NO19G02100, NO19G02100 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO19G02100 vs. NCBI_GenBank
Match: GAX10335.1 (hypothetical protein FisN_3Lh542 [Fistulifera solaris]) HSP 1 Score: 148.3 bits (373), Expect = 3.000e-32 Identity = 80/198 (40.40%), Postives = 111/198 (56.06%), Query Frame = 0 Query: 32 TPFDTVSKDELAVENKAMAGKSVFERAMADFNGRYPAVAALGLGPSAKAERWNGRHAMFGWIVLLATGYAQAHGLLP--EGGMDAKEWGTWVIVSTTNGEQVTIPAARAAIAIGHLHFGAVGVFAAYSKNSVKDRLLLEPGEKDEAPAGLFPALRPGLTKEAEMLNGRVAMLGLVALVAVSAATGQDILSVIDQGLGG 228 TP V +++ + +FE A AD+ ++PA A G GPS +AE+WNGRHAMFGW + AT Y + HGL+P E + K+WGT +S N TI RA I + HF V + A + S D L EP G P GLT+EAE+LNGR+AMLGL+ALV +A +D+L ++++ +GG Sbjct: 21 TPSKNVMPKATSMQGANLGAPEIFEDATADWAKQFPAFAKYGWGPSVQAEKWNGRHAMFGWFFICATAYCKGHGLIPDAESLVSFKDWGTLATISGKN----TITNERAIILAANAHFFGVSLMATFCPPSQGDTLFTEPTVNQPTGYGYMPKFNMGLTQEAEILNGRLAMLGLMALVVATAVEQKDMLDIVNEWVGG 214
BLAST of NO19G02100 vs. NCBI_GenBank
Match: EJK76917.1 (hypothetical protein THAOC_01290 [Thalassiosira oceanica]) HSP 1 Score: 145.6 bits (366), Expect = 1.900e-31 Identity = 80/188 (42.55%), Postives = 115/188 (61.17%), Query Frame = 0 Query: 53 SVFERAMADFNGRYPAVAALGLGPSAKAERWNGRHAMFGWIVLLATGYAQAHGLLPEG--GMDAKEWGTW-VIVSTTNGEQVTIPAARAAIAIGHLHFGAVGVFAAYSKNSVKDRLLLEPG--------EKDEAPAGLFPAL-RPGLTKEAEMLNGRVAMLGLVALVAVSAATGQDILSVIDQGLGGL 229 SVF+ A+ADF+ YP + G GPS +AE WNGRHAMFGW+V+ A Y++AHGL+P+ ++ K+WGT I +NG + T+ RA I I ++H VG+FA + D LLL+ E++ G+ P L + G+T EAE+ NGR+AM+GL+ VA S GQ ++ I++ LGGL Sbjct: 37 SVFDDAVADFDADYPEFSKWGWGPSVQAEIWNGRHAMFGWVVMCACAYSKAHGLIPDADQALNLKKWGTLATIADYSNGGKSTLTNERAIILIANVHAFMVGIFATIAPLPFSDTLLLDEDHPMYEWQMERNSKLGGVMPPLNKMGVTPEAELYNGRMAMMGLITCVAYSGIKGQSMIDTINEWLGGL 224
BLAST of NO19G02100 vs. NCBI_GenBank
Match: XP_005776430.1 (hypothetical protein EMIHUDRAFT_310333 [Emiliania huxleyi CCMP1516] >EOD24001.1 hypothetical protein EMIHUDRAFT_310333 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 145.2 bits (365), Expect = 2.500e-31 Identity = 87/188 (46.28%), Postives = 109/188 (57.98%), Query Frame = 0 Query: 55 FERAMADFNGRYPAVAALGLGPSAKAERWNGRHAMFGWIVLLATGYAQAHGLLPEG--GMDAKEWGTWVIVSTTNGEQVTIPAARAAIAIGHLHFGAVGVFAAYSKNSVKDRLLLEPGEKDEAPA-------GLFPALRPGLTKEAEMLNG---RVAMLGLVALVAVSAATGQDILSVIDQGLGGLLL 231 FE+ M+ F YP +A G GP+ KAERWNGRHAMFGW +LATG A+AHG +P+G + +WG G I RA I I H+H AV AA+ + D L L GE+DEAP GLF GL+ AEM NG R+AMLG++A+V SA +G+DIL V+D G GG LL Sbjct: 18 FEKGMSQFAADYPWLAKYGFGPTVKAERWNGRHAMFGWAAILATGVAKAHGWIPDGSTALTYADWGG----LAQQGFNTYISNERAIIMIAHVHALAVSAAAAFGPQVLGDSLTLLDGEEDEAPELRLSEPYGLFVNGAFGLSPAAEMANGARSRLAMLGIIAVVITSAISGKDILEVVDIGTGGNLL 201
BLAST of NO19G02100 vs. NCBI_GenBank
Match: XP_002177121.1 (early light induced protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC51584.1 early light induced protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 142.1 bits (357), Expect = 2.100e-30 Identity = 74/184 (40.22%), Postives = 118/184 (64.13%), Query Frame = 0 Query: 54 VFERAMADFNGRYPAVAALGLGPSAKAERWNGRHAMFGWIVLLATGYAQAHGLLPEGGM--DAKEWGTWVIVSTTNGEQVTIPAARAAIAIGHLHFGAVGVFAAYSKNSVKDRLLLEP--------GEKDEAPAGLFPALRPGLTKEAEMLNGRVAMLGLVALVAVSAATGQDILSVIDQGLGG 228 +++ A++D+ ++PA + G GPS +AE+WNGRHAMFGW + AT Y + HGL+P+ M D K+WGT ++T +G+ TI RA I + + HF A+ + A D L ++P E+++ G PAL+ GLT+EAE++NGR+AMLGLV L+ +A +GQ++L ++++ +GG Sbjct: 42 LYDDAVSDWEKQFPAFSKWGWGPSVQAEKWNGRHAMFGWFFICATAYCKGHGLIPDPEMLLDLKQWGT---LATISGKD-TISNERAIILVANAHFFALSLAATICPLPFGDSLFVDPNHPNYEAMAERNKNGFGYLPALKFGLTEEAEIINGRLAMLGLVMLIGATATSGQNMLDIVNEWVGG 221
BLAST of NO19G02100 vs. NCBI_GenBank
Match: XP_005831727.1 (red Elip [Guillardia theta CCMP2712] >EKX44747.1 red Elip [Guillardia theta CCMP2712]) HSP 1 Score: 137.1 bits (344), Expect = 6.900e-29 Identity = 84/233 (36.05%), Postives = 124/233 (53.22%), Query Frame = 0 Query: 5 AILAVLACAANAFVFPTP------KVSQTVVRGTPFDTVSKDELAVENKAMAGKSVFERAMADFNGRYPAVAALGLGPSAKAERWNGRHAMFGWIVLLATGYAQAHGLLPEGG--MDAKEWGTWVIVSTTNGEQVTIPAARAAIAIGHLHFGAVGVFAAYSKNSVKDRLLLEPGEKDEAPAGLFPALRPGLTKEAEMLNGRVAMLGLVALVAVSAATGQDILSVIDQGLGGLL 230 +IL + ACA+ A P+ + S V RG ++ + + MAG A+ F P +A+ GLG + AERWNGRHAMFG ++ + Y GL+P+G +D +WG V G I RA I + H+H V + AA++ +D L+ + G K EAPAGL P + GLT EAE++NGR+AMLG++++ + TG + VI+ GLG +L Sbjct: 4 SILVLSACASAAAFAPSASPSLSLRSSPAVQRGPARHGLATVSMQAKGNPMAG------AVEKFASENPELASRGLGVTTNAERWNGRHAMFGIFFMVLSSYLHGRGLIPDGDKILDVSQWGPLV----NGGFNAPITNERAIILVAHVHVLFVSILAAFAPFGFQDTLVKDQGYKPEAPAGLIPPFKTGLTAEAELINGRLAMLGVISITTAALFTGTSVTDVINLGLGKIL 226
BLAST of NO19G02100 vs. NCBI_GenBank
Match: CEL92262.1 (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 136.7 bits (343), Expect = 9.000e-29 Identity = 77/187 (41.18%), Postives = 103/187 (55.08%), Query Frame = 0 Query: 47 KAMAGK---SVFERAMADFNGRYPAVAALGLGPSAKAERWNGRHAMFGWIVLLATGYAQAHGLLPEGGMDAKEWGTWVIVSTTNGEQVTIPAARAAIAIGHLHFGAVGVFAAYSKNSVKDRLLLEPGEKDEAPAGLFPALRPGLTKEAEMLNGRVAMLGLVALVAVSAATGQDILSVIDQGLGGLLL 231 KA AG+ SVF + F + +G GP+A AERWNGRHAM GW+ LL YA+ G G +E W+ G++ IP + + + H + + A +S+ D+ GE DE PAGL P PGLTK AEMLNGR+AMLGLV L+ + TGQ + V+D+ LGGLL+ Sbjct: 43 KAAAGRLDMSVFNEGVEKFGKDFAMPKKMGFGPTANAERWNGRHAMAGWVSLLFIAYAKYTGNPIFGFPGPEETFKWI---AYGGKEAEIPLQNIYVLVFNAHLLMISLIAFLFNDSLPDKFWFSDGEDDEEPAGLIPRFEPGLTKGAEMLNGRLAMLGLVVLLVTAFGTGQSVDQVMDKALGGLLI 226
BLAST of NO19G02100 vs. NCBI_GenBank
Match: XP_005780198.1 (hypothetical protein EMIHUDRAFT_463191 [Emiliania huxleyi CCMP1516] >EOD27769.1 hypothetical protein EMIHUDRAFT_463191 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 135.6 bits (340), Expect = 2.000e-28 Identity = 80/170 (47.06%), Postives = 98/170 (57.65%), Query Frame = 0 Query: 55 FERAMADFNGRYPAVAALGLGPSAKAERWNGRHAMFGWIVLLATGYAQAHGLLPEG--GMDAKEWGTWVIVSTTNGEQVTIPAARAAIAIGHLHFGAVGVFAAYSKNSVKDRLLLEPGEKDEAPAGLFPALRP--GLTKEAEMLNGRVAMLGLVALVAVSAATGQDILSV 221 FE+ M+ F YP +A G GP+ KAERWNGRHAMFGW+ +L TG A++HG LP G + EWG G I RA I I H+H AV AA+ + D L L GEKDE P GLF L+ GLT AEM NGR+AM+G++A+ ATG LSV Sbjct: 39 FEKGMSQFAADYPWLAKYGFGPTVKAERWNGRHAMFGWLAILGTGVAKSHGWLPSGDVALTYNEWGG----LAQQGFNTYITNERAIIMIAHVHALAVSAAAAFGPQVLGDSLTLLDGEKDEDPYGLFVPLKGTFGLTPAAEMANGRMAMMGIIAV-----ATGLHRLSV 199
BLAST of NO19G02100 vs. NCBI_GenBank
Match: OEU13194.1 (not-an-Elip [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 135.6 bits (340), Expect = 2.000e-28 Identity = 73/189 (38.62%), Postives = 111/189 (58.73%), Query Frame = 0 Query: 49 MAGKSVFERAMADFNGRYPAVAALGLGPSAKAERWNGRHAMFGWIVLLATGYAQAHGLLPEGG--MDAKEWGTWVIVSTTNGEQVTIPAARAAIAIGHLHFGAVGVFAAYSKNSVKDRLLLEPGE--------KDEAPAGLFPALRPGLTKEAEMLNGRVAMLGLVALVAVSAATGQDILSVIDQGLGG 228 +A ++E A A + + +A G GPS AE+WNGRHAMFGW + T YA+ HGL+P+ ++ KEWGT ++T G+ TI RA I + + HF A+ + A D LLL+P + ++ P G PA + GLT+EAEM+NGR+AMLGL++L+ +A + +L ++++ GG Sbjct: 36 IANPEMYEAAQAKWAEEFKPLAKYGWGPSVHAEKWNGRHAMFGWFFICCTAYAKGHGLIPDMDVPLNLKEWGT---LATITGKG-TITNGRAVILLANAHFFAISLMATICPLPFGDSLLLDPDDESYEKSMARNNEPFGYLPAFKSGLTEEAEMINGRLAMLGLISLIFATAIEQKPMLDIVNEWTGG 220
BLAST of NO19G02100 vs. NCBI_GenBank
Match: CAH25365.1 (putative low molecular mass early light-inducible protein HV60, partial [Guillardia theta]) HSP 1 Score: 134.0 bits (336), Expect = 5.800e-28 Identity = 70/174 (40.23%), Postives = 101/174 (58.05%), Query Frame = 0 Query: 58 AMADFNGRYPAVAALGLGPSAKAERWNGRHAMFGWIVLLATGYAQAHGLLPEGG--MDAKEWGTWVIVSTTNGEQVTIPAARAAIAIGHLHFGAVGVFAAYSKNSVKDRLLLEPGEKDEAPAGLFPALRPGLTKEAEMLNGRVAMLGLVALVAVSAATGQDILSVIDQGLGGLL 230 A+ F P +A+ GLG + AERWNGRHAMFG ++ + Y GL+P+G +D +WG V G I RA I + H+H V + AA++ +D L+ + G K EAPAGL P + GLT EAE++NGR+AMLG++++ + TG + VI+ GLG +L Sbjct: 19 AVEKFASENPELASRGLGVTTNAERWNGRHAMFGIFFMVLSSYLHGRGLIPDGDKILDVSQWGPLV----NGGFNAPITNERAIILVAHVHVLFVSILAAFAPFGFQDTLVKDQGYKPEAPAGLIPPFKTGLTAEAELINGRLAMLGVISITTAALFTGTSVTDVINLGLGKIL 188
BLAST of NO19G02100 vs. NCBI_GenBank
Match: OEU18584.1 (low molecular mass early light-inducible protein HV60 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 134.0 bits (336), Expect = 5.800e-28 Identity = 72/184 (39.13%), Postives = 109/184 (59.24%), Query Frame = 0 Query: 54 VFERAMADFNGRYPAVAALGLGPSAKAERWNGRHAMFGWIVLLATGYAQAHGLLPEGG--MDAKEWGTWVIVSTTNGEQVTIPAARAAIAIGHLHFGAVGVFAAYSKNSVKDRLLLEPGE--------KDEAPAGLFPALRPGLTKEAEMLNGRVAMLGLVALVAVSAATGQDILSVIDQGLGG 228 ++E A A + + +A G GPS AE+WNGRHAMFGW + T YA+ HGL+P+ ++ KEWGT ++T G+ TI RA I + + HF A+ + A D LLL+P + ++ P G PA + GLT+EAEM+NGR+AMLGL++L+ +A + +L ++++ GG Sbjct: 1 MYEAAQAKWAEEFKPLAKYGWGPSVHAEKWNGRHAMFGWFFICCTAYAKGHGLIPDMDVPLNLKEWGT---LATITGKG-TITNGRAVILLANAHFFAISLMATICPLPFGDSLLLDPDDESYEKSMARNNEPFGYLPAFKSGLTEEAEMINGRLAMLGLISLIFATAIEQKPMLDIVNEWTGG 180 The following BLAST results are available for this feature:
BLAST of NO19G02100 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO19G02100 ID=NO19G02100|Name=NO19G02100|organism=Nannochloropsis oceanica|type=gene|length=2064bpback to top protein sequence of NO19G02100.1 >NO19G02100.1-protein ID=NO19G02100.1-protein|Name=NO19G02100.1|organism=Nannochloropsis oceanica|type=polypeptide|length=233bpback to top Synonyms
Publications
|