NO19G02120, NO19G02120 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO19G02120 vs. NCBI_GenBank
Match: XP_005853791.1 (hypothetical protein NGA_2112100, partial [Nannochloropsis gaditana CCMP526] >EKU22571.1 hypothetical protein NGA_2112100, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 225.7 bits (574), Expect = 1.500e-55 Identity = 126/232 (54.31%), Postives = 147/232 (63.36%), Query Frame = 0 Query: 1 MEASDLPAVVRLAAREFVPLNELPEYGGMSSTGFGEQVEAWWLRQNVYWGMLARHMYPDRKDHQVFLLLEEQGGRKSARDTPYYRKGKKMGEEEGQGRENEDTTLLGMIELSLQPTTGLPPPLLPLPPPIKRFLALLGFPVHPYISNLLVDASVRRQGHAARLVAHAESVAREDGFNLIFLHADGDYRPAVKLYETLGYKGGEEXXXXXXXXRRGWVEKWVGMKLRYFRKEL 233 M SDL AVV LAAREF PLNEL EYGG S G E+ EAW LRQ V WGMLAR++YPD DH+V LL+E + G YR G ELSLQPTTGLPPPL PL P +K ALLG+P+ PYISNLLVD +VRRQGHAARL+A AE+ AR G + ++LHAD DY PAV+LYE LGY+ R WV++W G++LRY RKEL Sbjct: 2 MSLSDLSAVVLLAAREFTPLNELAEYGGTPSGGLVEEFEAWGLRQKVRWGMLARYLYPD--DHEVLLLVEGEEG--------VYR-GXXXXXXXXXXXXXXXXXXXXXXELSLQPTTGLPPPLFPLSPAVKGLFALLGWPLQPYISNLLVDVTVRRQGHAARLLAVAEAEARARGHSWVYLHADSDYLPAVRLYERLGYR--------DVGRGRAWVDRWTGLRLRYMRKEL 214
BLAST of NO19G02120 vs. NCBI_GenBank
Match: EWM23678.1 (hypothetical protein Naga_100030g3 [Nannochloropsis gaditana]) HSP 1 Score: 95.1 bits (235), Expect = 3.000e-16 Identity = 48/74 (64.86%), Postives = 54/74 (72.97%), Query Frame = 0 Query: 1 MEASDLPAVVRLAAREFVPLNELPEYGGMSSTGFGEQVEAWWLRQNVYWGMLARHMYPDRKDHQVFLLLEEQGG 75 M SDL AVV LAAREF PLNEL EYGG S G E+ EAW LRQ V WGMLAR++YPD DH+V LL+E + G Sbjct: 128 MSLSDLSAVVLLAAREFTPLNELAEYGGTPSGGLVEEFEAWGLRQKVRWGMLARYLYPD--DHEVLLLVEGEEG 199
BLAST of NO19G02120 vs. NCBI_GenBank
Match: CBN78537.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 93.2 bits (230), Expect = 1.100e-15 Identity = 61/164 (37.20%), Postives = 88/164 (53.66%), Query Frame = 0 Query: 38 VEAWWLRQNVYWGMLARHMY-PDRKDHQVFLLLEEQGGRKSARDTPYYRKGKKMGEEEGQGRENEDTTLLGMIELSLQPTTGLPPPLLPLPPPIKRFLALLGFPVHPYISNLLVDASVRRQGHAARLVAHAESVAREDGFNLIFLHADGDYRPAVKLYETLGYK 201 +E WLR + WG R + +DH+VF + +E K + +G +G+G ++ L + E+SLQ G P P+P KR + G PV PYISN+LV + RRQG A RL+ E AR+ GF ++LH D Y PAV++YET+GY+ Sbjct: 60 LEMIWLRIMIQWGFSMREQFGKGGRDHRVFCISDE--------------KARNLG-GDGEGGSSK-PPLAALAEISLQVPNGKTSPPFPVPLWYKRIVGWPG-PVLPYISNVLVHRNARRQGLANRLMLRCEKQARDWGFTQVYLHVDLTYYPAVRMYETMGYE 206
BLAST of NO19G02120 vs. NCBI_GenBank
Match: GAX10388.1 (hypothetical protein FisN_3Lh608 [Fistulifera solaris]) HSP 1 Score: 84.3 bits (207), Expect = 5.300e-13 Identity = 66/208 (31.73%), Postives = 98/208 (47.12%), Query Frame = 0 Query: 1 MEASDLPAVVRLAAREFVPLNELPEYGGMSSTGFGEQVEAWWLRQNVYWGM---LARHMYPDRKDHQVFLLLEEQGGRKSARDTPYYRKGKKMGEEEGQGRENEDTTLLGMIELSLQPTTGLP---PPLLPLPPPIKR-FLALLGFPVHPYISNLLVDASVRRQGHAARLVAHAESVA-REDGFNLIFLHADGDYRPAVKLYETLGYK 201 ME DL +V L + EYG + T +Q++ WWL+ V M LA P KDH + + + S + TP ++GMIE+S QP LP PP +P+P +K+ + + G P+ +I NLL+D S RR+G A LVA E +A + G + LH D Y A +LY+++GY+ Sbjct: 1 MEPQDLTDIVDLC---------MDEYGKKNRTTLADQLDQWWLQLLVESTMRMKLALDASPLDKDHTILVATQ----NTSQQSTP---------------------RVIGMIEVSWQPV--LPDRIPPAVPIPLSLKKMYCQITGTPIEAWIGNLLIDPSFRRRGLAKLLVAATEGLASQRTGCTSLHLHCDAQYSAAQRLYQSMGYR 172
BLAST of NO19G02120 vs. NCBI_GenBank
Match: GAX20542.1 (hypothetical protein FisN_3Hh608 [Fistulifera solaris]) HSP 1 Score: 82.0 bits (201), Expect = 2.600e-12 Identity = 68/244 (27.87%), Postives = 111/244 (45.49%), Query Frame = 0 Query: 1 MEASDLPAVVRLAAREFVPLNELPEYGGMSSTGFGEQVEAWWLRQNVYWGMLARHMYPD---RKDHQVFLLLEEQGGRKSARDTPYYRKGKKMGEEEGQGRENEDTTLLGMIELSLQPTTGLP---PPLLPLPPPIKR-FLALLGFPVHPYISNLLVDASVRRQGHAARLVAHAESV-AREDGFNLIFLHADGDYRPAVKLYETLGYK-GGEEXXXXXXXXRRGWVEKWV---GMKLRYFRKEL 233 M+ DL +V L + EYG + T F +Q++ WWL++ + M + + KDH + + + + + R ++GMIE+S QP LP PP +P+P P+KR + + G P+ +I NLL++ S RR+G A LV+ E + A+ G + LH D Y A +LY+++GY+ +E W + G+ L Y RK+L Sbjct: 1 MDIQDLNDIVDLC---------MEEYGKKNRTNFADQLDQWWLQRLIDSTMRMKLVLDSSVLEKDHTILVATQHTCQQSTPR-------------------------VIGMIEVSWQPV--LPDRIPPAVPIPLPLKRMYCQVTGTPMEAWIGNLLIEPSFRRRGLAKVLVSATEGIAAQRTGCTSLHLHCDAQYSVAQRLYQSMGYRIVPKEDTPFTFDGGMAWKDSIYFVDGVALLYLRKDL 208 The following BLAST results are available for this feature:
BLAST of NO19G02120 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 5
Relationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO19G02120 ID=NO19G02120|Name=NO19G02120|organism=Nannochloropsis oceanica|type=gene|length=1241bpback to top protein sequence of NO19G02120.1 >NO19G02120.1-protein ID=NO19G02120.1-protein|Name=NO19G02120.1|organism=Nannochloropsis oceanica|type=polypeptide|length=233bpback to top Synonyms
Publications
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