NO19G02170, NO19G02170 (gene) Nannochloropsis oceanica

Overview
NameNO19G02170
Unique NameNO19G02170
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1164
Alignment locationchr19:620366..621529 +

Link to JBrowse

Properties
Property NameValue
DescriptionAcylphosphatase
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr19genomechr19:620366..621529 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003998acylphosphatase activity
GO:0016787hydrolase activity
GO:0003998acylphosphatase activity
Vocabulary: INTERPRO
TermDefinition
IPR036046Acylphosphatase-like_dom_sf
IPR001792Acylphosphatase-like_dom
IPR020456Acylphosphatase
Homology
[Close]
BLAST of NO19G02170 vs. NCBI_GenBank
Match: KRY11128.1 (Proto-oncogene tyrosine-protein kinase ROS [Trichinella patagoniensis])

HSP 1 Score: 115.2 bits (287), Expect = 1.300e-22
Identity = 51/96 (53.12%), Postives = 65/96 (67.71%), Query Frame = 0 
Query:   13 KPLWHMDWEVCGKVQGVWFRRYTVEKAQSLGLVGWCSNTVCGTVKGEAEGPPEMLEVFRYWLQNEGSPQSRVSNAIFKNERRIDITNYKDFGVRNG 109
            K L  +D+EV GKVQGV+FR+ TVEKA+ LGLVGWC NT  GTV G+ EGP   +   + WL+  GSP SR+  A+FKNE+ I   N+  F V+ G
Sbjct: 2597 KSLLSVDFEVFGKVQGVFFRKSTVEKAKDLGLVGWCQNTKTGTVIGQVEGPKNEVNEMKIWLEKVGSPSSRIDKAVFKNEKEISTLNFNSFDVKRG 2692
[Close]
BLAST of NO19G02170 vs. NCBI_GenBank
Match: KRZ92265.1 (Protein roller-3 [Trichinella sp. T8])

HSP 1 Score: 115.2 bits (287), Expect = 1.300e-22
Identity = 51/96 (53.12%), Postives = 65/96 (67.71%), Query Frame = 0 
Query:   13 KPLWHMDWEVCGKVQGVWFRRYTVEKAQSLGLVGWCSNTVCGTVKGEAEGPPEMLEVFRYWLQNEGSPQSRVSNAIFKNERRIDITNYKDFGVRNG 109
            K L  +D+EV GKVQGV+FR+ TVEKA+ LGLVGWC NT  GTV G+ EGP   +   + WL+  GSP SR+  A+FKNE+ I   N+  F V+ G
Sbjct: 2561 KSLLSVDFEVFGKVQGVFFRKSTVEKAKDLGLVGWCQNTKTGTVIGQVEGPKNEVNEMKIWLEKVGSPSSRIDKAVFKNEKEISTLNFNSFDVKRG 2656
[Close]
BLAST of NO19G02170 vs. NCBI_GenBank
Match: KRZ92266.1 (Acylphosphatase-2 [Trichinella sp. T8])

HSP 1 Score: 115.2 bits (287), Expect = 1.300e-22
Identity = 51/96 (53.12%), Postives = 65/96 (67.71%), Query Frame = 0 
Query:   13 KPLWHMDWEVCGKVQGVWFRRYTVEKAQSLGLVGWCSNTVCGTVKGEAEGPPEMLEVFRYWLQNEGSPQSRVSNAIFKNERRIDITNYKDFGVRNG 109
            K L  +D+EV GKVQGV+FR+ TVEKA+ LGLVGWC NT  GTV G+ EGP   +   + WL+  GSP SR+  A+FKNE+ I   N+  F V+ G
Sbjct:   95 KSLLSVDFEVFGKVQGVFFRKSTVEKAKDLGLVGWCQNTKTGTVIGQVEGPKNEVNEMKIWLEKVGSPSSRIDKAVFKNEKEISTLNFNSFDVKRG 190
[Close]
BLAST of NO19G02170 vs. NCBI_GenBank
Match: KRZ92267.1 (Protein roller-3 [Trichinella sp. T8])

HSP 1 Score: 115.2 bits (287), Expect = 1.300e-22
Identity = 51/96 (53.12%), Postives = 65/96 (67.71%), Query Frame = 0 
Query:   13 KPLWHMDWEVCGKVQGVWFRRYTVEKAQSLGLVGWCSNTVCGTVKGEAEGPPEMLEVFRYWLQNEGSPQSRVSNAIFKNERRIDITNYKDFGVRNG 109
            K L  +D+EV GKVQGV+FR+ TVEKA+ LGLVGWC NT  GTV G+ EGP   +   + WL+  GSP SR+  A+FKNE+ I   N+  F V+ G
Sbjct: 2571 KSLLSVDFEVFGKVQGVFFRKSTVEKAKDLGLVGWCQNTKTGTVIGQVEGPKNEVNEMKIWLEKVGSPSSRIDKAVFKNEKEISTLNFNSFDVKRG 2666
[Close]
BLAST of NO19G02170 vs. NCBI_GenBank
Match: KRY55963.1 (Acylphosphatase-2 [Trichinella britovi])

HSP 1 Score: 113.6 bits (283), Expect = 3.800e-22
Identity = 50/96 (52.08%), Postives = 64/96 (66.67%), Query Frame = 0 
Query:   13 KPLWHMDWEVCGKVQGVWFRRYTVEKAQSLGLVGWCSNTVCGTVKGEAEGPPEMLEVFRYWLQNEGSPQSRVSNAIFKNERRIDITNYKDFGVRNG 109
            K    +D+EV GKVQGV+FR+ TVEKA+ LGLVGWC NT  GTV G+ EGP   +   + WL+  GSP SR+  A+FKNE+ I   N+  F V+ G
Sbjct:   95 KSFLSVDFEVFGKVQGVFFRKSTVEKAKDLGLVGWCQNTKTGTVIGQVEGPKNEVNEMKIWLEKVGSPSSRIDKAVFKNEKEISTLNFNSFDVKRG 190
[Close]
BLAST of NO19G02170 vs. NCBI_GenBank
Match: KRY55964.1 (Protein roller-3 [Trichinella britovi])

HSP 1 Score: 113.6 bits (283), Expect = 3.800e-22
Identity = 50/96 (52.08%), Postives = 64/96 (66.67%), Query Frame = 0 
Query:   13 KPLWHMDWEVCGKVQGVWFRRYTVEKAQSLGLVGWCSNTVCGTVKGEAEGPPEMLEVFRYWLQNEGSPQSRVSNAIFKNERRIDITNYKDFGVRNG 109
            K    +D+EV GKVQGV+FR+ TVEKA+ LGLVGWC NT  GTV G+ EGP   +   + WL+  GSP SR+  A+FKNE+ I   N+  F V+ G
Sbjct: 2561 KSFLSVDFEVFGKVQGVFFRKSTVEKAKDLGLVGWCQNTKTGTVIGQVEGPKNEVNEMKIWLEKVGSPSSRIDKAVFKNEKEISTLNFNSFDVKRG 2656
[Close]
BLAST of NO19G02170 vs. NCBI_GenBank
Match: KRY55966.1 (Protein roller-3 [Trichinella britovi])

HSP 1 Score: 113.6 bits (283), Expect = 3.800e-22
Identity = 50/96 (52.08%), Postives = 64/96 (66.67%), Query Frame = 0 
Query:   13 KPLWHMDWEVCGKVQGVWFRRYTVEKAQSLGLVGWCSNTVCGTVKGEAEGPPEMLEVFRYWLQNEGSPQSRVSNAIFKNERRIDITNYKDFGVRNG 109
            K    +D+EV GKVQGV+FR+ TVEKA+ LGLVGWC NT  GTV G+ EGP   +   + WL+  GSP SR+  A+FKNE+ I   N+  F V+ G
Sbjct: 2571 KSFLSVDFEVFGKVQGVFFRKSTVEKAKDLGLVGWCQNTKTGTVIGQVEGPKNEVNEMKIWLEKVGSPSSRIDKAVFKNEKEISTLNFNSFDVKRG 2666
[Close]
BLAST of NO19G02170 vs. NCBI_GenBank
Match: KRX23540.1 (Protein roller-3 [Trichinella nelsoni])

HSP 1 Score: 112.8 bits (281), Expect = 6.500e-22
Identity = 50/94 (53.19%), Postives = 64/94 (68.09%), Query Frame = 0 
Query:   13 KPLWHMDWEVCGKVQGVWFRRYTVEKAQSLGLVGWCSNTVCGTVKGEAEGPPEMLEVFRYWLQNEGSPQSRVSNAIFKNERRIDITNYKDFGVR 107
            K L  +D+EV GKVQGV+FR+ TVEKA+ LGLVGWC NT  GTV G+ EGP   +   + WL+  GSP SR+  A+FKNE+ I   N+  F V+
Sbjct: 2544 KSLLSVDFEVFGKVQGVFFRKSTVEKAKDLGLVGWCQNTKTGTVIGQVEGPKNEVNEMKIWLEKVGSPSSRIDKAVFKNEKEISTLNFNSFDVK 2637
[Close]
BLAST of NO19G02170 vs. NCBI_GenBank
Match: KRX23541.1 (Proto-oncogene tyrosine-protein kinase ROS [Trichinella nelsoni])

HSP 1 Score: 112.8 bits (281), Expect = 6.500e-22
Identity = 50/94 (53.19%), Postives = 64/94 (68.09%), Query Frame = 0 
Query:   13 KPLWHMDWEVCGKVQGVWFRRYTVEKAQSLGLVGWCSNTVCGTVKGEAEGPPEMLEVFRYWLQNEGSPQSRVSNAIFKNERRIDITNYKDFGVR 107
            K L  +D+EV GKVQGV+FR+ TVEKA+ LGLVGWC NT  GTV G+ EGP   +   + WL+  GSP SR+  A+FKNE+ I   N+  F V+
Sbjct: 2574 KSLLSVDFEVFGKVQGVFFRKSTVEKAKDLGLVGWCQNTKTGTVIGQVEGPKNEVNEMKIWLEKVGSPSSRIDKAVFKNEKEISTLNFNSFDVK 2667
[Close]
BLAST of NO19G02170 vs. NCBI_GenBank
Match: KRX23542.1 (Proto-oncogene tyrosine-protein kinase ROS [Trichinella nelsoni])

HSP 1 Score: 112.8 bits (281), Expect = 6.500e-22
Identity = 50/94 (53.19%), Postives = 64/94 (68.09%), Query Frame = 0 
Query:   13 KPLWHMDWEVCGKVQGVWFRRYTVEKAQSLGLVGWCSNTVCGTVKGEAEGPPEMLEVFRYWLQNEGSPQSRVSNAIFKNERRIDITNYKDFGVR 107
            K L  +D+EV GKVQGV+FR+ TVEKA+ LGLVGWC NT  GTV G+ EGP   +   + WL+  GSP SR+  A+FKNE+ I   N+  F V+
Sbjct: 2584 KSLLSVDFEVFGKVQGVFFRKSTVEKAKDLGLVGWCQNTKTGTVIGQVEGPKNEVNEMKIWLEKVGSPSSRIDKAVFKNEKEISTLNFNSFDVK 2677
The following BLAST results are available for this feature:
BLAST of NO19G02170 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
KRY11128.11.300e-2253.13Proto-oncogene tyrosine-protein kinase ROS [Trichi... [more]
KRZ92265.11.300e-2253.13Protein roller-3 [Trichinella sp. T8][more]
KRZ92266.11.300e-2253.13Acylphosphatase-2 [Trichinella sp. T8][more]
KRZ92267.11.300e-2253.13Protein roller-3 [Trichinella sp. T8][more]
KRY55963.13.800e-2252.08Acylphosphatase-2 [Trichinella britovi][more]
KRY55964.13.800e-2252.08Protein roller-3 [Trichinella britovi][more]
KRY55966.13.800e-2252.08Protein roller-3 [Trichinella britovi][more]
KRX23540.16.500e-2253.19Protein roller-3 [Trichinella nelsoni][more]
KRX23541.16.500e-2253.19Proto-oncogene tyrosine-protein kinase ROS [Trichi... [more]
KRX23542.16.500e-2253.19Proto-oncogene tyrosine-protein kinase ROS [Trichi... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL012nonsL012Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR034ncniR034Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR039ngnoR039Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK004556NSK004556Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO19G02170.1NO19G02170.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|599373gene_7618Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100647g1gene6741Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO19G02170.1NO19G02170.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO19G02170 ID=NO19G02170|Name=NO19G02170|organism=Nannochloropsis oceanica|type=gene|length=1164bp
AGCAGTTGAGCAAAGCCATGGCGGCATCCCCACCATCACGGGAAGGCAGC
GACAAACCGCTTTGGCACATGGACTGGGAAGTTTGTGGCAAGgtgagtgc
gaaagctagaaggagggaagaaatagaagatgattatcaatcgccgatga
ggaggagcagcaattgttctaggaaagtgtgtaatcgcaccgcctcaaca
aatgtagggctctcattcatccttgctgaaacgagcaacaagatgagaga
ctggagacatccagcatcgctcatgccgactgcaacgacaagagagatta
tcaacagctgttgcctataccttgtgctcgctcctctcatcctcttatct
aaactcgtccttcaccaacacttccccctctcacgcacgcgcacatcagG
TCCAAGGGGTATGGTTCCGGAGATACACGGTCGAAAAGGCACAATCATTG
GGTTTGGTGGGTTGGTGCTCAAATACAGTTTGTGGAACTGTCAAAGGGGA
GGCAGAGGGGCCTCCCGAGATGCTGGAGGTCTTTCGgtgcgtttattgtt
ggggaatatagagggggggcacaaagagggagggagggaagacgcgtgga
acgtttggggagcgaaagactatctcaggtaaaagaaatgacgggagagg
gagaagtgatcgtgtccttgtccttggaattttgttctcttgattgtgcc
ctaccccgatcactgtcctcttctccagtctcacgctcaattttctcctg
tcacatcagGTATTGGCTACAAAACGAGGGATCGCCACAATCGCGGGTGA
GCAACGCAATTTTCAAGAACGAGCGTCGGATCGATATAACCAATTACAAA
GACTTTGGGGTGCGGAATGGCTGAACAGGGGATGAAGGAGGAGGGGGGGT
TGGTGGGGATAGTGGGGCAAAGTGTGATGGCAGGGATCGCCGGGGGAATA
CAGAGATAGAGATATGATGTGCAGAGTATGTGTATAGATAGACGAAGCGA
ATGAAATGAAAGGGGGAAAGTGACAAGACTGCTTTTACCCGGGTTTCTGT
CCTTGGACTTTTACTCGACTTCCCATCCCCCACAACTCCCACCTCAAAAT
GCGTGTCTCAAGGTTGAGACGGCAGAAATGGCTCTCTGATGAAGCAATTC
AAACTACTTTTACA
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protein sequence of NO19G02170.1

>NO19G02170.1-protein ID=NO19G02170.1-protein|Name=NO19G02170.1|organism=Nannochloropsis oceanica|type=polypeptide|length=109bp
MAASPPSREGSDKPLWHMDWEVCGKVQGVWFRRYTVEKAQSLGLVGWCSN
TVCGTVKGEAEGPPEMLEVFRYWLQNEGSPQSRVSNAIFKNERRIDITNY
KDFGVRNG*
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Synonyms
Publications