NO19G02300, NO19G02300 (gene) Nannochloropsis oceanica

Overview
NameNO19G02300
Unique NameNO19G02300
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length6291
Alignment locationchr19:658619..664909 +

Link to JBrowse

Properties
Property NameValue
DescriptionVam6/Vps39-like protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr19genomechr19:658619..664909 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0016192vesicle-mediated transport
GO:0016192vesicle-mediated transport
GO:0006886intracellular protein transport
Vocabulary: INTERPRO
TermDefinition
IPR032914Vam6/VPS39/TRAP1
IPR019453VPS39/TGF_beta_rcpt-assoc_2
Vocabulary: Cellular Component
TermDefinition
GO:0030126COPI vesicle coat
Vocabulary: Molecular Function
TermDefinition
GO:0005198structural molecule activity
Homology
BLAST of NO19G02300 vs. NCBI_GenBank
Match: CBJ28092.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 153.7 bits (387), Expect = 4.000e-33
Identity = 260/881 (29.51%), Postives = 351/881 (39.84%), Query Frame = 0
Query:  496 DKLTWHAPPKASQVVLPFLVSLXXXXXXXXXXXXXXXXXVWVEIHDLSSLAALQLIPLMVXXXXXXXXXXXXXXXXCACRMALGRAENVYVSFPPSFXXXXXXXXXXXXXXXXXXXXXXXXXXXXVVCLTMLPLVTQIDRLVGLGQHRQALTLAALVEGEGRGEGGEWLAEIDLPRVREGFAGVLCGKGQYGEAVREWLQADTPPAIVLAHFSSLFPPDLALPPSLKSLVGKKKKSQPSARAGGSADAIPAAHVPKASVALLAFLQHHRRSFKEMADK--------------------XXXXXXXXXXXXXXXXXXXXXGMAVFVDTM-XXXXXXXXXXXXXXXXXXAGGANRADVDACAPVLAAQGAPFIEALLWLYRSHDLHAQALSLLHEDRCVA------REGGREGGRGWTLSQFHAWTADYLSSLWHAAXXXXXXXXXXXXLVLAHLRPLLEGNPKLGLGVLESKPRVV-----EADWKAAMRKG-EREGGG---------------------------EGGRGSLFYKSAGS-------------TVALPLVTGATLAMAYLDYLID--------------AGQAPPALHD------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXPLTPLGLLYQAKLREFLRSPSSLYHPQRLLPALQPFLPRAFLVEHALLLARLGQHRDVLRTYAVELNNPSLAEEYCEEVYRRKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXN-------------TPRWL---------------------ACLERNFDKIDAVAALSLLPARTTTLRSLSPYLTRVLRHCATERRHKEIVHQLLRVEELKVKQELILEQSRRVTITEDTACRVP 1250
            ++LTW APP +  +   F V+                    VE+HDL+SLA LQ   L                    C +  GR +  YV+   S                             V  L ++P+  Q++ L   G +  AL+L A+ +          L  +++  + E +A  L   G Y  AV  +L A+TP   VL+ F SL PP+  +PP   SL G     +    +G     +      +A+ A++ FL+ HR +    A++                    XXXXXXXXXXXXXXXXXXXXX   V +DTM                     G NR  + ACAP+LAA G  FIEALL LYR   LH  AL+L  EDRCVA                 T  QF  W A YL  L                LVL  ++PLLE +P LGL V  ++ R          + A  R G  R  GG                           E GR +    +A +              + +P  +G  LA+ YL  LID               G+   ALHD             XXXXXXXXXXXXXXXXXXXXXX    L   Y+ +L+ FL++ S  Y+P RLL      +P  FL EHALLL+RLG+H +VL  Y  +L N  +AE YC  ++ R                     XXXXX                N             +P  L                     + LER+F ++D V  ++LLP  +  +  L P+L+  +RH    RR  ++ HQL R + + VK ELI  Q +   + E +    P
Sbjct:  268 ERLTWTAPPLSVCLSTAFFVAALPRQ---------------VEVHDLASLAPLQTFDL------------PGATCMTTCPVGGGRGDLTYVATANS-----------------------------VNLLKLIPIEFQVETLAESGSYEDALSLCAMCKDM------SVLGSVNVLSIHERYAYDLFSWGDYEGAVGHFLVAETPVDHVLSLFPSLAPPEF-VPPG-GSLQGPNTPKKGPTSSGEPPRQLTGVSRSRAASAVMTFLERHRPAILAAAEREDCQKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDTLVLLDTMLMSSYVQCSPPRHSALVELLSGPNRCSLAACAPLLAASGPSFIEALLCLYRGRGLHEDALALATEDRCVAPXXXXXXXXXXXXXXXXTAPQFRRWLAAYLREL------RLSSEPAHRALVLRSVKPLLEADPALGLSVFLNEHRQATGLSHHGGFLAQRRVGVSRRAGGASADGRRAEAGLAPHDVVSFLKTITPSESGRANAETSAAATXXXAQPAKEGQAVPMTIPFTSGRALAVGYLQVLIDXXXXXXXXXXXXXXEGEVTSALHDELAYLLMEGLLVEXXXXXXXXXXXXXXXXXXXXXXXXNGLAAAYRQRLQLFLQT-SEKYNPARLLSV----IPSHFLEEHALLLSRLGRHEEVLHIYVRQLKNREMAEAYCGRIWERCESAAKAKSTAKRGAPADAATXXXXXDEEVYLFLLKVYLQGQNKAGGHHPAQSKAGSPSSLKVSDDGVAAVGEEVGGLDEAVSLLERHFSRVDPVKVMALLPP-SVPVSKLVPFLSSAVRHAEARRRSNQVTHQLCRADYVNVKFELIQLQGQVSRVPELSLASFP 1072          
BLAST of NO19G02300 vs. NCBI_GenBank
Match: XP_009040634.1 (hypothetical protein AURANDRAFT_72465 [Aureococcus anophagefferens] >EGB04720.1 hypothetical protein AURANDRAFT_72465 [Aureococcus anophagefferens])

HSP 1 Score: 131.7 bits (330), Expect = 1.600e-26
Identity = 171/680 (25.15%), Postives = 247/680 (36.32%), Query Frame = 0
Query:  622 VCLTMLPLVTQIDRLVGLGQHRQALTLAALVEGEGRGEGGEWLAEIDLPRVREGFAGVLCGKGQYGEAVREWLQADTPPAIVLAHFSSLFPPDLALPPSLKSLVGKKKKSQPSARAGGSA----DA------IPAAHVPKASVALLAFLQHHRRSFKEMADKXXXXXXXXXXXXXXXXXXXXXGMAVFVDTM--XXXXXXXXXXXXXXXXXXAGGANRADVDACAPVLAAQGAPFIEALLWLYRSHDLHAQALSLLHEDRCVAREGGREGGRGWTLSQFHAWTADYLSSLWHAAXXXXXXXXXXXXLVLAHLRPLLEGNPKLGLGVLESKPRVVEADWKAAMRKGEREGGGEGGRG-------------------------SLFYKSAGSTV--------ALPLVTGATLAMAYLDYLIDAGQAPPALHDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPLTPLGLLYQAKLREFLRSPSSLYHPQRLLPALQPFLPRAFLVEHALLLARLGQHRDVLRTYAVELNNPSLAEEYCEEVYRR-------------KXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNTPR------WLACLERNFDKIDAVAALSLLPARTTTLRSLSPYLTRVLRHCATERRHKEIVHQLLRVEELKVKQELILEQSRR 1238
            V L MLP+  Q+  L+   ++  AL L A                 +   + E +A  L  +G +  A + WL A+  P  V   F S+ PP+L+L      L  KK   Q S ++G S     DA      +  A + +A+ A+ +F    RR       +                        V VDTM                       + + +++  AP+LAA GA + E LLWLYRS   H +AL+LL EDRC A     EG + W   +F  W A YL  LW +             L + H  P+    P LGL V       V  D    +       GG G                            SL++ +  +++         +PL +GA+LA  YL  L+ AG+  P LH+                                    +Y+ +LR FL++ S  Y  + LL     +LP  FL E AL+ ARL  H  VL  Y   L +  LAE+YC  V++              K                                         + PR       L  L R+ +K D V AL  LP    +L     +L  ++R   +ERR   + H LLRVE + +K EL  EQ ++
Sbjct:  394 VVLQMLPVGRQLQALLDSARYEDALALCASCTD----------CRHEALIIEERYAYALYSRGDFEGASQHWLNAEAAPEAVAELFPSICPPELSL-----LLASKKTSLQTSDQSGTSMPEKYDALLLKPILRGASLSRAAAAIASFFAVARRRLISCVTEYSDGNRSSKCDASEVQDT----QLVLVDTMLIAAWLQCSPPRVEDVVFLLQDPSQQCELEYVAPLLAAGGALYAEPLLWLYRSKQAHQRALALLVEDRCCAE--NNEGSQAWDRDRFRCWKARYLRWLWFSG------EPRNASLAIEHAAPVFSTAPALGLAVFTGAKISVRDDQDDIIMPLPIRNGGAGMTARDVVAWMKELGSIKRMQQSDQILDTSLWHATLRTSLECQGYEAQLVPLDSGASLACVYLSQLVCAGEKSPLLHNELAYLLLDSLKQVGATDAKRAN--------------IYRLQLRLFLKT-SKHYEAEVLL----SWLPTYFLHERALVFARLQNHLAVLNVYTEGLKDDGLAEDYCANVWQEAERARNMTLVATSKDAESHQSETKFPITSSLDVYLTLAQCYYSESLDVPTEANHLDAPRKTTFIKALDLLHRHINKTDPVDALDALP-NDVSLHLCVDFLKLLVRSSESERRAALVEHNLLRVEFVNLKYELTQEQIKQ 1026          
BLAST of NO19G02300 vs. NCBI_GenBank
Match: XP_009040377.1 (hypothetical protein AURANDRAFT_72369 [Aureococcus anophagefferens] >EGB05026.1 hypothetical protein AURANDRAFT_72369 [Aureococcus anophagefferens])

HSP 1 Score: 130.2 bits (326), Expect = 4.700e-26
Identity = 170/703 (24.18%), Postives = 254/703 (36.13%), Query Frame = 0
Query:  624 LTMLPLVTQIDRLVGLGQHRQALTLAALVEGEGRGEGGEWLAEIDLPRVREGFAGVLCGKGQYGEAVREWLQADTPPAIVLAHFSSLFPPDLALPPSLKSLVGK----KKKSQPSARAGGSADAIPAAHVPKASVALLAFLQHHRRSFKEMADKXXXXXXXXXXXXXXXXXXXXXGMAVFVDTM--XXXXXXXXXXXXXXXXXXAGGANRADVDACAPVLAAQGAPFIEALLWLYRSHDLHAQALSLLHEDRCVAREGGREGGRGWTLSQFHAWTADYLSSLWHAAXXXXXXXXXXXXLVLAHLRPLLEGNPKLGLGVLESKPRVVEAD-------------------WKAAMRKGEREGGGEGGRGSLFYK-------SAGSTVALPLVTGATLAMAYLDYLIDAGQAPPALHDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPLTPLGLLYQAKLREFLRSPSSLYHPQRLLPALQPFLPRAFLVEHALLLARLGQHRDVLRTYAVELNNPSLAEEYCEEVYRRKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNTP-----------RWLACLERNFDKIDAVAALSLLPARTTTLRSLSPYLTRVLRHCATERRHKEIVHQLLRVEELKVKQEL----ILEQSRRVTITEDTAC-RVPTCRRPIGNTAILCYPNGVVVHLACGRNDL 1279
            L M  +  Q+  L+   Q+  AL L A    +  G         D   V E +A  L  +G +  A + WL A+T P  V   F S+ PP+L+    L+S  G+    +  S+    A  S   +  A + +A+ A+ +F +  RR     + +                          VDTM                         R +++  AP+LAA GA + E LLWLYRS   H +AL+LL E RC     G      W   QF  W   YL  LW +             L L H   +   +P LGL V       ++ D                   W   + K      GE   G  F++         G+  +L L  GA +A  YL+YL+ AG+  P LH+                                    +Y+  LR FL   S  Y  +  L     +LP  FL E AL+LAR+  H+ VL+ YA+ L +  LAE+YCE ++                                            +T            + L  + RN +++     L+ LP    +L   + +   ++R   +ERR   + H L RVE + +K EL    I +QS    + E  +  RV     P+      C   G   H++C R+ L
Sbjct:  567 LRMTSVDDQVQNLLDSAQYEDALALCASSARKFHG---------DSRLVEERYAYALYSRGDFEGASQHWLNAETAPQAVADLFPSIRPPELSTRLGLRSDDGEFAVLETVSREKHHALSSMPLLRGASLSRAAAAIASFFEITRRRLNARSSE--------GSMLDYKNTETVCDQLALVDTMLIAVWLQCSPPRIKDVVALLRDPGQRCELEYVAPLLAAGGAVYAEPLLWLYRSKHAHQRALALLVETRCCGDVNG-----AWDRVQFLRWKTRYLQWLWFS------DDQRNTNLALEHAPSVFAASPALGLAVFTGTLVDIQGDEDPLEVPLSVRVPAYDVVTWMKDL-KLRAVQAGEKSSGPSFWQVPPCLSCELGAGGSLALDDGAAVACVYLEYLVSAGEDSPMLHNELGYLLLDGLKRIGGSDHES--------------SSIYRQWLRTFLMR-SKNYDAKAQL----SWLPETFLHERALVLARMQNHKAVLKIYAISLRDDKLAEDYCENIWGEATQSRDTRLVTEPHNPEILSNTASDVYTTLANIYASQLVIQHSTTDATLPCAVALGKALGFMHRNLNRLHPAKVLNALPV-DLSLSCYAKFTEALIRSSESERRAALVQHNLRRVEFVNLKYELTRQQIKQQSTMSAVPELASLGRVKRSLTPV--VLSECTEGGEAYHVSCTRHAL 1218          
BLAST of NO19G02300 vs. NCBI_GenBank
Match: XP_011445059.1 (PREDICTED: vam6/Vps39-like protein [Crassostrea gigas] >EKC27689.1 Vam6/Vps39-like protein [Crassostrea gigas])

HSP 1 Score: 103.6 bits (257), Expect = 4.700e-18
Identity = 77/239 (32.22%), Postives = 114/239 (47.70%), Query Frame = 0
Query: 1045 QAKLREFLRSPSSLYHPQRLLPALQPFLPRAFLVEHALLLARLGQHRDVLRTYAVELNNPSLAEEYCEEVYRRKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNTPRWLACLERNFDKIDAVAALSLLPARTTTLRSLSPYLTRVLRHCATERRHKEIVHQLLRVEELKVKQELILEQSRRVTITEDTACRVPTCRRPIGNTAILCYPNGVVVHLACGRNDLHRCPV 1284
            ++ L +FL + S  Y P+RLL       P  F  E A+LL RLG+H   L  Y   L++  LAEEYC++ YR+                                          N    L  ++ +  KID   +L LLP+ TT +  +  YL  V+ H A  RR  +++  +L  E L+V ++ +  +  +VTIT++  CRV  CR+ IGN+A + YPNGV+VH  C + D   CPV
Sbjct:  651 RSTLLKFL-NMSEFYIPERLLTR----FPLGFYEERAILLGRLGRHEQALGIYVHVLHDDRLAEEYCKKYYRK-----DKDSLKDVYFFLLKMYLDPPSPSTLGVSASQGIVPKPNMNAALRLMKEHAPKIDTSKSLELLPS-TTKMSEILAYLENVMEHQAMIRRKNQVLKSMLYAENLQVHEQRMFYEKCKVTITDEKMCRV--CRKKIGNSAFVRYPNGVIVHYYCCK-DPKECPV 875          
BLAST of NO19G02300 vs. NCBI_GenBank
Match: XP_022332036.1 (vam6/Vps39-like protein [Crassostrea virginica])

HSP 1 Score: 103.6 bits (257), Expect = 4.700e-18
Identity = 81/245 (33.06%), Postives = 116/245 (47.35%), Query Frame = 0
Query: 1041 GLLYQAK--LREFLRSPSSLYHPQRLLPALQPFLPRAFLVEHALLLARLGQHRDVLRTYAVELNNPSLAEEYCEEVYRRKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNTPRWLACLERNFDKIDAVAALSLLPARTTTLRSLSPYLTRVLRHCATERRHKEIVHQLLRVEELKVKQELILEQSRRVTITEDTACRVPTCRRPIGNTAILCYPNGVVVHLACGRNDLHRCPV 1284
            G L QA+  L +FL + S  Y P+RLL       P  F  E A+LL RLG+H   L  Y   L++  LAEEYC++ YR+                                          N    L  +  +  KID   +L LLP+ TT +  +  YL  V+ H A  RR  +++  +L  E L+V ++ +  +  +VTIT++  CRV  CR+ IGN+A + YPNGV+VH  C + D   CPV
Sbjct:  646 GELGQARSTLLKFL-NMSEFYVPERLLTR----FPLGFYEERAILLGRLGRHEQALGIYVHVLSDVHLAEEYCKKYYRK-----DKDSLKDVYFYLLKMYLDPPSPSTLGLSASQGIVPKPNMTAALQLMREHAPKIDTSKSLELLPS-TTKMSDILAYLENVMEHQAMIRRKNQVLKSMLYAENLQVHEQRMFYEKCKVTITDEKMCRV--CRKKIGNSAFVRYPNGVIVHYYCCK-DPKECPV 876          
BLAST of NO19G02300 vs. NCBI_GenBank
Match: XP_020777366.1 (vam6/Vps39-like protein [Boleophthalmus pectinirostris] >XP_020777367.1 vam6/Vps39-like protein [Boleophthalmus pectinirostris])

HSP 1 Score: 100.1 bits (248), Expect = 5.200e-17
Identity = 79/239 (33.05%), Postives = 111/239 (46.44%), Query Frame = 0
Query: 1044 YQAKLREFLRSPSSLYHPQRLLPALQPFLPRAFLVEHALLLARLGQHRDVLRTYAVELNNPSLAEEYCEEVYRRKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNTPRWLACLERNFDKIDAVAALSLLPARTTTLRSLSPYLTRVLRHCATERRHKEIVHQLLRVEELKVKQELILEQSRRVTITEDTACRVPTCRRPIGNTAILCYPNGVVVHLACGRNDLHRCP 1283
            ++ KL  FL   SS Y P+RL+    PF     L E ALLL R+G+H   L  Y   L + S+AEEYC     R+                                         N    L  LE +  K++   A++LLPA  T +R +  +L  VL   A  +R  +++  LL+ E L+V++E I  Q  +  ITE+  CRV  C++ IGN+A   YPNGVVVH  C + D + CP
Sbjct:  644 FRHKLLSFLEESSS-YEPERLISNF-PF--DGLLEERALLLGRMGKHEQALFIYVHILKDTSMAEEYC-----RRHYDSSVEGNKDVYLSLLRMYLSPPDVHCLGPIKMEVCEPQANLQAALQVLELHHSKLNTTKAINLLPA-NTQIREIRVFLESVLEEKAQRKRCNQVLKSLLQAEFLRVQEERIYHQQVKCVITEEKTCRV--CKKKIGNSAFARYPNGVVVHYFCCK-DRNTCP 869          
BLAST of NO19G02300 vs. NCBI_GenBank
Match: XP_006632652.1 (PREDICTED: vam6/Vps39-like protein isoform X1 [Lepisosteus oculatus])

HSP 1 Score: 99.8 bits (247), Expect = 6.800e-17
Identity = 80/239 (33.47%), Postives = 111/239 (46.44%), Query Frame = 0
Query: 1044 YQAKLREFLRSPSSLYHPQRLLPALQPFLPRAFLVEHALLLARLGQHRDVLRTYAVELNNPSLAEEYCEEVYRRKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNTPRWLACLERNFDKIDAVAALSLLPARTTTLRSLSPYLTRVLRHCATERRHKEIVHQLLRVEELKVKQELILEQSRRVTITEDTACRVPTCRRPIGNTAILCYPNGVVVHLACGRNDLHRCP 1283
            ++ KL +FL S S+ Y P+RL+    PF     L E ALLL R+G+H   L  Y   L +  +AEEYC   Y R                                          N    L  LE +  K++   A++LLPA  T +R +  +L  VL   A ++R  +++  LL  E L+VK+E I  Q  +  ITE+  CRV  C++ IGN+A   YPNGVVVH  C + D   CP
Sbjct:  648 FRNKLLKFLES-STRYEPERLISDF-PF--DGLLEERALLLGRMGKHEQALFIYVHILKDIRMAEEYCHRHYDR-----VTDGNKDVYLSLLRMYLSPPDVHCLGPIKMELLEPQANLQAALQVLELHHSKLNTTKAINLLPA-NTQIREIRVFLESVLEENAKKKRFDQVLKSLLHAEFLRVKEERIFHQQVKCIITEEKTCRV--CKKKIGNSAFARYPNGVVVHYFCCK-DRSLCP 873          
BLAST of NO19G02300 vs. NCBI_GenBank
Match: XP_008861662.1 (hypothetical protein H310_00601 [Aphanomyces invadans] >ETW10251.1 hypothetical protein H310_00601 [Aphanomyces invadans])

HSP 1 Score: 99.8 bits (247), Expect = 6.800e-17
Identity = 118/457 (25.82%), Postives = 178/457 (38.95%), Query Frame = 0
Query:  822 AGGANRADVDACAPVLAAQGAPFIEALLWLYRSHDLHAQALSLLHEDRCVAREGGREGGRGWTLSQFHAWTADYLSSLWHAAXXXXXXXXXXXXLVLAHLRPLLEGNPKLGLGVLESK--PRVVEADWKAAMRKGEREGGGEGGRGSLFYKSAGSTVALPLVTGATLAMAYLDYLIDAGQA--PPALHD-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXPLTPLGLLYQAKLREFLRSPSSLYHPQRLLPALQPFLPRAFLVEHALLLARLGQHRDVLRTYAVELNNPSLAEEYCEEVYRRKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNTPRWLACLERNFDKIDAVAALSLLPARTTTLRSLSPYLTRVLRHCATERRHKEIVHQLLRVEELKVKQELILEQSRRVTITEDTACRVPTCRRPIGNTAILCYPNGVVVHLAC 1274
            +  +N AD+      L   G    +ALL LY+ H LH +AL +L E                   ++    A YL+ L  A             LV  + R LL   P  G+ +   +        D   A+     +      + S    S  +T  LPL  G  LA++YL  +I A Q   P +LHD                                 P+    +  L  FL+SP ++YHP+RLL  +   +    L E A+LLA +G+H +VLR Y  E+ + +LAE YC E Y  +                                               A + R+   ID   AL LLP  +    +++ YL RV+     ++RH ++  QLL++E L V+  L   +   V +  D+ C V  C RP+    +LC+PNG ++H AC
Sbjct:  471 SASSNAADLGESELFLRVHGQ--WQALLALYKHHGLHRKALDVLDELHTN------------DPVEYEQPLAQYLTELSDA------------PLVFEYSRRLLTTRPNAGIAIFTHRHHHHATSIDLDPALVLQHLKSIDVTTQES----SPMATSDLPLSNGTFLAISYLSQVIYANQVELPSSLHDELVYLLLDAIDTAQRNKTPKKEAFHVRVHLQRDPVLGPLRKHLLTFLQSPLAMYHPERLLSRMHVDM----LEERAVLLANMGRHEEVLRLYLHEIRDAALAETYCNECYTHRITDASIYTLFLQTYLRPPTPAVGRLRSSMSLLTSGIGLHFV-----AAFMLRHAHCIDVATALELLPP-SVEAAAVAAYLERVVELKVEQKRHVQVQKQLLKIENLHVRSALNAAKQGSVRVDVDSTCDV--CARPVERGPVLCHPNGTLLHYAC 885          
BLAST of NO19G02300 vs. NCBI_GenBank
Match: XP_015206446.1 (PREDICTED: vam6/Vps39-like protein isoform X2 [Lepisosteus oculatus])

HSP 1 Score: 99.8 bits (247), Expect = 6.800e-17
Identity = 80/239 (33.47%), Postives = 111/239 (46.44%), Query Frame = 0
Query: 1044 YQAKLREFLRSPSSLYHPQRLLPALQPFLPRAFLVEHALLLARLGQHRDVLRTYAVELNNPSLAEEYCEEVYRRKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNTPRWLACLERNFDKIDAVAALSLLPARTTTLRSLSPYLTRVLRHCATERRHKEIVHQLLRVEELKVKQELILEQSRRVTITEDTACRVPTCRRPIGNTAILCYPNGVVVHLACGRNDLHRCP 1283
            ++ KL +FL S S+ Y P+RL+    PF     L E ALLL R+G+H   L  Y   L +  +AEEYC   Y R                                          N    L  LE +  K++   A++LLPA  T +R +  +L  VL   A ++R  +++  LL  E L+VK+E I  Q  +  ITE+  CRV  C++ IGN+A   YPNGVVVH  C + D   CP
Sbjct:  647 FRNKLLKFLES-STRYEPERLISDF-PF--DGLLEERALLLGRMGKHEQALFIYVHILKDIRMAEEYCHRHYDR-----VTDGNKDVYLSLLRMYLSPPDVHCLGPIKMELLEPQANLQAALQVLELHHSKLNTTKAINLLPA-NTQIREIRVFLESVLEENAKKKRFDQVLKSLLHAEFLRVKEERIFHQQVKCIITEEKTCRV--CKKKIGNSAFARYPNGVVVHYFCCK-DRSLCP 872          
BLAST of NO19G02300 vs. NCBI_GenBank
Match: XP_015206448.1 (PREDICTED: vam6/Vps39-like protein isoform X3 [Lepisosteus oculatus])

HSP 1 Score: 99.8 bits (247), Expect = 6.800e-17
Identity = 80/239 (33.47%), Postives = 111/239 (46.44%), Query Frame = 0
Query: 1044 YQAKLREFLRSPSSLYHPQRLLPALQPFLPRAFLVEHALLLARLGQHRDVLRTYAVELNNPSLAEEYCEEVYRRKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNTPRWLACLERNFDKIDAVAALSLLPARTTTLRSLSPYLTRVLRHCATERRHKEIVHQLLRVEELKVKQELILEQSRRVTITEDTACRVPTCRRPIGNTAILCYPNGVVVHLACGRNDLHRCP 1283
            ++ KL +FL S S+ Y P+RL+    PF     L E ALLL R+G+H   L  Y   L +  +AEEYC   Y R                                          N    L  LE +  K++   A++LLPA  T +R +  +L  VL   A ++R  +++  LL  E L+VK+E I  Q  +  ITE+  CRV  C++ IGN+A   YPNGVVVH  C + D   CP
Sbjct:  647 FRNKLLKFLES-STRYEPERLISDF-PF--DGLLEERALLLGRMGKHEQALFIYVHILKDIRMAEEYCHRHYDR-----VTDGNKDVYLSLLRMYLSPPDVHCLGPIKMELLEPQANLQAALQVLELHHSKLNTTKAINLLPA-NTQIREIRVFLESVLEENAKKKRFDQVLKSLLHAEFLRVKEERIFHQQVKCIITEEKTCRV--CKKKIGNSAFARYPNGVVVHYFCCK-DRSLCP 872          
The following BLAST results are available for this feature:
BLAST of NO19G02300 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Position :
0
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50010001500200025003000350040004500500055006000Expect = 4.00e-33 / Id = 29.51Expect = 1.60e-26 / Id = 25.15Expect = 4.70e-26 / Id = 24.18Expect = 4.70e-18 / Id = 32.22Expect = 4.70e-18 / Id = 33.06Expect = 5.20e-17 / Id = 33.05Expect = 6.80e-17 / Id = 33.47Expect = 6.80e-17 / Id = 25.82Expect = 6.80e-17 / Id = 33.47Expect = 6.80e-17 / Id = 33.47SequenceCBJ28092.1XP_009040634.1XP_009040377.1XP_011445059.1XP_022332036.1XP_020777366.1XP_006632652.1XP_008861662.1XP_015206446.1XP_015206448.1
Match NameE-valueIdentityDescription
CBJ28092.14.000e-3329.51conserved unknown protein [Ectocarpus siliculosus][more]
XP_009040634.11.600e-2625.15hypothetical protein AURANDRAFT_72465 [Aureococcus... [more]
XP_009040377.14.700e-2624.18hypothetical protein AURANDRAFT_72369 [Aureococcus... [more]
XP_011445059.14.700e-1832.22PREDICTED: vam6/Vps39-like protein [Crassostrea gi... [more]
XP_022332036.14.700e-1833.06vam6/Vps39-like protein [Crassostrea virginica][more]
XP_020777366.15.200e-1733.05vam6/Vps39-like protein [Boleophthalmus pectiniros... [more]
XP_006632652.16.800e-1733.47PREDICTED: vam6/Vps39-like protein isoform X1 [Lep... [more]
XP_008861662.16.800e-1725.82hypothetical protein H310_00601 [Aphanomyces invad... [more]
XP_015206446.16.800e-1733.47PREDICTED: vam6/Vps39-like protein isoform X2 [Lep... [more]
XP_015206448.16.800e-1733.47PREDICTED: vam6/Vps39-like protein isoform X3 [Lep... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL012nonsL012Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR034ncniR034Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR039ngnoR039Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK004571NSK004571Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO19G02300.1NO19G02300.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|672885gene_7631Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100923g1gene6731Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO19G02300.1NO19G02300.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO19G02300 ID=NO19G02300|Name=NO19G02300|organism=Nannochloropsis oceanica|type=gene|length=6291bp
ATGGCAGTCATCGATCCCAACGACGACGGCGCGTCACCTCACATGGAGGG
CCCGACCATTACATGGCAAGGGGTGGAGGCACGCATCAAGGATCTGCTGG
CAGCAGGTGTGAAGGAGAGgtacggaggttgatacaagcggagataggga
gggacaaggggagagtcggaagaggaggaacggaagagatctgagctcat
cccggggtacccggatgaaggaacgccccatggcctccggcttcggaccc
catatacgcacacacgcaatgatcggcacaatccttaaatgtcttgacgc
tcctcttcgtcttaatgttgtgtggtggttgcatgcacagGGCCTGTGGG
GAAACATCCACCCTTACGCACCCGCAGCAGTCTCTTGCGGAACACCGCCT
CATCACGGCCTTCCTTCATCAGCAAGCACCAGGCATGCCGGCGCCTTTAT
CAGCGCCCTCGTCGTCCCAACCCCACCCGCAGCCCCCGCCATCCCCTCCC
AACATCCGCAATGCCTTTGACCCTCGCCCCTTGCATGGTTCGGACCTGGC
CGCTGCTCGGTTGGAGTCGGCCGCCGTCACGGGGGAAGGACGCAGGCTGT
GGGTCGGGACAAGTGATGGgtacgtctgacgtttgtgccctcctcttctc
tcctttgttttgattcttattcttcatgcccatttgatgcaaactgatag
aggcatatgatttgctggcattgccttccttagttgaagccctaacatca
ttcctaccctcccttgctccctccctctctcccttgcttcattcactgct
ttgcttgccgtctacgcgtagtcctcccttccatgaaaccttgggacatg
tctttcctcacgccttcattcccccctttttattatcctccctctatgac
tccttcagTCTTCTCCAAGCGTACGACATCGACCCCACCACCGGCACCAC
CACCCTTTCCTTCTCCTCCTCTCCTTCTCCTTCCTCCTCCTCCTCCCGAA
GCACCTCCTTTAAAGCCCCAATAACTCAATTAAGGGCTATCCCGGCTTGG
GGCGTTTTGATGGGTGTAGTGGATGGTAGTTGCCTGACCGCCTTCCATCT
CGACACGGGCCTTCCCCTTTCTACCTTGAACGTGAACGATGCAACAACAA
CAGCAGCAGCAGCAACAGCAGCAGCAACAGCATCAACATTTACAATAAGG
AGGGTATCCACCTCCACCTCCTCCTCCTCCTCGTCTTCCTCCTCCTTTTC
CTCCTCCTCCTCCTCCTCCTCCTCATGTCAGTTGTTTGCAGTCCAATCCG
AAACCCGACAGCTCTGTGCGTTGGTAGCACCTGCAGCAGCAACAGGAGCA
GCAGCAGGAGCAGGAGTGGGGCTAGGGTCAGGAGGAAGCTTCAAAGGAGG
GGTGGGTGGGAGTAGTAATACTGGCAGTGGCAGCAGCAACAGTGGTCAAG
GCCTCAAGTTGCTGGTCATGATATGGGATGGTGGGAACGAGGGAGCGGGC
TCCCTGCAGGTGAGGAGGGAGGTGGGACTACTGGGGTGTGAGGGCATTCC
CCGGGCGATGGTGATGACGACGGAAGCGTGTTTCCTGGCCTGGAGCAAAG
GGTGTGGCGCCATATCCCTCTACGGAGGAGGAGGGAGGGAGGGAGGGAGG
GAAGGAGGAAGGGCGACCGGCCCAGTGGTGACGTCGACGGTGTCGACGGT
GTATGAGCCGGAATCTGAACACCTCTTGTCGGCGTTGGTGGTTCTTCCCC
CCCTCCCTCCCCCCAGCCCTGCTCCTCCTCGCCTCCTCCTATCCGATGGC
AGCCGAGGCGTCTGTTTTCAGTTGACCCCCTCCTCTGTCGCTGCCTCCTC
CTCGTCCTCCTCCACGTCCTCCCCCTTCGATGACGACGACAGCCCCCACC
ATTACCACGACCGACGAGCCTTCCACCCTCCCTCCTTTCCTGCCTCCGCC
TCCTCCGCTTCCAACCACCTCGCCCTTCTTCCCTGCCTCCCCCACGACAA
GCTCACGTGGCATGCGCCTCCAAAGGCAAGCCAGGTCGTCCTCCCCTTCC
TCGTCTCCCTCCTCGTCCAGTCGGAAGAGCAGGGAGGGAGGGAGGGCGGG
AGGGAGGGAGGAGTATGGGTGGAAATCCACGACCTGTCTTCCTTGGCTGC
CCTACAGCTAATTCCGCTGATGGTAGGGGGAGGGAGGGAGGGAGGGAGGG
GGGGAGGGATGGGTGCCGAGCTTTGTGCCTGTCGGATGGCGCTGGGCCGG
GCGGAAAACGTCTATGTCTCCTTCCCCCCTTCCTTCCTCCCTCCCTCAGC
CGCCGCCTCCTCCTCCTTCTTATTTCGGAGGCGGGAGGGCGGGCGGGAGG
GCGGGGGGGAGGGAGGAAGAGTGGTGTGTCTGACCATGCTCCCCCTGGTG
ACTCAGATAGATCGATTAGTGGGGCTCGGGCAGCACCGGCAAGCCCTGAC
GCTGGCTGCGCTGGTGGAGGGGGAGGGCAGGGGGGAGGGCGGGGAGTGGT
TGGCGGAGATTGATTTGCCGAGAGTGCGTGAGGGGTTCGCGGGTGTGTTG
TGTGGGAAGGGGCAATACGGCGAGGCGGTGAGGGAGTGGCTGCAGgcaag
gaaggagggagcgagggagaggggaagggaggaaggaagggaggtgggag
agagggagggagggagggaagcgcccaattcattccagactttgggtcat
tcggtcactaattttggaatggggggatattagtctagacacgtctactc
atccctccctccctccctccctccctccctccctcccctcctccctcccc
cccagGCCGACACCCCCCCCGCCATTGTCCTGGCCCACTTCTCCTCCCTC
TTCCCTCCCGACCTCGCCCTCCCTCCGTCCCTCAAGTCGCTGGTGGGAAA
GAAGAAGAAGAGCCAGCCATCTGCCCGAGCGGGGGGGAGCGCGGACGCCA
TCCCGGgtaagggagggagggaggaagggagggccagaaggaggatggga
gggcgggagggaaggaggcagggcgaatgggcgggaggggtccaagtaac
acgatataacacgatgtaacaactgtgattagccctcctgaccccctcct
ccttccctctttccctccttcccttgcagCCGCCCACGTGCCCAAGGCCT
CGGTGGCCCTCCTCGCCTTTCTTCAGCACCACCGCCGTTCCTTCAAAGAG
ATGGCGGACAAACACCACGCCGGCGGGGGGGAGCGGGAGGGCGGGAAGGA
GGGAGGGGTGGAGGAGGAGGTGAGGGGCATGGCCGTGTTTGTTGACACGA
TGATAGTGCTGTCCGCGGCGAGGGGGGGAAAGAAGGAGGAGGCCGTGGCG
CTCTTGGCTGGAGGAGCCAACCGgtgaggaggaagagagggagggaggga
gggagggagggagggagggagggagggagggagggagggagggagggagg
gagggagggagggagggaaggaagtctcttggttgtttgctgtgcaggtc
cgagcgagatcagtgagacactcacacacctttccttcctccctcccttc
ctctctctctctcttatacacacacatacacacacacgaagacagtacga
gaaacactccctcgctaacacacacacacacacacacacacacacatata
tatatatatatatatatatatatatacccacactgtagGGCGGATGTGGA
TGCGTGTGCCCCCGTACTGGCAGCCCAAGGCGCGCCCTTCATCGAGGCCC
TCCTATGGCTCTACCGTTCGCACGgtaagctctccctccctccctccctc
tctccctccctccctccctccctccactttcgtctttcactttcttctat
ccactgaattccaccccacctccctccctccccccctccctcagACCTCC
ATGCCCAAGCCCTGTCACTCCTGCACGAGGACCGGTGCGTGGCGAGGGAG
GGAGGGAGGGAGGGAGGGAGGGGTTGGACGCTCTCCCAATTCCATGCCTG
GACAGCAGACTACCTCTCCTCTCTCTGGCACGCCGCCCCTCCCTCCCCCC
CTTCCTCCCCCCCTCCCTCCTCCCTTGTCCTGGCCCATCTCCGGCCTCTC
CTCGAGGGGAATCCGAAGCTTGGGCTGGGGGTGTTGgtgggggggaggga
gggaaagagggagagaagggagggagggagggagggagggagggagggaa
gggggtcagtcctcaggaagtattggcgatcctgaagGAGAGCAAGCCGA
GGGTAGTGGAGGCGGATTGGAAGGCGGCGATGAGAAAGGGAGAGAGGGAG
GGAGGAGGAGAGGGAGGGAGGGGAAGTTTGTTCTACAAGAGTGCAGGGAG
CACAGTGGCCTTGCCACTTGTAACGGGCGCGACGCTGGCGATGGCGTACC
TTGACTACTTGATTGgtgagggcgagggggagggagggagggagggaggg
tatcgcactcatgtgcggtgtttatgaatcctcaccctccctccctccct
ccctccctccctccctccctccctccctccctccctacctccctccccat
cagACGCCGGGCAAGCCCCTCCTGCGCTGCATGACGAATATTTCCTCCTC
CTCCTCACGGCCCTTCTCTCGGAGCAGGGCGAGGAGGAGGGAGGGGAGGA
GGAAGGGGAGAAGAAGAAGGAGgtaagggagggagggagggagggaggaa
gggaggaaaggggattttgatttatcgtccccagcggtaacgtgtcggtc
ttccctttctctcctcccctccctccctccctctctcctccctccctccc
tcccccagCCCCTGACCCCTCTCGGGCTCCTCTACCAAGCCAAACTCCGT
GAGTTTCTCCGCTCCCCCTCCTCGCTCTACCACCCCCAACGCCTTCTTCC
CGCCCTCCAGCCCTTCCTCCCCCGGGCCTTCCTCGTCGAACATGCCCTCC
TCCTGGCCCGTTTGGGGCAGCACCGTGATGTTTTACGTACCTACGCTGTG
GAGTTGAACAATCCGTCGTTGGCGGAAGAATATTGCGAGGAAGTGTACAG
GAGGAAGGGAGGGAGGGAGGGAGGAAGCGGGGGAGGAAGGGGGGAGGTGT
ACTTGGACTTAGTGCGGGTTTATTTGCAGCAGGAGGAGGAGGACAAGAAA
GAGGGAGGGAGGGAGGGCGGGAAGGAGGCGAACACGCCACGGTGGCTTGC
GTGTTTGGAGAGAAACTTCGACAAGATCGATGCAGgtaaggccctgccct
cccaccctccctccctccctccctccctccctcccttcctcttttcatcg
tcacctttccctccccccatccccagTGGCAGCTCTCTCCCTCCTCCCAG
CCCGTACCACCACCCTTCGCTCCCTCTCTCCCTACCTCACCCGCGTCCTC
CGGCACTGTGCAACCGAGCGCCGACATAAGGAGATCGTGCATCAGgtacc
cctccctccctccctccctccttgaatgcctccgtctaagccatcagcag
atctgcctcacccctcactctcttccttggttcctctttccctcccaccc
tctctcagCTCCTCCGCGTTGAAGAGCTCAAGGTCAAACAAGAATTAATC
CTCGAGCAGTCTCGGCGTGTCACCATCACGGAAGACACCGCCTGCCGCGT
CCCCACCTGTCGACGGCCCATTGgtaagcaagcccttcctctttccccct
atccatgcctcctattcgccctctgtgtgtgtcacccatcaccaaattcg
ctgtctacctccctccctccctccctccctccctttcttctgtcttccat
gaaaagcacggtcaatctgcgccgctcaatctcccttccctccttccttc
cttccttccttcccccctccctccctctctccctccctccttcccttcct
cccgtcctagGCAACACGGCCATCCTCTGCTACCCCAATGGCGTAGTTGT
CCATCTGGCCTGTGGCCGCAACGATCTGCACCGCTGTCCGGTCACTGGAG
AAGTCTTCACGACGCCAGGAGAGGAGCGGTAAAGCGACACCCTCCCTCCC
TCCCTCCCTCCCACCATTCCTGTCCTGCCCCTCTCTGGTGGTGGTGCGAG
ACGGCATGCTATCGCTTGGAAAACGAGTTCGGCTCCTGCATGGAGGGGGG
AAGAGTTAAAAAAAGAGGGGTGGGAGGGAGGGAGGAGGGAGGGAGGGAGG
GAGGTCATAAGCCATCACCTCCTACACAAATAGAAGGAAAAGGAAAGACA
AACGGTGTGTATGTAGGTATTCAAAGAAAAAGCACAATGGT
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protein sequence of NO19G02300.1

>NO19G02300.1-protein ID=NO19G02300.1-protein|Name=NO19G02300.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1296bp
MAVIDPNDDGASPHMEGPTITWQGVEARIKDLLAAGVKERACGETSTLTH
PQQSLAEHRLITAFLHQQAPGMPAPLSAPSSSQPHPQPPPSPPNIRNAFD
PRPLHGSDLAAARLESAAVTGEGRRLWVGTSDGLLQAYDIDPTTGTTTLS
FSSSPSPSSSSSRSTSFKAPITQLRAIPAWGVLMGVVDGSCLTAFHLDTG
LPLSTLNVNDATTTAAAATAAATASTFTIRRVSTSTSSSSSSSSSFSSSS
SSSSSCQLFAVQSETRQLCALVAPAAATGAAAGAGVGLGSGGSFKGGVGG
SSNTGSGSSNSGQGLKLLVMIWDGGNEGAGSLQVRREVGLLGCEGIPRAM
VMTTEACFLAWSKGCGAISLYGGGGREGGREGGRATGPVVTSTVSTVYEP
ESEHLLSALVVLPPLPPPSPAPPRLLLSDGSRGVCFQLTPSSVAASSSSS
STSSPFDDDDSPHHYHDRRAFHPPSFPASASSASNHLALLPCLPHDKLTW
HAPPKASQVVLPFLVSLLVQSEEQGGREGGREGGVWVEIHDLSSLAALQL
IPLMVGGGREGGRGGGMGAELCACRMALGRAENVYVSFPPSFLPPSAAAS
SSFLFRRREGGREGGGEGGRVVCLTMLPLVTQIDRLVGLGQHRQALTLAA
LVEGEGRGEGGEWLAEIDLPRVREGFAGVLCGKGQYGEAVREWLQADTPP
AIVLAHFSSLFPPDLALPPSLKSLVGKKKKSQPSARAGGSADAIPAAHVP
KASVALLAFLQHHRRSFKEMADKHHAGGGEREGGKEGGVEEEVRGMAVFV
DTMIVLSAARGGKKEEAVALLAGGANRADVDACAPVLAAQGAPFIEALLW
LYRSHDLHAQALSLLHEDRCVAREGGREGGRGWTLSQFHAWTADYLSSLW
HAAPPSPPSSPPPSSLVLAHLRPLLEGNPKLGLGVLESKPRVVEADWKAA
MRKGEREGGGEGGRGSLFYKSAGSTVALPLVTGATLAMAYLDYLIDAGQA
PPALHDEYFLLLLTALLSEQGEEEGGEEEGEKKKEPLTPLGLLYQAKLRE
FLRSPSSLYHPQRLLPALQPFLPRAFLVEHALLLARLGQHRDVLRTYAVE
LNNPSLAEEYCEEVYRRKGGREGGSGGGRGEVYLDLVRVYLQQEEEDKKE
GGREGGKEANTPRWLACLERNFDKIDAVAALSLLPARTTTLRSLSPYLTR
VLRHCATERRHKEIVHQLLRVEELKVKQELILEQSRRVTITEDTACRVPT
CRRPIGNTAILCYPNGVVVHLACGRNDLHRCPVTGEVFTTPGEER*
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Synonyms
Publications