NO19G02460, NO19G02460 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO19G02460 vs. NCBI_GenBank
Match: CEL96685.1 (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 201.4 bits (511), Expect = 4.100e-48 Identity = 111/215 (51.63%), Postives = 146/215 (67.91%), Query Frame = 0 Query: 104 ALYQSGGLHHVQGINVADVFQQVEAKITELGPWGYVLFSVIYIVAEILAIPAVPLSASSGYLFGLINGTAIVVLSATIAAATSFLIGRTLLRSTVEKWMEGYPKFRALDKAIADEGFKIILLLRLSPIFPFALSNYMYGLTAVDFWPYFWATLIGFFPGTLAYVYSGYVGRSLTEGQGMGGAPWYVYAGGIIGLGLVGKLVGDAANKAIGEYEEK 319 ALY GG +GI + +I E GP GYV F ++Y VAEI A+PA+PL+AS+GYLFG++ GT V ++AT+AA+ SFL+GRTLLR V+++ PKFRA+DK + EGFK+I LLRLSP PFA+SNY+Y LT+V F Y A+L+GF PGTLAYVYSG +GRSL G P+ V ++GL K+V D +N AI EY+E+ Sbjct: 92 ALY--GGSIDKEGIVATKFLNEAVRRIEEQGPLGYVYFVLLYTVAEIFAVPAIPLTASAGYLFGIVPGTITVCIAATMAASVSFLLGRTLLRPRVKEFFAENPKFRAVDKVVEKEGFKMIFLLRLSPFLPFAISNYLYSLTSVKFVDYALASLLGFIPGTLAYVYSGVLGRSLVSSVGGEKIPYLVPGLVLVGLFAFLKVVSDLSNAAIREYQEE 304
BLAST of NO19G02460 vs. NCBI_GenBank
Match: GAX12724.1 (hypothetical protein FisN_15Hh203 [Fistulifera solaris]) HSP 1 Score: 198.7 bits (504), Expect = 2.700e-47 Identity = 104/210 (49.52%), Postives = 148/210 (70.48%), Query Frame = 0 Query: 115 QGIN--VADVFQQVEAKI---TELGPWGYVLFSVIYIVAEILAIPAVPLSASSGYLFGLINGTAIVVLSATIAAATSFLIGRTLLRSTVEKWMEGYPKFRALDKAIADEGFKIILLLRLSPIFPFALSNYMYGLTAVDFWPYFWATLIGFFPGTLAYVYSGYVGRSLTEGQGMGGAPWYVYAGGIIGLGLVGKLVGDAANKAIGEYEEKE 320 QG++ AD Q ++A I E GP G ++F V+Y +AEILA+PA PL+ S GYLFG G+AIV+++AT+AA+ +F IG+T LR +E+ + K +DKAI EGF+++LL+RLSP+FPFALSNY+YG ++++F PYF+ TL+GF PGT+ VY+G VG++LT G G PWYVYA G +GLGL+ KL+ D A + E+ + Sbjct: 116 QGLSDLTADPQQSLQAVIDFVQEAGPMGPLIFGVVYFLAEILAVPATPLTLSVGYLFGFPMGSAIVLVAATLAASAAFFIGKTFLRQWIEQLLAENAKLAKIDKAIGREGFRLLLLVRLSPLFPFALSNYVYGASSIEFVPYFFGTLLGFAPGTMGIVYAGMVGKALTTGD--GSQPWYVYAVGCLGLGLLMKLITDVAGNIVNSMEDDD 323
BLAST of NO19G02460 vs. NCBI_GenBank
Match: GAX12104.1 (hypothetical protein FisN_15Lh203 [Fistulifera solaris]) HSP 1 Score: 198.7 bits (504), Expect = 2.700e-47 Identity = 104/208 (50.00%), Postives = 148/208 (71.15%), Query Frame = 0 Query: 115 QGIN--VADVFQQVEAKI---TELGPWGYVLFSVIYIVAEILAIPAVPLSASSGYLFGLINGTAIVVLSATIAAATSFLIGRTLLRSTVEKWMEGYPKFRALDKAIADEGFKIILLLRLSPIFPFALSNYMYGLTAVDFWPYFWATLIGFFPGTLAYVYSGYVGRSLTEGQGMGGAPWYVYAGGIIGLGLVGKLVGDAANKAIGEYEE 318 QG++ +AD Q ++A I + GP G ++F +Y++AEILA+PA PL+ S+GYLFG G+AIV+++AT+AA+ +F IG+T LR VE+ + K +DKAI EGF+++LL+RLSP+FPFALSNY+YG ++++F PYF+ TL GF PGT+ VY+G VGR+LT G G PWYVYA G +GLGL+ KL+ D A + E+ Sbjct: 122 QGLSDLMADPKQSLQAVIDYVQDAGPMGPLIFGAVYLLAEILAVPATPLTLSAGYLFGFPMGSAIVLVAATLAASAAFFIGKTFLRQWVEQILADNAKLAKIDKAIGREGFRLLLLVRLSPLFPFALSNYVYGASSIEFVPYFFGTLFGFAPGTMGMVYAGMVGRALTTGDGT--QPWYVYAVGCLGLGLLLKLITDVAGNIVNSMED 327
BLAST of NO19G02460 vs. NCBI_GenBank
Match: EJK47375.1 (hypothetical protein THAOC_33907 [Thalassiosira oceanica]) HSP 1 Score: 191.0 bits (484), Expect = 5.500e-45 Identity = 110/234 (47.01%), Postives = 156/234 (66.67%), Query Frame = 0 Query: 91 LGIVLPTLLAICAALYQSGGLHHVQGI--NVADVFQQVEAKITELGPWGYVL-FSVIYIVAEILAIPAVPLSASSGYLFGLINGTAIVVLSATIAAATSFLIGRTLLRSTVEKWMEGYPKFRALDKAIADEGFKIILLLRLSPIFPFALSNYMYGLTAVDFWPYFWATLIGFFPGTLAYVYSGYVGRSLTEGQGMGGAPWYVYAGGI-IGLGLVGKLVGDAANKAIGEYEEKEK 321 + IV +A+ A L GL V + + F ++ + + + VL F + Y++AEILAIPA PL+A+SGYLFG GTA + SA IAA+ SF+IG+TLLR VE ++ PKFR++D+AI EGFK+++LLRLSP+FPFALSNY+YG +++ F YF+ T++GF PGT AYVY G +G+ LT G G PWYVYAGG+ + +GL+ K++GD A I E+ ++ Sbjct: 116 VAIVFAATIALLAKLGDELGLPAVSQFVSDPSGSFDEIISSLDGMDKQRAVLYFGIFYVLAEILAIPAFPLTAASGYLFGAFPGTATCLFSAAIAASVSFVIGKTLLRGYVEDVLDENPKFRSMDRAIEKEGFKLMVLLRLSPLFPFALSNYLYGASSIRFPSYFFGTILGFAPGTFAYVYGGVIGKELTVG-GDSAQPWYVYAGGMAVIVGLI-KVIGDVATSVIDAMEDDDE 347
BLAST of NO19G02460 vs. NCBI_GenBank
Match: XP_002296454.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED87150.1 predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 189.5 bits (480), Expect = 1.600e-44 Identity = 116/243 (47.74%), Postives = 154/243 (63.37%), Query Frame = 0 Query: 85 NKTLLALGIVLPTLLAICAALYQSGGLHHVQGINV---------ADVFQQVEAKITELGPW-GYVLFSVIYIVAEILAIPAVP-LSASSGYLFGLINGTAIVVLSATIAAATSFLIGRTLLRSTVEKWMEGYPKFRALDKAIADEGFKIILLLRLSPIFPFALSNYMYGLTAVDFWPYFWATLIGFFPGTLAYVYSGYVGRSLTEGQGMGGAPWYVYAGGIIGLGLVGKLVGDAANKAIGEYE 317 +K +L G VL A A+ S L GI++ + F+ + + + P G + FS Y++AEILAIPAVP L+ASSGYLFGL+ GT + SA+IAA+ SF+IGRTLLR VE + PKF+ +D AI EGFK++LLLRLSP+FPFALSNY+YG +++ F PYF+ TL+GF PGT AYVY+G VGR+LT PWYVY GG+ + + K+ GD A+ I E Sbjct: 141 SKWILTGGAVLVIAAAYALAVTMSADL----GIDLEWGQLTKDPSSAFETILHSLEKFDPQKGMIYFSSFYVLAEILAIPAVPILTASSGYLFGLLPGTTACLFSASIAASISFVIGRTLLRGYVEGVLADNPKFQTMDTAIEKEGFKLMLLLRLSPLFPFALSNYLYGASSIRFGPYFFGTLLGFAPGTFAYVYAGDVGRALTI-DSASSEPWYVYLGGLAVVAGLIKIAGDVASGVIDAME 378
BLAST of NO19G02460 vs. NCBI_GenBank
Match: XP_009037153.1 (hypothetical protein AURANDRAFT_15332, partial [Aureococcus anophagefferens] >EGB08438.1 hypothetical protein AURANDRAFT_15332, partial [Aureococcus anophagefferens]) HSP 1 Score: 184.5 bits (467), Expect = 5.200e-43 Identity = 98/152 (64.47%), Postives = 121/152 (79.61%), Query Frame = 0 Query: 130 ITELGPWGYVLFSVIYIVAEILAIPAVPLSASSGYLFGLINGTAIVVLSATIAAATSFLIGRTLLRSTVEKWMEGY----PKFRALDKAIADEGFKIILLLRLSPIFPFALSNYMYGLTAVDFWPYFWATLIGFFPGTLAYVYSGYVGRSLT 278 + +LGP G + FSV+Y++AE+LA+PAVPL+AS+GYLFG + GTA+V+ SATIAA SFLIGR+LLR KW+EG +F+A+D+A+A EGFKIILLLRLSPIFPFALSNY YGLTAV+F PY ATL+GF PGT YVYSG V +T Sbjct: 1 VEKLGPLGPLYFSVVYVLAEVLALPAVPLTASAGYLFGAVEGTAVVLFSATIAAGASFLIGRSLLR----KWVEGIAAESEQFQAIDRAVAAEGFKIILLLRLSPIFPFALSNYFYGLTAVEFGPYLAATLLGFAPGTFLYVYSGEVASLVT 148
BLAST of NO19G02460 vs. NCBI_GenBank
Match: OEU16182.1 (SNARE_assoc-domain-containing protein, partial [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 170.6 bits (431), Expect = 7.700e-39 Identity = 87/138 (63.04%), Postives = 109/138 (78.99%), Query Frame = 0 Query: 133 LGPWGYVLFSVIYIVAEILAIPAVPLSASSGYLFGLINGTAIVVLSATIAAATSFLIGRTLLRSTVEKWMEGYPKFRALDKAIADEGFKIILLLRLSPIFPFALSNYMYGLTAVDFWPYFWATLIGFFPGTLAYVYSG 271 +G G F + Y +AEILAIPA+PL+AS+GYLFG + GTAIV+ SA+IAAA SF IGRTLLR VE + YPKF LD+AI EGFK++LLLRLSPIFPFALSNY+YG T+++F +F T++GF PGT+AYVY+G Sbjct: 16 MGTLGIAYFGIAYCIAEILAIPAIPLTASAGYLFGPVKGTAIVLFSASIAAAISFTIGRTLLRDYVEGVLVDYPKFAKLDRAIGREGFKLMLLLRLSPIFPFALSNYLYGATSINFTSFFGGTVLGFAPGTIAYVYTG 153
BLAST of NO19G02460 vs. NCBI_GenBank
Match: XP_002185430.1 (predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1] >EEC43099.1 predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 169.1 bits (427), Expect = 2.300e-38 Identity = 90/179 (50.28%), Postives = 127/179 (70.95%), Query Frame = 0 Query: 92 GIVLPTLLAICAALYQSGGLHHVQGINVADVFQQVEAKITELGPWGYVLFSVIYIVAEILAIPAVPLSASSGYLFGLINGTAIVVLSATIAAATSFLIGRTLLRSTVEKWMEGYPKFRALDKAIADEGFKIILLLRLSPIFPFALSNYMYGLTAVDFWPYFWATLIGFFPGTLAYVYSG 271 G +PTL A ++ +H Q +V ++ I +LGP G V F ++Y VAEILA+PA PL+ S+GYLFGL G A+V+++AT+AA+ +F++G+T+LRS VE +E P+ LD AI EGF+++LL+RLSPIFPFALSNY+YG +++ F YF ATL+GF PGT+AYVY+G Sbjct: 6 GGAVPTLAATITNVW-----NHPQ-----EVLSELAEGIRDLGPLGVVYFGILYTVAEILAVPATPLTLSAGYLFGLTQGVAVVLIAATVAASVAFVVGKTVLRSWVEGILEENPRMAKLDAAIGKEGFQLLLLVRLSPIFPFALSNYVYGASSISFGSYFCATLLGFAPGTVAYVYTG 174
BLAST of NO19G02460 vs. NCBI_GenBank
Match: EJK64463.1 (hypothetical protein THAOC_14798 [Thalassiosira oceanica]) HSP 1 Score: 168.7 bits (426), Expect = 2.900e-38 Identity = 89/194 (45.88%), Postives = 127/194 (65.46%), Query Frame = 0 Query: 126 VEAKITELGPWGYVLFSVIYIVAEILAIPAVPLSASSGYLFGLINGTAIVVLSATIAAATSFLIGRTLLRSTVEKWMEGYPKFRALDKAIADEGFKIILLLRLSPIFPFALSNYMYGLTAVDFWPYFWATLIGFFPGTLAYVYSGYVGRSLTEGQGMGGAPWYVYAGGIIGLGLVGKLVGDAANKAIGEYEEKE 320 +++ + LGP V F ++Y+ AE+LA+PA P + S+G LFGL G+A+V+++ T++A F IG+T+LR VE+ +E PKF+ LD+AI GFK++LL+RLSPIFPF+L NY YG ++V F + TLIGF P T+ YVYSG G+ L G+ PWY YAGG L KL D A + + +E+E Sbjct: 231 LQSTLDGLGPLAVVYFGLLYVAAELLALPATPFTLSAGALFGLGEGSAVVLVAGTVSAVIGFFIGKTVLRQYVEELLEENPKFKKLDRAIGVSGFKLLLLVRLSPIFPFSLINYTYGASSVPFPTFVAGTLIGFAPSTVGYVYSGLAGKELLSGEST--QPWYFYAGGAAVLFGFLKLATDVATEVVEAIDEEE 422
BLAST of NO19G02460 vs. NCBI_GenBank
Match: XP_015622413.1 (PREDICTED: TVP38/TMEM64 family membrane protein slr0305 [Oryza sativa Japonica Group] >EAZ14403.1 hypothetical protein OsJ_04323 [Oryza sativa Japonica Group]) HSP 1 Score: 156.0 bits (393), Expect = 2.000e-34 Identity = 90/213 (42.25%), Postives = 126/213 (59.15%), Query Frame = 0 Query: 109 GGLHHVQGINVADVFQQVEAKITELGPWGYVLFSVIYIVAEILAIPAVPLSASSGYLFGLINGTAIVVLSATIAAATSFLIGRTLLRSTVEKWMEGYPKFRALDKAIADEGFKIILLLRLSPIFPFALSNYMYGLTAVDFWPYFWATLIGFFPGTLAYVYSGYVGRSLTEGQ---GMGGAPWYVYAG-GIIGLGLVGKLVGDAANKAIGEYEE 318 G +V + Q I GP GY LF ++Y E+LAIPA+PL+ S+G LFG I GT IV +S T+AAA +FLI R R + K +EG KF A+DKAI + GFK++ LLRLSP+ PF+L NY+YGLT+V F PY + +G PG+ AYV +G GR++ + + G+GG + G G++ + V A A+ E +E Sbjct: 128 GAAGYVYKDQINTFLTQFSGFIDGYGPAGYALFVLVYAGLEVLAIPAIPLTMSAGLLFGSITGTVIVSISGTLAAAVAFLIARYFARERILKLVEGNKKFLAIDKAIGENGFKVVTLLRLSPLLPFSLGNYLYGLTSVKFLPYVLGSWLGMLPGSWAYVSAGAFGRAIIQDESEIGLGGNSQLLTLGIGLLFTAIAATYVTRLAKDAVKEIDE 340 The following BLAST results are available for this feature:
BLAST of NO19G02460 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO19G02460 ID=NO19G02460|Name=NO19G02460|organism=Nannochloropsis oceanica|type=gene|length=1806bpback to top protein sequence of NO19G02460.1 >NO19G02460.1-protein ID=NO19G02460.1-protein|Name=NO19G02460.1|organism=Nannochloropsis oceanica|type=polypeptide|length=321bpback to top Synonyms
Publications
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