NO19G02280, NO19G02280 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO19G02280 vs. NCBI_GenBank
Match: XP_014147994.1 (hypothetical protein SARC_13351 [Sphaeroforma arctica JP610] >KNC74092.1 hypothetical protein SARC_13351 [Sphaeroforma arctica JP610]) HSP 1 Score: 157.1 bits (396), Expect = 2.000e-34 Identity = 78/183 (42.62%), Postives = 107/183 (58.47%), Query Frame = 0 Query: 483 QWVVFTAGPMGAGKSHTLKWLAKRGFFPLDDFVLADPDVIRNELPEIEGYIERNPLMAGQLTHKEAGYVLEILIREGLKEGRNVLVQGSLRDAAWHAQYFQELRECFPGLRIAIIHVTASRETVLSRARRRGIATRRVVPDEVLLASLEETPRAVGVLERQADYCVAIDNDGRGEPRLVGGCG 666 QW+VFTAG MGAGK+H LKWL GFFPL FV D IR LPE Y+ RN AG T+ E+GY+ E+L+ + +GRNV+V GSL+ WH Q LR + +++ IIH+ AS + V RA+ R T R +P + LL++ + P +V L D I ND +G+P ++ G Sbjct: 240 QWIVFTAGAMGAGKTHVLKWLWTEGFFPLHSFVQVSVDRIRTRLPEYHQYMNRNQESAGTNTNMESGYIAELLLGAAIMDGRNVIVDGSLKSWEWHKSTIQHLRRKYDKIQVGIIHIEASEKMVRQRAKEREQKTGRHIPYKTLLSAFDTVPDSVEKLRDSVDVVFTILNDEQGQPPVLTSGG 422
BLAST of NO19G02280 vs. NCBI_GenBank
Match: EJK48837.1 (hypothetical protein THAOC_32330 [Thalassiosira oceanica]) HSP 1 Score: 153.7 bits (387), Expect = 2.200e-33 Identity = 81/187 (43.32%), Postives = 106/187 (56.68%), Query Frame = 0 Query: 500 LKWLAKRGFFPLDDFVLADPDVIRNELPEIEGYIERNPLMAGQLTHKEAGYVLEILIREGLKEGRNVLVQGSLRDAAWHAQYFQELRECFPGLRIAIIHVTASRETVLSRARRRGIATRRVVPDEVLLASLEETPRAVGVLERQADYCVAIDNDGRGEPRLVGGCGREGGRGGRREEETWTTFSGVW 687 +K L RG FPL +V DPD IR+ PE Y ++ P AG+LT++EAGY+ EI+ + LKEG NVLV GSLR++ W+ QYF LR +P LRIAI+H+TA E +L RA RRG T RVVP E L SL + P +V +L DY + N ++ G TW +F W Sbjct: 1 MKELDSRGLFPLKSYVKVDPDEIRSYFPEYHSYAQKEPERAGELTNREAGYITEIIAKIALKEGYNVLVDGSLRNSTWYGQYFSHLRSEYPVLRIAILHITAPEEAILERAERRGKETGRVVPIETLQDSLTQVPESVKLLAPLTDYFCELHNAPNSRDVVLATAG-----------ITWDSFRDNW 176
BLAST of NO19G02280 vs. NCBI_GenBank
Match: XP_014156590.1 (hypothetical protein SARC_05027 [Sphaeroforma arctica JP610] >KNC82688.1 hypothetical protein SARC_05027 [Sphaeroforma arctica JP610]) HSP 1 Score: 149.8 bits (377), Expect = 3.100e-32 Identity = 101/357 (28.29%), Postives = 148/357 (41.46%), Query Frame = 0 Query: 341 YDYTKTTTEVYGVRQMEFFGPYAGTRQGLDYGFHRNYRRQRQEVQDGIIRRALEGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFSSLAHVQRAEPHEIGPDCRLSLPPSXXXXXXXXXXXXXXXXXXPQQWVVFTAGPMGAGKSHTLKWLAKRGFFPLDDFVLADPDVIRNELPEIEGYIERNPLMAGQLTHKEAGYVLEILIREGLKEGRNVLVQGSLRDAAWHAQYFQELRECFPGLRIAIIHVTASRETVLSRARRRGIATRRVVPDEVLLASLEETPRAVGVLERQADYCVAIDNDGRGEPRLVGGCGREGGRGGRREEETWTTFSGVWRGCGLPSRREG 698 +D+T T Y F + R+ LDY +H N RQE+QD I+ R +A+ + G + + + W+VF+ G MG GK +TL L K G F L FV+ DPD +++ELPE+ GY+ P A H+E+ + ++L L +G+ +LV GSLRD WH Q F ++R+ P RI IIHV+A RETV +RA++RG + R VP E + S + P++V L +D + N+ +V R G + TW F W P EG Sbjct: 37 FDWTVPTNVAYYDPHSGFADRFKEARKLLDYNYHHNLMVSRQELQDAILAR------------------------------------------------IANAAMDSCEDDGDEANAGVGSRPGLDFGAKTGTGSSKRSAQRPWIVFSGGAMGVGKGYTLSTLNKMGAFKLSRFVVIDPDKLKSELPEMAGYLREEPETAATKLHRESTQMSDVLFNYALAQGKCMLVDGSLRDVEWHRQLFADVRDNHPQYRIGIIHVSAKRETVHARAQKRGEVSGRFVPVETIDESYSQVPKSVHQLAPLSDLTYELSNEDHSPVGIVSCQVR--GEYVDVTDYTWDDFEASWERPDEPIEAEG 343
BLAST of NO19G02280 vs. NCBI_GenBank
Match: XP_014151942.1 (hypothetical protein SARC_09515 [Sphaeroforma arctica JP610] >KNC78040.1 hypothetical protein SARC_09515 [Sphaeroforma arctica JP610]) HSP 1 Score: 147.9 bits (372), Expect = 1.200e-31 Identity = 111/397 (27.96%), Postives = 165/397 (41.56%), Query Frame = 0 Query: 295 TPVPPAWSEDSSSSIGVRLEDSHGPDPTHGVKEVWGKDEDGKEDGGYDYTKTTTEVYGVRQM-EFFGPYAGTRQGLDYGFHRNYRRQRQEVQDGIIRRALEGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFSSLAHVQRAEPHEIGPDCRLSLPPSXXXXXXXXXXXXXXXXXXPQQWVVFTAGPMGAGKSHTLKWLAKRGFFPLDDFVLADPDVIRNELPEIEGYIERNPLMAGQLTHKEAGYVLEILIREGLKEGRNVLVQGSLRDAAWHAQYFQELRECFPGLRIAIIHVTASRETVLSRARRRGIATRRVVPDEVLLASLEETPRAVGVLERQADYCVAIDNDGRGE----PRLVGGCGREGGRGGRREEETWTTFSGVW 687 TP+ P W + SS +LE W G+E +D+T T E Y + F +A R+ LDY +HRN RQE+QD I+ R L ++ H ++ W+VFTAG MGAGK + L L FP+ FV+ DPD ++NELPE+ GY++ A H+E+ ++ ++L L +GR+++V GSLRD W++ F +R +P +I I+HV+A R + RAR+R + RVVP E + S+ + P++V L AD IDN + +LV G E + E W F+ VW Sbjct: 10 TPM-PQWLRNLSSDEAEKLES-------------WPPARHGQE---FDWTIPTNEQYHDPTINRFASKFAEARKRLDYEYHRNPVCPRQELQDAILTRVLAASNPLK-------------------------------------TTTKHTRK-------------------------------------PWLVFTAGAMGAGKGYVLSTLHNADAFPMSQFVMIDPDKLKNELPEMAGYLQEEAESAATKVHRESTFMSDVLFEYTLLQGRSLVVDGSLRDVDWYSDLFARIRREYPLYQIGILHVSAERSVIHQRARKRAELSNRVVPTETIDQSIAQVPKSVNTLAPLADVVYEIDNGEHSDLTIRRKLVWGEQVE------VDPEDWDEFATVW 309
BLAST of NO19G02280 vs. NCBI_GenBank
Match: KOO32504.1 (conserved unknown protein [Chrysochromulina sp. CCMP291]) HSP 1 Score: 141.0 bits (354), Expect = 1.500e-29 Identity = 74/172 (43.02%), Postives = 98/172 (56.98%), Query Frame = 0 Query: 482 QQWVVFTAGPMGAGKSHTLKWLAKRGFFPLDDFVLADPDVIRNELPEIEGYIERNPLMAGQLTHKEAGYVLEILIREGLKEGRNVLVQGSLRDAAWHAQYFQELRECFPGLRIAIIHVTASRETVLSRARRRGIATRRVVPDEVLLASLEETPRAVGVLERQADYCVAIDND 654 Q W +FTAG MGAGK+H + L + G PL+ FV D D IR+ LPE Y+ R+ AG +T E G + EI+ E L G NV + SLRD+ W + +R +P R+AI+HV AS E V R RRG T R +P+ VL + E+ PR+V L D + IDND Sbjct: 46 QPWCIFTAGAMGAGKTHVMCALDRHGLVPLNRFVRVDMDRIRDLLPETREYVRRDKTTAGAMTQLETGAIAEIVSEEALARGLNVWIDSSLRDSTWWSTELARIRRTYPH-RLAIVHVAASWEQVQRREERRGEQTGRRIPEAVLRSVFEQVPRSVDALAPLVDERIDIDND 216
BLAST of NO19G02280 vs. NCBI_GenBank
Match: XP_005838513.1 (hypothetical protein GUITHDRAFT_102796 [Guillardia theta CCMP2712] >EKX51533.1 hypothetical protein GUITHDRAFT_102796 [Guillardia theta CCMP2712]) HSP 1 Score: 139.8 bits (351), Expect = 3.200e-29 Identity = 89/324 (27.47%), Postives = 140/324 (43.21%), Query Frame = 0 Query: 341 YDYTKTTTEVYG--VRQMEFFGPYAGTRQGLDYGFHRNYRRQRQEVQDGIIRRALEGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFSSLAHVQRAEPHEIGPDCRLSLPPSXXXXXXXXXXXXXXXXXXPQQWVVFTAGPMGAGKSHTLKWLAKRGFFPLDDFVLADPDVIRNELPEIEGYIERNP--------LMAGQLTHKEAGYVLEILIREGLKEGRNVLVQGSLRDAAWHAQYFQELRECFPGLRIAIIHVTASRETVLSRARRRGIATRRVVPDEVLLASLEETPRAVGVLERQADYCVAIDNDG 655 +D+ +TT Y ++ F G Y R LDY +H NY +RQ +QD I++ + G H R W++FTAG MGAGKS T+ L G L V DPD ++ +LPE++ YI RNP ++AG TH E+G++ E+++R+ ++ ++++V GSL +A W+ +Y ++R +P RI IIHV RE + R ++R I T R + +V+ S+E +P+AV L D+ +DG Sbjct: 83 FDWNRTTNYNYAAPAKKENFHGVYKQVRSALDYNYHVNYIEERQRLQDEIVKYWCDSG--------------------------------------------VHSDR-------------------------------------PWIIFTAGAMGAGKSRTISQLEASGVDSLRLMVKVDPDTVKYQLPEMKHYISRNPGPNPNKNIILAGHATHNESGFLQEVIVRKLMEGSKHLIVDGSLSNAEWYREYLTQIRTKYPHYRIGIIHVMCDREIIWERVQQRCIRTGRCISRQVVDLSVEMSPKAVEQLTPLTDFVAIARSDG 325
BLAST of NO19G02280 vs. NCBI_GenBank
Match: XP_009040535.1 (hypothetical protein AURANDRAFT_66949 [Aureococcus anophagefferens] >EGB04799.1 hypothetical protein AURANDRAFT_66949 [Aureococcus anophagefferens]) HSP 1 Score: 138.7 bits (348), Expect = 7.200e-29 Identity = 71/196 (36.22%), Postives = 105/196 (53.57%), Query Frame = 0 Query: 484 WVVFTAGPMGAGKSHTLKWLAKRGFFPLDDFVLADPDVIRNELPEIEGYIERNPLMAGQLTHKEAGYVLEILIREGLKEGRNVLVQGSLRDAAWHAQYFQEL---------------------RECFPGLRIAIIHVTASRETVLSRARRRGIATRRVVPDEVLLASLEETPRAVGVLERQADYCVAIDNDGRGEP 659 WVVFT GPMGAGK H L WL++ GFFPL++ V DPD+ + +PE GY+ R+P AG H+E+G + E+ +++ ++V V GSLRD ++AQ +L RE +P R+AI +VT S T RA+ R T R +P+ + L SL ++ +L D+ + N+ G P Sbjct: 1374 WVVFTCGPMGAGKGHALSWLSEHGFFPLENIVHVDPDLFKQLMPEWPGYVARDPRSAGTRCHRESGLLAELTQDVAMQQSQHVWVDGSLRDGPYYAQVMADLRAPASRGNRARDAGPSIPRRRRERYPHYRLAIFYVTCSEATARRRAKARAERTGRAIPEALFLDSLAAPDASLRLLTPHVDFLARMSNEVDGAP 1569
BLAST of NO19G02280 vs. NCBI_GenBank
Match: OLP86870.1 (Pentatricopeptide repeat-containing protein, chloroplastic [Symbiodinium microadriaticum]) HSP 1 Score: 137.1 bits (344), Expect = 2.100e-28 Identity = 87/218 (39.91%), Postives = 119/218 (54.59%), Query Frame = 0 Query: 481 PQQWVVFTAGPMGAGKSHTLKWLAKRGFFPLDDFVLADPDVIRNELPEIEGYIERNPLMAGQLTHKEAGYVLEILIREGLKEGRNVLVQGSLRDAAWHAQYFQELRECFPGLRIAIIHVTASRETVLSR---ARRRGIATRRVVPDEVLLASLEETPRAVGVLERQADYCVAIDNDGRGEPRLVGGCGREGGRGGRREEETWTTFSGVWRGCGLPSRR 696 P W+VFTAG AGKS W+ ++G+ P DD V DPD+IR ELPE GY+ R+ A +T +EAG I E +++GR++LV GSLR+A+ +F E+RE +P RIAIIHV AS + + R AR G RV + L S + +V LE AD I+NDG P+L+ + R R+ E T F + G +PS R Sbjct: 1134 PYPWIVFTAGSFFAGKSWVASWMLEQGYLPFDDVVRTDPDLIRTELPEWSGYLARDGPEAAVMTQREAGTCALIAQWEAMRQGRHILVDGSLRNASRQLSFFAEIREAYPEYRIAIIHVFASWDAMQKRSTVAREGG----RVTSPKALRTSFDAVKSSVSELEALADLTTHINNDG-FPPQLLYMTFGQKCRKVRKWNEVRTAFLQI-PGLKVPSFR 1345
BLAST of NO19G02280 vs. NCBI_GenBank
Match: OLQ01711.1 (hypothetical protein AK812_SmicGene15515 [Symbiodinium microadriaticum]) HSP 1 Score: 131.7 bits (330), Expect = 8.800e-27 Identity = 62/173 (35.84%), Postives = 101/173 (58.38%), Query Frame = 0 Query: 485 VVFTAGPMGAGKSHTLKWLAKRGFFPLDDFVLADPDVIRNELPEIEGYIE-----RNPLMAGQLTHKEAGYVLEILIREGLKEGRNVLVQGSLRDAAWHAQYFQELRECFPGLRIAIIHVTASRETVLSRARRRGIATRRVVPDEVLLASLEETPRAVGVLERQADYCVAIDN 653 +VFT G MG GK + L W++++G FPL+D V DPD + +PE ++E +P + G H+E+ Y+ E+ + E ++ +++ V GSLR+A W + F ++R +P +IAI VTA E + R R T R +P+ +L+AS+ R+V +L AD+ +IDN Sbjct: 941 MVFTCGAMGVGKGYALAWMSQKGIFPLEDIVHIDPDHFKQVMPEWSAFLEYGRERGDPDIPGNRCHRESCYMQELALEESMRRSQHIWVDGSLRNAEWFVKVFSDIRLRYPAYQIAIFKVTAPEEVIRKRVAERAKQTGRSIPESMLVASIGAVERSVLMLTPHADFLASIDN 1113
BLAST of NO19G02280 vs. NCBI_GenBank
Match: XP_013760114.1 (hypothetical protein AMSG_03271 [Thecamonas trahens ATCC 50062] >KNC46841.1 hypothetical protein AMSG_03271 [Thecamonas trahens ATCC 50062]) HSP 1 Score: 130.6 bits (327), Expect = 2.000e-26 Identity = 66/173 (38.15%), Postives = 98/173 (56.65%), Query Frame = 0 Query: 482 QQWVVFTAGPMGAGKSHTLKWLAKRGFFPLDDFVLADPDVIRNELPEIEGYIERNPLMAGQLTHKEAGYVLEILIREGLKEGRNVLVQGSLRDAA-WHAQYFQELRECFPGLRIAIIHVTASRETVLSRARRRGIATRRVVPDEVLLASLEETPRAVGVLERQADYCVAIDND 654 + W +FTAG MG+GKS+ L+ L + G P FV DPD IR +LPE+ Y+ +P +AG TH EA Y+ E++ K ++++ GSLR A + Q F ++ FP RIAI+HVTA R ++ R R AT R +P ++L ++ + P +V L D A N+ Sbjct: 80 EPWAIFTAGTMGSGKSYVLRKLDELGVLPQRCFVFIDPDKIRYKLPEMAAYLGDDPTLAGSRTHLEASYIQEVMQSIAFKVQADIIIDGSLRHAGFFRDQLFPRIKAKFPTYRIAIVHVTAERHHIMERVESRAAATGRHIPIDLLEETMAQVPNSVETLTPHVDLVAAACNN 252 The following BLAST results are available for this feature:
BLAST of NO19G02280 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO19G02280 ID=NO19G02280|Name=NO19G02280|organism=Nannochloropsis oceanica|type=gene|length=2766bpback to top protein sequence of NO19G02280.1 >NO19G02280.1-protein ID=NO19G02280.1-protein|Name=NO19G02280.1|organism=Nannochloropsis oceanica|type=polypeptide|length=712bpback to top Synonyms
Publications
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