NO19G02140, NO19G02140 (gene) Nannochloropsis oceanica

Overview
NameNO19G02140
Unique NameNO19G02140
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1602
Alignment locationchr19:611028..612629 -

Link to JBrowse

Properties
Property NameValue
DescriptionTrna (Adenine-n-)-methyltransferase non-catalytic subunit trm6
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr19genomechr19:611028..612629 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0030488tRNA methylation
GO:0006139nucleobase-containing compound metabolic process
Vocabulary: Cellular Component
TermDefinition
GO:0031515tRNA (m1A) methyltransferase complex
GO:0005737cytoplasm
Vocabulary: INTERPRO
TermDefinition
IPR017423TRM6
Vocabulary: Molecular Function
TermDefinition
GO:0016740transferase activity
Homology
BLAST of NO19G02140 vs. NCBI_GenBank
Match: GAY04532.1 (Hypothetical protein PINS_012352 [Pythium insidiosum])

HSP 1 Score: 211.1 bits (536), Expect = 8.600e-51
Identity = 150/484 (30.99%), Postives = 242/484 (50.00%), Query Frame = 0
Query:   41 IEEGAWVILQMGDGRNFFACAQSKGMMRLGRVNISLSGLIGVPYGSVLEVHPDGLVPLPGTNELYEDLAVGDMDGNEFTRGGGPASVGEYDGATSDNRDFTDTNTAQRMTMVEIEELKNSGASGHAIIQALASNSDTWDKKTAFAKQKWTRKKAHKYVVRVRAVAGNGTNVVQALFVKSGLVKSTAIRPDSIAQLLSYGNVSAGSRVLLFDSYSGVVLGSVLERLGGYGNVVNLFAGAQAHMDHVKYFNLPKEHLARTLVHYPLTGLAEAERAXXXXXXXXXXXXXXXXDKRFLPTAEEEVKARASGKFVVYQKPVGVNERVEEGKIGKGEEEGDSFDRPKWLKYLEKKRSRLRALAEGRRLLLEGTDCLIVACRHDPAVVVPRLLPFMQEGAAFAVYCEFLEPLVALQDLLMDA-GMLRLQLLSTWWREYQVMPGRSHPHMNMSADGGCVLTGIKISDGD-----KICGGPSMEGVEAQEREA 519
            I EG  VI +  DGR FF   ++   +R+G+    L  +IG  YGS+ E     LV + G   L+ D    +               GE++   +DNR++TDTN+AQ++++ +I  ++ SGASG  IIQ L  NS+TWD KT F+KQK+ +KK  KY+ RVR +     ++ +    K+   K   IR DS+ Q+L Y N+ A ++VL+ D+  G+V G++ ER  G G ++  + G Q   D ++ FN  K  +  ++  +PL  +   E                   +  +P +E+ VK R S +  +         R+E  ++ +  E               +K  R  A    R  +   +D L++A  +DP  V+  LLP+++    F VYCE++EPL  L   L     ++ +QL  TW RE+Q++PGR+HP M M+A  G +LTG K+ + D     ++   P+M    A + +A
Sbjct:   69 IYEGDTVICETSDGRIFFQEVKANCTIRVGKKLTPLKPVIGAFYGSIFEEQNKKLVAVSG--GLFPDPVAPE--------------TGEFEVPDTDNRNYTDTNSAQKLSVHDITGMRESGASGREIIQKLVENSETWDAKTEFSKQKYLKKKQQKYMPRVRFLKCTADSLCRTYRAKNP-SKICNIREDSLGQILMYANIHAEAQVLVVDTCMGLVTGAIAERQAGLGRIIAGYEGQQLAADILRRFNFDKSTM-ESIHTFPLNSVQYLE-----------------MKEEDIPESEQVVKDRLSEEEKL---------RLEAERVAEYTEXXXXXXXXXXXXXXAEKMQRQPATTV-REWIRNQSDSLVIASHYDPEPVLLALLPYLKCSRPFVVYCEYMEPLTRLFGKLQQMDSVIDVQLSETWTREHQILPGRTHPEMKMNAFSGYLLTGTKVVNVDAPTLRQLESKPTMRKTAAPDNDA 507          
BLAST of NO19G02140 vs. NCBI_GenBank
Match: GAX99241.1 (Hypothetical protein PINS_007073 [Pythium insidiosum])

HSP 1 Score: 208.4 bits (529), Expect = 5.600e-50
Identity = 149/484 (30.79%), Postives = 241/484 (49.79%), Query Frame = 0
Query:   41 IEEGAWVILQMGDGRNFFACAQSKGMMRLGRVNISLSGLIGVPYGSVLEVHPDGLVPLPGTNELYEDLAVGDMDGNEFTRGGGPASVGEYDGATSDNRDFTDTNTAQRMTMVEIEELKNSGASGHAIIQALASNSDTWDKKTAFAKQKWTRKKAHKYVVRVRAVAGNGTNVVQALFVKSGLVKSTAIRPDSIAQLLSYGNVSAGSRVLLFDSYSGVVLGSVLERLGGYGNVVNLFAGAQAHMDHVKYFNLPKEHLARTLVHYPLTGLAEAERAXXXXXXXXXXXXXXXXDKRFLPTAEEEVKARASGKFVVYQKPVGVNERVEEGKIGKGEEEGDSFDRPKWLKYLEKKRSRLRALAEGRRLLLEGTDCLIVACRHDPAVVVPRLLPFMQEGAAFAVYCEFLEPLVALQDLLMDA-GMLRLQLLSTWWREYQVMPGRSHPHMNMSADGGCVLTGIKISDGD-----KICGGPSMEGVEAQEREA 519
            I EG  VI +  DGR FF   ++   +R+G+    L  +IG  YGS+ E     LV + G   L+ D    +               GE++   +DNR++TDTN+AQ++++ +I  ++ SGASG  IIQ L  NS+TWD KT F+KQK+ +KK  KY+ RVR +     ++ +    K+   K   IR DS+ Q+L Y N+ A ++VL+ D+  G+V G++ ER  G G ++  + G Q   D ++ FN  K  +  ++  +PL  +   E                   +  +P +E+ VK R S +  +         R+E  ++ +  E               +K  R  A    R  +   +D L++A  +DP  V+  LLP+++    F VY E++EPL  L   L     ++ +QL  TW RE+Q++PGR+HP M M+A  G +LTG K+ + D     ++   P+M    A + +A
Sbjct:   35 IYEGDTVICETSDGRIFFQEVKANCTIRVGKKLTPLKPVIGAXYGSIFEEQNKKLVAVSG--GLFPDPVAPE--------------TGEFEVPDTDNRNYTDTNSAQKLSVHDITGMRESGASGREIIQKLVENSETWDAKTEFSKQKYLKKKQQKYMPRVRFLKCTADSLCRTYRAKNP-SKICNIREDSLGQILMYANIHAEAQVLVVDTCMGLVTGAIAERQAGLGRIIAGYEGQQLAADILRRFNFDKSTM-ESIHTFPLNSVQYLE-----------------MKEEDIPESEQVVKDRLSEEEKL---------RLEAERVAEYTEXXXXXXXXXXXXXXAEKMQRQPATTV-REWIRNQSDSLVIASHYDPEPVLLALLPYLKCSRPFVVYXEYMEPLTRLFGKLQQMDSVIDVQLSETWTREHQILPGRTHPEMKMNAFSGYLLTGTKVVNVDAPTLRQLESKPTMRKTAAPDNDA 473          
BLAST of NO19G02140 vs. NCBI_GenBank
Match: ETI30962.1 (hypothetical protein F443_21994 [Phytophthora parasitica P1569])

HSP 1 Score: 205.7 bits (522), Expect = 3.600e-49
Identity = 164/499 (32.87%), Postives = 227/499 (45.49%), Query Frame = 0
Query:    5 SGTEASATACCTRTSPPLPPITTSPPLASQPAALPVIEEGAWVILQMGDGRNFFACAQSKGMMRLGRVNISLSGLIGVPYGSVLEVHPDGLVPLPGTNELYEDLAVGDMDGNEFTRGGGPASVGEYDGATSDNRDFTDTNTAQRMTMVEIEELKNSGASGHAIIQALASNSDTWDKKTAFAKQKWTRKKAHKYVVRVRAVAGNGTNVVQALFVKSGLVKSTAIRPDSIAQLLSYGNVSAGSRVLLFDSYSGVVLGSVLERLGGYGNVVNLFAGAQAHMDHVKYFNLPKEHLARTLVHYPLTGLAEAERAXXXXXXXXXXXXXXXXDKRFLPTAEEEV----KARASGKFVVYQKPVGVNERVEEGKIGKGEEEGDSFDRPKWLKYLEKKRSRLRALAEGRRLLLEGTDCLIVACRHDPAVVVPRLLPFMQEGAAFAVYCEFLEPLV-ALQDLLMDAGMLRLQLLSTWWREYQVMPGRSHPHMNMSADGGCVLTGIKISD 499
            S   A+    CT T  P  P               VI EG  VI Q  DGR FF        +R+G+   +L  +IG  YG++ E     LV +  T  L+ D  V    G+ F   G             DNR + DTN+AQ +   +I EL+  GASG  IIQ L  NS TW+ KT F+KQK+ +KK  KY+ RVR +     ++ +   +K+   K   +R DS+ Q+L YGN+ AG +VL+ D+  G+V G++ ER GG G ++  + G Q   D ++ FN  K  L    +HY                             R L   EE+V    K    G     ++ +   ER                   +  K   +K S +R  A       E +D L++A  +DP  V+  LLP++     F VY EFLEPL      L     ++ LQL  TW RE QV+PGR+HP MNMSA  G +L+GIKI D
Sbjct:    4 SSIAAADGGACTSTEAPRLPY--------------VIYEGDTVICQTSDGRMFFQAVAKDESIRVGKKVANLKPVIGSFYGAIFEEQNKKLVKV--TGGLFPD-PVAPETGDGFVPDG-------------DNRHYADTNSAQTLKQTDIGELREKGASGKEIIQKLVENSSTWETKTEFSKQKYLKKKQQKYMPRVRFLRCTAESLCRTYRLKNP-AKICNLREDSLGQILVYGNIFAGGQVLVVDTCMGLVTGAIAERQGGSGRIICPYEGQQPAADILRRFNFDKRTLES--IHY-----------------------MPFKQVRLLEMEEEDVVEPAKVARDGLTPEEREQLAA-ERAXXXXXXXXXXXXXXXXXREHTKLFRQKPSTIREWAR------EKSDSLVIAANYDPEEVLMALLPYLGRSKPFVVYSEFLEPLTRTFATLQKMEAIIDLQLNETWTRENQVLPGRTHPEMNMSACSGYLLSGIKILD 439          
BLAST of NO19G02140 vs. NCBI_GenBank
Match: ETK71349.1 (hypothetical protein L915_21397 [Phytophthora parasitica] >ETL24791.1 hypothetical protein L916_21266 [Phytophthora parasitica] >ETL78013.1 hypothetical protein L917_21114 [Phytophthora parasitica] >ETM31278.1 hypothetical protein L914_21128 [Phytophthora parasitica] >ETP00765.1 hypothetical protein F441_21883 [Phytophthora parasitica CJ01A1] >ETP28916.1 hypothetical protein F442_21857 [Phytophthora parasitica P10297])

HSP 1 Score: 201.4 bits (511), Expect = 6.800e-48
Identity = 164/502 (32.67%), Postives = 226/502 (45.02%), Query Frame = 0
Query:    5 SGTEASATACCTRTSPPLPPITTSPPLASQPAALPVIEEGAWVILQMGDGRNFFACAQSKGMMRLGRVNISLSGLIGVPYGSVLEVHPDGLVPLPGTNELYEDLAVGDMDGNEFTRGGGPASVGEYDGATSDNRDFTDTNTAQRMTMVEIEELKNSGASGHAIIQALASNSDTWDKKTAFAKQKWTRKKAHKYVVRVRAVAGNGTNVVQALFVKSGLVKSTAIRPDSIAQLLSYGNVSAGSRVLLFDSYSGVVLGSVLERLGGYGNVVNLFAGAQAHMDHVKYFNLPKEHLARTLVHYPLTGLAEAERAXXXXXXXXXXXXXXXXDKRFLPTAEEEVKARASGKFVVYQKPVGVNERVE-------EGKIGKGEEEGDSFDRPKWLKYLEKKRSRLRALAEGRRLLLEGTDCLIVACRHDPAVVVPRLLPFMQEGAAFAVYCEFLEPLV-ALQDLLMDAGMLRLQLLSTWWREYQVMPGRSHPHMNMSADGGCVLTGIKISD 499
            S   A+    CT T  P  P               VI EG  VI Q  DGR FF        +R+G+   +L  +IG  YG++ E     LV +  T  L+ D  V    G+ F   G             DNR + DTN+AQ +   +I EL+  GASG  IIQ L  NS TW+ KT F+KQK+ +KK  KY+ RVR +     ++ +   +K+   K   +R DS+ Q+L YGN+ AG +VL+ D+  G+V G++ ER GG G ++  + G Q   D ++ FN  K  L    +HY                             R L   EE+V   A     V +  +   ER +                           K   +K S +R  A       E +D L++A  +DP  V+  LLP++     F VY EFLEPL      L     ++ LQL  TW RE QV+PGR+HP MNMSA  G +L+GIKI D
Sbjct:    4 SSIAAADGGACTSTEAPRLPY--------------VIYEGDTVICQTSDGRMFFQAVAKDESIRVGKKVANLKPVIGSFYGAIFEEQNKKLVKV--TGGLFPD-PVAPETGDGFVPDG-------------DNRHYADTNSAQTLKQTDIGELREKGASGKEIIQKLVENSSTWETKTEFSKQKYLKKKQQKYMPRVRFLRCTAESLCRTYRLKNP-AKICNLREDSLGQILVYGNIFAGGQVLVVDTCMGLVTGAIAERQGGSGRIICPYEGQQPAADILRRFNFDKRTLES--IHY-----------------------MPFKQVRLLEMEEEDVVEPAK----VARDGLTPEEREQLAAXXXXXXXXXXXXXXXXXXXXXXQTKLFRQKPSTIREWAR------EKSDSLVIAANYDPEEVLMALLPYLGRSKPFVVYSEFLEPLTRTFATLQKMEAIIDLQLNETWTRENQVLPGRTHPEMNMSACSGYLLSGIKILD 439          
BLAST of NO19G02140 vs. NCBI_GenBank
Match: XP_008915171.1 (hypothetical protein PPTG_18823 [Phytophthora parasitica INRA-310] >ETM99552.1 hypothetical protein PPTG_18823 [Phytophthora parasitica INRA-310])

HSP 1 Score: 201.4 bits (511), Expect = 6.800e-48
Identity = 165/502 (32.87%), Postives = 226/502 (45.02%), Query Frame = 0
Query:    5 SGTEASATACCTRTSPPLPPITTSPPLASQPAALPVIEEGAWVILQMGDGRNFFACAQSKGMMRLGRVNISLSGLIGVPYGSVLEVHPDGLVPLPGTNELYEDLAVGDMDGNEFTRGGGPASVGEYDGATSDNRDFTDTNTAQRMTMVEIEELKNSGASGHAIIQALASNSDTWDKKTAFAKQKWTRKKAHKYVVRVRAVAGNGTNVVQALFVKSGLVKSTAIRPDSIAQLLSYGNVSAGSRVLLFDSYSGVVLGSVLERLGGYGNVVNLFAGAQAHMDHVKYFNLPKEHLARTLVHYPLTGLAEAERAXXXXXXXXXXXXXXXXDKRFLPTAEEEVKARASGKFVVYQKPVGVNERVE-------EGKIGKGEEEGDSFDRPKWLKYLEKKRSRLRALAEGRRLLLEGTDCLIVACRHDPAVVVPRLLPFMQEGAAFAVYCEFLEPLV-ALQDLLMDAGMLRLQLLSTWWREYQVMPGRSHPHMNMSADGGCVLTGIKISD 499
            S   A+    CT T  P  P               VI EG  VI Q  DGR FF        +R+G+   +L  +IG  YG+V E     LV +  T  L+ D  V    G+ F   G             DNR + DTN+AQ +   +I EL+  GASG  IIQ L  NS TW+ KT F+KQK+ +KK  KY+ RVR +     ++ +   +K+   K   +R DS+ Q+L YGN+ AG +VL+ D+  G+V G++ ER GG G ++  + G Q   D ++ FN  K  L    +HY                             R L   EE+V   A     V +  +   ER +                           K   +K S +R  A       E +D L++A  +DP  V+  LLP++     F VY EFLEPL      L     ++ LQL  TW RE QV+PGR+HP MNMSA  G +L+GIKI D
Sbjct:    4 SSIAAADGGACTSTEAPRLPY--------------VIYEGDTVICQTSDGRMFFQAVAKDESIRVGKKVANLKPVIGSFYGAVFEEQNKKLVKV--TGGLFPD-PVAPETGDGFVPDG-------------DNRHYADTNSAQTLKQTDIGELREKGASGKEIIQKLVENSSTWETKTEFSKQKYLKKKQQKYMPRVRFLRCTAESLCRTYRLKNP-AKICNLREDSLGQILVYGNIFAGGQVLVVDTCMGLVTGAIAERQGGSGRIICPYEGQQPAADILRRFNFDKRTLES--IHY-----------------------MPFKQVRLLEMEEEDVVEPAK----VARDGLTPEEREQLAAXXXXXXXXXXXXXXXXXXXXXXQTKLFRQKPSTIREWAR------EKSDSLVIAASYDPEEVLMALLPYLGRSKPFVVYSEFLEPLTRTFATLQKMEAIIDLQLNETWTRENQVLPGRTHPEMNMSACSGYLLSGIKILD 439          
BLAST of NO19G02140 vs. NCBI_GenBank
Match: ETO59693.1 (hypothetical protein F444_22014 [Phytophthora parasitica P1976])

HSP 1 Score: 201.1 bits (510), Expect = 8.900e-48
Identity = 164/502 (32.67%), Postives = 226/502 (45.02%), Query Frame = 0
Query:    5 SGTEASATACCTRTSPPLPPITTSPPLASQPAALPVIEEGAWVILQMGDGRNFFACAQSKGMMRLGRVNISLSGLIGVPYGSVLEVHPDGLVPLPGTNELYEDLAVGDMDGNEFTRGGGPASVGEYDGATSDNRDFTDTNTAQRMTMVEIEELKNSGASGHAIIQALASNSDTWDKKTAFAKQKWTRKKAHKYVVRVRAVAGNGTNVVQALFVKSGLVKSTAIRPDSIAQLLSYGNVSAGSRVLLFDSYSGVVLGSVLERLGGYGNVVNLFAGAQAHMDHVKYFNLPKEHLARTLVHYPLTGLAEAERAXXXXXXXXXXXXXXXXDKRFLPTAEEEVKARASGKFVVYQKPVGVNERVE-------EGKIGKGEEEGDSFDRPKWLKYLEKKRSRLRALAEGRRLLLEGTDCLIVACRHDPAVVVPRLLPFMQEGAAFAVYCEFLEPLV-ALQDLLMDAGMLRLQLLSTWWREYQVMPGRSHPHMNMSADGGCVLTGIKISD 499
            S   A+    CT T  P  P               VI EG  VI Q  DGR FF        +R+G+   +L  +IG  YG++ E     LV +  T  L+ D  V    G+ F   G             DNR + DTN+AQ +   +I EL+  GASG  IIQ L  NS TW+ KT F+KQK+ +KK  KY+ RVR +     ++ +   +K+   K   +R DS+ Q+L YGN+ AG +VL+ D+  G+V G++ ER GG G ++  + G Q   D ++ FN  K  L    +HY                             R L   EE+V   A     V +  +   ER +                           K   +K S +R  A       E +D L++A  +DP  V+  LLP++     F VY EFLEPL      L     ++ LQL  TW RE QV+PGR+HP MNMSA  G +L+GIKI D
Sbjct:    4 SSIAAADGGACTSTEAPRLPY--------------VIYEGDTVICQTSDGRMFFQAVAKDESIRVGKKVANLKPVIGSFYGAIFEEQNKKLVKV--TGGLFPD-PVAPETGDGFVPDG-------------DNRHYADTNSAQTLKQTDIGELREKGASGKEIIQKLVENSSTWETKTEFSKQKYLKKKQQKYMPRVRFLRCTAESLCRTYRLKNP-AKICNLREDSLGQILVYGNIFAGGQVLVVDTCMGLVTGAIAERQGGSGRIICPYEGQQPAADILRRFNFDKRTLES--IHY-----------------------MPFKQVRLLEMEEEDVVEPAK----VARDGLTPEEREQLAAXXXXXXXXXXXXXXXXXXXXXXQTKLFRQKPSTIREWAR------EKSDSLVIAASYDPEEVLMALLPYLGRSKPFVVYSEFLEPLTRTFATLQKMEAIIDLQLNETWTRENQVLPGRTHPEMNMSACSGYLLSGIKILD 439          
BLAST of NO19G02140 vs. NCBI_GenBank
Match: GAX24305.1 (tRNA (adenine-N(1)-)-methyltransferase non-catalytic subunit [Fistulifera solaris])

HSP 1 Score: 200.7 bits (509), Expect = 1.200e-47
Identity = 165/524 (31.49%), Postives = 257/524 (49.05%), Query Frame = 0
Query:   30 PLASQPAALPVIEEGAWVILQMGDGRNFF--ACAQSKGM---MRLGRVNISLSGLIGVPYGSVLEVHPDGLVPLPGTNELY--EDLAVGDMD---GNEFTRGGGPASVGEYDGATSDNRDFTDTNTAQRMTMVEIEELKNSGASGHAIIQALASNSDTWDKKTAFAKQKWTRKKAHKYVVRVRAVAGNGTNVVQALFVKSGLVKSTAIRPDSIAQLLSYGNVSAGSRVLLFDSYSGVVLGSVLERLGGYGNVVNLFAGAQAHMDHV-KYFNLP-KEHLARTLVH----YPLTGLAEAERAXXXXXXXXXXXXXXXXDKRFLPTAEEEVKARASGKFVVYQKPVGVNERVEEGKIGKGEEEGDSFDRPKWLKYLEKKRSRL------RALAEGRRLLL-EGTDCLIVACRHDPAVVVPRLLPFMQEGAAFAVYCEFLEPL-VALQDLLMDAGMLRLQLLSTWWREYQVMPGRSHPHMNMSADGGCVLTGIKISDGDKICGGPSM-EGVEAQEREAVGGNGNSRKR 529
            PL + P     ++ G   +L   DGR  F     + KGM   +++ + +     LIG+PYG+VLEV  + L+PLP   +L     LA   +D    NE   G   A          DNR   DTNT+Q +   E+ EL+NS   G  I++ +  NS T+ +KT +++ K+  +K  KY  R R V   G  + +A+F+K    +   +R D++ Q+LSYGNVSAG +VL++++  G++ G++ +R+GGYG +++++ G Q   + +   FNL   E  + + VH    Y  TG  +                            E+EV      + V+ Q P  +          K  E   S  R K   +L K+ +R       R   E R L+L   +DC++VA R+D    +  LLP +     F VYCEF+EPL +   +L  +   + L+L  TW REYQ++PGR+HP+M M   GG +LTGIK+   D + G   + E +  + R+ +GG    R R
Sbjct:   25 PLLTLP--FNTLQVGEHFLLHFSDGRQVFGQCLTKVKGMTPTVKINKRSYPTYNLIGLPYGTVLEVERNFLLPLPADEDLIPSHPLAATKVDEEISNESDTGTAAA-------RERDNRHIVDTNTSQALDQKELVELRNSCTEGAKIVEKIIENSSTFAQKTDYSRAKYVVRKQQKYQPRCRLVRCTGPTICEAMFLKDA-KRIMNLRDDTLGQILSYGNVSAGCQVLIWETCYGIITGTLAQRMGGYGQILSVYTGQQHSFNEILSKFNLSFPESSSISWVHSGDIYSNTGEND---------------------------DEDEVDVEKKEREVI-QWPCPLQNHTR-----KYIETFPS--RAKQEHFLMKRAARFARKLTRRTPLEARNLVLSRKSDCVVVAVRYDATETLLALLPHLAPSCPFVVYCEFIEPLTLCFLELQRNNLAVNLRLSDTWAREYQILPGRTHPNMTMRQSGGFLLTGIKL---DPVFGINELDEDLLKEIRQQMGGRRGKRPR 500          
BLAST of NO19G02140 vs. NCBI_GenBank
Match: CBN75132.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 199.5 bits (506), Expect = 2.600e-47
Identity = 162/533 (30.39%), Postives = 248/533 (46.53%), Query Frame = 0
Query:   10 SATACCTRTSPPLPPITTSPPLASQPAALPVIEEGAWVILQMGDGRNFFACAQSKGMMRLGRVNISLSGLIGVPYGSVLEVHPDGLVPLPGTNELYEDLAVGDMDGNEFTRGGGPASVGEYDGATSDNRDFTDTNTAQRMTMVEIEELKNSGASGHAIIQALASNSDTWDKKTAFAKQKWTRKKAHKYVVRVRAVAGNGTNVVQALFVKSGLVKSTAIRPDSIAQLLSYGNVSAGSRVLLFDSYSGVVLGSVLERLGGYGNVVNLFAGAQAHMDHVKYFNLPKEHLARTLVHYPLTGLAEAERAXXXXXXXXXXXXXXXXDKRFLPTAEEEVKARASGKFVVYQKPVGVNERVEEGKIGKGEEEGDSF-----DRPKWLKYLEKKRSRLR------ALAEGRRLLLEGTDCLIVACRHDPAVVVPRLLPFMQEGAAFAVYCEFLEPLVALQDLLMDAGMLRLQLLSTWWREYQVMPGRSHPHMNMSADGGCVLTGIKISDGDKICGGPSMEGVEAQEREAVGGNGNSRKRYRK 532
            SAT C T T      +     +  Q      + +G  +++   DGR FF   +S   + +G+ +  +S L+  PYG+V E+  + LV + G     E+   G ++  E T     A+    D    DNR FTDTNTAQ++T  +I ++KN G  G AIIQAL  NSDTW  KT +++ KW ++K  KY  RVR V   G  +  A F K+   K + +R D++A +L++ NV AG + L+ D+  GVV  ++LER+G  G +  L+A +Q  MD V+ F+  +++L + L+    + L                          +P +E E      G           + R EE  + +     D       DRP     +E+K +R+R      A  + R  L +G DCL++AC+ DP   V  +LP +     FA+Y EF+E                            V+PGR+HP  NMS+ GG VLTGIKI++           GV  + R       + +KRY++
Sbjct:    4 SATHCDTATRWHCRHVAKMERIEGQ------VNDGDTILVDHSDGRTFFVKVESGKRVNIGKTSCKMSYLLNAPYGAVFELDGNRLVRVDGELVEAEEEPPGVVE--EVT-----AAALASDVRPQDNRGFTDTNTAQKLTEEDIHKMKNEGKGGRAIIQALMDNSDTWGNKTQYSQAKWLKRKQQKYRPRVRVVRVTGRTMCDAYFAKN-REKVSNLRSDALALVLTHANVFAGCQALVLDTCMGVVTAAMLERMGCQGRIFALYAQSQPSMDAVRKFDHAEKNLLKCLLPLHTSELGRLS----------------------IPESEREADPVDDGG--------PGDSRTEEEALAEYRTVMDDHGVPEKDRP---ARIERKLARMRRNKHRPAPRQVRDWLRQGCDCLVIACKFDPIAAVDAMLPHLTPSRPFAIYSEFIE----------------------------VLPGRTHPLNNMSSCGGYVLTGIKITN------NRDPRGVIPKARIPDMAKRHKKKRYKR 455          
BLAST of NO19G02140 vs. NCBI_GenBank
Match: KUF81117.1 (tRNA (adenine(58)-N(1))-methyltransferase non-catalytic subunit trm6 [Phytophthora nicotianae])

HSP 1 Score: 199.1 bits (505), Expect = 3.400e-47
Identity = 163/501 (32.53%), Postives = 225/501 (44.91%), Query Frame = 0
Query:    5 SGTEASATACCTRTSPPLPPITTSPPLASQPAALPVIEEGAWVILQMGDGRNFFACAQSKGMMRLGRVNISLSGLIGVPYGSVLEVHPDGLVPLPGTNELYEDLAVGDMDGNEFTRGGGPASVGEYDGATSDNRDFTDTNTAQRMTMVEIEELKNSGASGHAIIQALASNSDTWDKKTAFAKQKWTRKKAHKYVVRVRAVAGNGTNVVQALFVKSGLVKSTAIRPDSIAQLLSYGNVSAGSRVLLFDSYSGVVLGSVLERLGGYGNVVNLFAGAQAHMDHVKYFNLPKEHLARTLVHYPLTGLAEAERAXXXXXXXXXXXXXXXXDKRFLPTAEEEVKARASGKFVVYQKPVGVNERVE-------EGKIGKGEEEGDSFDRPKWLKYLEKKRSRLRALAEGRRLLLEGTDCLIVACRHDPAVVVPRLLPFMQEGAAFAVYCEFLEPLVALQDLLMDAGMLRLQLLSTWWREYQVMPGRSHPHMNMSADGGCVLTGIKISD 499
            S   A+    CT T  P  P               VI EG  VI Q  DGR FF        +R+G+   +L  +IG  YG++ E     LV +  T  L+ D  V    G+ F   G             DNR + DTN+AQ +   +I EL+  GASG  IIQ L  NS TW+ KT F+KQK+ +KK  KY+ RVR +     ++ +   +K+   K   +R DS+ Q+L YGN+ AG +VL+ D+  G+V G++ ER GG G ++  + G Q   D ++ FN  K  L    +HY                             R L   EE+V   A     V +  +   ER +                           K   +K S +R  A       E +D L++A  +DP  V+  LLP++     F VY EFLE + A+ D         LQL  TW RE QV+PGR+HP MNMSA  G +L+GIKI D
Sbjct:    4 SSIAAADGGACTSTEAPRLPY--------------VIYEGDTVICQTSDGRMFFQAVAKDESIRVGKKVANLKPVIGSFYGAIFEEQNKKLVKV--TGGLFPD-PVAPETGDGFVPDG-------------DNRHYADTNSAQTLKQTDIGELREKGASGKEIIQKLVENSSTWETKTEFSKQKYLKKKQQKYMPRVRFLRCTAESLCRTYRLKNP-AKICNLREDSLGQILVYGNIFAGGQVLVVDTCMGLVTGAIAERQGGSGRIICPYEGQQPAADILRRFNFDKRTLES--IHY-----------------------MPFKQVRLLEMEEEDVVEPAK----VARDGLTPEEREQLAAXXXXXXXXXXXXXXXXXXXXXXQTKLFRQKPSTIREWAR------EKSDSLVIAANYDPEEVLMALLPYLGRSKPFVVYSEFLEKMEAIID---------LQLNETWTRENQVLPGRTHPEMNMSACSGYLLSGIKILD 429          
BLAST of NO19G02140 vs. NCBI_GenBank
Match: GAX26077.1 (tRNA (adenine-N(1)-)-methyltransferase non-catalytic subunit [Fistulifera solaris])

HSP 1 Score: 199.1 bits (505), Expect = 3.400e-47
Identity = 149/508 (29.33%), Postives = 251/508 (49.41%), Query Frame = 0
Query:   30 PLASQPAALPVIEEGAWVILQMGDGRNFF--ACAQSKGM---MRLGRVNISLSGLIGVPYGSVLEVHPDGLVPLPGTNELY--EDLAVGDMDGNEFTRGGGPASVGEYDGATSDNRDFTDTNTAQRMTMVEIEELKNSGASGHAIIQALASNSDTWDKKTAFAKQKWTRKKAHKYVVRVRAVAGNGTNVVQALFVKSGLVKSTAIRPDSIAQLLSYGNVSAGSRVLLFDSYSGVVLGSVLERLGGYGNVVNLFAGAQAHMDHVKYFNLPKEHLARTLVHYPLTGLAEAERAXXXXXXXXXXXXXXXXDKRFLPTAEEEVKARASGKFVVYQKPVGVNERVEEGKIGKGEEEGDSFDRPKWLKYLEKKRSRLRALAEGRRLLLEGTDCLIVACRHDPAVVVPRLLPFMQEGAAFAVYCEFLEPL-VALQDLLMDAGMLRLQLLSTWWREYQVMPGRSHPHMNMSADGGCVLTGIKISDGDKICGGPSM-EGVEAQEREAVGGNGNSRKR 529
            PL + P     ++ G   +L   DGR  F     + KGM   +++ + +     LIG+PYG+VLEV  + L+PLP   +L     LA   +D  E +      + G  +    DNR   DTNT+Q +   E+ EL+NSG  G  I++ +  NS T+ +KT +++ K+  +K  KY  R R +   G  + +A+F+K    +   +R D++ Q+LSY NVSAG +VL++++  G++ G++ +R+GGYG +++++ G Q   + +         L++  + +P     E+                   D       EEEV      + V+       N   +  +      + + F   +  ++  +K +R   L    ++L   +DC++VA R+D    +  LLP +     F VYCEF+EPL +   +L      + L+L  TW REYQ++PGR+HP+M M   GG +LTGIK+   D + G   + E +  + R+ +GG    R R
Sbjct:   25 PLLTLP--FNTLQVGEHFLLHFSDGRQVFGQCLTKVKGMTPTVKINKRSYPTHNLIGLPYGTVLEVERNFLLPLPAGEDLIPSNPLAATKVD-EEISNENDAGTAGARE---RDNRHIVDTNTSQALDQKELVELRNSGTEGAKIVEKIIENSSTFAQKTDYSRAKYVVRKQQKYQPRCRLIRCTGPTICEAMFLKDA-KRIMNMRDDTLGQILSYANVSAGCQVLVWETCYGIITGTLAQRMGGYGQILSIYTGQQHSFNEI---------LSKFNLSFP-----ESSSISWVHSGDIYSNSDENDD-------EEEVDVEKKEREVIQWPCPLQNHTRKYIETFPTRAKQEQFLMKRAARF-ARKLTRRTPLEARSQVLSRQSDCVVVAVRYDATETLLALLPHLAPSCPFVVYCEFIEPLTLCFLELQRKNLAVNLRLSDTWAREYQILPGRTHPNMTMRQSGGFLLTGIKL---DPVFGINELDEDLLKEIRQQMGGRRGKRPR 500          
The following BLAST results are available for this feature:
BLAST of NO19G02140 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
GAY04532.18.600e-5130.99Hypothetical protein PINS_012352 [Pythium insidios... [more]
GAX99241.15.600e-5030.79Hypothetical protein PINS_007073 [Pythium insidios... [more]
ETI30962.13.600e-4932.87hypothetical protein F443_21994 [Phytophthora para... [more]
ETK71349.16.800e-4832.67hypothetical protein L915_21397 [Phytophthora para... [more]
XP_008915171.16.800e-4832.87hypothetical protein PPTG_18823 [Phytophthora para... [more]
ETO59693.18.900e-4832.67hypothetical protein F444_22014 [Phytophthora para... [more]
GAX24305.11.200e-4731.49tRNA (adenine-N(1)-)-methyltransferase non-catalyt... [more]
CBN75132.12.600e-4730.39conserved unknown protein [Ectocarpus siliculosus][more]
KUF81117.13.400e-4732.53tRNA (adenine(58)-N(1))-methyltransferase non-cata... [more]
GAX26077.13.400e-4729.33tRNA (adenine-N(1)-)-methyltransferase non-catalyt... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL012nonsL012Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR034ncniR034Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR039ngnoR039Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK004552NSK004552Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO19G02140.1NO19G02140.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|653891gene_7614Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100030g2gene6746Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO19G02140.1NO19G02140.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO19G02140 ID=NO19G02140|Name=NO19G02140|organism=Nannochloropsis oceanica|type=gene|length=1602bp
ATGACCGATGTCAGCGGCACCGAAGCTTCCGCAACCGCTTGTTGTACCCG
CACATCTCCTCCTCTTCCACCCATTACAACCTCCCCTCCTCTGGCCTCAC
AACCAGCCGCACTTCCCGTCATCGAAGAAGGCGCCTGGGTAATCCTGCAA
ATGGGAGATGGCCGAAATTTTTTTGCTTGCGCGCAGTCCAAGGGTATGAT
GCGTCTTGGTAGGGTTAATATCTCGCTCAGTGGATTGATAGGTGTGCCCT
ATGGCAGTGTCTTGGAGGTCCACCCGGATGGTCTAGTCCCTCTGCCGGGT
ACGAACGAGCTCTACGAAGACCTTGCCGTGGGCGACATGGACGGAAACGA
ATTCACCCGAGGAGGAGGACCTGCGAGCGTGGGGGAGTATGATGGTGCTA
CCTCGGATAACAGGGATTTTACGGACACAAACACGGCGCAGCGCATGACC
ATGGTCGAGATTGAAGAGCTCAAGAATAGTGGAGCATCTGGCCACGCGAT
CATTCAAGCCTTGGCTTCGAATTCAGACACCTGGGACAAAAAAACGGCGT
TCGCAAAGCAGAAGTGGACCAGGAAAAAGGCGCATAAATACGTCGTGCGC
GTCAGAGCAGTAGCCGGGAACGGGACAAATGTGGTGCAAGCCCTCTTTGT
GAAGTCGGGCCTTGTTAAGAGCACTGCCATCCGTCCAGACAGTATCGCCC
AACTCCTCTCCTATGGCAATGTCTCCGCCGGCTCCCGTGTCTTGCTCTTC
GATTCCTACTCGGGCGTGGTGCTGGGCTCGGTCCTTGAGCGATTGGGAGG
GTATGGAAATGTGGTGAATTTATTCGCGGGGGCTCAGGCTCATATGGACC
ATGTCAAGTATTTTAATTTGCCCAAGGAACATTTGGCCAGGACGCTGGTC
CATTATCCGTTAACGGGATTGGCAGAGGCGGAGAGGGCGAGGAGGAGGAG
GATGGAGGCCGGGGTGGAGGAGGAGGAGGAGGAGGGGGATAAGAGGTTCT
TACCGACGGCCGAGGAGGAGGTCAAGGCGCGGGCGTCGGGGAAGTTCGTC
GTGTACCAGAAGCCAGTAGGTGTGAATGAAAGGGTGGAGGAAGGGAAGAT
TGGCAAGGGAGAGGAAGAAGGGGATAGCTTTGATCGACCCAAGTGGTTGA
AGTACCTGGAGAAGAAGCGGAGTCGTCTCCGGGCCTTAGCGGAGGGCAGG
AGATTGTTGTTGGAAGGGACAGATTGCTTGATCGTAGCCTGTCGGCATGA
TCCGGCAGTTGTGGTGCCGAGGTTGTTGCCTTTCATGCAGGAGGGGGCGG
CGTTTGCAGTGTACTGTGAGTTTTTGGAGCCCTTGGTCGCCTTGCAGGAC
TTGTTGATGGACGCGGGCATGCTGAGACTGCAGTTGCTGAGCACATGGTG
GCGTGAGTATCAGGTTATGCCCGGCAGGTCACATCCGCATATGAACATGA
GTGCGGATGGTGGGTGCGTCTTGACGGGCATAAAGATAAGCGATGGCGAT
AAGATATGTGGGGGGCCCTCGATGGAGGGAGTGGAGGCGCAGGAGCGGGA
GGCGGTGGGGGGAAATGGAAATTCTAGAAAGCGGTACCGGAAGCAGAGAT
GA
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protein sequence of NO19G02140.1

>NO19G02140.1-protein ID=NO19G02140.1-protein|Name=NO19G02140.1|organism=Nannochloropsis oceanica|type=polypeptide|length=534bp
MTDVSGTEASATACCTRTSPPLPPITTSPPLASQPAALPVIEEGAWVILQ
MGDGRNFFACAQSKGMMRLGRVNISLSGLIGVPYGSVLEVHPDGLVPLPG
TNELYEDLAVGDMDGNEFTRGGGPASVGEYDGATSDNRDFTDTNTAQRMT
MVEIEELKNSGASGHAIIQALASNSDTWDKKTAFAKQKWTRKKAHKYVVR
VRAVAGNGTNVVQALFVKSGLVKSTAIRPDSIAQLLSYGNVSAGSRVLLF
DSYSGVVLGSVLERLGGYGNVVNLFAGAQAHMDHVKYFNLPKEHLARTLV
HYPLTGLAEAERARRRRMEAGVEEEEEEGDKRFLPTAEEEVKARASGKFV
VYQKPVGVNERVEEGKIGKGEEEGDSFDRPKWLKYLEKKRSRLRALAEGR
RLLLEGTDCLIVACRHDPAVVVPRLLPFMQEGAAFAVYCEFLEPLVALQD
LLMDAGMLRLQLLSTWWREYQVMPGRSHPHMNMSADGGCVLTGIKISDGD
KICGGPSMEGVEAQEREAVGGNGNSRKRYRKQR*
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Synonyms
Publications