagaaaaagagaggcgtgggggggggggggggggggaggcgtag
gaaagtgagggatgataatggggaatagacgtacccgcatggtatctgtt
gcctgctatttgttgttcttgctgcccaccaccctccctccctccctccc
tccctccctccctccctccctccctccctccctccctccagCCCATGCGC
TTCGGGAACAAGGCTTTTCGAGACTGGCACTCCCGATTGATGGCCACAGC
AGCGGCAGCAGTTGAGGGGTTGCTCGTGGCGTCAGAGgtgaggactgcag
ggagggagagagggagggagggagggagaggggggggaatatacgacagc
aggtaaccaagttcgaacttccttacactcaagtttccacttcctcctcc
ctccctccctccctccctccctccctccctccctccctcccttcccccct
ttctcacctagAAATTTGTTGCTGGCACGTCGGAAACTGCTGCTGCTGCT
GCTGAGCTCCTTCCCTACCTCACCTCCGCCTTTGGCCATCCCGTCCGCAT
CGACTATGGCACTGgtacccctccccccctccctccctccgtccctctct
ccctccgtccctccctcccatttctttctctctgatcgtccccctctctt
tttgcacgcgcagattctcgaataaagtcctcacctttccactccatgcc
cctcccttccttcctccctccctccctcctttcagGCCACGAATCCTCTT
TCTTCGTCTTCCTTTACGGCCTCTTCCGATTTCAAGTCCTGGCCCTCGAT
GACCTCACGgtaccttcccttcctccctccttccctccctccctcccttc
ttcaatcccatccaccaaagagacacactcccctccctccctccctccct
ccctccctccctccctccctccctccctcccccagGCCGCCGTCCTCCAG
GGCTTCCGCTCTTACCTCCGGACCCTGCGTCGCCTGCAGGCAGTATATAT
GCTCGAACCGGCCGgtgagggggagggagggagggagggagtgagggagg
gagggagggaaggggagaagtaactatttgaggagtgtagcctcggtctt
tcccatctgaggaagggagggagggagggagaatgggaaggagggaggga
aggaagcaaatcatgtccaggcaggcggtgtgtagtgatgcctcaagacg
ttggccctccctccctccctccctccctccctccctccctccctcagGCT
CCCACGGCGTCTGGGGCCTCGACGATTATTTTTGTCTCGTTTTCTACTTG
GGCAGCTCCCAGCTCGTGGACCATCCCACCCTCACCCCTTCTGCCATTCA
CAGgtgcaggagggagggagggagggagggagggagggagggagggaggg
agggaaggaggggagggaggacgggacggagggaggggaagggaagggaa
gcaatgcaagtatcagtcactcactctttctgacatccctccctccttcc
ctccctccctccttccctccctccctccttccctccctcccctccccagC
GACGCCACCCTCCAAGCTCAAAAAGACGACTATCTCTACCTCGCGCAAGT
CTCCTTTATAAAAGAGCTCAAGGCCCGCGCACCCTTTGCTGAATCCTCCC
CAATGCTCAACGATATCTCTGCCCTCCCTTCCTGGTCAAAGgtagtcctc
gccctcgccctccctccctccctccttccctccctccttgcgccgaaatg
caatcgacatccatgcccgccactcccttcctccttccctccctccctcc
ctccctccctccttcagGTCAACACCGGCATGCTCCGCCTCTACGAAGGC
GAGGTGCTGGGGAAGCTCCCCGTCATCCAGCATTTTCTCTTTGGgtgggt
ccctccctccctccctccctccctccctccctccctccctccctgtgaca
ccctccccctccaagccttttacatgcatcaccaccttcctctccctccc
tccctccctccctccctccctccctcccccagTGACTTTTTCCCCGCCAC
ATGGATTCCCTCCCCGCCCACCGACGGCCCACTTCCCAACgtacgtgctc
tccctccctccctccctccctcccttcctccctccttctatccccctcta
ttcctcactcacttccttcctctccctccctccctccctccctccctccc
tccagACCTCGCACACGGGTCTCGAAACGACCAAAGCCCCCTGGTACGGA
GAAACACAGAAGgtagggagggagggaaggagggagggagggagggaggg
agggagggagggagggaggataggagggagaaaggggggagggagggagg
gaaggaacgtgggagggaaggagagaagaaagaaatgaaagcccaaagga
gaaaaggcatccgattgtcgatgctaatgtccctccctccctccctccct
ccctcctttcctccctccctccttccctccctccctccttccctccctcc
ctccctcccttccttccttcctcagGCCCAAGCGTCACGGCCAATGCCCA
TGTCGCCCCTGCAAAAAGAGCTCCTGGAGAAGGCAAAGACGGAGGAGGAG
AGGGAGGAGGAGGAGGAGGAGGAGGAAAAGGGAGGGGGGGAAGGAAGGGG
GGAAGGAGGGAAGTGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAG
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protein sequence of NO19G02560.1

>NO19G02560.1-protein ID=NO19G02560.1-protein|Name=NO19G02560.1|organism=Nannochloropsis oceanica|type=polypeptide|length=392bp
MSASPHKTPVRAIYNETDLAAFHKSKTYADFLAFVRLCNERVRGIPVSEE
YTHKDGPAVGALVAYLEEAWGWVDDIPPLQQPMRFGNKAFRDWHSRLMAT
AAAAVEGLLVASEKFVAGTSETAAAAAELLPYLTSAFGHPVRIDYGTGHE
SSFFVFLYGLFRFQVLALDDLTAAVLQGFRSYLRTLRRLQAVYMLEPAGS
HGVWGLDDYFCLVFYLGSSQLVDHPTLTPSAIHSDATLQAQKDDYLYLAQ
VSFIKELKARAPFAESSPMLNDISALPSWSKVNTGMLRLYEGEVLGKLPV
IQHFLFGDFFPATWIPSPPTDGPLPNTSHTGLETTKAPWYGETQKAQASR
PMPMSPLQKELLEKAKTEEEREEEEEEEEKGGGEGRGEGGK*
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Synonyms
Publications