NO19G02090, NO19G02090 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO19G02090 vs. NCBI_GenBank
Match: EWM23687.1 (Endonuclease/exonuclease/phosphatase [Nannochloropsis gaditana]) HSP 1 Score: 329.3 bits (843), Expect = 1.400e-86 Identity = 183/360 (50.83%), Postives = 224/360 (62.22%), Query Frame = 0 Query: 1 MKRYVGSSHSSSISSVANPSSPDNNMKRAKVGLLSTNFLRVCSYNVDGLDDLNISDRANEVCSILLQEEPDGFLPDVILLQEIVQANFPVFVSRLCSAGYVLAPSSIPEDNDYFTLAFFNGARIQITRSMRTPFSGSNMGRDLIKVEGRL--------ALGAADETPFSSA------SSREFLFMTSHFESLGP--GSTERCRQLTQILDNLLSFPGPALFAGDTNLREGEVKACEQYKKVVDAWMAAGSPAAEKVTWDMSINDNLKMDGASFLPRMRLDRLLLNWKWGGIGTTXXXXXXXXXXXXXXXXXXXXKAAETVKERTELVRQWKLLGKARMADGRFPSDHFGISCLVRLPASG 345 MKRY+ + + + ++ SP K+A+ L +T+FL VCSYNVDGLD + RA EVCSILL+E PD LPDVILLQE+V+AN PVFVSRL +AGY +AP YFTLAFF RI IT ++R PF GS MGRDLIKV+GRL A AA P S + ++ + LFMT+H ESLG S +R QL +L+ L++FPGP LFAGDTNLRE EV+A +YK V+DAW+A GSP TWDM++NDN KM+ A F PRMRLDRLLLN KWG A K+ V+ W+LLG+ RMA+G FPSDHFGISC VRLP G Sbjct: 118 MKRYLTTYPGKTAGASSSRDSPSPGRKKARPTLAATDFLHVCSYNVDGLDSNLLLQRAGEVCSILLEETPDRPLPDVILLQEVVEANLPVFVSRLTAAGYEVAPPPSESLPPYFTLAFFKTCRIHITSAVRMPFPGSRMGRDLIKVQGRLNEPGAGTHAPSAASLNPPSGSGPPALPATVDLLFMTAHLESLGDPLSSEQRSHQLGHVLETLIAFPGPGLFAGDTNLREKEVRAEGRYKLVIDAWVADGSPKTANATWDMTVNDNKKMETAGFKPRMRLDRLLLNGKWG-----------DRVGGQTLEGSKGKGGARREKDGEGRVKGWRLLGRERMAEGVFPSDHFGISCCVRLPPQG 466
BLAST of NO19G02090 vs. NCBI_GenBank
Match: CBJ28153.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 144.1 bits (362), Expect = 8.400e-31 Identity = 89/211 (42.18%), Postives = 111/211 (52.61%), Query Frame = 0 Query: 57 RANEVCSILLQEEPDGFLPDVILLQEIVQANFPVFVSRLCSAG-YVLAPSSIPEDNDYFTLAFFNGARIQITRSMRTPFSGSNMGRDLIKVEGRLALGAADETPFSSASSREFLFMTSHFESLGPGSTERCRQLTQILDNLLSF-PGPALFAGDTNLREGEVKACEQYKKVVDAWMAAGSPAAEKVTWDMSINDNLKMDGASFLPRMRLDR 266 R EVC+ILL+ EP PDVILLQE+ F V +RL G Y P +P + YFTL F + + S R F S MGRDL V ++ + + L MTSH ES S ER Q Q++ LL+F GPA+FAGDTNLRE EVK + K+ D W G+ + TWDM+ NDNL + G F PR R DR Sbjct: 3 RVEEVCAILLESEP---TPDVILLQEVDDEMFAVLNARLGGGGRYRAFPPRVPVEQRYFTLTFVKVGTVTVEESGRKDFPHSLMGRDLSTVR-------------ATFNGKPMLLMTSHLESEKQSSEERKAQFNQVMKQLLAFRGGPAIFAGDTNLREAEVKQEKLAKEAGDMWQLCGADPERRFTWDMANNDNL-VFGGGFQPRARYDR 196
BLAST of NO19G02090 vs. NCBI_GenBank
Match: XP_011672633.1 (PREDICTED: tyrosyl-DNA phosphodiesterase 2 [Strongylocentrotus purpuratus]) HSP 1 Score: 134.8 bits (338), Expect = 5.100e-28 Identity = 99/308 (32.14%), Postives = 140/308 (45.45%), Query Frame = 0 Query: 35 STNFLRVCSYNVDGLDDLNISDRANEVCSILLQEEPDGFLPDVILLQEIVQANFPVFVSRLCSAGYVLAPSSIPEDNDYFTLAFF-NGARIQITRSMRTPFSGSNMGRDLIKVEGRLALGAADETPFSSASSREFLFMTSHFESLGPGSTERCRQLTQILDNL-LSFPGPAL-FAGDTNLREGEVKACEQYKK-VVDAWMAAGSPAAEKVTWDMSINDNLKMDGASFLPRMRLDRLLLNWKWGGIGTTXXXXXXXXXXXXXXXXXXXXKAAETVKERTEL-VRQWKLLGKARMAD-GRFPSDHFGISC 337 +TN R+ S+N+DGLD+ N +R C +++ PDV+ LQE+V + +RL S + A +SI Y+T N + IT S+ PFS + MGR+L L + A + + S M +H ES GP + ER Q Q L + + P + F GDTNLR+ EV + + +VD W A G+ K TWD + NDNL SF P++R DRL G T L + +KL+GK R+ RFPSDH+GI C Sbjct: 11 NTNIFRLMSWNIDGLDERNAEERTGAACDTIMK-----LAPDVVFLQEVVPTTHTLLKARLSSKYTIHAANSI----GYYTCTLVKNSSESCITTSLVQPFSNTKMGRNL------LIVNACYKNIYLS-------LMNTHLESTGPATAERLLQFQQALGEMQIQDPDRVVFFGGDTNLRDKEVASMRGLPQGIVDQWEACGADKKTKFTWDTTTNDNLDWQSGSFKPKLRFDRLFQRPAAG--------------------------------HATNLSISSFKLIGKERLPGCQRFPSDHYGIVC 264
BLAST of NO19G02090 vs. NCBI_GenBank
Match: XP_002732161.1 (PREDICTED: tyrosyl-DNA phosphodiesterase 2-like [Saccoglossus kowalevskii]) HSP 1 Score: 130.2 bits (326), Expect = 1.300e-26 Identity = 101/344 (29.36%), Postives = 150/344 (43.60%), Query Frame = 0 Query: 8 SHSSSISSVANPSSP------------DNNMKRAKVGLLSTNFLRVCSYNVDGLDDLNISDRANEVCSILLQEEPDGFLPDVILLQEIVQANFPVFVSRLCSAGYVLAPSSIPEDNDYFTLAFFNGARIQITRSMRTPFSGSNMGRDLIKVEGRLALGAADETPFSSASSREFLFMTSHFESLGPGSTERCRQLTQILDNLLSFPG--PALFAGDTNLREGEVKACEQY-KKVVDAWMAAGSPAAEKVTWDMSINDNLKMDGASFLPRMRLDRLLLNWKWGGIGTTXXXXXXXXXXXXXXXXXXXXKAAETVKERTELVRQWKLLGKARMADGRFPSDHFGISC 337 SHS S S + SSP D+N+ L+ L++ ++N+DGLD+ NI++R VCSI+ +E PDV+ LQE++ F ++ +CS Y+ P++ YFT +RI + F + M R+L+ V+ R + L MTSH ES+ S ER QLT +L ++ +F GDTNLR+ E+ + D W GSP + +WD++ NDNL M F P+ R DRL L G + L + + +G R+ GRF SDH+GI C Sbjct: 64 SHSMSPSGSSGNSSPDLVVTYDSGAPADSNLGNQTCSLM----LKLLTWNIDGLDNKNITERTKTVCSIIKRES-----PDVVYLQEVIVETF-AYIETMCSPTYIAIPAN---SEQYFTTILLRKSRISLLAHKIIEFPTTKMYRNLLTVKARF-------------RDIDLLLMTSHMESMKNHSHERKTQLTTVLKHMSEADAATAVIFGGDTNLRDYEITQIGGLPDSIGDVWQMCGSPEDAQFSWDITKNDNLDM---PFKPKCRFDRLFLR---QGCSSKL------------------------------LPQMFMFVGTERLPCGRFASDHWGILC 345
BLAST of NO19G02090 vs. NCBI_GenBank
Match: XP_004043391.1 (PREDICTED: tyrosyl-DNA phosphodiesterase 2 [Gorilla gorilla gorilla]) HSP 1 Score: 124.4 bits (311), Expect = 6.900e-25 Identity = 98/338 (28.99%), Postives = 145/338 (42.90%), Query Frame = 0 Query: 2 KRYVGSSHSSSISSVANPSSPDNNMKRAKVGLLSTNFLRVCSYNVDGLDDLNISDRANEVCSILLQEEPDGFLPDVILLQEIVQANFPVFVSRLCSAGYVLAPSSIPEDNDYFTLAFFNGARIQITRSMRTPFSGSNMGRDLIKVEGRLALGAADETPFSSASSREFLFMTSHFESLGPGSTERCRQLTQILDNLLSFPGPA--LFAGDTNLREGEVKACEQY-KKVVDAWMAAGSPAAEKVTWDMSINDNLKMDGASFLPRMRLDRLLLNWKWGGIGTTXXXXXXXXXXXXXXXXXXXXKAAETVKERTELVRQWKLLGKARMADGRFPSDHFGISC 337 K YV ++ + S + SP + ++ + S + ++N+DGLD N+S+RA VCS L + PDVI LQE++ + R S+ Y + + YFT +R+++ PF + M R+L+ V + S E MTSH ES + ER QL +L + P A +FAGDTNLR+ EV C +VD W G P + TWD +N NL + A ++R DR+ AAE E + R +LLG ++ GRFPSDH+G+ C Sbjct: 112 KTYVDLTNEETTDSTTSKISPSEDTQQENGSMFS-----LITWNIDGLDLNNLSERARGVCSYLAL-----YSPDVIFLQEVIPPYYSYLKKR--SSNYEIITG---HEEGYFTAIMLKKSRVKLKSQEIIPFPSTKMMRNLLCVH-------------VNVSGNELCLMTSHLESTRGHAAERMNQLKMVLKKMQEAPESATVIFAGDTNLRDREVTRCGGLPNNIVDVWEFLGKPKHCQYTWDTQMNSNLGITAAC---KLRFDRIFFR-----------------------------AAAE---EGHIIPRSLELLGLEKLDCGRFPSDHWGLLC 386
BLAST of NO19G02090 vs. NCBI_GenBank
Match: EAW55458.1 (TRAF and TNF receptor associated protein, isoform CRA_a [Homo sapiens]) HSP 1 Score: 123.6 bits (309), Expect = 1.200e-24 Identity = 98/338 (28.99%), Postives = 144/338 (42.60%), Query Frame = 0 Query: 2 KRYVGSSHSSSISSVANPSSPDNNMKRAKVGLLSTNFLRVCSYNVDGLDDLNISDRANEVCSILLQEEPDGFLPDVILLQEIVQANFPVFVSRLCSAGYVLAPSSIPEDNDYFTLAFFNGARIQITRSMRTPFSGSNMGRDLIKVEGRLALGAADETPFSSASSREFLFMTSHFESLGPGSTERCRQLTQILDNLLSFPGPA--LFAGDTNLREGEVKACEQY-KKVVDAWMAAGSPAAEKVTWDMSINDNLKMDGASFLPRMRLDRLLLNWKWGGIGTTXXXXXXXXXXXXXXXXXXXXKAAETVKERTELVRQWKLLGKARMADGRFPSDHFGISC 337 K YV ++ + S + SP + ++ + S + ++N+DGLD N+S+RA VCS L + PDVI LQE++ + R S+ Y + + YFT +R+++ PF + M R+L+ V + S E MTSH ES + ER QL +L + P A +FAGDTNLR+ EV C +VD W G P + TWD +N NL + A ++R DR+ AAE E + R LLG ++ GRFPSDH+G+ C Sbjct: 112 KTYVDLTNEETTDSTTSKISPSEDTQQENGSMFS-----LITWNIDGLDLNNLSERARGVCSYLAL-----YSPDVIFLQEVIPPYYSYLKKR--SSNYEIITG---HEEGYFTAIMLKKSRVKLKSQEIIPFPSTKMMRNLLCVH-------------VNVSGNELCLMTSHLESTRGHAAERMNQLKMVLKKMQEAPESATVIFAGDTNLRDREVTRCGGLPNNIVDVWEFLGKPKHCQYTWDTQMNSNLGITAAC---KLRFDRIFFR-----------------------------AAAE---EGHIIPRSLDLLGLEKLDCGRFPSDHWGLLC 386
BLAST of NO19G02090 vs. NCBI_GenBank
Match: XP_518271.3 (tyrosyl-DNA phosphodiesterase 2 [Pan troglodytes] >XP_003823247.1 PREDICTED: tyrosyl-DNA phosphodiesterase 2 [Pan paniscus]) HSP 1 Score: 123.6 bits (309), Expect = 1.200e-24 Identity = 98/338 (28.99%), Postives = 144/338 (42.60%), Query Frame = 0 Query: 2 KRYVGSSHSSSISSVANPSSPDNNMKRAKVGLLSTNFLRVCSYNVDGLDDLNISDRANEVCSILLQEEPDGFLPDVILLQEIVQANFPVFVSRLCSAGYVLAPSSIPEDNDYFTLAFFNGARIQITRSMRTPFSGSNMGRDLIKVEGRLALGAADETPFSSASSREFLFMTSHFESLGPGSTERCRQLTQILDNLLSFPGPA--LFAGDTNLREGEVKACEQY-KKVVDAWMAAGSPAAEKVTWDMSINDNLKMDGASFLPRMRLDRLLLNWKWGGIGTTXXXXXXXXXXXXXXXXXXXXKAAETVKERTELVRQWKLLGKARMADGRFPSDHFGISC 337 K YV ++ + S + SP + ++ + S + ++N+DGLD N+S+RA VCS L + PDVI LQE++ + R S+ Y + + YFT +R+++ PF + M R+L+ V + S E MTSH ES + ER QL +L + P A +FAGDTNLR+ EV C +VD W G P + TWD +N NL + A ++R DR+ AAE E + R LLG ++ GRFPSDH+G+ C Sbjct: 112 KTYVDLTNEETTDSTTSKISPSEDTQQENGSMFS-----LITWNIDGLDLNNLSERARGVCSYLAL-----YSPDVIFLQEVIPPYYSYLKKR--SSNYEIITG---HEEGYFTAIMLKKSRVKLKSQEIIPFPSTKMMRNLLCVH-------------VNVSGNELCLMTSHLESTRGHAVERMNQLKMVLKKMQEAPESATVIFAGDTNLRDREVTRCGGLPNNIVDVWEFLGKPKHCQYTWDTQMNSNLGITAAC---KLRFDRIFFR-----------------------------AAAE---EGHIIPRSLDLLGLEKLDCGRFPSDHWGLLC 386
BLAST of NO19G02090 vs. NCBI_GenBank
Match: BAA92119.1 (unnamed protein product [Homo sapiens]) HSP 1 Score: 123.6 bits (309), Expect = 1.200e-24 Identity = 98/338 (28.99%), Postives = 144/338 (42.60%), Query Frame = 0 Query: 2 KRYVGSSHSSSISSVANPSSPDNNMKRAKVGLLSTNFLRVCSYNVDGLDDLNISDRANEVCSILLQEEPDGFLPDVILLQEIVQANFPVFVSRLCSAGYVLAPSSIPEDNDYFTLAFFNGARIQITRSMRTPFSGSNMGRDLIKVEGRLALGAADETPFSSASSREFLFMTSHFESLGPGSTERCRQLTQILDNLLSFPGPA--LFAGDTNLREGEVKACEQY-KKVVDAWMAAGSPAAEKVTWDMSINDNLKMDGASFLPRMRLDRLLLNWKWGGIGTTXXXXXXXXXXXXXXXXXXXXKAAETVKERTELVRQWKLLGKARMADGRFPSDHFGISC 337 K YV ++ + S + SP + ++ + S + ++N+DGLD N+S+RA VCS L + PDVI LQE++ + R S+ Y + + YFT +R+++ PF + M R+L+ V + S E MTSH ES + ER QL +L + P A +FAGDTNLR+ EV C +VD W G P + TWD +N NL + A ++R DR+ AAE E + R LLG ++ GRFPSDH+G+ C Sbjct: 82 KTYVDLTNEETTDSTTSKISPSEDTQQENGSMFS-----LITWNIDGLDLNNLSERARGVCSYLAL-----YSPDVIFLQEVIPPYYSYLKKR--SSNYEIITG---HEEGYFTAIMLKKSRVKLKSQEIIPFPSTKMMRNLLCVH-------------VNVSGNELCLMTSHLESTRGHAAERMNQLKMVLKKMQEAPESATVIFAGDTNLRDREVTRCGGLPNNIVDVWEFLGKPKHCQYTWDTQMNSNLGITAAC---KLRFDRIFFR-----------------------------AAAE---EGHIIPRSLDLLGLEKLDCGRFPSDHWGLLC 356
BLAST of NO19G02090 vs. NCBI_GenBank
Match: NP_057698.2 (tyrosyl-DNA phosphodiesterase 2 [Homo sapiens] >O95551.1 RecName: Full=Tyrosyl-DNA phosphodiesterase 2; Short=Tyr-DNA phosphodiesterase 2; Short=hTDP2; AltName: Full=5'-tyrosyl-DNA phosphodiesterase; Short=5'-Tyr-DNA phosphodiesterase; AltName: Full=ETS1-associated protein 2; AltName: Full=ETS1-associated protein II; Short=EAPII; AltName: Full=TRAF and TNF receptor-associated protein; AltName: Full=Tyrosyl-RNA phosphodiesterase; AltName: Full=VPg unlinkase >AAG35600.1 ETS1-associated protein 2 [Homo sapiens] >CAB92966.1 TRAF and TNF receptor associated protein [Homo sapiens] >AAH17553.1 TRAF and TNF receptor associated protein [Homo sapiens] >AAT09764.1 TRAF and TNF receptor associated protein [Homo sapiens] >AAI10376.1 TRAF and TNF receptor associated protein [Homo sapiens] >ABZ92143.1 TRAF and TNF receptor associated protein, partial [synthetic construct] >BAJ17780.1 TRAF and TNF receptor associated protein, partial [synthetic construct]) HSP 1 Score: 123.6 bits (309), Expect = 1.200e-24 Identity = 98/338 (28.99%), Postives = 144/338 (42.60%), Query Frame = 0 Query: 2 KRYVGSSHSSSISSVANPSSPDNNMKRAKVGLLSTNFLRVCSYNVDGLDDLNISDRANEVCSILLQEEPDGFLPDVILLQEIVQANFPVFVSRLCSAGYVLAPSSIPEDNDYFTLAFFNGARIQITRSMRTPFSGSNMGRDLIKVEGRLALGAADETPFSSASSREFLFMTSHFESLGPGSTERCRQLTQILDNLLSFPGPA--LFAGDTNLREGEVKACEQY-KKVVDAWMAAGSPAAEKVTWDMSINDNLKMDGASFLPRMRLDRLLLNWKWGGIGTTXXXXXXXXXXXXXXXXXXXXKAAETVKERTELVRQWKLLGKARMADGRFPSDHFGISC 337 K YV ++ + S + SP + ++ + S + ++N+DGLD N+S+RA VCS L + PDVI LQE++ + R S+ Y + + YFT +R+++ PF + M R+L+ V + S E MTSH ES + ER QL +L + P A +FAGDTNLR+ EV C +VD W G P + TWD +N NL + A ++R DR+ AAE E + R LLG ++ GRFPSDH+G+ C Sbjct: 82 KTYVDLTNEETTDSTTSKISPSEDTQQENGSMFS-----LITWNIDGLDLNNLSERARGVCSYLAL-----YSPDVIFLQEVIPPYYSYLKKR--SSNYEIITG---HEEGYFTAIMLKKSRVKLKSQEIIPFPSTKMMRNLLCVH-------------VNVSGNELCLMTSHLESTRGHAAERMNQLKMVLKKMQEAPESATVIFAGDTNLRDREVTRCGGLPNNIVDVWEFLGKPKHCQYTWDTQMNSNLGITAAC---KLRFDRIFFR-----------------------------AAAE---EGHIIPRSLDLLGLEKLDCGRFPSDHWGLLC 356
BLAST of NO19G02090 vs. NCBI_GenBank
Match: BAG60857.1 (unnamed protein product [Homo sapiens]) HSP 1 Score: 123.6 bits (309), Expect = 1.200e-24 Identity = 98/338 (28.99%), Postives = 144/338 (42.60%), Query Frame = 0 Query: 2 KRYVGSSHSSSISSVANPSSPDNNMKRAKVGLLSTNFLRVCSYNVDGLDDLNISDRANEVCSILLQEEPDGFLPDVILLQEIVQANFPVFVSRLCSAGYVLAPSSIPEDNDYFTLAFFNGARIQITRSMRTPFSGSNMGRDLIKVEGRLALGAADETPFSSASSREFLFMTSHFESLGPGSTERCRQLTQILDNLLSFPGPA--LFAGDTNLREGEVKACEQY-KKVVDAWMAAGSPAAEKVTWDMSINDNLKMDGASFLPRMRLDRLLLNWKWGGIGTTXXXXXXXXXXXXXXXXXXXXKAAETVKERTELVRQWKLLGKARMADGRFPSDHFGISC 337 K YV ++ + S + SP + ++ + S + ++N+DGLD N+S+RA VCS L + PDVI LQE++ + R S+ Y + + YFT +R+++ PF + M R+L+ V + S E MTSH ES + ER QL +L + P A +FAGDTNLR+ EV C +VD W G P + TWD +N NL + A ++R DR+ AAE E + R LLG ++ GRFPSDH+G+ C Sbjct: 112 KTYVDLTNEETTDSTTSKISPSEDTQQENGSMFS-----LITWNIDGLDLNNLSERARGVCSYLAL-----YSPDVIFLQEVIPPYYSYLKKR--SSNYEIITG---HEEGYFTAIMLKKSRVKLKSQEIIPFPSTKMMRNLLCVH-------------VNVSGNELCLMTSHLESTRGHAAERMNQLKMVLKKMQEAPESATVIFAGDTNLRDREVTRCGGLPNNIVDVWEFLGKPKHCQYTWDTQMNSNLGITAAC---KLRFDRIFFR-----------------------------AAAE---EGHIIPRSLDLLGLEKLDCGRFPSDHWGLLC 386 The following BLAST results are available for this feature:
BLAST of NO19G02090 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO19G02090 ID=NO19G02090|Name=NO19G02090|organism=Nannochloropsis oceanica|type=gene|length=1788bpback to top protein sequence of NO19G02090.1 >NO19G02090.1-protein ID=NO19G02090.1-protein|Name=NO19G02090.1|organism=Nannochloropsis oceanica|type=polypeptide|length=346bpback to top Synonyms
Publications
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