NO19G02300.1, NO19G02300.1 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO19G02300.1
Unique Name	NO19G02300.1
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	4147
Alignment location	chr19:658619..664909 +

Link to JBrowse

Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr19	genome	chr19:658619..664909 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica IMET1	2017-10-24
Homology annotation for N. oceanica IMET1	2017-10-25
InterPro analysis for N. oceanica IMET1	2017-10-25

Annotated Terms

Homology

[Close]

BLAST of NO19G02300.1 vs.
Match: XP_009040377.1 (hypothetical protein AURANDRAFT_72369 [Aureococcus anophagefferens]; EGB05026.1 hypothetical protein AURANDRAFT_72369 [Aureococcus anophagefferens])

HSP 1 Score: 176.8 bits (447), Expect = 4.400e-40
Identity = 226/846 (26.71%), Postives = 336/846 (39.72%), Query Frame = 0

Query:  496 DKLTWHAPPKASQVVLPFLVSLLVQSEEQGGREGGREGGVWVEIHDLSSLAALQLIPLMVGGGREGGRGGGMGAELCA-CRMALGRAENVYVSFPPSFLPPSAAASSSFLFRRREGGREGG----------GEGGRVVCLTMLPLVTQIDRLVGLGQHRQALTLAALVEGEGRGEGGEWLAEIDLPRVREGFAGVLCGKGQYGEAVREWLQADTPPAIVLAHFSSLFPPDLALPPSLKSLVGK----KKKSQPSARAGGSADAIPAAHVPKASVALLAFLQHHRRSFKEMADKHHAGGGEREGGKEGGVEEEVRGMAVFVDTMIVLSAARGG--KKEEAVALLAGGANRADVDACAPVLAAQGAPFIEALLWLYRSHDLHAQALSLLHEDRCVAREGGREGGRGWTLSQFHAWTADYLSSLWHAAPPSPPSSPPPSSLVLAHLRPLLEGNPKLGLGVLESKPRVVEAD-------------------WKAAMRKGEREGGGEGGRGSLFYK-------SAGSTVALPLVTGATLAMAYLDYLIDAGQAPPALHDEYFLLLLTALLSEQGEEEGGEEEGEKKKEPLTPLGLLYQAKLREFLRSPSSLYHPQRLLPALQPFLPRAFLVEHALLLARLGQHRDVLRTYAVELNNPSLAEEYCEEVYRRKGGREGGSGGGR---------------GEVYLDLVRVYLQQEEEDKKEGGREGGKEANTPRWLACLERNFDKIDAVAALSLLPARTTTLRSLSPYLTRVLRHCATERRHKEIVHQLLRVEELKVKQEL----ILEQSRRVTITEDTAC-RVPTCRRPIGNTAILCYPNGVVVHLACGRNDL 1279
            +++TW   P   +    F+V LL               G  +E+H + SLA +Q I L  GG       GG+  EL   C    G   NV     P+  P S   +   +  +      GG          G+ G  V L M  +  Q+  L+   Q+  AL L A    +  G         D   V E +A  L  +G +  A + WL A+T P  V   F S+ PP+L+    L+S  G+    +  S+    A  S   +  A + +A+ A+ +F +  RR     + +     G     K     E V      VDTM++    +    + ++ VALL     R +++  AP+LAA GA + E LLWLYRS   H +AL+LL E RC     G      W   QF  W   YL  LW +           ++L L H   +   +P LGL V       ++ D                   W   + K      GE   G  F++         G+  +L L  GA +A  YL+YL+ AG+  P LH+E   LLL  L     +  GG +              +Y+  LR FL   S  Y  +  L     +LP  FL E AL+LAR+  H+ VL+ YA+ L +  LAE+YCE ++    G    S   R                +VY  L  +Y  Q                   + L  + RN +++     L+ LP    +L   + +   ++R   +ERR   + H L RVE + +K EL    I +QS    + E  +  RV     P+      C   G   H++C R+ L
Sbjct:  446 ERITWTTAPIMLKSTSAFIVGLL---------------GNTLEVHFIPSLALVQKISLE-GGFIATTLCGGVRDELADDCESNTGDFLNV-TDISPALKPLSKLDAMRNMSNQTRSRNSGGTPSLDDLFCLGDTGGFV-LRMTSVDDQVQNLLDSAQYEDALALCASSARKFHG---------DSRLVEERYAYALYSRGDFEGASQHWLNAETAPQAVADLFPSIRPPELSTRLGLRSDDGEFAVLETVSREKHHALSSMPLLRGASLSRAAAAIASFFEITRRRLNARSSE-----GSMLDYKN---TETVCDQLALVDTMLIAVWLQCSPPRIKDVVALLRDPGQRCELEYVAPLLAAGGAVYAEPLLWLYRSKHAHQRALALLVETRCCGDVNG-----AWDRVQFLRWKTRYLQWLWFS------DDQRNTNLALEHAPSVFAASPALGLAVFTGTLVDIQGDEDPLEVPLSVRVPAYDVVTWMKDL-KLRAVQAGEKSSGPSFWQVPPCLSCELGAGGSLALDDGAAVACVYLEYLVSAGEDSPMLHNELGYLLLDGL-----KRIGGSDHESSS---------IYRQWLRTFLMR-SKNYDAKAQL----SWLPETFLHERALVLARMQNHKAVLKIYAISLRDDKLAEDYCENIW----GEATQSRDTRLVTEPHNPEILSNTASDVYTTLANIYASQLVIQHSTTDATLPCAVALGKALGFMHRNLNRLHPAKVLNALPV-DLSLSCYAKFTEALIRSSESERRAALVQHNLRRVEFVNLKYELTRQQIKQQSTMSAVPELASLGRVKRSLTPV--VLSECTEGGEAYHVSCTRHAL 1218

The following BLAST results are available for this feature:

BLAST of NO19G02300.1 vs.

BLAST of NO19G02300.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1


Match Name	E-value	Identity	Description
XP_009040377.1	4.400e-40	26.71	hypothetical protein AURANDRAFT_72369 [Aureococcus...	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO19G02300	NO19G02300	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
NO19G02300.1	NO19G02300.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
NO19G02300.1.cds1	NO19G02300.1.cds1	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO19G02300.1.cds2	NO19G02300.1.cds2	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO19G02300.1.cds3	NO19G02300.1.cds3	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO19G02300.1.cds4	NO19G02300.1.cds4	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO19G02300.1.cds5	NO19G02300.1.cds5	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO19G02300.1.cds6	NO19G02300.1.cds6	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO19G02300.1.cds7	NO19G02300.1.cds7	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO19G02300.1.cds8	NO19G02300.1.cds8	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO19G02300.1.cds9	NO19G02300.1.cds9	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO19G02300.1.cds10	NO19G02300.1.cds10	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO19G02300.1.cds11	NO19G02300.1.cds11	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO19G02300.1.cds12	NO19G02300.1.cds12	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO19G02300.1.cds13	NO19G02300.1.cds13	Nannochloropsis oceanica (N. oceanica IMET1)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr19:658619..664909+
coding sequence from alignment at chr19:658619..664909+

mRNA sequence

>NO19G02300.1 ID=NO19G02300.1|Name=NO19G02300.1|organism=Nannochloropsis oceanica|type=mRNA|length=4147bp
ATGGCAGTCATCGATCCCAACGACGACGGCGCGTCACCTCACATGGAGGG
CCCGACCATTACATGGCAAGGGGTGGAGGCACGCATCAAGGATCTGCTGG
CAGCAGGTGTGAAGGAGAGGGCCTGTGGGGAAACATCCACCCTTACGCAC
CCGCAGCAGTCTCTTGCGGAACACCGCCTCATCACGGCCTTCCTTCATCA
GCAAGCACCAGGCATGCCGGCGCCTTTATCAGCGCCCTCGTCGTCCCAAC
CCCACCCGCAGCCCCCGCCATCCCCTCCCAACATCCGCAATGCCTTTGAC
CCTCGCCCCTTGCATGGTTCGGACCTGGCCGCTGCTCGGTTGGAGTCGGC
CGCCGTCACGGGGGAAGGACGCAGGCTGTGGGTCGGGACAAGTGATGGTC
TTCTCCAAGCGTACGACATCGACCCCACCACCGGCACCACCACCCTTTCC
TTCTCCTCCTCTCCTTCTCCTTCCTCCTCCTCCTCCCGAAGCACCTCCTT
TAAAGCCCCAATAACTCAATTAAGGGCTATCCCGGCTTGGGGCGTTTTGA
TGGGTGTAGTGGATGGTAGTTGCCTGACCGCCTTCCATCTCGACACGGGC
CTTCCCCTTTCTACCTTGAACGTGAACGATGCAACAACAACAGCAGCAGC
AGCAACAGCAGCAGCAACAGCATCAACATTTACAATAAGGAGGGTATCCA
CCTCCACCTCCTCCTCCTCCTCGTCTTCCTCCTCCTTTTCCTCCTCCTCC
TCCTCCTCCTCCTCATGTCAGTTGTTTGCAGTCCAATCCGAAACCCGACA
GCTCTGTGCGTTGGTAGCACCTGCAGCAGCAACAGGAGCAGCAGCAGGAG
CAGGAGTGGGGCTAGGGTCAGGAGGAAGCTTCAAAGGAGGGGTGGGTGGG
AGTAGTAATACTGGCAGTGGCAGCAGCAACAGTGGTCAAGGCCTCAAGTT
GCTGGTCATGATATGGGATGGTGGGAACGAGGGAGCGGGCTCCCTGCAGG
TGAGGAGGGAGGTGGGACTACTGGGGTGTGAGGGCATTCCCCGGGCGATG
GTGATGACGACGGAAGCGTGTTTCCTGGCCTGGAGCAAAGGGTGTGGCGC
CATATCCCTCTACGGAGGAGGAGGGAGGGAGGGAGGGAGGGAAGGAGGAA
GGGCGACCGGCCCAGTGGTGACGTCGACGGTGTCGACGGTGTATGAGCCG
GAATCTGAACACCTCTTGTCGGCGTTGGTGGTTCTTCCCCCCCTCCCTCC
CCCCAGCCCTGCTCCTCCTCGCCTCCTCCTATCCGATGGCAGCCGAGGCG
TCTGTTTTCAGTTGACCCCCTCCTCTGTCGCTGCCTCCTCCTCGTCCTCC
TCCACGTCCTCCCCCTTCGATGACGACGACAGCCCCCACCATTACCACGA
CCGACGAGCCTTCCACCCTCCCTCCTTTCCTGCCTCCGCCTCCTCCGCTT
CCAACCACCTCGCCCTTCTTCCCTGCCTCCCCCACGACAAGCTCACGTGG
CATGCGCCTCCAAAGGCAAGCCAGGTCGTCCTCCCCTTCCTCGTCTCCCT
CCTCGTCCAGTCGGAAGAGCAGGGAGGGAGGGAGGGCGGGAGGGAGGGAG
GAGTATGGGTGGAAATCCACGACCTGTCTTCCTTGGCTGCCCTACAGCTA
ATTCCGCTGATGGTAGGGGGAGGGAGGGAGGGAGGGAGGGGGGGAGGGAT
GGGTGCCGAGCTTTGTGCCTGTCGGATGGCGCTGGGCCGGGCGGAAAACG
TCTATGTCTCCTTCCCCCCTTCCTTCCTCCCTCCCTCAGCCGCCGCCTCC
TCCTCCTTCTTATTTCGGAGGCGGGAGGGCGGGCGGGAGGGCGGGGGGGA
GGGAGGAAGAGTGGTGTGTCTGACCATGCTCCCCCTGGTGACTCAGATAG
ATCGATTAGTGGGGCTCGGGCAGCACCGGCAAGCCCTGACGCTGGCTGCG
CTGGTGGAGGGGGAGGGCAGGGGGGAGGGCGGGGAGTGGTTGGCGGAGAT
TGATTTGCCGAGAGTGCGTGAGGGGTTCGCGGGTGTGTTGTGTGGGAAGG
GGCAATACGGCGAGGCGGTGAGGGAGTGGCTGCAGGCCGACACCCCCCCC
GCCATTGTCCTGGCCCACTTCTCCTCCCTCTTCCCTCCCGACCTCGCCCT
CCCTCCGTCCCTCAAGTCGCTGGTGGGAAAGAAGAAGAAGAGCCAGCCAT
CTGCCCGAGCGGGGGGGAGCGCGGACGCCATCCCGGCCGCCCACGTGCCC
AAGGCCTCGGTGGCCCTCCTCGCCTTTCTTCAGCACCACCGCCGTTCCTT
CAAAGAGATGGCGGACAAACACCACGCCGGCGGGGGGGAGCGGGAGGGCG
GGAAGGAGGGAGGGGTGGAGGAGGAGGTGAGGGGCATGGCCGTGTTTGTT
GACACGATGATAGTGCTGTCCGCGGCGAGGGGGGGAAAGAAGGAGGAGGC
CGTGGCGCTCTTGGCTGGAGGAGCCAACCGGGCGGATGTGGATGCGTGTG
CCCCCGTACTGGCAGCCCAAGGCGCGCCCTTCATCGAGGCCCTCCTATGG
CTCTACCGTTCGCACGACCTCCATGCCCAAGCCCTGTCACTCCTGCACGA
GGACCGGTGCGTGGCGAGGGAGGGAGGGAGGGAGGGAGGGAGGGGTTGGA
CGCTCTCCCAATTCCATGCCTGGACAGCAGACTACCTCTCCTCTCTCTGG
CACGCCGCCCCTCCCTCCCCCCCTTCCTCCCCCCCTCCCTCCTCCCTTGT
CCTGGCCCATCTCCGGCCTCTCCTCGAGGGGAATCCGAAGCTTGGGCTGG
GGGTGTTGGAGAGCAAGCCGAGGGTAGTGGAGGCGGATTGGAAGGCGGCG
ATGAGAAAGGGAGAGAGGGAGGGAGGAGGAGAGGGAGGGAGGGGAAGTTT
GTTCTACAAGAGTGCAGGGAGCACAGTGGCCTTGCCACTTGTAACGGGCG
CGACGCTGGCGATGGCGTACCTTGACTACTTGATTGACGCCGGGCAAGCC
CCTCCTGCGCTGCATGACGAATATTTCCTCCTCCTCCTCACGGCCCTTCT
CTCGGAGCAGGGCGAGGAGGAGGGAGGGGAGGAGGAAGGGGAGAAGAAGA
AGGAGCCCCTGACCCCTCTCGGGCTCCTCTACCAAGCCAAACTCCGTGAG
TTTCTCCGCTCCCCCTCCTCGCTCTACCACCCCCAACGCCTTCTTCCCGC
CCTCCAGCCCTTCCTCCCCCGGGCCTTCCTCGTCGAACATGCCCTCCTCC
TGGCCCGTTTGGGGCAGCACCGTGATGTTTTACGTACCTACGCTGTGGAG
TTGAACAATCCGTCGTTGGCGGAAGAATATTGCGAGGAAGTGTACAGGAG
GAAGGGAGGGAGGGAGGGAGGAAGCGGGGGAGGAAGGGGGGAGGTGTACT
TGGACTTAGTGCGGGTTTATTTGCAGCAGGAGGAGGAGGACAAGAAAGAG
GGAGGGAGGGAGGGCGGGAAGGAGGCGAACACGCCACGGTGGCTTGCGTG
TTTGGAGAGAAACTTCGACAAGATCGATGCAGTGGCAGCTCTCTCCCTCC
TCCCAGCCCGTACCACCACCCTTCGCTCCCTCTCTCCCTACCTCACCCGC
GTCCTCCGGCACTGTGCAACCGAGCGCCGACATAAGGAGATCGTGCATCA
GCTCCTCCGCGTTGAAGAGCTCAAGGTCAAACAAGAATTAATCCTCGAGC
AGTCTCGGCGTGTCACCATCACGGAAGACACCGCCTGCCGCGTCCCCACC
TGTCGACGGCCCATTGGCAACACGGCCATCCTCTGCTACCCCAATGGCGT
AGTTGTCCATCTGGCCTGTGGCCGCAACGATCTGCACCGCTGTCCGGTCA
CTGGAGAAGTCTTCACGACGCCAGGAGAGGAGCGGTAAAGCGACACCCTC
CCTCCCTCCCTCCCTCCCACCATTCCTGTCCTGCCCCTCTCTGGTGGTGG
TGCGAGACGGCATGCTATCGCTTGGAAAACGAGTTCGGCTCCTGCATGGA
GGGGGGAAGAGTTAAAAAAAGAGGGGTGGGAGGGAGGGAGGAGGGAGGGA
GGGAGGGAGGTCATAAGCCATCACCTCCTACACAAATAGAAGGAAAAGGA
AAGACAAACGGTGTGTATGTAGGTATTCAAAGAAAAAGCACAATGGT

protein sequence of NO19G02300.1

>NO19G02300.1-protein ID=NO19G02300.1-protein|Name=NO19G02300.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1296bp
MAVIDPNDDGASPHMEGPTITWQGVEARIKDLLAAGVKERACGETSTLTH
PQQSLAEHRLITAFLHQQAPGMPAPLSAPSSSQPHPQPPPSPPNIRNAFD
PRPLHGSDLAAARLESAAVTGEGRRLWVGTSDGLLQAYDIDPTTGTTTLS
FSSSPSPSSSSSRSTSFKAPITQLRAIPAWGVLMGVVDGSCLTAFHLDTG
LPLSTLNVNDATTTAAAATAAATASTFTIRRVSTSTSSSSSSSSSFSSSS
SSSSSCQLFAVQSETRQLCALVAPAAATGAAAGAGVGLGSGGSFKGGVGG
SSNTGSGSSNSGQGLKLLVMIWDGGNEGAGSLQVRREVGLLGCEGIPRAM
VMTTEACFLAWSKGCGAISLYGGGGREGGREGGRATGPVVTSTVSTVYEP
ESEHLLSALVVLPPLPPPSPAPPRLLLSDGSRGVCFQLTPSSVAASSSSS
STSSPFDDDDSPHHYHDRRAFHPPSFPASASSASNHLALLPCLPHDKLTW
HAPPKASQVVLPFLVSLLVQSEEQGGREGGREGGVWVEIHDLSSLAALQL
IPLMVGGGREGGRGGGMGAELCACRMALGRAENVYVSFPPSFLPPSAAAS
SSFLFRRREGGREGGGEGGRVVCLTMLPLVTQIDRLVGLGQHRQALTLAA
LVEGEGRGEGGEWLAEIDLPRVREGFAGVLCGKGQYGEAVREWLQADTPP
AIVLAHFSSLFPPDLALPPSLKSLVGKKKKSQPSARAGGSADAIPAAHVP
KASVALLAFLQHHRRSFKEMADKHHAGGGEREGGKEGGVEEEVRGMAVFV
DTMIVLSAARGGKKEEAVALLAGGANRADVDACAPVLAAQGAPFIEALLW
LYRSHDLHAQALSLLHEDRCVAREGGREGGRGWTLSQFHAWTADYLSSLW
HAAPPSPPSSPPPSSLVLAHLRPLLEGNPKLGLGVLESKPRVVEADWKAA
MRKGEREGGGEGGRGSLFYKSAGSTVALPLVTGATLAMAYLDYLIDAGQA
PPALHDEYFLLLLTALLSEQGEEEGGEEEGEKKKEPLTPLGLLYQAKLRE
FLRSPSSLYHPQRLLPALQPFLPRAFLVEHALLLARLGQHRDVLRTYAVE
LNNPSLAEEYCEEVYRRKGGREGGSGGGRGEVYLDLVRVYLQQEEEDKKE
GGREGGKEANTPRWLACLERNFDKIDAVAALSLLPARTTTLRSLSPYLTR
VLRHCATERRHKEIVHQLLRVEELKVKQELILEQSRRVTITEDTACRVPT
CRRPIGNTAILCYPNGVVVHLACGRNDLHRCPVTGEVFTTPGEER*

mRNA from alignment at chr19:658619..664909+

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>NO19G02300.1 ID=NO19G02300.1|Name=NO19G02300.1|organism=Nannochloropsis oceanica|type=mRNA|length=6291bp|location=Sequence derived from alignment at chr19:658619..664909+ (Nannochloropsis oceanica)
ATGGCAGTCATCGATCCCAACGACGACGGCGCGTCACCTCACATGGAGGG
CCCGACCATTACATGGCAAGGGGTGGAGGCACGCATCAAGGATCTGCTGG
CAGCAGGTGTGAAGGAGAGGTACGGAGGTTGATACAAGCGGAGATAGGGA
GGGACAAGGGGAGAGTCGGAAGAGGAGGAACGGAAGAGATCTGAGCTCAT
CCCGGGGTACCCGGATGAAGGAACGCCCCATGGCCTCCGGCTTCGGACCC
CATATACGCACACACGCAATGATCGGCACAATCCTTAAATGTCTTGACGC
TCCTCTTCGTCTTAATGTTGTGTGGTGGTTGCATGCACAGGGCCTGTGGG
GAAACATCCACCCTTACGCACCCGCAGCAGTCTCTTGCGGAACACCGCCT
CATCACGGCCTTCCTTCATCAGCAAGCACCAGGCATGCCGGCGCCTTTAT
CAGCGCCCTCGTCGTCCCAACCCCACCCGCAGCCCCCGCCATCCCCTCCC
AACATCCGCAATGCCTTTGACCCTCGCCCCTTGCATGGTTCGGACCTGGC
CGCTGCTCGGTTGGAGTCGGCCGCCGTCACGGGGGAAGGACGCAGGCTGT
GGGTCGGGACAAGTGATGGGTACGTCTGACGTTTGTGCCCTCCTCTTCTC
TCCTTTGTTTTGATTCTTATTCTTCATGCCCATTTGATGCAAACTGATAG
AGGCATATGATTTGCTGGCATTGCCTTCCTTAGTTGAAGCCCTAACATCA
TTCCTACCCTCCCTTGCTCCCTCCCTCTCTCCCTTGCTTCATTCACTGCT
TTGCTTGCCGTCTACGCGTAGTCCTCCCTTCCATGAAACCTTGGGACATG
TCTTTCCTCACGCCTTCATTCCCCCCTTTTTATTATCCTCCCTCTATGAC
TCCTTCAGTCTTCTCCAAGCGTACGACATCGACCCCACCACCGGCACCAC
CACCCTTTCCTTCTCCTCCTCTCCTTCTCCTTCCTCCTCCTCCTCCCGAA
GCACCTCCTTTAAAGCCCCAATAACTCAATTAAGGGCTATCCCGGCTTGG
GGCGTTTTGATGGGTGTAGTGGATGGTAGTTGCCTGACCGCCTTCCATCT
CGACACGGGCCTTCCCCTTTCTACCTTGAACGTGAACGATGCAACAACAA
CAGCAGCAGCAGCAACAGCAGCAGCAACAGCATCAACATTTACAATAAGG
AGGGTATCCACCTCCACCTCCTCCTCCTCCTCGTCTTCCTCCTCCTTTTC
CTCCTCCTCCTCCTCCTCCTCCTCATGTCAGTTGTTTGCAGTCCAATCCG
AAACCCGACAGCTCTGTGCGTTGGTAGCACCTGCAGCAGCAACAGGAGCA
GCAGCAGGAGCAGGAGTGGGGCTAGGGTCAGGAGGAAGCTTCAAAGGAGG
GGTGGGTGGGAGTAGTAATACTGGCAGTGGCAGCAGCAACAGTGGTCAAG
GCCTCAAGTTGCTGGTCATGATATGGGATGGTGGGAACGAGGGAGCGGGC
TCCCTGCAGGTGAGGAGGGAGGTGGGACTACTGGGGTGTGAGGGCATTCC
CCGGGCGATGGTGATGACGACGGAAGCGTGTTTCCTGGCCTGGAGCAAAG
GGTGTGGCGCCATATCCCTCTACGGAGGAGGAGGGAGGGAGGGAGGGAGG
GAAGGAGGAAGGGCGACCGGCCCAGTGGTGACGTCGACGGTGTCGACGGT
GTATGAGCCGGAATCTGAACACCTCTTGTCGGCGTTGGTGGTTCTTCCCC
CCCTCCCTCCCCCCAGCCCTGCTCCTCCTCGCCTCCTCCTATCCGATGGC
AGCCGAGGCGTCTGTTTTCAGTTGACCCCCTCCTCTGTCGCTGCCTCCTC
CTCGTCCTCCTCCACGTCCTCCCCCTTCGATGACGACGACAGCCCCCACC
ATTACCACGACCGACGAGCCTTCCACCCTCCCTCCTTTCCTGCCTCCGCC
TCCTCCGCTTCCAACCACCTCGCCCTTCTTCCCTGCCTCCCCCACGACAA
GCTCACGTGGCATGCGCCTCCAAAGGCAAGCCAGGTCGTCCTCCCCTTCC
TCGTCTCCCTCCTCGTCCAGTCGGAAGAGCAGGGAGGGAGGGAGGGCGGG
AGGGAGGGAGGAGTATGGGTGGAAATCCACGACCTGTCTTCCTTGGCTGC
CCTACAGCTAATTCCGCTGATGGTAGGGGGAGGGAGGGAGGGAGGGAGGG
GGGGAGGGATGGGTGCCGAGCTTTGTGCCTGTCGGATGGCGCTGGGCCGG
GCGGAAAACGTCTATGTCTCCTTCCCCCCTTCCTTCCTCCCTCCCTCAGC
CGCCGCCTCCTCCTCCTTCTTATTTCGGAGGCGGGAGGGCGGGCGGGAGG
GCGGGGGGGAGGGAGGAAGAGTGGTGTGTCTGACCATGCTCCCCCTGGTG
ACTCAGATAGATCGATTAGTGGGGCTCGGGCAGCACCGGCAAGCCCTGAC
GCTGGCTGCGCTGGTGGAGGGGGAGGGCAGGGGGGAGGGCGGGGAGTGGT
TGGCGGAGATTGATTTGCCGAGAGTGCGTGAGGGGTTCGCGGGTGTGTTG
TGTGGGAAGGGGCAATACGGCGAGGCGGTGAGGGAGTGGCTGCAGGCAAG
GAAGGAGGGAGCGAGGGAGAGGGGAAGGGAGGAAGGAAGGGAGGTGGGAG
AGAGGGAGGGAGGGAGGGAAGCGCCCAATTCATTCCAGACTTTGGGTCAT
TCGGTCACTAATTTTGGAATGGGGGGATATTAGTCTAGACACGTCTACTC
ATCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCCTCCTCCCTCCCC
CCCAGGCCGACACCCCCCCCGCCATTGTCCTGGCCCACTTCTCCTCCCTC
TTCCCTCCCGACCTCGCCCTCCCTCCGTCCCTCAAGTCGCTGGTGGGAAA
GAAGAAGAAGAGCCAGCCATCTGCCCGAGCGGGGGGGAGCGCGGACGCCA
TCCCGGGTAAGGGAGGGAGGGAGGAAGGGAGGGCCAGAAGGAGGATGGGA
GGGCGGGAGGGAAGGAGGCAGGGCGAATGGGCGGGAGGGGTCCAAGTAAC
ACGATATAACACGATGTAACAACTGTGATTAGCCCTCCTGACCCCCTCCT
CCTTCCCTCTTTCCCTCCTTCCCTTGCAGCCGCCCACGTGCCCAAGGCCT
CGGTGGCCCTCCTCGCCTTTCTTCAGCACCACCGCCGTTCCTTCAAAGAG
ATGGCGGACAAACACCACGCCGGCGGGGGGGAGCGGGAGGGCGGGAAGGA
GGGAGGGGTGGAGGAGGAGGTGAGGGGCATGGCCGTGTTTGTTGACACGA
TGATAGTGCTGTCCGCGGCGAGGGGGGGAAAGAAGGAGGAGGCCGTGGCG
CTCTTGGCTGGAGGAGCCAACCGGTGAGGAGGAAGAGAGGGAGGGAGGGA
GGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGG
GAGGGAGGGAGGGAGGGAAGGAAGTCTCTTGGTTGTTTGCTGTGCAGGTC
CGAGCGAGATCAGTGAGACACTCACACACCTTTCCTTCCTCCCTCCCTTC
CTCTCTCTCTCTCTTATACACACACATACACACACACGAAGACAGTACGA
GAAACACTCCCTCGCTAACACACACACACACACACACACACACACATATA
TATATATATATATATATATATATATACCCACACTGTAGGGCGGATGTGGA
TGCGTGTGCCCCCGTACTGGCAGCCCAAGGCGCGCCCTTCATCGAGGCCC
TCCTATGGCTCTACCGTTCGCACGGTAAGCTCTCCCTCCCTCCCTCCCTC
TCTCCCTCCCTCCCTCCCTCCCTCCACTTTCGTCTTTCACTTTCTTCTAT
CCACTGAATTCCACCCCACCTCCCTCCCTCCCCCCCTCCCTCAGACCTCC
ATGCCCAAGCCCTGTCACTCCTGCACGAGGACCGGTGCGTGGCGAGGGAG
GGAGGGAGGGAGGGAGGGAGGGGTTGGACGCTCTCCCAATTCCATGCCTG
GACAGCAGACTACCTCTCCTCTCTCTGGCACGCCGCCCCTCCCTCCCCCC
CTTCCTCCCCCCCTCCCTCCTCCCTTGTCCTGGCCCATCTCCGGCCTCTC
CTCGAGGGGAATCCGAAGCTTGGGCTGGGGGTGTTGGTGGGGGGGAGGGA
GGGAAAGAGGGAGAGAAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAA
GGGGGTCAGTCCTCAGGAAGTATTGGCGATCCTGAAGGAGAGCAAGCCGA
GGGTAGTGGAGGCGGATTGGAAGGCGGCGATGAGAAAGGGAGAGAGGGAG
GGAGGAGGAGAGGGAGGGAGGGGAAGTTTGTTCTACAAGAGTGCAGGGAG
CACAGTGGCCTTGCCACTTGTAACGGGCGCGACGCTGGCGATGGCGTACC
TTGACTACTTGATTGGTGAGGGCGAGGGGGAGGGAGGGAGGGAGGGAGGG
TATCGCACTCATGTGCGGTGTTTATGAATCCTCACCCTCCCTCCCTCCCT
CCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTACCTCCCTCCCCAT
CAGACGCCGGGCAAGCCCCTCCTGCGCTGCATGACGAATATTTCCTCCTC
CTCCTCACGGCCCTTCTCTCGGAGCAGGGCGAGGAGGAGGGAGGGGAGGA
GGAAGGGGAGAAGAAGAAGGAGGTAAGGGAGGGAGGGAGGGAGGGAGGAA
GGGAGGAAAGGGGATTTTGATTTATCGTCCCCAGCGGTAACGTGTCGGTC
TTCCCTTTCTCTCCTCCCCTCCCTCCCTCCCTCTCTCCTCCCTCCCTCCC
TCCCCCAGCCCCTGACCCCTCTCGGGCTCCTCTACCAAGCCAAACTCCGT
GAGTTTCTCCGCTCCCCCTCCTCGCTCTACCACCCCCAACGCCTTCTTCC
CGCCCTCCAGCCCTTCCTCCCCCGGGCCTTCCTCGTCGAACATGCCCTCC
TCCTGGCCCGTTTGGGGCAGCACCGTGATGTTTTACGTACCTACGCTGTG
GAGTTGAACAATCCGTCGTTGGCGGAAGAATATTGCGAGGAAGTGTACAG
GAGGAAGGGAGGGAGGGAGGGAGGAAGCGGGGGAGGAAGGGGGGAGGTGT
ACTTGGACTTAGTGCGGGTTTATTTGCAGCAGGAGGAGGAGGACAAGAAA
GAGGGAGGGAGGGAGGGCGGGAAGGAGGCGAACACGCCACGGTGGCTTGC
GTGTTTGGAGAGAAACTTCGACAAGATCGATGCAGGTAAGGCCCTGCCCT
CCCACCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTTCCTCTTTTCATCG
TCACCTTTCCCTCCCCCCATCCCCAGTGGCAGCTCTCTCCCTCCTCCCAG
CCCGTACCACCACCCTTCGCTCCCTCTCTCCCTACCTCACCCGCGTCCTC
CGGCACTGTGCAACCGAGCGCCGACATAAGGAGATCGTGCATCAGGTACC
CCTCCCTCCCTCCCTCCCTCCTTGAATGCCTCCGTCTAAGCCATCAGCAG
ATCTGCCTCACCCCTCACTCTCTTCCTTGGTTCCTCTTTCCCTCCCACCC
TCTCTCAGCTCCTCCGCGTTGAAGAGCTCAAGGTCAAACAAGAATTAATC
CTCGAGCAGTCTCGGCGTGTCACCATCACGGAAGACACCGCCTGCCGCGT
CCCCACCTGTCGACGGCCCATTGGTAAGCAAGCCCTTCCTCTTTCCCCCT
ATCCATGCCTCCTATTCGCCCTCTGTGTGTGTCACCCATCACCAAATTCG
CTGTCTACCTCCCTCCCTCCCTCCCTCCCTCCCTTTCTTCTGTCTTCCAT
GAAAAGCACGGTCAATCTGCGCCGCTCAATCTCCCTTCCCTCCTTCCTTC
CTTCCTTCCTTCCCCCCTCCCTCCCTCTCTCCCTCCCTCCTTCCCTTCCT
CCCGTCCTAGGCAACACGGCCATCCTCTGCTACCCCAATGGCGTAGTTGT
CCATCTGGCCTGTGGCCGCAACGATCTGCACCGCTGTCCGGTCACTGGAG
AAGTCTTCACGACGCCAGGAGAGGAGCGGTAAAGCGACACCCTCCCTCCC
TCCCTCCCTCCCACCATTCCTGTCCTGCCCCTCTCTGGTGGTGGTGCGAG
ACGGCATGCTATCGCTTGGAAAACGAGTTCGGCTCCTGCATGGAGGGGGG
AAGAGTTAAAAAAAGAGGGGTGGGAGGGAGGGAGGAGGGAGGGAGGGAGG
GAGGTCATAAGCCATCACCTCCTACACAAATAGAAGGAAAAGGAAAGACA
AACGGTGTGTATGTAGGTATTCAAAGAAAAAGCACAATGGT

Coding sequence (CDS) from alignment at chr19:658619..664909+

>NO19G02300.1 ID=NO19G02300.1|Name=NO19G02300.1|organism=Nannochloropsis oceanica|type=CDS|length=3888bp|location=Sequence derived from alignment at chr19:658619..664909+ (Nannochloropsis oceanica)
ATGGCAGTCATCGATCCCAACGACGACGGCGCGTCACCTCACATGGAGGG
CCCGACCATTACATGGCAAGGGGTGGAGGCACGCATCAAGGATCTGCTGG
CAGCAGGTGTGAAGGAGAGGGCCTGTGGGGAAACATCCACCCTTACGCAC
CCGCAGCAGTCTCTTGCGGAACACCGCCTCATCACGGCCTTCCTTCATCA
GCAAGCACCAGGCATGCCGGCGCCTTTATCAGCGCCCTCGTCGTCCCAAC
CCCACCCGCAGCCCCCGCCATCCCCTCCCAACATCCGCAATGCCTTTGAC
CCTCGCCCCTTGCATGGTTCGGACCTGGCCGCTGCTCGGTTGGAGTCGGC
CGCCGTCACGGGGGAAGGACGCAGGCTGTGGGTCGGGACAAGTGATGGTC
TTCTCCAAGCGTACGACATCGACCCCACCACCGGCACCACCACCCTTTCC
TTCTCCTCCTCTCCTTCTCCTTCCTCCTCCTCCTCCCGAAGCACCTCCTT
TAAAGCCCCAATAACTCAATTAAGGGCTATCCCGGCTTGGGGCGTTTTGA
TGGGTGTAGTGGATGGTAGTTGCCTGACCGCCTTCCATCTCGACACGGGC
CTTCCCCTTTCTACCTTGAACGTGAACGATGCAACAACAACAGCAGCAGC
AGCAACAGCAGCAGCAACAGCATCAACATTTACAATAAGGAGGGTATCCA
CCTCCACCTCCTCCTCCTCCTCGTCTTCCTCCTCCTTTTCCTCCTCCTCC
TCCTCCTCCTCCTCATGTCAGTTGTTTGCAGTCCAATCCGAAACCCGACA
GCTCTGTGCGTTGGTAGCACCTGCAGCAGCAACAGGAGCAGCAGCAGGAG
CAGGAGTGGGGCTAGGGTCAGGAGGAAGCTTCAAAGGAGGGGTGGGTGGG
AGTAGTAATACTGGCAGTGGCAGCAGCAACAGTGGTCAAGGCCTCAAGTT
GCTGGTCATGATATGGGATGGTGGGAACGAGGGAGCGGGCTCCCTGCAGG
TGAGGAGGGAGGTGGGACTACTGGGGTGTGAGGGCATTCCCCGGGCGATG
GTGATGACGACGGAAGCGTGTTTCCTGGCCTGGAGCAAAGGGTGTGGCGC
CATATCCCTCTACGGAGGAGGAGGGAGGGAGGGAGGGAGGGAAGGAGGAA
GGGCGACCGGCCCAGTGGTGACGTCGACGGTGTCGACGGTGTATGAGCCG
GAATCTGAACACCTCTTGTCGGCGTTGGTGGTTCTTCCCCCCCTCCCTCC
CCCCAGCCCTGCTCCTCCTCGCCTCCTCCTATCCGATGGCAGCCGAGGCG
TCTGTTTTCAGTTGACCCCCTCCTCTGTCGCTGCCTCCTCCTCGTCCTCC
TCCACGTCCTCCCCCTTCGATGACGACGACAGCCCCCACCATTACCACGA
CCGACGAGCCTTCCACCCTCCCTCCTTTCCTGCCTCCGCCTCCTCCGCTT
CCAACCACCTCGCCCTTCTTCCCTGCCTCCCCCACGACAAGCTCACGTGG
CATGCGCCTCCAAAGGCAAGCCAGGTCGTCCTCCCCTTCCTCGTCTCCCT
CCTCGTCCAGTCGGAAGAGCAGGGAGGGAGGGAGGGCGGGAGGGAGGGAG
GAGTATGGGTGGAAATCCACGACCTGTCTTCCTTGGCTGCCCTACAGCTA
ATTCCGCTGATGGTAGGGGGAGGGAGGGAGGGAGGGAGGGGGGGAGGGAT
GGGTGCCGAGCTTTGTGCCTGTCGGATGGCGCTGGGCCGGGCGGAAAACG
TCTATGTCTCCTTCCCCCCTTCCTTCCTCCCTCCCTCAGCCGCCGCCTCC
TCCTCCTTCTTATTTCGGAGGCGGGAGGGCGGGCGGGAGGGCGGGGGGGA
GGGAGGAAGAGTGGTGTGTCTGACCATGCTCCCCCTGGTGACTCAGATAG
ATCGATTAGTGGGGCTCGGGCAGCACCGGCAAGCCCTGACGCTGGCTGCG
CTGGTGGAGGGGGAGGGCAGGGGGGAGGGCGGGGAGTGGTTGGCGGAGAT
TGATTTGCCGAGAGTGCGTGAGGGGTTCGCGGGTGTGTTGTGTGGGAAGG
GGCAATACGGCGAGGCGGTGAGGGAGTGGCTGCAGGCCGACACCCCCCCC
GCCATTGTCCTGGCCCACTTCTCCTCCCTCTTCCCTCCCGACCTCGCCCT
CCCTCCGTCCCTCAAGTCGCTGGTGGGAAAGAAGAAGAAGAGCCAGCCAT
CTGCCCGAGCGGGGGGGAGCGCGGACGCCATCCCGGCCGCCCACGTGCCC
AAGGCCTCGGTGGCCCTCCTCGCCTTTCTTCAGCACCACCGCCGTTCCTT
CAAAGAGATGGCGGACAAACACCACGCCGGCGGGGGGGAGCGGGAGGGCG
GGAAGGAGGGAGGGGTGGAGGAGGAGGTGAGGGGCATGGCCGTGTTTGTT
GACACGATGATAGTGCTGTCCGCGGCGAGGGGGGGAAAGAAGGAGGAGGC
CGTGGCGCTCTTGGCTGGAGGAGCCAACCGGGCGGATGTGGATGCGTGTG
CCCCCGTACTGGCAGCCCAAGGCGCGCCCTTCATCGAGGCCCTCCTATGG
CTCTACCGTTCGCACGACCTCCATGCCCAAGCCCTGTCACTCCTGCACGA
GGACCGGTGCGTGGCGAGGGAGGGAGGGAGGGAGGGAGGGAGGGGTTGGA
CGCTCTCCCAATTCCATGCCTGGACAGCAGACTACCTCTCCTCTCTCTGG
CACGCCGCCCCTCCCTCCCCCCCTTCCTCCCCCCCTCCCTCCTCCCTTGT
CCTGGCCCATCTCCGGCCTCTCCTCGAGGGGAATCCGAAGCTTGGGCTGG
GGGTGTTGGAGAGCAAGCCGAGGGTAGTGGAGGCGGATTGGAAGGCGGCG
ATGAGAAAGGGAGAGAGGGAGGGAGGAGGAGAGGGAGGGAGGGGAAGTTT
GTTCTACAAGAGTGCAGGGAGCACAGTGGCCTTGCCACTTGTAACGGGCG
CGACGCTGGCGATGGCGTACCTTGACTACTTGATTGACGCCGGGCAAGCC
CCTCCTGCGCTGCATGACGAATATTTCCTCCTCCTCCTCACGGCCCTTCT
CTCGGAGCAGGGCGAGGAGGAGGGAGGGGAGGAGGAAGGGGAGAAGAAGA
AGGAGCCCCTGACCCCTCTCGGGCTCCTCTACCAAGCCAAACTCCGTGAG
TTTCTCCGCTCCCCCTCCTCGCTCTACCACCCCCAACGCCTTCTTCCCGC
CCTCCAGCCCTTCCTCCCCCGGGCCTTCCTCGTCGAACATGCCCTCCTCC
TGGCCCGTTTGGGGCAGCACCGTGATGTTTTACGTACCTACGCTGTGGAG
TTGAACAATCCGTCGTTGGCGGAAGAATATTGCGAGGAAGTGTACAGGAG
GAAGGGAGGGAGGGAGGGAGGAAGCGGGGGAGGAAGGGGGGAGGTGTACT
TGGACTTAGTGCGGGTTTATTTGCAGCAGGAGGAGGAGGACAAGAAAGAG
GGAGGGAGGGAGGGCGGGAAGGAGGCGAACACGCCACGGTGGCTTGCGTG
TTTGGAGAGAAACTTCGACAAGATCGATGCAGTGGCAGCTCTCTCCCTCC
TCCCAGCCCGTACCACCACCCTTCGCTCCCTCTCTCCCTACCTCACCCGC
GTCCTCCGGCACTGTGCAACCGAGCGCCGACATAAGGAGATCGTGCATCA
GCTCCTCCGCGTTGAAGAGCTCAAGGTCAAACAAGAATTAATCCTCGAGC
AGTCTCGGCGTGTCACCATCACGGAAGACACCGCCTGCCGCGTCCCCACC
TGTCGACGGCCCATTGGCAACACGGCCATCCTCTGCTACCCCAATGGCGT
AGTTGTCCATCTGGCCTGTGGCCGCAACGATCTGCACCGCTGTCCGGTCA
CTGGAGAAGTCTTCACGACGCCAGGAGAGGAGCGGTAA

Synonyms

Publications