NO19G01990, NO19G01990 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO19G01990 vs. NCBI_GenBank
Match: XP_002903598.1 (conserved hypothetical protein [Phytophthora infestans T30-4] >EEY55374.1 conserved hypothetical protein [Phytophthora infestans T30-4]) HSP 1 Score: 85.1 bits (209), Expect = 5.600e-13 Identity = 77/344 (22.38%), Postives = 124/344 (36.05%), Query Frame = 0 Query: 58 TKVPLSLKSVVALIRTLEGRDKVTKTIQYACRFLWWYHKNHMPTDESRGSRFEKMFRASQTARKCFHLFRTFEELEKLQALSSDTKTPQWRRRLMMLRAAAMAVYWFYDNTCFFIIVKLSTFDQRTAIARDGAAWSLANLISVGLALYDLDQNSKDRRRLEDKTVALLKARAGAGRTSTGISPTHSVAAGSAAEGEIVGEGXXXXXXXXXXXXXXXXIWSSGASNRSLVNGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQGGDTVADIDVEEVLEEMARANVKRFDLVGDMLRASCDFVVACNSPGFDLPLRLLGYRLHDGVIGTAGLISAISAVYKAYPS 402 TK PLSL + + L LEGRDK++K +QY R L +Y + P + G R +++ Q +RK F L ++ +KLQ LS + +R L ++ M Y+ DN F K+ D R G W AN+ AL L+ + + + + D +L + R T + ++ +G RF + +L+ +CD +V+ N+ G L R+ G +LHDG+IG+ G +SA +Y +PS Sbjct: 3 TKAPLSLDAFIKLAFCLEGRDKLSKMLQYGSRALAFYVLSADPKSDV-GQRLHALYKVMQQSRKAFRLGKSVTYYKKLQTLSGSKSLTETQRYLQFIQNLGMLGYFLADNAAFASKAKVLRLDADDLAQRGGVMWFCANVAGFFNALESLNADVEKEKCVRD----ILASEEDTARVETLQNQLETLRSG------------------------------------------------------------------------------------------------RFKKLLAVLKVTCDLIVSSNTSGVRLAERITGTKLHDGIIGSVGCVSAAVVLYNTWPS 245
BLAST of NO19G01990 vs. NCBI_GenBank
Match: XP_009535899.1 (hypothetical protein PHYSODRAFT_549873 [Phytophthora sojae] >EGZ09266.1 hypothetical protein PHYSODRAFT_549873 [Phytophthora sojae]) HSP 1 Score: 84.7 bits (208), Expect = 7.300e-13 Identity = 78/344 (22.67%), Postives = 127/344 (36.92%), Query Frame = 0 Query: 58 TKVPLSLKSVVALIRTLEGRDKVTKTIQYACRFLWWYHKNHMPTDESRGSRFEKMFRASQTARKCFHLFRTFEELEKLQALSSDTKTPQWRRRLMMLRAAAMAVYWFYDNTCFFIIVKLSTFDQRTAIARDGAAWSLANLISVGLALYDLDQNSKDRRRLEDKTVALLKARAGAGRTSTGISPTHSVAAGSAAEGEIVGEGXXXXXXXXXXXXXXXXIWSSGASNRSLVNGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQGGDTVADIDVEEVLEEMARANVKRFDLVGDMLRASCDFVVACNSPGFDLPLRLLGYRLHDGVIGTAGLISAISAVYKAYPS 402 TK P+SL + + L LEGRDK++K +QY R L +Y + P + G R +++ Q +RK F L ++ +KLQALS + + + L ++ M Y+ DN F K+ FD + G W AN+ A+ L+ + + + + D +L + A R +D + E R+ RF + +L+ +CD VV+ N+ G L R+ G +LHDG+IG+ G +SA +Y +PS Sbjct: 3 TKAPVSLDAFIKLAFCLEGRDKLSKMLQYGSRALAFYILSADPKSDV-GQRLHALYKVMQQSRKAFRLGKSVTYYKKLQALSGNKSLSEGQSYLQFVQNVGMLGYFISDNVAFASKAKVLRFDAEELSKKGGILWFCANVAGFFNAVESLNADVEKEKCVRD----ILASEEDAAR----------------------------------------------------------------------------------------------VDALQTQLEALRSG--RFKKLLAVLKVTCDLVVSSNTGGVRLAERITGTKLHDGIIGSVGCVSAAVVLYNTWPS 245
BLAST of NO19G01990 vs. NCBI_GenBank
Match: XP_001014394.2 (peroxisomal biogenesis factor 11 [Tetrahymena thermophila SB210] >EAR94149.2 peroxisomal biogenesis factor 11 [Tetrahymena thermophila SB210]) HSP 1 Score: 83.6 bits (205), Expect = 1.600e-12 Identity = 47/154 (30.52%), Postives = 77/154 (50.00%), Query Frame = 0 Query: 64 LKSVVALIRTLEGRDKVTKTIQYACRFLWWYHKNHMPTDESRGSRFEKMFRASQTARKCFHLFRTFEELEKLQALSSDTKTPQWRRRLMMLRAAAMAVYWFYDNTCFFIIVKLSTFDQRTAIARDGAAWSLANLISVGLALYDLDQNSKDRRRL 218 + +A I EGRDK K IQYA RFL W+ N ++ +RF +F + ARK F LF+T E++K+Q L + + + L +L A +YW++DN VK D + + W +A L+S+ + +L ++ ++ L Sbjct: 1 MNRTIAWINKTEGRDKFCKAIQYASRFLKWHFTN--TENKELAARFNGLFNGMKDARKLFRLFKTINEIQKIQELLNKKDNDEINKALNILVRAFFGLYWYFDNLVILKSVKFIHGDPKPDNKKGSTCWLIALLLSIAQNIRNLLKSLQEEANL 152
BLAST of NO19G01990 vs. NCBI_GenBank
Match: KRX05614.1 (hypothetical protein PPERSA_09754 [Pseudocohnilembus persalinus]) HSP 1 Score: 80.1 bits (196), Expect = 1.800e-11 Identity = 47/155 (30.32%), Postives = 75/155 (48.39%), Query Frame = 0 Query: 64 LKSVVALIRTLEGRDKVTKTIQYACRFLWWYHKNHMPTDESRGSRFEKMFRASQTARKCFHLFRTFEELEKLQALSSDTKTPQWRRRLMMLRAAAMAVYWFYDNTCFFIIVKLSTFDQRTAIARDGAAWSLANLISVGLALYDLDQNSKDRRRLE 219 L V+ ++ +GRDK+ K IQ C++L WY+ + ++ R + + ARK F LF++ E+EKL LS ++ L +L A A YWF+DN I VK ++ A W L + ALY ++QN + +L+ Sbjct: 11 LTKVIGILNKTDGRDKLGKAIQNLCKYLNWYYSTN---NKDLADRMIGLSNGMRDARKLFRLFKSMNEIEKLIQLSQTDSPDVVKKALDVLARAFFAGYWFFDNLVILITVKFLKSNKEKATQTSNTFWFFGILFTQIQALYQINQNMQSLVQLK 162
BLAST of NO19G01990 vs. NCBI_GenBank
Match: OQR84945.1 (hypothetical protein ACHHYP_12513 [Achlya hypogyna]) HSP 1 Score: 79.0 bits (193), Expect = 4.000e-11 Identity = 75/332 (22.59%), Postives = 124/332 (37.35%), Query Frame = 0 Query: 66 SVVALIRTLEGRDKVTKTIQYACRFLWWYHKNHMPTDESRGSRFEKMFRASQTARKCFHLFRTFEELEKLQALSSDTK-TPQWRRRLMMLRAAAMAVYWFYDNTCFFIIVKLSTFDQRTAIARDGAAWSLANLISVGLALYDLDQNSKDRRRLEDKTVALLKARAGAGRTSTGISPTHSVAAGSAAEGEIVGEGXXXXXXXXXXXXXXXXIWSSGASNRSLVNGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQGGDTVADIDVEEVLEEMARANVKRFDLVGDMLRASCDFVVACNSPGFDLPLRLLGYRLHDGVIGTAGLISAISAVY 397 +++ L LEGRDK+TK QY+ R L ++ P G + +F+ASQ ARK F + ++F K+ A + K ++R L +++ M ++ +DN FF K+ D A R G W AN+ LA Y+ + D+ + H+ A A+G + E A+N +L E+ R+ +L+ +CD +V+ N+ G LP R+LG +L+DG++G G +SA +Y Sbjct: 4 TLLKLSNDLEGRDKLTKLCQYSTRALAYWILTADP-KSPLGQQLSALFKASQAARKAFRVGKSFNYPAKITATLENKKGLVPYQRNLQLVQDIGMGTFFVFDNAAFFGASKVLNVDAGEAAKRGGYFWFCANVAGFILA-YEALKTETDKE-----------------------TELHNALAAGTADGSLTPE---------------------AATN--------------------------------------------------LLSEIDATQTARWKKTLALLKTTCDLIVSSNTAGVRLPERILGSKLNDGIVGVVGCVSASVVLY 239
BLAST of NO19G01990 vs. NCBI_GenBank
Match: XP_024572108.1 (peroxisomal biogenesis factor 11 domain-containing protein [Plasmopara halstedii] >CEG35739.1 peroxisomal biogenesis factor 11 domain-containing protein [Plasmopara halstedii]) HSP 1 Score: 77.0 bits (188), Expect = 1.500e-10 Identity = 71/340 (20.88%), Postives = 124/340 (36.47%), Query Frame = 0 Query: 62 LSLKSVVALIRTLEGRDKVTKTIQYACRFLWWYHKNHMPTDESRGSRFEKMFRASQTARKCFHLFRTFEELEKLQALSSDTKTPQWRRRLMMLRAAAMAVYWFYDNTCFFIIVKLSTFDQRTAIARDGAAWSLANLISVGLALYDLDQNSKDRRRLEDKTVALLKARAGAGRTSTGISPTHSVAAGSAAEGEIVGEGXXXXXXXXXXXXXXXXIWSSGASNRSLVNGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQGGDTVADIDVEEVLEEMARANVKRFDLVGDMLRASCDFVVACNSPGFDLPLRLLGYRLHDGVIGTAGLISAISAVYKAYPS 402 ++L + + L +LEGRDK++K +QY R L +Y + P + G R +++ Q +RK F L ++ +KLQ LS + + +R L ++ M Y+ DN F K+ FD R G W AN+ AL L+ + + + + D +L + + R +E + ++ RF +L+ +CD +V+ N+ G L R+ G +LHDG+IG+ G +SA +Y ++P+ Sbjct: 1 MNLDAFITLAFSLEGRDKLSKILQYGSRALAFYILSADPKSDV-GQRLHALYQVMQQSRKAFRLGKSITYYKKLQILSCNKSLNETQRYLQFVQNFGMLGYFLTDNVAFASKAKVLRFDANEVARRGGIMWFTANIAGFYNALDSLNADMEKEKCVRD----ILISEEDSAR------------------------------------------------------------------------------------------------IEMLQNQLETIQKDRFKKWLAVLKVTCDLIVSSNTSGVRLAERITGTKLHDGIIGSLGCVSAAIVLYTSWPT 239
BLAST of NO19G01990 vs. NCBI_GenBank
Match: OQR95375.1 (hypothetical protein THRCLA_07924 [Thraustotheca clavata]) HSP 1 Score: 76.6 bits (187), Expect = 2.000e-10 Identity = 71/330 (21.52%), Postives = 121/330 (36.67%), Query Frame = 0 Query: 67 VVALIRTLEGRDKVTKTIQYACRFLWWYHKNHMPTDESRGSRFEKMFRASQTARKCFHLFRTFEELEKLQALSSDTKTPQWRRRLMMLRAAAMAVYWFYDNTCFFIIVKLSTFDQRTAIARDGAAWSLANLISVGLALYDLDQNSKDRRRLEDKTVALLKARAGAGRTSTGISPTHSVAAGSAAEGEIVGEGXXXXXXXXXXXXXXXXIWSSGASNRSLVNGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQGGDTVADIDVEEVLEEMARANVKRFDLVGDMLRASCDFVVACNSPGFDLPLRLLGYRLHDGVIGTAGLISAISAVY 397 +V L LEGRDK+TK QYA R L ++ P G + +F+A Q+ARK F + ++F K+ A + K +++ L +++ M ++ +DN FF K+ D A+ G W AN+ + L L + + +L H + AE T++ +++L+++ R+ +L+ +CD +V+ N+ G LP R+LG +L+DG+IG G ISA +Y Sbjct: 4 LVTLSNDLEGRDKLTKWTQYASRALAYWVLTADPKSPV-GQQLTALFKAVQSARKAFRVGKSFNYPAKITATIDNQKLDPFQKNLQLIQDLGMMTFFAFDNAAFFGSAKVLPIDSAQAMKNGGYFWFCANIAAFILNFQALQKEADKEAKL------------------------HQILETKKAE-----------------------------------------------------------------------MTLSSETADDLLKQIDAVQSARWKKSLAVLKTTCDLIVSSNTAGVRLPERILGKKLNDGIIGIVGCISASVVLY 237
BLAST of NO19G01990 vs. NCBI_GenBank
Match: XP_001431233.1 (hypothetical protein [Paramecium tetraurelia strain d4-2] >CAK63835.1 unnamed protein product [Paramecium tetraurelia]) HSP 1 Score: 75.9 bits (185), Expect = 3.400e-10 Identity = 44/136 (32.35%), Postives = 72/136 (52.94%), Query Frame = 0 Query: 63 SLKSVVALIRTLEGRDKVTKTIQYACRFLWWYHKNHMPTDESRGSRFEKMFRASQTARKCFHLFRTFEELEK-LQALSSDTKTPQWR--RRLMMLRAAAMAVYWFYDNTCFFIIVKLSTFDQRTAIARDGAAWSLA 196 +L S V EGRDK+ K +QY RFL W+ K + +E ++F+ +F++++ ARK F L ++ EL+ + + + KTPQ + R L +L +YWFYDN +K +T D + + W +A Sbjct: 3 TLDSTVKWFNKTEGRDKICKVMQYGSRFLMWHLKTN-SGNEQLSNQFKNLFQSTRDARKLFRLAKSLNELQTIIDKVGQNCKTPQEQVARALNILTRVWFLLYWFYDNLSVLSTIKFTTSDPKPLQKKAMTFWFIA 137
BLAST of NO19G01990 vs. NCBI_GenBank
Match: CDW91201.1 (peroxisomal biogenesis factor 11 domain-containing protein [Stylonychia lemnae]) HSP 1 Score: 73.2 bits (178), Expect = 2.200e-9 Identity = 49/169 (28.99%), Postives = 80/169 (47.34%), Query Frame = 0 Query: 65 KSVVALIRTLEGRDKVTKTIQYACRFLWWYHKNHMPTDESRGSRFEKMFRASQTARKCFHLFRTFEELEKLQALSSDTKTPQWRRRLMMLRAAAMAVYWFYDNTCFFIIVK-LSTFDQRTAIARDGAAWSLANLISVGLALYDLDQNSKDRRRLEDKTVALLKARAGAG 233 +S LI TLEGRDK K IQYA R + + ++ ++F+ +F + ARK F LF++ E +K+ + K PQ ++ L +L YW +DN +K L D+ A R W L L ++ L L + + ++ + L ++ +L AG Sbjct: 14 QSQFILILTLEGRDKFCKAIQYASRIIKFQQTG---KNDKLAAKFQGLFEGMRDARKLFRLFKSIVEYQKITQIQKQ-KLPQHKKALQILARLGFLFYWVFDNLQILAKIKYLEGVDKEQAGKRAATFWLLGLLFTLALTLISIYEAHQEEQALRAQSKSLSAEERAAG 178
BLAST of NO19G01990 vs. NCBI_GenBank
Match: XP_004036930.1 (hypothetical protein IMG5_066000 [Ichthyophthirius multifiliis] >EGR32944.1 hypothetical protein IMG5_066000 [Ichthyophthirius multifiliis]) HSP 1 Score: 72.0 bits (175), Expect = 4.900e-9 Identity = 43/131 (32.82%), Postives = 60/131 (45.80%), Query Frame = 0 Query: 70 LIRTLEGRDKVTKTIQYACRFLWWYHKNHMPTDESRGSRFEKMFRASQTARKCFHLFRTFEELEKLQALSSDTKTPQWRRRLMMLRAAAMAVYWFYDNTCFFIIVKLSTFDQRTAIARDGAAWSLANLISV 201 +I L+GRDK K IQY RFL W+ N D S RF +F + ARK F LF+T E K+ L + L +L+ A ++WF+DN +K D + W LA + +V Sbjct: 1 MISKLQGRDKFCKAIQYGSRFLKWHFTNTGNKDMS--ERFNGLFGGMRDARKLFRLFKTINECHKIMELLKKKDDDDLNKTLAILQRAFFGMFWFFDNLVILKQLKFLKGDHKPNSKTGSTFWFLALICAV 129 The following BLAST results are available for this feature:
BLAST of NO19G01990 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO19G01990 ID=NO19G01990|Name=NO19G01990|organism=Nannochloropsis oceanica|type=gene|length=2145bpback to top protein sequence of NO19G01990.1 >NO19G01990.1-protein ID=NO19G01990.1-protein|Name=NO19G01990.1|organism=Nannochloropsis oceanica|type=polypeptide|length=420bpback to top Synonyms
Publications
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