NO19G02280, NO19G02280 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO19G02280 vs. NCBI_GenBank
Match: XP_002181281.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC47204.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 195.3 bits (495), Expect = 6.500e-46 Identity = 117/330 (35.45%), Postives = 157/330 (47.58%), Query Frame = 0 Query: 358 FFGPYAGTRQGLDYGFHRNYRRQRQEVQDGIIRRALEGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFSSLAHVQRAEPHEIGPDCRLSLPPSXXXXXXXXXXXXXXXXXXPQQWVVFTAGPMGAGKSHTLKWLAKRGFFPLDDFVLADPDVIRNELPEIEGYIERNPLMAGQLTHKEAGYVLEILIREGLKEGRNVLVQGSLRDAAWHAQYFQELRECFPGLRIAIIHVTASRETVLSRARRRGIATRRVVPDEVLLASLEETPRAVGVLERQADYCVAIDNDGRGEP-RLVGGCGREGGRGGRREEETWTTFSGVW 687 F+G YA R+ LDY +H+NY +RQ QD I+ + G C P W+VFTAG MGAGKS+T++ L ++G FPL FV DPD IR LPE Y++++P +AG+LT KE+GY+ EIL L+EG+NVLV GSLRD +W+ YF+ LR FP LRIAI+H+TA R+ V RA R + T R+VP E+L+A+LE+ P++V +L AD V + N R E LV +TW TF W Sbjct: 244 FYGKYAHIRKTLDYNYHKNYTFERQRFQDAIVSEYVNNAILSDNN-------------------------------------------------GELCTTPTEP----------------------WIVFTAGAMGAGKSYTMRRLVEKGRFPLIAFVSVDPDDIRRHLPEFHLYVDQSPELAGELTRKESGYIAEILTLASLREGKNVLVDGSLRDWSWYKSYFERLRNEFPALRIAILHITAPRDAVFQRAADRAVTTGRIVPQELLVAALEQVPKSVEILSPLADCSVELKNAPRAEDIELV------------TPNQTWETFESNW 490
BLAST of NO19G02280 vs. NCBI_GenBank
Match: GAX10885.1 (hypothetical protein FisN_UnNu013 [Fistulifera solaris]) HSP 1 Score: 193.4 bits (490), Expect = 2.500e-45 Identity = 120/329 (36.47%), Postives = 163/329 (49.54%), Query Frame = 0 Query: 358 FFGPYAGTRQGLDYGFHRNYRRQRQEVQDGIIRRALEGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFSSLAHVQRAEPHEIGPDCRLSLPPSXXXXXXXXXXXXXXXXXXPQQWVVFTAGPMGAGKSHTLKWLAKRGFFPLDDFVLADPDVIRNELPEIEGYIERNPLMAGQLTHKEAGYVLEILIREGLKEGRNVLVQGSLRDAAWHAQYFQELRECFPGLRIAIIHVTASRETVLSRARRRGIATRRVVPDEVLLASLEETPRAVGVLERQADYCVAIDNDGRGEPRLVGGCGREGGRGGRREEETWTTFSGVW 687 F+G +A R LDY +HRNY +RQ +QD II L+ + H G C P WVVFTAG MG+GKS+T++ L RG FPL FV DPD +R LPE YI+++P AG LT KEAG + EIL L+EG+NVLV GSLRDA W+ +YF++LR +P +R+AIIHV+A RE VL+RA +R +T R+VP+E+LLA+++E P++V L +Y V ++N E R+V +ETW +F W Sbjct: 331 FYGRFAHIRATLDYSYHRNYTFERQMLQDAIISEFLDA-----------------------------------------------TYFTDKH--GDKCTTPTEP----------------------WVVFTAGAMGSGKSYTMRHLVNRGLFPLLAFVRVDPDELRRYLPEFHLYIQQSPEDAGTLTRKEAGLISEILTLAALQEGKNVLVDGSLRDAPWYEEYFEKLRGTYPHVRLAIIHVSAPREMVLARASKRAHSTGRIVPEELLLAAIDEVPKSVKKLAPLVNYHVELEN--ADEIRIVD-----------PPDETWDSFQATW 575
BLAST of NO19G02280 vs. NCBI_GenBank
Match: CBJ29745.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 192.6 bits (488), Expect = 4.200e-45 Identity = 92/171 (53.80%), Postives = 118/171 (69.01%), Query Frame = 0 Query: 484 WVVFTAGPMGAGKSHTLKWLAKRGFFPLDDFVLADPDVIRNELPEIEGYIERNPLMAGQLTHKEAGYVLEILIREGLKEGRNVLVQGSLRDAAWHAQYFQELRECFPGLRIAIIHVTASRETVLSRARRRGIATRRVVPDEVLLASLEETPRAVGVLERQADYCVAIDNDG 655 W VFTAG MGAGKSH + L +RG FP+D FV DPD +R +LPE+EGY+ +P AG LTHKEAG + E+L L +GRN+LV GS+R+ W+A++ +LR FP LR+AIIHV A E V+ RA RRG+ T RV+P VL ++ PR+V +L ADYCV IDN G Sbjct: 209 WAVFTAGAMGAGKSHVMGVLGERGLFPMDAFVQVDPDSLRRKLPEMEGYVRSDPGTAGSLTHKEAGLLAELLEETALLQGRNILVDGSMRNGEWYAEHVGDLRRRFPRLRVAIIHVWAPEEEVMKRAVRRGLTTGRVIPPSVLRDTIRAVPRSVEMLAPLADYCVRIDNVG 379
BLAST of NO19G02280 vs. NCBI_GenBank
Match: CBN77085.1 (Glutaredoxin [Ectocarpus siliculosus]) HSP 1 Score: 178.7 bits (452), Expect = 6.300e-41 Identity = 87/185 (47.03%), Postives = 120/185 (64.86%), Query Frame = 0 Query: 484 WVVFTAGPMGAGKSHTLKWLAKRGFFPLDDFVLADPDVIRNELPEIEGYIERNPLMAGQLTHKEAGYVLEILIREGLKEGRNVLVQGSLRDAAWHAQYFQELRECFPGLRIAIIHVTASRETVLSRARRRGIATRRVVPDEVLLASLEETPRAVGVLERQADYCVAIDNDGRGEPRLVGGCGREG 669 W+VFTAG MGAGKSHT+ W++++G+FPL D V DPD+ + PE Y+ P AG LT +E+GY++EI + + +N+ V GSLRD+ W+ Q F+++R+ P RIAI++V AS E VL RARRR T RVVP+ + SL PR V +L +AD+ I NDG +PRL G C +G Sbjct: 102 WIVFTAGAMGAGKSHTINWMSEKGYFPLPDIVTVDPDLFKASFPEWPEYLRHCPDTAGSLTRRESGYLVEIAQEVAMSQMKNIWVDGSLRDSKWYEQVFEDIRKTHPTYRIAILYVHASEEQVLERARRRAEETGRVVPEAEIKDSLYRVPRTVAMLMPRADFVAHIKNDG-DQPRLTGFCDWKG 285
BLAST of NO19G02280 vs. NCBI_GenBank
Match: XP_005826071.1 (hypothetical protein GUITHDRAFT_76626 [Guillardia theta CCMP2712] >EKX39091.1 hypothetical protein GUITHDRAFT_76626 [Guillardia theta CCMP2712]) HSP 1 Score: 176.8 bits (447), Expect = 2.400e-40 Identity = 85/177 (48.02%), Postives = 118/177 (66.67%), Query Frame = 0 Query: 484 WVVFTAGPMGAGKSHTLKWLAKRGFFPLDDFVLADPDVIRNELPEIEGYIERNPLMAGQLTHKEAGYVLEILIREGLKEGRNVLVQGSLRDAAWHAQYFQELRECFPGLRIAIIHVTASRETVLSRARRRGIATRRVVPDEVLLASLEETPRAVGVLERQADYCVAIDNDGRGEPRL 661 W+V+TAG MGAGKS T+ W++++G FPL D V DPD R LPE +GYIER+P MAG+LTHKE G +EI L++ +++ V GSLRDA W+ + F ++++ P RIAI++V AS +VL RA+ RG T RVVP++ +L SL P AV L + D+ I N+ EP+L Sbjct: 110 WIVYTAGAMGAGKSRTIHWMSEQGLFPLPDIVQIDPDSFRERLPEWQGYIERDPSMAGRLTHKECGLCVEIAQEAALRQRKHIWVDGSLRDAEWYTRVFNDIKKRHPEYRIAILYVYASMGSVLERAKLRGRLTGRVVPEKDILDSLRRVPLAVEQLASEVDFLAWISNESDQEPKL 286
BLAST of NO19G02280 vs. NCBI_GenBank
Match: KOO21526.1 (zeta toxin, partial [Chrysochromulina sp. CCMP291]) HSP 1 Score: 159.1 bits (401), Expect = 5.200e-35 Identity = 95/315 (30.16%), Postives = 141/315 (44.76%), Query Frame = 0 Query: 341 YDYTKTTTEVYGVRQMEFFGPYAGTRQGLDYGFHRNYRRQRQEVQDGIIRRALEGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFSSLAHVQRAEPHEIGPDCRLSLPPSXXXXXXXXXXXXXXXXXXPQQWVVFTAGPMGAGKSHTLKWLAKRGFFPLDDFVLADPDVIRNELPEIEGYIER--NPLMAGQLTHKEAGYVLEILIREGLKEGRNVLVQGSLRDAAWHAQYFQELRECFPGLRIAIIHVTASRETVLSRARRRGIATRRVVPDEVLLASLEETPRAVGVLERQADYCVAIDND 654 Y++ ++T + YGV EF+GPYAG R +DY +H NY ++RQE QD RA++ + V R P WVV+T GPMGAGK + + W++K G FPL+D V DPD + +PE Y+ER AG + H+E+ ++ EI ++ +NV V GSLRD +W + F++LR FP ++AI+ V AS V R RR T R+VP+ ++L SL + +L D+ ++ND Sbjct: 348 YNFHRSTNDNYGVLHREFYGPYAGIRARVDYSYHTNYTKERQEWQD----RAID----------------------------------------------SVVNRTAP-------------------------------VANPWVVYTCGPMGAGKGYVISWMSKNGIFPLEDIVHIDPDHFKELMPEWAAYMERPYTAPKAGDMCHRESAFLQEIAQEIAMRSSQNVWVDGSLRDGSWFTRVFRDLRRRFPRYKLAILEVGASESVVRYRVARRAELTGRMVPEHLILESLRSVASTLELLTPLVDFVARVNND 581
BLAST of NO19G02280 vs. NCBI_GenBank
Match: OLP88101.1 (hypothetical protein AK812_SmicGene30611 [Symbiodinium microadriaticum]) HSP 1 Score: 159.1 bits (401), Expect = 5.200e-35 Identity = 102/355 (28.73%), Postives = 160/355 (45.07%), Query Frame = 0 Query: 316 SHGPDPTHGVKEVWGKDEDGKEDG-----GYDYTKTTTEVYGVRQMEFFGPYAGTRQGLDYGFHRNYRRQRQEVQD----GIIRRALEGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFSSLAHVQRAEPHEIGPDCRLSLPPSXXXXXXXXXXXXXXXXXXPQQWVVFTAGPMGAGKSHTLKWLAKRGFFPLDDFVLADPDVIRNELPEIEGYIERNPLMAGQLTHKEAGYVLEILIREGLKEGRNVLVQGSLRDAAWHAQYFQELRECFPGLRIAIIHVTASRETVLSRARRRGIATRRVVPDEVLLASLEETPRAVGVLERQADYCVAIDNDGRGEPRLV 662 +HGP +H ++ + K G + G YD+ +T+E YG + F+GP+A R+ DY +H NY R+RQ QD G+I RA+ P W+V+T GPMG GK +TL W+++ GFFPL++ V DPD + +PE Y+ R+ AG L H E+ +++E+ +++ +N+ V GSLRDA ++ + F+ +RE P RI+I ++TAS +T+ R R R T R VP+ ++ ASL+ +++ L D+ I N+G EP LV Sbjct: 418 AHGP-ASHILQSLVKKLRLGCDSGFVPPVDYDFMSSTSENYGTNHLTFYGPFAKFRELCDYSYHVNYTRRRQAWQDEAIKGVISRAV-------------------------------------------------------------------------------------AQPAPWLVYTCGPMGVGKGYTLSWMSQNGFFPLENIVHIDPDAFKMMMPEWPDYVARDRDKAGTLCHLESSFMVEVSQAAAMEKQQNIWVDGSLRDADFYQKAFRRIRETHPNYRISIFYITASEQTIRQRIRHRAEQTGRDVPEHLIKASLQAMDKSLNTLTPLCDFVARISNEG-NEPTLV 685
BLAST of NO19G02280 vs. NCBI_GenBank
Match: XP_005760953.1 (hypothetical protein EMIHUDRAFT_105921 [Emiliania huxleyi CCMP1516] >EOD08524.1 hypothetical protein EMIHUDRAFT_105921 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 158.3 bits (399), Expect = 8.800e-35 Identity = 81/184 (44.02%), Postives = 107/184 (58.15%), Query Frame = 0 Query: 484 WVVFTAGPMGAGKSHTLKWLAKRGFFPLDDFVLADPDVIRNELPEIEGYIERNPLMAGQLTHKEAGYVLEILIREGLKEGRNVLVQGSLRDAAWHAQYFQELRECFPGLRIAIIHVTASRETVLSRARRRGIATRRVVPDEVLLASLEETPRAVGVLERQADYCVAIDNDGRGEPRLVGGCGRE 668 W++FTAG MG+GKS T ++L +RG PL + D D + LPE EGY+ R+PL AG T +E+GY+LEI L+E R+V V GSLRD W+ F LR P IAI+HV A+R+ VL R +RR T R VP+ + SL P AV +L + D+ +DN P LV C E Sbjct: 110 WIIFTAGAMGSGKSRTFEYLVERGIIPLQGVQMLDSDAFKTRLPEWEGYLARDPLSAGLHTRRESGYMLEIAQEAALRERRHVWVDGSLRDGEWYQSEFARLRREHPDYSIAIVHVVATRQAVLERVKRRAAVTGRHVPEAEIDDSLVRVPPAVRLLAPRVDFLAVVDNSAE-RPHLVEYCTGE 292
BLAST of NO19G02280 vs. NCBI_GenBank
Match: XP_005788129.1 (hypothetical protein EMIHUDRAFT_110774 [Emiliania huxleyi CCMP1516] >EOD35700.1 hypothetical protein EMIHUDRAFT_110774 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 158.3 bits (399), Expect = 8.800e-35 Identity = 81/184 (44.02%), Postives = 107/184 (58.15%), Query Frame = 0 Query: 484 WVVFTAGPMGAGKSHTLKWLAKRGFFPLDDFVLADPDVIRNELPEIEGYIERNPLMAGQLTHKEAGYVLEILIREGLKEGRNVLVQGSLRDAAWHAQYFQELRECFPGLRIAIIHVTASRETVLSRARRRGIATRRVVPDEVLLASLEETPRAVGVLERQADYCVAIDNDGRGEPRLVGGCGRE 668 W++FTAG MG+GKS T ++L +RG PL + D D + LPE EGY+ R+PL AG T +E+GY+LEI L+E R+V V GSLRD W+ F LR P IAI+HV A+R+ VL R +RR T R VP+ + SL P AV +L + D+ +DN P LV C E Sbjct: 110 WIIFTAGAMGSGKSRTFEYLVERGIIPLQGVQMLDSDAFKTRLPEWEGYLARDPLSAGLHTRRESGYMLEIAQEAALRERRHVWVDGSLRDGEWYQSEFARLRREHPDYSIAIVHVVATRQAVLERVKRRAAVTGRHVPEAEIDDSLVRVPPAVRLLAPRVDFLAVVDNSAE-RPHLVEYCTGE 292
BLAST of NO19G02280 vs. NCBI_GenBank
Match: OEU21432.1 (hypothetical protein FRACYDRAFT_235058 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 157.9 bits (398), Expect = 1.200e-34 Identity = 78/173 (45.09%), Postives = 106/173 (61.27%), Query Frame = 0 Query: 484 WVVFTAGPMGAGKSHTLKWLAKRGFFPLD-DFVLADPDVIRNELPEIEGYIERNPLMAGQLTHKEAGYVLEILIREGLKEGRNVLVQGSLRDAAWHAQYFQELRECFPGLRIAIIHVTASRETVLSRARRRGIATRRVVPDEVLLASLEETPRAVGVLERQADYCVAIDNDGR 656 W++FTAG GAGKSHT+K L + G FP FV DPD IR LPE YIE+ PL+AG+ T KE+G + E+L L NVLV GSL+D+ W+ +YF LR +P ++I II+VTA + + R + R + T R +P L S+EE P+AV L+ D+ I ND + Sbjct: 252 WIIFTAGVYGAGKSHTIKRLQRNGCFPSSKSFVTVDPDEIRRLLPEFSTYIEKVPLLAGEYTQKESGMIAELLTDIALSNNFNVLVDGSLKDSFWYEEYFTILRRLYPKIQIGIIYVTAPLDEIYDRVKNRSVITGRSIPMGTLQQSIEEVPKAVKKLQSSVDFFFEIHNDSQ 424 The following BLAST results are available for this feature:
BLAST of NO19G02280 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO19G02280 ID=NO19G02280|Name=NO19G02280|organism=Nannochloropsis oceanica|type=gene|length=2766bpback to top protein sequence of NO19G02280.1 >NO19G02280.1-protein ID=NO19G02280.1-protein|Name=NO19G02280.1|organism=Nannochloropsis oceanica|type=polypeptide|length=712bpback to top Synonyms
Publications
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