NO19G02230, NO19G02230 (gene) Nannochloropsis oceanica

Overview
NameNO19G02230
Unique NameNO19G02230
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1671
Alignment locationchr19:637041..638711 -

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr19genomechr19:637041..638711 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO19G02230 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL012nonsL012Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR034ncniR034Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR039ngnoR039Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK004562NSK004562Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO19G02230.1NO19G02230.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO19G02230.1NO19G02230.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO19G02230 ID=NO19G02230|Name=NO19G02230|organism=Nannochloropsis oceanica|type=gene|length=1671bp
GGGAGAGAGGGAGGGAGGGAGGGACAAGGTTGATGTTGGTGTGGTCTCTT
TGGCGACATCTTTGTGGAGAGGGAGGGATGGGGGGAGGGGGATGCAGGCA
GCAGCAGTAGCTGGAACAGCAGCAGCAGCAGCGGCAGTAGCAGCAGCCGC
AGCCGAGAGGATGGTGAGTGAGTTGGTGACTCTATCTTCTGGTAAATGGG
GCGGAGGGATGGAAGGAGGGAGAGGGAAAGGAGGAGGAGCAGCAGTTGCA
GCAGCAACTGCGATATCGCTGAGCAGAGAGGAGTGGGAGATGTTCAGTGG
CAGCAGTAGCAGCAGCAACAGCAGAGGAAGAGGAAGAGGAGGAGGAGAGG
AAAGTGAGGAAGCAGCGTCTGTAGCAGCAGTAGCAGCAGCAGTAACAGCA
GCAGTAGGAGCAGCAGCAGCAGCAGTGTGTGGCGCCATCGACAGGACTCG
CGCCATAATGGGCTCCAGTACTCTACAAGAGGCCGCGGACGGGTGGAGGG
AGGGAGGGAGGGAGGTGGAGGCGTATGTCAATTGTGTGTGGAGGGCCCAG
GGGGGCCAATGGAAGAAGATGAAAGAGTGGAGCAAGAAGGCGGAAGGGAT
GAACGAGGACTGGAGGAGGGACTACGCCAAAGCGAGAAATATCACCTTGA
CGGAAAGGGAGGAGTTTATGAGAGAAAACAACGGGACCGACCCCTGGTTG
CAGGGGAAGCAGAAGTTCGACCTTGAGTTGTGGCAAGTGCTTCGGACGCT
CACGGGCTACAACAATCCCCGCTTCTAGCCTTTCCTCCTGCCCCCCCTCT
TTCGTGTCCTACCTCCCTCCCACCTTCCGCATCAAAAGACAATAGATGGC
TCTAGTCTCTCCCGTGCTCCCTCCCTTATTAAGGTCGACTCAGCAGGGCA
CGGGGGGGGTAAACGAGGTCGACTCAGCTGGGCATGAGGGGAAATACTAG
TGAACAGAGATAAAGGGGTAGAATTCGAGAGGATTCAGACGCGAAGGGAC
GATTAAGGAGCTTAGGGTTTTGAGGTAAGACTTTCACAAAGAAAGAAAGC
AGCGGCAGTGTGCACGGAAACACAAAAGATATGTACAGGGAAGGAAGAAA
AGTTTAGATTATTAGATATAAGATTGACTTTGGCCTCAAGCGCGTGCATT
TAAGTTACTTGAAATTAGGAACAACGAACAATGAAAAATGAGAGAGCTTG
CCTCACGCCGATAGAGCTTGCCTCACGCCGAGAGAGCTTCGGGTACTCCA
TCCTTTGGGTGATCGTTTCGTTGCTGTTCTGTGCTTTGTGTCTGGGGTGT
TGAGGGAAATGGGAGTGCGCGTAATGGGAGAAAGGTAGGCAGACGATTGC
CTAGACCAGCTTCTAGGGAGATGTAGGAACGGCAAAAAGAACTAGACCAA
CTTCTCAATGGGCAAAAAAGGCCCAAAGGCCGCGATGCTGAGATTTCAAG
CTGTAGCGGCAATTTTCGGCTTTCCCTTTTCTTGTTCACTCCCAGAGGGC
GGCAATAGGATAATACGATCCATTCCAAAAAACTGTCCTATTACCTCCAA
AGTCTTTCCTCCTAACACCACCTTTATCACGCAATTTGTCATGCAATGCT
GCGATATTCGGTGCATCAAAATGCGCTTATGCCCCATCTATATCTCAGGT
AAGCGAACAATCGCCGATAGG
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protein sequence of NO19G02230.1

>NO19G02230.1-protein ID=NO19G02230.1-protein|Name=NO19G02230.1|organism=Nannochloropsis oceanica|type=polypeptide|length=229bp
MQAAAVAGTAAAAAAVAAAAAERMVSELVTLSSGKWGGGMEGGRGKGGGA
AVAAATAISLSREEWEMFSGSSSSSNSRGRGRGGGEESEEAASVAAVAAA
VTAAVGAAAAAVCGAIDRTRAIMGSSTLQEAADGWREGGREVEAYVNCVW
RAQGGQWKKMKEWSKKAEGMNEDWRRDYAKARNITLTEREEFMRENNGTD
PWLQGKQKFDLELWQVLRTLTGYNNPRF*
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Synonyms
Publications