NO19G02420, NO19G02420 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO19G02420 vs. NCBI_GenBank
Match: EWM23731.1 (hypothetical protein Naga_100734g2 [Nannochloropsis gaditana]) HSP 1 Score: 238.8 bits (608), Expect = 1.700e-59 Identity = 160/234 (68.38%), Postives = 175/234 (74.79%), Query Frame = 0 Query: 1 MSESYRKAVGGRLKIGGKEVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEEGGE-----EAPFLQAKQGTGRITTSGQIVTGYETEFLRELRVNDALIITHPSTFIEETRIIKMIVSNSGMSLSSGFSTDLISTTGFRYLHPPEEEGEDGREAXXXXXXXXXXXXXXDKAFGTYGGGGGTKLVYRVKKGGVYGGYKIVTEDTGAALSRTELLERRLQHKSDRHAN 230 MSESYR+AVGGRLKIGGKEV XXXXXXXXXX G +GG E P LQAK G+GRIT+SGQ+VTGYETEFL+ELRVNDALIITHPST +EETRI+KMIVSN G+SLSS FS+DLI+TT FRY+H XXXXXXXXXXXXXX FGTYGG GG+KLVYRVKK G YGGY+IVTEDTGA+LSRTELLERRLQHKSDRHAN Sbjct: 12 MSESYRRAVGGRLKIGGKEV-DVSRKKXXXXXXXXXXEENLEADPDPRRVLKHSKEEGNDGGSGAEEGETPLLQAKAGSGRITSSGQVVTGYETEFLQELRVNDALIITHPSTLMEETRIVKMIVSNKGLSLSSPFSSDLITTTRFRYIHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFGTYGGAGGSKLVYRVKKTGTYGGYRIVTEDTGASLSRTELLERRLQHKSDRHAN 244
BLAST of NO19G02420 vs. NCBI_GenBank
Match: XP_005852439.1 (Niemann-Pick C1 protein [Nannochloropsis gaditana CCMP526] >EKU23393.1 Niemann-Pick C1 protein [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 217.2 bits (552), Expect = 5.200e-53 Identity = 130/177 (73.45%), Postives = 143/177 (80.79%), Query Frame = 0 Query: 58 GEEGGE-----EAPFLQAKQGTGRITTSGQIVTGYETEFLRELRVNDALIITHPSTFIEETRIIKMIVSNSGMSLSSGFSTDLISTTGFRYLHPPEEEGEDGREAXXXXXXXXXXXXXXDKAFGTYGGGGGTKLVYRVKKGGVYGGYKIVTEDTGAALSRTELLERRLQHKSDRHAN 230 G EGG E P LQAK G+GRIT+SGQ+VTGYETEFL+ELRVNDALIITHPST +EETRI+KMIVSN G+SLSS FS+DLI+TT FRY+H XXXXXXXXXXXXXX GTYGG GG+KLVYRVKK G YGGY+IVTED GA+LSRTELLERRLQHKSDRHAN Sbjct: 47 GNEGGSGAEEGETPLLQAKAGSGRITSSGQVVTGYETEFLQELRVNDALIITHPSTLMEETRIVKMIVSNKGLSLSSPFSSDLITTTRFRYIHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTYGGAGGSKLVYRVKKAGTYGGYRIVTEDMGASLSRTELLERRLQHKSDRHAN 223
BLAST of NO19G02420 vs. NCBI_GenBank
Match: XP_008866274.1 (hypothetical protein H310_03960 [Aphanomyces invadans] >ETW04836.1 hypothetical protein H310_03960 [Aphanomyces invadans]) HSP 1 Score: 137.1 bits (344), Expect = 6.800e-29 Identity = 82/162 (50.62%), Postives = 101/162 (62.35%), Query Frame = 0 Query: 72 QGTGRITTSGQIVTG-YETEFLRELRVNDALIITHPSTFIEETRIIKMIVSNSGMSLSSGFSTDLISTTGFRYLH-PPEEEGEDGREAXXXXXXXXXXXXXXDKAFGTYGGG--GGTKLVYRVKKGGVYGGYKIVTEDTGAALSRTELLERRLQHKSDRHAN 230 QGTGRI TSG V G T+F EL + DALII HP++ EETRI+KM++S+ +S+SS FS+DL+STT F Y+ PPEE +D E+ AFGTY GG GT+ YRVKK GVYGGY I+ E A SR ELL+ R + K DRH N Sbjct: 54 QGTGRILTSGTTVMGKMGTKFFHELSIGDALIINHPTSLKEETRIVKMVLSDVSVSISSPFSSDLVSTTTFWYIKAPPEEVDKDAVESKKRSKKNDEEA----SAFGTYAGGTTAGTEFTYRVKKAGVYGGYAIIKETADANRSREELLDIRSKRKGDRHCN 211
BLAST of NO19G02420 vs. NCBI_GenBank
Match: CCI45275.1 (unnamed protein product [Albugo candida]) HSP 1 Score: 136.3 bits (342), Expect = 1.200e-28 Identity = 77/159 (48.43%), Postives = 104/159 (65.41%), Query Frame = 0 Query: 72 QGTGRITTSGQIVTG-YETEFLRELRVNDALIITHPSTFIEETRIIKMIVSNSGMSLSSGFSTDLISTTGFRYLHPPEEEGEDGREAXXXXXXXXXXXXXXDKAFGTYGGGG--GTKLVYRVKKGGVYGGYKIVTEDTGAALSRTELLERRLQHKSDRH 228 +GTGRI +SG + G T+FL+EL V DA+II HP++ +EETRI++M++S+ SLSS FSTDLIS+T F Y++ P+++ E E+ AFGTY GG GT+L YRVKK GVYGGY+I+ E A +R ELL+ R + K DRH Sbjct: 1453 KGTGRILSSGTTLMGQIGTKFLQELSVGDAIIIQHPTSLVEETRILRMVLSDVSASLSSPFSTDLISSTAFHYINAPKDDDEQENES---TLKKRILKSDEKNAFGTYAGGTEMGTELTYRVKKSGVYGGYQIIREKASAVRTREELLDFREKKKGDRH 1608
BLAST of NO19G02420 vs. NCBI_GenBank
Match: XP_005855730.1 (Niemann-Pick C1 protein [Nannochloropsis gaditana CCMP526] >EKU20632.1 Niemann-Pick C1 protein [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 136.0 bits (341), Expect = 1.500e-28 Identity = 69/93 (74.19%), Postives = 79/93 (84.95%), Query Frame = 0 Query: 58 GEEGGE-----EAPFLQAKQGTGRITTSGQIVTGYETEFLRELRVNDALIITHPSTFIEETRIIKMIVSNSGMSLSSGFSTDLISTTGFRYLH 146 G EGG E P LQAK G+GRIT+SGQ+VTGYETEFL+ELRVNDALIITHPST +EETRI+KMIVSN G+SLSS FS+DLI+TT FRY+H Sbjct: 47 GNEGGSGAEEGETPLLQAKAGSGRITSSGQVVTGYETEFLQELRVNDALIITHPSTLMEETRIVKMIVSNKGLSLSSPFSSDLITTTRFRYIH 139
BLAST of NO19G02420 vs. NCBI_GenBank
Match: CCA22318.1 (conserved unknown protein putative [Albugo laibachii Nc14]) HSP 1 Score: 132.5 bits (332), Expect = 1.700e-27 Identity = 76/159 (47.80%), Postives = 102/159 (64.15%), Query Frame = 0 Query: 72 QGTGRITTSGQIVTG-YETEFLRELRVNDALIITHPSTFIEETRIIKMIVSNSGMSLSSGFSTDLISTTGFRYLHPPEEEGEDGREAXXXXXXXXXXXXXXDKAFGTYGGGG--GTKLVYRVKKGGVYGGYKIVTEDTGAALSRTELLERRLQHKSDRH 228 +GTGRI +SG + G T+FL+EL V DA+II HP++ +EETRI++M++S+ SLSS FSTDLIS+T F Y+ P++E E + AFGTY GG GT+L YRVKK GVYGGY+++ E A +R ELL+ R + K DRH Sbjct: 79 KGTGRILSSGTTLMGQIGTKFLQELSVGDAIIIQHPTSLMEETRILRMVLSDVSASLSSPFSTDLISSTSFSYIKAPKDEDE---QENASTLKKRILKSDEKNAFGTYAGGTEMGTELTYRVKKSGVYGGYQLIREKASAVRTREELLDFREKKKGDRH 234
BLAST of NO19G02420 vs. NCBI_GenBank
Match: CBJ31876.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 131.3 bits (329), Expect = 3.700e-27 Identity = 74/157 (47.13%), Postives = 97/157 (61.78%), Query Frame = 0 Query: 73 GTGRITTSGQIVTGYETEFLRELRVNDALIITHPSTFIEETRIIKMIVSNSGMSLSSGFSTDLISTTGFRYLHPPEEEGEDGREAXXXXXXXXXXXXXXDKAFGTYGGGGGTKLVYRVKKGGVYGGYKIVTEDTGAALSRTELLERRLQHKSDRHAN 230 GTGRIT+SG V G+E +F+ EL DA++ITHP+T EETRIIKM++SN +S+SS FS+DLISTT FRY+ P E +A D AFGTY G GG +LVYR + G Y+I+ A++R E+L+ R K+DRH N Sbjct: 71 GTGRITSSGTAVHGHEAKFMDELHSGDAILITHPTTLREETRIIKMVLSNMSISISSPFSSDLISTTNFRYIKAPRLEVSAETKA---EERKKRKVQEEDSAFGTYAGAGGKRLVYRERTPA--GNYRIIETTVDEAMTREEMLDMRATKKADRHCN 222
BLAST of NO19G02420 vs. NCBI_GenBank
Match: XP_009823372.1 (hypothetical protein H257_01727 [Aphanomyces astaci] >ETV86573.1 hypothetical protein H257_01727 [Aphanomyces astaci]) HSP 1 Score: 131.0 bits (328), Expect = 4.900e-27 Identity = 78/162 (48.15%), Postives = 99/162 (61.11%), Query Frame = 0 Query: 72 QGTGRITTSGQIVTG-YETEFLRELRVNDALIITHPSTFIEETRIIKMIVSNSGMSLSSGFSTDLISTTGFRYLH-PPEEEGEDGREAXXXXXXXXXXXXXXDKAFGTYGGG--GGTKLVYRVKKGGVYGGYKIVTEDTGAALSRTELLERRLQHKSDRHAN 230 QGTGRI TSG V G T+F EL + DALII HP++ EETRI+KM++S+ +S+SS FS+DL+STT F Y+ PPEE +D E AFGTY GG G++ YRVKK G YGGY ++ E A SR +LL+ R + K DRH N Sbjct: 53 QGTGRILTSGTTVMGKMGTKFYHELSIGDALIIMHPTSMKEETRIVKMVLSDVSISISSPFSSDLVSTTTFSYIKAPPEEIDQDAIETKKRSKKNEEETF----AFGTYAGGTSAGSEFTYRVKKAGAYGGYAVLKETADANRSREDLLDIRSKRKGDRHCN 210
BLAST of NO19G02420 vs. NCBI_GenBank
Match: OQR93173.1 (Niemann-Pick C1 protein [Thraustotheca clavata]) HSP 1 Score: 129.4 bits (324), Expect = 1.400e-26 Identity = 93/165 (56.36%), Postives = 112/165 (67.88%), Query Frame = 0 Query: 68 LQAKQGTGRITTSGQIVTG-YETEFLRELRVNDALIITHPSTFIEETRIIKMIVSNSGMSLSSGFSTDLISTTGFRYLHPPEEEGEDGREAXXXXXXXXXXXXXXDKAFGTYGGG--GGTKLVYRVKKGGVYGGYKIVTEDTGAALSRTELLERRLQHKSDRHAN 230 L+ QGTGRI TSG V G T+FL EL V DA+II HP++ EETRI++M++S+ +SLSSGFS+DLISTT F Y+ P XXXXXXXXXXXXXX AFGTY GG GT+ YRVKK G+YGGY I+ E + SR ELL+ R + K DRH N Sbjct: 49 LKKLQGTGRILTSGTTVMGRLGTKFLSELSVGDAMIIQHPTSGQEETRIVRMVLSDVSISLSSGFSSDLISTTTFHYIKAP---XXXXXXXXXXXXXXXXXXXXXXXAFGTYAGGTTAGTQYTYRVKKSGIYGGYAIMKETADSNRSREELLDIRSKKKGDRHCN 210
BLAST of NO19G02420 vs. NCBI_GenBank
Match: GAY05093.1 (putative dehydrogenase [Pythium insidiosum]) HSP 1 Score: 124.4 bits (311), Expect = 4.600e-25 Identity = 86/164 (52.44%), Postives = 106/164 (64.63%), Query Frame = 0 Query: 68 LQAKQGTGRITTSGQIVTGYE-TEFLRELRVNDALIITHPSTFIEETRIIKMIVSNSGMSLSSGFSTDLISTTGFRYLHPPEEEGEDGREAXXXXXXXXXXXXXXDKAFGTYGGG--GGTKLVYRVKKGGVYGGYKIVTEDTGAALSRTELLERRLQHKSDRHA 229 L +QG+GRI +SG V G T FL+EL V DALII HP T EETRI++M++S+ ++SS FS+DL+S+T F+Y+ P XXXXXXXXXXX AFGTY GG GT YRVKK G YGGY IVTE + SR ELL+ R + K DRH+ Sbjct: 811 LVKRQGSGRILSSGTTVMGQPGTRFLQELAVGDALIIQHPKTLTEETRIVRMVLSDVSCAISSAFSSDLVSSTPFQYIKAPXXXXXXXXXXXXXXXXXXXXXA---AAFGTYAGGTEAGTTYSYRVKKSGTYGGYAIVTERAQESRSREELLDMRSKRKGDRHS 971 The following BLAST results are available for this feature:
BLAST of NO19G02420 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO19G02420 ID=NO19G02420|Name=NO19G02420|organism=Nannochloropsis oceanica|type=gene|length=1073bpback to top protein sequence of NO19G02420.1 >NO19G02420.1-protein ID=NO19G02420.1-protein|Name=NO19G02420.1|organism=Nannochloropsis oceanica|type=polypeptide|length=230bpback to top Synonyms
Publications
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