NO19G02470, NO19G02470 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO19G02470 vs. NCBI_GenBank
Match: CBJ32671.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 302.8 bits (774), Expect = 1.300e-78 Identity = 145/219 (66.21%), Postives = 174/219 (79.45%), Query Frame = 0 Query: 5 DTEATSEVEGSG-GKMVKAERIILVRHGESMGNVDEGTYVVVPDWKVPLTKKGHQDGHIAGLRIKELVGEKPLYIYCSPYMRTKQTLARIVECLEGNTIVGVREEPRLTEQAFGNFQNVEGVRYSKAERARFGRFYYRFPDGESGLDVYSRVTSFLSTLYGDFTHRAIKDKDLNVVVVTHGLTLRLLIMRWFQYSISDFEESLNPPNGGLVVINRLTDE 223 D E+ G G ++VK ERII+VRHGES+GN DE TYV VPDWK+PLTKKG +G AG +IKE +G+KPL+IY SPY+RTKQTLA +VE + N IVGVREEPRLTEQ FGNFQN+ + SKAERARFGRFYYRFP GESGLDVY+R TSF++T++ DF + +I DLNV++VTHGLTLRLL+MRWFQYSI+DFEE+LNP NG VV+ R E Sbjct: 100 DQESLGLFSGDGKRRVVKPERIIIVRHGESLGNRDESTYVHVPDWKIPLTKKGFGEGQKAGEKIKEYIGDKPLFIYTSPYLRTKQTLAGMVEAFDTNYIVGVREEPRLTEQQFGNFQNLATIVNSKAERARFGRFYYRFPQGESGLDVYNRATSFIATMFRDFANESIARDDLNVIIVTHGLTLRLLVMRWFQYSIADFEETLNPENGSFVVMERKEKE 318
BLAST of NO19G02470 vs. NCBI_GenBank
Match: XP_005823921.1 (hypothetical protein GUITHDRAFT_89880 [Guillardia theta CCMP2712] >EKX36941.1 hypothetical protein GUITHDRAFT_89880 [Guillardia theta CCMP2712]) HSP 1 Score: 226.5 bits (576), Expect = 1.200e-55 Identity = 107/231 (46.32%), Postives = 153/231 (66.23%), Query Frame = 0 Query: 19 MVKAERIILVRHGESMGNVDEGTYVVVPDWKVPLTKKGHQDGHIAGLRIKELVGEKPLYIYCSPYMRTKQTLARIVECLEGNTIVGVREEPRLTEQAFGNFQNVEGVRYSKAERARFGRFYYRFPDGESGLDVYSRVTSFLSTLYGDFTHRAIKDKDLNVVVVTHGLTLRLLIMRWFQYSISDFEESLNPPNGGLVVINRLTDEKGNQWYEMDDASCELIGFQKRHTKGSL 250 M + +RIILVRHGES GN E Y +PDWK+ L +G + AG +IKE+V E+P+Y+Y SPY R QT ++++ L+ I G+REEPR+ EQ FGN QN+ +R +K ER++FGRF+YRFP+GE+GLDVY RV+ F+ TL D + NV+++THGL LRL +MRWFQ+S+ FE + NPPN G+ V+ RL ++ Y + + ++I ++ TK L Sbjct: 158 MPRPKRIILVRHGESEGNTQEILYTQIPDWKIALNPRGLRQAWDAGTKIKEIVKEEPVYVYHSPYQRAVQTCRQLIQALDYEQIQGLREEPRIAEQQFGNLQNLNTIRQNKHERSKFGRFFYRFPNGEAGLDVYIRVSGFIGTLRRDHL-----QEGSNVIIITHGLALRLFLMRWFQWSVEQFEATHNPPNCGIAVMERLPEDGR---YRLTQETLDVILIEEVFTKYDL 380
BLAST of NO19G02470 vs. NCBI_GenBank
Match: XP_002293928.1 (hypothetical protein THAPSDRAFT_17193, partial [Thalassiosira pseudonana CCMP1335] >EED88937.1 hypothetical protein THAPSDRAFT_17193, partial [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 221.9 bits (564), Expect = 2.800e-54 Identity = 107/199 (53.77%), Postives = 140/199 (70.35%), Query Frame = 0 Query: 23 ERIILVRHGESMGNVDEGTYVVVPDWKVPLTKKGHQDGHIAGLRIKELVGEK--PLYIYCSPYMRTKQTLARIVECLEGNTIVGVREEPRLTEQAFGNFQNVEGVRYSKAERARFGRFYYRFPDGESGLDVYSRVTSFLSTLYGDFTHRAIKDKD---LNVVVVTHGLTLRLLIMRWFQYSISDFEESLNPPNGGLVVI 217 +RIIL+RHGES GNVD+ YV DW++P+T G + AG +++E + EK + Y SPY+RTKQTL I+ + N I+ V EEPR++EQ GNFQNV+ V +KAER++FGRF+YRFP GE+GLDVYSRV+SF+ TL D + D LN+V+VTHGL LRL +MRWFQ+S+ DFEES NP N LV + Sbjct: 2 KRIILIRHGESQGNVDQNAYVTTADWRIPITNLGKKQAQEAGKQLREKISEKDAKVVFYFSPYLRTKQTLDEILPYFDDNEILSVLEEPRISEQQIGNFQNVQQVLDAKAERSKFGRFFYRFPSGEAGLDVYSRVSSFIPTLVRDCDQYVREGHDLDNLNLVIVTHGLALRLFLMRWFQFSVHDFEESQNPENCELVTM 200
BLAST of NO19G02470 vs. NCBI_GenBank
Match: XP_005824704.1 (hypothetical protein GUITHDRAFT_158572 [Guillardia theta CCMP2712] >EKX37724.1 hypothetical protein GUITHDRAFT_158572 [Guillardia theta CCMP2712]) HSP 1 Score: 208.0 bits (528), Expect = 4.300e-50 Identity = 94/188 (50.00%), Postives = 129/188 (68.62%), Query Frame = 0 Query: 26 ILVRHGESMGNVDEGTYVVVPDWKVPLTKKGHQDGHIAGLRIKELVGEKPLYIYCSPYMRTKQTLARIVECLEGNTIVGVREEPRLTEQAFGNFQNVEGVRYSKAERARFGRFYYRFPDGESGLDVYSRVTSFLSTLYGDFTHRAIKDKDLNVVVVTHGLTLRLLIMRWFQYSISDFEESLNPPNGGL 214 +LVRHGES GN D+ Y V DW++ LT++G Q AG ++KEL G ++ Y SPY RT QT I++ + G+REEPR+ EQ FGN QN+ ++ SK ER ++GRF+YRFPDGE+GLDVY+RVTSF+ TL D T ++D V++VTHGL LRL +M WFQ+++ +FE + NP N G+ Sbjct: 1 MLVRHGESEGNSDDSVYTRVSDWRISLTQRGRQQARAAGHKLKELAGASDVFFYYSPYYRTVQTCEEILQAFNPEQVRGMREEPRMAEQQFGNLQNLTSIKKSKDERHKYGRFFYRFPDGEAGLDVYTRVTSFIDTLRRDHT-----EEDCTVIIVTHGLALRLFLMAWFQWTVEEFEMTQNPNNCGI 183
BLAST of NO19G02470 vs. NCBI_GenBank
Match: XP_010255254.1 (PREDICTED: phosphoglycerate mutase-like protein AT74 [Nelumbo nucifera]) HSP 1 Score: 200.7 bits (509), Expect = 6.800e-48 Identity = 99/206 (48.06%), Postives = 136/206 (66.02%), Query Frame = 0 Query: 21 KAERIILVRHGESMGNVDEGTYVVVPDWKVPLTKKGHQDGHIAGLRIKELVGEK-----PLYIYCSPYMRTKQTLARIVECLEGNTIVGVREEPRLTEQAFGNFQNVEGVRYSKAERARFGRFYYRFPDGESGLDVYSRVTSFLSTLYGD-----FTHRAIKDKDLNVVVVTHGLTLRLLIMRWFQYSISDFEESLNPPNGGLVVI 217 + RIILVRHG+S GNVDE Y VPD K+ LTKKG Q+ G+RI+E++ + +Y Y SPY RT +TL + + E + I GVREEPRL EQ FGNFQ+ E +R KA R +GRF+YRFP+GES DVY R+T F TL D F ++ ++N+V+V+HGLTLR+ +MRW+++++ FE N NGG++V+ Sbjct: 97 RPRRIILVRHGQSEGNVDESAYTRVPDPKIGLTKKGMQEAEDCGIRIREMIEKDGAPDWKVYFYVSPYKRTLETLQGLGKAFEPSRIAGVREEPRLREQDFGNFQDREKMRVEKAIRVLYGRFFYRFPNGESAADVYDRITGFRETLRADIDIGRFQPPGQRNPNMNLVIVSHGLTLRVFLMRWYKWTVEQFEGLNNFSNGGMIVM 302
BLAST of NO19G02470 vs. NCBI_GenBank
Match: XP_002291945.1 (predicted protein, partial [Thalassiosira pseudonana CCMP1335] >EED90796.1 predicted protein, partial [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 200.3 bits (508), Expect = 8.900e-48 Identity = 96/215 (44.65%), Postives = 143/215 (66.51%), Query Frame = 0 Query: 23 ERIILVRHGESMGNVDEGTYVVVPDWKVPLTKKGHQDGHIAGLRIK---ELVGEK----------------PLYIYCSPYMRTKQTLARIVECLEGNTIVGVREEPRLTEQAFGNFQNVEGVRYSKAERARFGRFYYRFPD-GESGLDVYSRVTSFLSTLYGDFTHRAIKDKDLNVVVVTHGLTLRLLIMRWFQYSISDFEESLNPPNGGLVVIN 218 +RIIL+RHGES+GNVDE Y DW++PLT G + +AG ++ +G K +Y Y SPY+RT+QTL I+ ++ + +VG+RE+PR+ EQ FGNFQ+ ++ +KA+R+ FGRF+YRFPD GESG DVY+RV+ F+ T+ D + A+ D ++ + +VTHGL +RL +MR+FQY++ +FE S NP NG +VV++ Sbjct: 1 QRIILIRHGESLGNVDERAYSTTADWRIPLTNHGREQARLAGEKVSSHLSCLGSKLREKGDDNGDGSNHSGKVYFYVSPYLRTRQTLREILREVDKDRVVGIREDPRIAEQQFGNFQSHHSIQDNKAQRSDFGRFFYRFPDGGESGFDVYNRVSGFIGTMQRDASD-ALND-NMTICIVTHGLAMRLFLMRFFQYTVHEFERSYNPKNGRVVVLD 213
BLAST of NO19G02470 vs. NCBI_GenBank
Match: XP_003057908.1 (predicted protein [Micromonas pusilla CCMP1545] >EEH57859.1 predicted protein [Micromonas pusilla CCMP1545]) HSP 1 Score: 199.9 bits (507), Expect = 1.200e-47 Identity = 102/206 (49.51%), Postives = 136/206 (66.02%), Query Frame = 0 Query: 21 KAERIILVRHGESMGNVDEGTYVVVPDWKVPLTKKGHQDGHIAGLRIKELVG-EKPLYIYCSPYMRTKQTLARIVECLEGNTIVGVREEPRLTEQAFGNFQNVEGVRYSKAERARFGRFYYRFPDGESGLDVYSRVTSFLSTLYGDFTH-------RAIKDKDLNVVVVTHGLTLRLLIMRWFQYSISDFEESLNPPNGGLVVINR 219 + +RIIL+RH ES GNVDE Y PD ++ LT+KG Q AG ++K ++G + +Y Y SPYMRT+QTL I + + + ++GVREEPR+ EQ FGNFQ+V G+ K ER RFGRF++RFP+GES DVY RVTSF TL D + +D VV+VTHGLTLR+ +MRW+++S+ FE N NG LVV+ R Sbjct: 21 RPKRIILIRHAESEGNVDETVYQRKPDHRIELTEKGKQQARDAGEKLKAILGPNESVYAYVSPYMRTEQTLYEIGQAIGTHRVLGVREEPRMREQDFGNFQDV-GMAELKRERQRFGRFFFRFPNGESAADVYDRVTSFRETLRNDMHFGRFNCDVTGCRTEDCTVVIVTHGLTLRVFLMRWYKWSVEMFERCRNARNGELVVMER 225
BLAST of NO19G02470 vs. NCBI_GenBank
Match: XP_006829094.1 (phosphoglycerate mutase-like protein AT74H [Amborella trichopoda] >ERM96510.1 hypothetical protein AMTR_s00001p00262580 [Amborella trichopoda]) HSP 1 Score: 199.5 bits (506), Expect = 1.500e-47 Identity = 100/213 (46.95%), Postives = 137/213 (64.32%), Query Frame = 0 Query: 14 GSGGKMVKAERIILVRHGESMGNVDEGTYVVVPDWKVPLTKKGHQDGHIAGLRIKELV-----GEKPLYIYCSPYMRTKQTLARIVECLEGNTIVGVREEPRLTEQAFGNFQNVEGVRYSKAERARFGRFYYRFPDGESGLDVYSRVTSFLSTLYGD-----FTHRAIKDKDLNVVVVTHGLTLRLLIMRWFQYSISDFEESLNPPNGGLVVI 217 GS + RIILVRHG+S GNVDE Y +PD K+ LT+KG +D G +I+E++ + +Y Y SPY RT QTL + E + I GVREEPRL EQ FGNFQ+ E +R KA+R R+GRF+YRFPDGES DVY R+T F TL D F + ++N+++V+HGLTLR+ +MRW+++++ FE N NGG++V+ Sbjct: 70 GSSCPCPRPRRIILVRHGQSEGNVDESAYTRIPDPKICLTEKGWRDAEEVGKQIREMILSDGADDWKVYFYVSPYRRTLQTLEGLGRAFELHRIAGVREEPRLREQDFGNFQDREKMRVGKADRLRYGRFFYRFPDGESAADVYDRITGFRETLRSDIDIGRFQPPGERTPNMNLIIVSHGLTLRVFLMRWYKWTVEQFEGLNNFGNGGMLVM 282
BLAST of NO19G02470 vs. NCBI_GenBank
Match: XP_003517475.1 (PREDICTED: phosphoglycerate mutase-like protein AT74H [Glycine max] >KRH77570.1 hypothetical protein GLYMA_01G221400 [Glycine max]) HSP 1 Score: 198.7 bits (504), Expect = 2.600e-47 Identity = 98/208 (47.12%), Postives = 130/208 (62.50%), Query Frame = 0 Query: 21 KAERIILVRHGESMGNVDEGTYVVVPDWKVPLTKKGHQDGHIAGLRIKELVGEK-----PLYIYCSPYMRTKQTLARIVECLEGNTIVGVREEPRLTEQAFGNFQNVEGVRYSKAERARFGRFYYRFPDGESGLDVYSRVTSFLSTL-----YGDFTHRAIKDKDLNVVVVTHGLTLRLLIMRWFQYSISDFEESLNPPNGGLVVINR 219 + RIILVRHGES GNVDE Y +PD K+ LT+KG G RIK+++ +Y Y SPY RT QTL + + + I G REEPR+ EQ FGNFQN E +R KA R R+GRF+YRFPDGES DVY R+T F TL G + K D+N+V+V+HGLTLR+ +MRW+++++ FE N NG ++V+ + Sbjct: 72 RPRRIILVRHGESEGNVDESVYTRIPDPKISLTEKGKVQAEECGKRIKQMIENDHDQHWQVYFYVSPYRRTLQTLQHLARPFQRSRIAGFREEPRIREQDFGNFQNREKMRVEKALRQRYGRFFYRFPDGESAADVYDRITGFRETLRTDINIGRYQPPGEKKTDMNLVIVSHGLTLRVFLMRWYKWTVQQFESLNNMGNGNMLVMEK 279
BLAST of NO19G02470 vs. NCBI_GenBank
Match: XP_003078295.2 (Phosphoglycerate/bisphosphoglycerate mutase,active site [Ostreococcus tauri] >CEF97227.1 Phosphoglycerate/bisphosphoglycerate mutase,active site [Ostreococcus tauri] >OUS43987.1 histidine phosphatase superfamily [Ostreococcus tauri]) HSP 1 Score: 198.7 bits (504), Expect = 2.600e-47 Identity = 94/202 (46.53%), Postives = 128/202 (63.37%), Query Frame = 0 Query: 24 RIILVRHGESMGNVDEGTYVVVPDWKVPLTKKGHQDGHIAGLRIKELVGEK----PLYIYCSPYMRTKQTLARIVECLEGNTIVGVREEPRLTEQAFGNFQNVEGVRYSKAERARFGRFYYRFPDGESGLDVYSRVTSFLSTLYGDFTHRAIKDKDLNVVVVTHGLTLRLLIMRWFQYSISDFEESLNPPNGGLVVINRLTD 222 RI+LVRHGES GNVDE Y PD +V LT GH G R+++++ E L+ Y SPY R+K+T I + +G I+GVREEP+L EQ FGNFQ+ E + K ER RFGRF+YRFP+GESG DVY R+T F + D + D N+++ THGLTLRL +MRWF ++++++E NP N +++ R D Sbjct: 30 RIVLVRHGESFGNVDESEYTRTPDSQVRLTATGHNQAETTGRRLRDMMDETGEDYKLFFYLSPYRRSKETAIGIAKAFDGRRILGVREEPQLREQDFGNFQDYEAKQAEKRERHRFGRFFYRFPNGESGADVYDRITMFSDHMVRDIDAGRFPE-DTNMILCTHGLTLRLFLMRWFHWTVAEYERIANPSNSQPIILERRDD 230 The following BLAST results are available for this feature:
BLAST of NO19G02470 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO19G02470 ID=NO19G02470|Name=NO19G02470|organism=Nannochloropsis oceanica|type=gene|length=3611bpback to top protein sequence of NO19G02470.2 >NO19G02470.2-protein ID=NO19G02470.2-protein|Name=NO19G02470.2|organism=Nannochloropsis oceanica|type=polypeptide|length=312bpback to top protein sequence of NO19G02470.1 >NO19G02470.1-protein ID=NO19G02470.1-protein|Name=NO19G02470.1|organism=Nannochloropsis oceanica|type=polypeptide|length=312bpback to top Synonyms
Publications
|