NO19G02100, NO19G02100 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO19G02100 vs. NCBI_GenBank
Match: EWM23709.1 (Chlorophyll A-B binding protein [Nannochloropsis gaditana]) HSP 1 Score: 397.9 bits (1021), Expect = 2.200e-107 Identity = 203/234 (86.75%), Postives = 215/234 (91.88%), Query Frame = 0 Query: 1 MKTAAILAVLACAANAFVFPTPKVSQTVVRGTPFDTVSKDELAVENKAMAGKSVFERAMADFNGRYPAVAALGLGPSAKAERWNGRHAMFGWIVLLATGYAQAHGLLPEGGMDAKEWGTWVIVST--TNGEQVTIPAARAAIAIGHLHFGAVGVFAAYSKNSVKDRLLLEPGEKDEAPAGLFPALRPGLTKEAEMLNGRVAMLGLVALVAVSAATGQDILSVIDQGLGGLLLKA 233 MKTAAI ++LA AANAFV PTPK QTVV+GTPFDTV K E+AVENKA++G SVFERAMADFNGRYPAVAALGLGPS KAERWNGRHAMFGWI LLATGYAQAHGLLPEGGMDAKEWGTWVIV+T G TIPAARAAIAI HLH GAVGVFAAYSKNSVKDRLLLEPGEKDEAPAGLFPALRPGLTK+AE+LNGR+AMLGL+ALVAV+AATGQDILSVIDQGLGGLLLKA Sbjct: 56 MKTAAIFSLLAVAANAFVLPTPKAPQTVVKGTPFDTVDKAEMAVENKALSGMSVFERAMADFNGRYPAVAALGLGPSVKAERWNGRHAMFGWIALLATGYAQAHGLLPEGGMDAKEWGTWVIVNTDPATGAVTTIPAARAAIAIAHLHLGAVGVFAAYSKNSVKDRLLLEPGEKDEAPAGLFPALRPGLTKDAEILNGRIAMLGLIALVAVAAATGQDILSVIDQGLGGLLLKA 289
BLAST of NO19G02100 vs. NCBI_GenBank
Match: KOO22702.1 (low molecular mass early light-inducible protein hv60 [Chrysochromulina sp. CCMP291]) HSP 1 Score: 172.9 bits (437), Expect = 1.100e-39 Identity = 101/224 (45.09%), Postives = 131/224 (58.48%), Query Frame = 0 Query: 9 VLACAANAFVFPTPKVSQTVVRGTPFDTVSKDELAVENKAMAGKSVFERAMADFNGRYPAVAALGLGPSAKAERWNGRHAMFGWIVLLATGYAQAHGLLPEG--GMDAKEWGTWVIVSTTNGEQVTIPAARAAIAIGHLHFGAVGVFAAYSKNSVKDRLLLEPGEKDEAPAGLFPALRPGLTKEAEMLNGRVAMLGLVALVAVSAATGQDILSVIDQGLGGLLL 231 +LA A +A F P V+ AV+ A +VFE M F G +P +A G GP+ KAERWNGRHAMFGW++++ATGYA++HGL+P G + K+WG + G I RA I + H+H AV AA+ + D L L GE DE P GLF L GLT AEMLNGR+AMLGL+A+V+ S A+G DIL V++ G+GGLLL Sbjct: 1 MLALAVSALAFQAPGVAL--------------RPAVKQTAAPQMTVFENGMQQFKGDFPWLAKYGFGPTVKAERWNGRHAMFGWVMIVATGYAKSHGLIPSGDVALQYKDWGGLAQL----GLNQYISTERAVIMMVHVHALAVSAAAAFGPQVLGDTLTLLDGETDEEPYGLFVPLESGLTPAAEMLNGRLAMLGLIAVVSASMASGMDILEVVNIGVGGLLL 206
BLAST of NO19G02100 vs. NCBI_GenBank
Match: XP_005704154.1 (hypothetical protein Gasu_47790 [Galdieria sulphuraria] >EME27634.1 hypothetical protein Gasu_47790 [Galdieria sulphuraria]) HSP 1 Score: 172.6 bits (436), Expect = 1.500e-39 Identity = 88/178 (49.44%), Postives = 117/178 (65.73%), Query Frame = 0 Query: 54 VFERAMADFNGRYPAVAALGLGPSAKAERWNGRHAMFGWIVLLATGYAQAHGLLPEGG--MDAKEWGTWVIVSTTNGEQVTIPAARAAIAIGHLHFGAVGVFAAYSKNSVKDRLLLEPGEKDEAPAGLFPALRPGLTKEAEMLNGRVAMLGLVALVAVSAATGQDILSVIDQGLGGLL 230 +F +AM DF YP + GLG ++KAERWNGRHAMFG + ++ TGYA+ HG +P +D ++WGT V+ G I RA + + H+H V + AA + S +DRLLL PGEKDE PAGL P + GLTKEAE+ NGR+AMLG+ +VA S TGQ IL V+++GLG +L Sbjct: 45 IFRQAMKDFASEYPDFVSRGLGVTSKAERWNGRHAMFGLLAIVLTGYAKGHGWIPNADQVLDMQQWGTLVM----EGFNQKITNERAIVLVAHIHVLLVSIAAAIAPFSFQDRLLLRPGEKDEEPAGLLPPFKLGLTKEAELWNGRLAMLGVTFIVATSIITGQSILDVVNKGLGNIL 218
BLAST of NO19G02100 vs. NCBI_GenBank
Match: OSX74445.1 (hypothetical protein BU14_0289s0024 [Porphyra umbilicalis]) HSP 1 Score: 172.6 bits (436), Expect = 1.500e-39 Identity = 92/178 (51.69%), Postives = 113/178 (63.48%), Query Frame = 0 Query: 54 VFERAMADFNGRYPAVAALGLGPSAKAERWNGRHAMFGWIVLLATGYAQAHGLLPEGG--MDAKEWGTWVIVSTTNGEQVTIPAARAAIAIGHLHFGAVGVFAAYSKNSVKDRLLLEPGEKDEAPAGLFPALRPGLTKEAEMLNGRVAMLGLVALVAVSAATGQDILSVIDQGLGGLL 230 VF +AM +F YP A G G + KAERWNGRH M GW++L+ATGYA+ HGL+PE +D K+WGT + G Q I RA I I H+H V V AA + +D+LLL PGE+D+APAGL P + PGL K AE NGRVAMLGL+ LV S AT IL ++ GLG LL Sbjct: 49 VFTQAMDEFKKEYPDFAKRGWGATVKAERWNGRHVMAGWVILVATGYAKGHGLIPEASSLLDLKQWGTLAAL----GNQQPISNERAIILIAHVHLLFVSVAAALAPFPFQDKLLLAPGEEDDAPAGLIPPMAPGLNKTAETWNGRVAMLGLLVLVCTSVATKTPILDTLNAGLGNLL 222
BLAST of NO19G02100 vs. NCBI_GenBank
Match: CBJ31450.1 (CAB/ELIP/HLIP superfamily of protein [Ectocarpus siliculosus]) HSP 1 Score: 169.1 bits (427), Expect = 1.600e-38 Identity = 104/232 (44.83%), Postives = 133/232 (57.33%), Query Frame = 0 Query: 5 AILAVLACAANAFVFPTPKVSQTVVRGTPFDTVSKDELAVENKAMAGK--SVFERAMADFNGRYPAVAALGLGPSAKAERWNGRHAMFGWIVLLATGYAQAHGLLPEG--GMDAKEWGTWVIVSTTNGEQVTIPAARAAIAIGHLHFGAVGVFAAYSKNSVKDRLLL--EPGEKDEAPAGLFPALRPGLTKEAEMLNGRVAMLGLVALVAVSAATGQDILSVIDQGLGGLLL 231 A+ A + A AFV PT T G + + A MA SVF+ A A+F +P + G GP+AKAERWNGRHAMFGW ++ATGY QAH L+P+ +D K WGT + TT E TI RA I +GH+H AV V A + S +D+L L + GEKD GL P+ PGLT EAE+ NGR+AM+GLV + TGQ L V++ GLGGLL+ Sbjct: 6 ALCAAMVAGAQAFV-PT----TTAFSGARVASPASASAATTTPRMAAGSFSVFDNAQAEFAAEFPEYSKYGWGPTAKAERWNGRHAMFGWAAIIATGYCQAHNLIPDADVALDPKVWGT--LAYTTGTE--TITNERAIIMMGHVHALAVSVCATVAPLSFQDKLFLDVDAGEKDAPAPGLIPSFVPGLTPEAEIFNGRMAMMGLVVTATTALTTGQSFLEVVNAGLGGLLM 228
BLAST of NO19G02100 vs. NCBI_GenBank
Match: OSX69387.1 (hypothetical protein BU14_1564s0002 [Porphyra umbilicalis]) HSP 1 Score: 169.1 bits (427), Expect = 1.600e-38 Identity = 90/178 (50.56%), Postives = 114/178 (64.04%), Query Frame = 0 Query: 54 VFERAMADFNGRYPAVAALGLGPSAKAERWNGRHAMFGWIVLLATGYAQAHGLLPEGG--MDAKEWGTWVIVSTTNGEQVTIPAARAAIAIGHLHFGAVGVFAAYSKNSVKDRLLLEPGEKDEAPAGLFPALRPGLTKEAEMLNGRVAMLGLVALVAVSAATGQDILSVIDQGLGGLL 230 VF RAM +F YP A G G + KAERWNGRH M GW++L+ATGYA+ HGL+P+ ++ KEWGT + G Q I RA I I H+H V V AA + + +D+LLL PGE+D+ PAGL P L+ GL K AE NGRVAMLGL+ LV S AT +L +++GLG LL Sbjct: 49 VFTRAMDEFKNEYPDFAKRGWGATVKAERWNGRHVMAGWVILVATGYAKGHGLIPDASSLLNLKEWGTLAAL----GNQQPITNERAIILIAHVHLLFVSVAAALAPFAFQDKLLLAPGEQDDKPAGLIPPLQFGLNKNAETWNGRVAMLGLLVLVGSSVATKTPVLDTLNKGLGNLL 222
BLAST of NO19G02100 vs. NCBI_GenBank
Match: AAM94016.1 (low molecular mass early light-inducible protein HV60 [Griffithsia japonica]) HSP 1 Score: 162.5 bits (410), Expect = 1.500e-36 Identity = 82/176 (46.59%), Postives = 110/176 (62.50%), Query Frame = 0 Query: 55 FERAMADFNGRYPAVAALGLGPSAKAERWNGRHAMFGWIVLLATGYAQAHGLLPEGG--MDAKEWGTWVIVSTTNGEQVTIPAARAAIAIGHLHFGAVGVFAAYSKNSVKDRLLLEPGEKDEAPAGLFPALRPGLTKEAEMLNGRVAMLGLVALVAVSAATGQDILSVIDQGLGGL 229 F +AM D+ +P+ A G G + KAERWNGRH MFGW+V T Y + HGLLP+ +D +WG + G+ I RA + + H+H V + AA + S +D+LLLEPGE D+APAGLFP + PGLTK+AE+ NGRVAM+GL+ LVA + T IL V++ G L Sbjct: 8 FVKAMEDYKADFPSFAERGWGATVKAERWNGRHVMFGWLVFWITAYCKGHGLLPDPSVLLDLSQWGP----VASLGDSTPISQQRAIVLVAHIHVLFVSIAAAIAPFSFQDKLLLEPGEADDAPAGLFPPMAPGLTKDAEIWNGRVAMVGLICLVAQAVGTKTPILDVVNMWFGSL 179
BLAST of NO19G02100 vs. NCBI_GenBank
Match: XP_009036814.1 (hypothetical protein AURANDRAFT_25646 [Aureococcus anophagefferens] >EGB08836.1 hypothetical protein AURANDRAFT_25646 [Aureococcus anophagefferens]) HSP 1 Score: 160.6 bits (405), Expect = 5.800e-36 Identity = 89/175 (50.86%), Postives = 107/175 (61.14%), Query Frame = 0 Query: 58 AMADFNGRYPAVAALGLGPSAKAERWNGRHAMFGWIVLLATGYAQAHGLL--PEGGMDAKEWGTWVIVSTTNGEQVTIPAARAAIAIGHLHFGAVGVFAAYSKNSVKDRLLLEPGEKDEAPAGLFPALRPGLTKEAEMLNGRVAMLGLVALVAVSAATGQDILSVIDQGLGGLLL 231 A F +P + G G SAKAERWNGRHAMFGW+ ++ATGY QAHGL+ P +D KEWGT I+S G +TI RA I I ++HF V + AA+ +D LLLE GE DE P GL PA GLT AEM NGR+AMLGLV + A S L+ +D LGG LL Sbjct: 2 ATETFAKDFPIFNSYGWGVSAKAERWNGRHAMFGWVFIVATGYCQAHGLIPNPSQALDFKEWGTLAIISGGKGGGLTITNERACILIANVHFLMVSLCAAWCPLPFQDTLLLEQGEPDEEPTGLIPAFDTGLTPAAEMWNGRLAMLGLVVVSAYSLIYQVPFLTAVDTMLGGTLL 176
BLAST of NO19G02100 vs. NCBI_GenBank
Match: XP_005758550.1 (hypothetical protein EMIHUDRAFT_106967 [Emiliania huxleyi CCMP1516] >EOD06121.1 hypothetical protein EMIHUDRAFT_106967 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 152.5 bits (384), Expect = 1.600e-33 Identity = 86/176 (48.86%), Postives = 106/176 (60.23%), Query Frame = 0 Query: 59 MADFNGRYPAVAALGLGPSAKAERWNGRHAMFGWIVLLATGYAQAHGLLPEG--GMDAKEWGTWVIVSTTNGEQVTIPAARAAIAIGHLHFGAVGVFAAYSKNSVKDRLLLEPGEKDEAPAGLFPALRP--GLTKEAEMLNGRVAMLGLVALVAVSAATGQDILSVIDQGLGGLLL 231 M+ F YP +A G GP+ KAERWNGRHAMFGW+ +L TG A++HG LP G + EWG G I RA I I H+H AV AA+ + D L L GEKDE P GLF L+ GLT AEM NGR+AM+G++A+V SA +G+DIL V+D G GG LL Sbjct: 1 MSQFAADYPWLAKYGFGPTVKAERWNGRHAMFGWLAILGTGVAKSHGWLPSGDVALTYNEWGG----LAQQGFNTYITNERAIIMIAHVHALAVSAAAAFGPQVLGDSLTLLDGEKDEDPYGLFVPLKGTFGLTPAAEMANGRMAMMGIIAVVLTSAISGKDILEVVDIGTGGNLL 172
BLAST of NO19G02100 vs. NCBI_GenBank
Match: GAX20607.1 (hypothetical protein FisN_3Hh542 [Fistulifera solaris]) HSP 1 Score: 148.3 bits (373), Expect = 3.000e-32 Identity = 80/198 (40.40%), Postives = 111/198 (56.06%), Query Frame = 0 Query: 32 TPFDTVSKDELAVENKAMAGKSVFERAMADFNGRYPAVAALGLGPSAKAERWNGRHAMFGWIVLLATGYAQAHGLLP--EGGMDAKEWGTWVIVSTTNGEQVTIPAARAAIAIGHLHFGAVGVFAAYSKNSVKDRLLLEPGEKDEAPAGLFPALRPGLTKEAEMLNGRVAMLGLVALVAVSAATGQDILSVIDQGLGG 228 TP V +++ + +FE A AD+ ++PA A G GPS +AE+WNGRHAMFGW + AT Y + HGL+P E + K+WGT +S N TI RA I + HF V + A + S D L EP G P GLT+EAE+LNGR+AMLGL+ALV +A +D+L ++++ +GG Sbjct: 21 TPSKNVVPKVTSIQGANLGAPEIFEDATADWAKQFPAFAKYGWGPSVQAEKWNGRHAMFGWFFICATAYCKGHGLIPDAESLVSFKDWGTLATISGKN----TITNERAIILAANAHFFGVSLMATFCPPSQGDTLFTEPTVNQPTGYGYMPKFNMGLTQEAEILNGRLAMLGLMALVVATAVEQKDMLDIVNEWVGG 214 The following BLAST results are available for this feature:
BLAST of NO19G02100 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO19G02100 ID=NO19G02100|Name=NO19G02100|organism=Nannochloropsis oceanica|type=gene|length=2064bpback to top protein sequence of NO19G02100.1 >NO19G02100.1-protein ID=NO19G02100.1-protein|Name=NO19G02100.1|organism=Nannochloropsis oceanica|type=polypeptide|length=233bpback to top Synonyms
Publications
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