NO19G01970, NO19G01970 (gene) Nannochloropsis oceanica

Overview
NameNO19G01970
Unique NameNO19G01970
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1971
Alignment locationchr19:575363..577333 -

Link to JBrowse

Properties
Property NameValue
DescriptionAaa-type atpase family protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr19genomechr19:575363..577333 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005524ATP binding
GO:0005524ATP binding
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
IPR003959ATPase_AAA_core
IPR003593AAA+_ATPase
Homology
[Close]
BLAST of NO19G01970 vs. NCBI_GenBank
Match: GAX99319.1 (ATPase, partial [Pythium insidiosum])

HSP 1 Score: 320.5 bits (820), Expect = 1.200e-83
Identity = 161/288 (55.90%), Postives = 214/288 (74.31%), Query Frame = 0 
Query:  357 GGIGSGQNGTAVMGENDPVSRLKKLGAEVFEKA-TEEELDWTCLAGYESIKAEVEDTVVMALQHAEAYDAIARQTRERYESNRPRAVLFEGPPGTGKTLTARIIASRTEVPLVFISTERVLSKWYGDSEKNLAKVFEACKELGGAIIFIDEVDALAASR-DTNMHEATRRLLSVILQSIEGFRGRNKNVLICATNRKQDLDSALLSRFDVSIKFDLPTCPARQAIFARYAKHLAGNELARLAEASEAYSCRDIKEVCENTERKWASKTIRGQADGLTPPLKEYLNQLK 643
            G  GS  NG  V  +++ + +L+ LG +VFE + +E+ L+W  LAGY+ +K E+EDTVV+ALQ+ + YD IAR+TR RYESNRPRAVLFEGPPGTGKTL+ARIIA +  +P++ I  E V+SKWYGDSEK ++ +F+AC++  GAIIFIDE+DALA  R    MHEA+RR+LSV+LQ +EGF    K  +ICATNRKQDLDSAL+SRFD+ I++DLP    R+A+FARYAK L  ++L++LA  S   SCRDIKE+CE  ERKWASK ++ +     P ++ Y +  K
Sbjct:  283 GQRGSTSNG-PVGSKDEAIQQLQSLGIDVFEPSDSEDSLNWDSLAGYDDVKLEIEDTVVLALQNPDLYDQIARKTRCRYESNRPRAVLFEGPPGTGKTLSARIIAQQAGIPMIHIPIESVVSKWYGDSEKKMSAIFDACEKFDGAIIFIDEIDALAGDRAGGTMHEASRRILSVLLQKVEGFASAKKTTVICATNRKQDLDSALISRFDLCIRYDLPNEATRKAVFARYAKQLTRDDLSQLAAISGGLSCRDIKEICEYAERKWASKVLKKEVTEELPSVQAYADATK 569
[Close]
BLAST of NO19G01970 vs. NCBI_GenBank
Match: GAX94803.1 (ATPase, partial [Pythium insidiosum])

HSP 1 Score: 320.5 bits (820), Expect = 1.200e-83
Identity = 161/288 (55.90%), Postives = 214/288 (74.31%), Query Frame = 0 
Query:  357 GGIGSGQNGTAVMGENDPVSRLKKLGAEVFEKA-TEEELDWTCLAGYESIKAEVEDTVVMALQHAEAYDAIARQTRERYESNRPRAVLFEGPPGTGKTLTARIIASRTEVPLVFISTERVLSKWYGDSEKNLAKVFEACKELGGAIIFIDEVDALAASR-DTNMHEATRRLLSVILQSIEGFRGRNKNVLICATNRKQDLDSALLSRFDVSIKFDLPTCPARQAIFARYAKHLAGNELARLAEASEAYSCRDIKEVCENTERKWASKTIRGQADGLTPPLKEYLNQLK 643
            G  GS  NG  V  +++ + +L+ LG +VFE + +E+ L+W  LAGY+ +K E+EDTVV+ALQ+ + YD IAR+TR RYESNRPRAVLFEGPPGTGKTL+ARIIA +  +P++ I  E V+SKWYGDSEK ++ +F+AC++  GAIIFIDE+DALA  R    MHEA+RR+LSV+LQ +EGF    K  +ICATNRKQDLDSAL+SRFD+ I++DLP    R+A+FARYAK L  ++L++LA  S   SCRDIKE+CE  ERKWASK ++ +     P ++ Y +  K
Sbjct:  283 GQRGSTSNG-PVGSKDEAIQQLQSLGIDVFEPSDSEDSLNWDSLAGYDDVKLEIEDTVVLALQNPDLYDQIARKTRCRYESNRPRAVLFEGPPGTGKTLSARIIAQQAGIPMIHIPIESVVSKWYGDSEKKMSAIFDACEKFDGAIIFIDEIDALAGDRAGGTMHEASRRILSVLLQKVEGFASAKKTTVICATNRKQDLDSALISRFDLCIRYDLPNEATRKAVFARYAKQLTRDDLSQLAAISGGLSCRDIKEICEYAERKWASKVLKKEVTEELPSVQAYADATK 569
[Close]
BLAST of NO19G01970 vs. NCBI_GenBank
Match: XP_008907667.1 (hypothetical protein PPTG_13603 [Phytophthora parasitica INRA-310] >ETI43575.1 hypothetical protein F443_11556 [Phytophthora parasitica P1569] >ETK83609.1 hypothetical protein L915_11242 [Phytophthora parasitica] >ETL37022.1 hypothetical protein L916_11142 [Phytophthora parasitica] >ETL90193.1 hypothetical protein L917_11043 [Phytophthora parasitica] >ETM43488.1 hypothetical protein L914_11076 [Phytophthora parasitica] >ETN07291.1 hypothetical protein PPTG_13603 [Phytophthora parasitica INRA-310] >ETO72202.1 hypothetical protein F444_11626 [Phytophthora parasitica P1976] >ETP13350.1 hypothetical protein F441_11469 [Phytophthora parasitica CJ01A1] >ETP41419.1 hypothetical protein F442_11451 [Phytophthora parasitica P10297])

HSP 1 Score: 319.7 bits (818), Expect = 2.100e-83
Identity = 161/295 (54.58%), Postives = 212/295 (71.86%), Query Frame = 0 
Query:  355 RGGGIGSGQNGTAVM-----GENDPVSRLKKLGAEVFEKA-TEEELDWTCLAGYESIKAEVEDTVVMALQHAEAYDAIARQTRERYESNRPRAVLFEGPPGTGKTLTARIIASRTEVPLVFISTERVLSKWYGDSEKNLAKVFEACKELGGAIIFIDEVDALAASRD-TNMHEATRRLLSVILQSIEGFRGRNKNVLICATNRKQDLDSALLSRFDVSIKFDLPTCPARQAIFARYAKHLAGNELARLAEASEAYSCRDIKEVCENTERKWASKTIRGQADGLTPPLKEYLNQLK 643
            R    G G+N TA        + + + +L+ LG +VFE    E  L W  LAGYE +K E+EDTVV+ALQ+ E Y+ IAR+TR RYESNRPRAVLFEGPPGTGKTL+ARIIA +  +P++ I  E V+SKWYGDSEK ++ +F+AC++L GAIIFIDE+DALA  R    MHEA+RR+LSV+LQ +EGF    K  ++CATNRKQDLD+AL+SRFD+SI+++LP    R+A+F RYA+ L+  EL++LA  S   SCRDIKE+CE  ERKWASK ++ +     P L+ Y+  +K
Sbjct:  273 RNALFGRGRNATAATVAPPDSKEEAIQQLQGLGIDVFEPTQNENSLTWDSLAGYEKVKLEIEDTVVLALQNPELYERIARKTRCRYESNRPRAVLFEGPPGTGKTLSARIIAQQAGIPMIHIPIESVVSKWYGDSEKKMSAIFDACEKLDGAIIFIDEIDALAGDRSGGTMHEASRRILSVLLQKVEGFASAKKTTVVCATNRKQDLDAALISRFDLSIRYNLPDEKTRRAVFGRYARQLSEEELSQLAAVSSQLSCRDIKEICEYAERKWASKVLKKEETTELPTLQTYMEAVK 567
[Close]
BLAST of NO19G01970 vs. NCBI_GenBank
Match: XP_008907670.1 (hypothetical protein, variant 3 [Phytophthora parasitica INRA-310] >ETI43578.1 hypothetical protein, variant 3 [Phytophthora parasitica P1569] >ETK83612.1 hypothetical protein, variant 3 [Phytophthora parasitica] >ETL37025.1 hypothetical protein, variant 3 [Phytophthora parasitica] >ETL90196.1 hypothetical protein, variant 3 [Phytophthora parasitica] >ETM43491.1 hypothetical protein, variant 3 [Phytophthora parasitica] >ETN07294.1 hypothetical protein, variant 3 [Phytophthora parasitica INRA-310] >ETO72205.1 hypothetical protein, variant 3 [Phytophthora parasitica P1976] >ETP13353.1 hypothetical protein, variant 3 [Phytophthora parasitica CJ01A1] >ETP41422.1 hypothetical protein, variant 3 [Phytophthora parasitica P10297])

HSP 1 Score: 319.7 bits (818), Expect = 2.100e-83
Identity = 161/295 (54.58%), Postives = 212/295 (71.86%), Query Frame = 0 
Query:  355 RGGGIGSGQNGTAVM-----GENDPVSRLKKLGAEVFEKA-TEEELDWTCLAGYESIKAEVEDTVVMALQHAEAYDAIARQTRERYESNRPRAVLFEGPPGTGKTLTARIIASRTEVPLVFISTERVLSKWYGDSEKNLAKVFEACKELGGAIIFIDEVDALAASRD-TNMHEATRRLLSVILQSIEGFRGRNKNVLICATNRKQDLDSALLSRFDVSIKFDLPTCPARQAIFARYAKHLAGNELARLAEASEAYSCRDIKEVCENTERKWASKTIRGQADGLTPPLKEYLNQLK 643
            R    G G+N TA        + + + +L+ LG +VFE    E  L W  LAGYE +K E+EDTVV+ALQ+ E Y+ IAR+TR RYESNRPRAVLFEGPPGTGKTL+ARIIA +  +P++ I  E V+SKWYGDSEK ++ +F+AC++L GAIIFIDE+DALA  R    MHEA+RR+LSV+LQ +EGF    K  ++CATNRKQDLD+AL+SRFD+SI+++LP    R+A+F RYA+ L+  EL++LA  S   SCRDIKE+CE  ERKWASK ++ +     P L+ Y+  +K
Sbjct:  183 RNALFGRGRNATAATVAPPDSKEEAIQQLQGLGIDVFEPTQNENSLTWDSLAGYEKVKLEIEDTVVLALQNPELYERIARKTRCRYESNRPRAVLFEGPPGTGKTLSARIIAQQAGIPMIHIPIESVVSKWYGDSEKKMSAIFDACEKLDGAIIFIDEIDALAGDRSGGTMHEASRRILSVLLQKVEGFASAKKTTVVCATNRKQDLDAALISRFDLSIRYNLPDEKTRRAVFGRYARQLSEEELSQLAAVSSQLSCRDIKEICEYAERKWASKVLKKEETTELPTLQTYMEAVK 477
[Close]
BLAST of NO19G01970 vs. NCBI_GenBank
Match: CCI43437.1 (unnamed protein product [Albugo candida])

HSP 1 Score: 318.5 bits (815), Expect = 4.700e-83
Identity = 155/274 (56.57%), Postives = 202/274 (73.72%), Query Frame = 0 
Query:  385 VFEKATEEE--LDWTCLAGYESIKAEVEDTVVMALQHAEAYDAIARQTRERYESNRPRAVLFEGPPGTGKTLTARIIASRTEVPLVFISTERVLSKWYGDSEKNLAKVFEACKELGGAIIFIDEVDALAASRDTNMHEATRRLLSVILQSIEGFRGRNKNVLICATNRKQDLDSALLSRFDVSIKFDLPTCPARQAIFARYAKHLAGNELARLAEASEAYSCRDIKEVCENTERKWASKTIRGQADGLTPPLKEYLNQLKAQTLSDHQTLPHNV 657
            V+   +E+E  L+W  LAGY  +K E+EDT+V+ALQ+ + YD IAR TR RYESNRPRAVLFEGPPGTGKTLTARIIA +  +PL+ I  E V+SKWYG+SEK ++ +F+AC++L GAIIFIDE+DALA  R   +HEA+RR+LSV+LQ +EGF    K  +ICATNRK+DLD+ALLSRFD+ I++DLP   AR A+F RYAKHL+  EL +L+ A+   SCR IKE+CE  ERKWAS+ +RG+  G  P +  YL+  KA  +      P ++
Sbjct:  157 VYNSKSEDESALNWDSLAGYNDVKKEIEDTIVLALQNPDLYDQIARNTRCRYESNRPRAVLFEGPPGTGKTLTARIIAQQAGIPLIHIPVEAVVSKWYGESEKKMSAIFDACEQLEGAIIFIDEIDALAGDRSGGIHEASRRILSVLLQKVEGFASAEKITVICATNRKEDLDAALLSRFDLCIRYDLPDQIARTAVFNRYAKHLSKEELEKLSSAAAGLSCRAIKEICEYAERKWASQVLRGKKFGNLPSIDTYLDATKAHVIGVGHQAPSDI 430
[Close]
BLAST of NO19G01970 vs. NCBI_GenBank
Match: CCI43438.1 (unnamed protein product [Albugo candida])

HSP 1 Score: 318.5 bits (815), Expect = 4.700e-83
Identity = 155/274 (56.57%), Postives = 202/274 (73.72%), Query Frame = 0 
Query:  385 VFEKATEEE--LDWTCLAGYESIKAEVEDTVVMALQHAEAYDAIARQTRERYESNRPRAVLFEGPPGTGKTLTARIIASRTEVPLVFISTERVLSKWYGDSEKNLAKVFEACKELGGAIIFIDEVDALAASRDTNMHEATRRLLSVILQSIEGFRGRNKNVLICATNRKQDLDSALLSRFDVSIKFDLPTCPARQAIFARYAKHLAGNELARLAEASEAYSCRDIKEVCENTERKWASKTIRGQADGLTPPLKEYLNQLKAQTLSDHQTLPHNV 657
            V+   +E+E  L+W  LAGY  +K E+EDT+V+ALQ+ + YD IAR TR RYESNRPRAVLFEGPPGTGKTLTARIIA +  +PL+ I  E V+SKWYG+SEK ++ +F+AC++L GAIIFIDE+DALA  R   +HEA+RR+LSV+LQ +EGF    K  +ICATNRK+DLD+ALLSRFD+ I++DLP   AR A+F RYAKHL+  EL +L+ A+   SCR IKE+CE  ERKWAS+ +RG+  G  P +  YL+  KA  +      P ++
Sbjct:   85 VYNSKSEDESALNWDSLAGYNDVKKEIEDTIVLALQNPDLYDQIARNTRCRYESNRPRAVLFEGPPGTGKTLTARIIAQQAGIPLIHIPVEAVVSKWYGESEKKMSAIFDACEQLEGAIIFIDEIDALAGDRSGGIHEASRRILSVLLQKVEGFASAEKITVICATNRKEDLDAALLSRFDLCIRYDLPDQIARTAVFNRYAKHLSKEELEKLSSAAAGLSCRAIKEICEYAERKWASQVLRGKKFGNLPSIDTYLDATKAHVIGVGHQAPSDI 358
[Close]
BLAST of NO19G01970 vs. NCBI_GenBank
Match: XP_009843102.1 (hypothetical protein H257_16389 [Aphanomyces astaci] >ETV67411.1 hypothetical protein H257_16389 [Aphanomyces astaci])

HSP 1 Score: 315.1 bits (806), Expect = 5.200e-82
Identity = 152/266 (57.14%), Postives = 207/266 (77.82%), Query Frame = 0 
Query:  375 VSRLKKLGAEVFEKATEEELDWTCLAGYESIKAEVEDTVVMALQHAEAYDAIARQTRERYESNRPRAVLFEGPPGTGKTLTARIIASRTEVPLVFISTERVLSKWYGDSEKNLAKVFEACKEL-GGAIIFIDEVDALAASRDT-NMHEATRRLLSVILQSIEGFRGRNKNVLICATNRKQDLDSALLSRFDVSIKFDLPTCPARQAIFARYAKHLAGNELARLAEASEAYSCRDIKEVCENTERKWASKTIRGQADGLTPPLKEYL 639
            ++ L++LG +V++ +T  +L W  LAGY+ +K E++DTVV+ALQ+   ++ IA+ TR R+ESNRPRA+LFEGPPGTGKTL+ARIIAS+ +VPL+ +  E ++SKWYG+SE+ LAK+F+AC +L  GAI+FIDE+DALA+ R +  MHEATRRLLSV+LQ +EGF    K  LI ATNRKQDLDSALLSRF+++I++DLP    R+A+F RYAK L   +L +LA A+  +SCRDIKE+CE TERKWAS+ +R Q D   P ++ Y+
Sbjct:  190 IATLQQLGLDVYDSSTSGDLTWDALAGYDEVKREIDDTVVLALQNPSFFENIAKHTRARFESNRPRAILFEGPPGTGKTLSARIIASQAKVPLIHLPVESIVSKWYGESEQKLAKIFDACDQLETGAILFIDEIDALASDRSSGTMHEATRRLLSVLLQKVEGFASSQKVTLIAATNRKQDLDSALLSRFNLTIRYDLPDKATREAVFHRYAKQLTDEDLHQLAAATATWSCRDIKELCEYTERKWASQVLRKQQDSPVPSVEAYV 455
[Close]
BLAST of NO19G01970 vs. NCBI_GenBank
Match: XP_009843103.1 (hypothetical protein, variant 1 [Aphanomyces astaci] >ETV67412.1 hypothetical protein, variant 1 [Aphanomyces astaci])

HSP 1 Score: 315.1 bits (806), Expect = 5.200e-82
Identity = 152/266 (57.14%), Postives = 207/266 (77.82%), Query Frame = 0 
Query:  375 VSRLKKLGAEVFEKATEEELDWTCLAGYESIKAEVEDTVVMALQHAEAYDAIARQTRERYESNRPRAVLFEGPPGTGKTLTARIIASRTEVPLVFISTERVLSKWYGDSEKNLAKVFEACKEL-GGAIIFIDEVDALAASRDT-NMHEATRRLLSVILQSIEGFRGRNKNVLICATNRKQDLDSALLSRFDVSIKFDLPTCPARQAIFARYAKHLAGNELARLAEASEAYSCRDIKEVCENTERKWASKTIRGQADGLTPPLKEYL 639
            ++ L++LG +V++ +T  +L W  LAGY+ +K E++DTVV+ALQ+   ++ IA+ TR R+ESNRPRA+LFEGPPGTGKTL+ARIIAS+ +VPL+ +  E ++SKWYG+SE+ LAK+F+AC +L  GAI+FIDE+DALA+ R +  MHEATRRLLSV+LQ +EGF    K  LI ATNRKQDLDSALLSRF+++I++DLP    R+A+F RYAK L   +L +LA A+  +SCRDIKE+CE TERKWAS+ +R Q D   P ++ Y+
Sbjct:  175 IATLQQLGLDVYDSSTSGDLTWDALAGYDEVKREIDDTVVLALQNPSFFENIAKHTRARFESNRPRAILFEGPPGTGKTLSARIIASQAKVPLIHLPVESIVSKWYGESEQKLAKIFDACDQLETGAILFIDEIDALASDRSSGTMHEATRRLLSVLLQKVEGFASSQKVTLIAATNRKQDLDSALLSRFNLTIRYDLPDKATREAVFHRYAKQLTDEDLHQLAAATATWSCRDIKELCEYTERKWASQVLRKQQDSPVPSVEAYV 440
[Close]
BLAST of NO19G01970 vs. NCBI_GenBank
Match: OQR86725.1 (ATPase [Achlya hypogyna])

HSP 1 Score: 311.2 bits (796), Expect = 7.500e-81
Identity = 157/269 (58.36%), Postives = 206/269 (76.58%), Query Frame = 0 
Query:  378 LKKLGAEVFE-KATEEELDWTCLAGYESIKAEVEDTVVMALQHAEAYDAIARQTRERYESNRPRAVLFEGPPGTGKTLTARIIASRTEVPLVFISTERVLSKWYGDSEKNLAKVFEACKELGGAIIFIDEVDALAASRDT-NMHEATRRLLSVILQSIEGFRGRNKNVLICATNRKQDLDSALLSRFDVSIKFDLPTCPARQAIFARYAKHLAGNELARLAEASEAYSCRDIKEVCENTERKWASKTIRG-QADGLTPPLKEYLNQLKA 644
            L KLG  V++ +  +  L+W  LAGY ++K E++DTVV+ALQ+ + Y+AIA QTR R+ESNRPRA+LFEGPPGTGKTL+ARIIA++  VPLV I  E V+SKW+G+SEK +A +F+AC++L GA+IFIDE+DALA  R +  MHEA+RR+LSV+LQ +EGF+   K  LI ATNRKQDLD+ALLSRF++ I++DLP    RQA+F RYAK L+  ELA LA  ++  SCRDIKEVCE TERKWAS+ +RG +  G TP +  Y   ++A
Sbjct:  199 LAKLGLAVYDGEGLDSVLNWDSLAGYAAVKTEIQDTVVLALQNPDLYEAIAHQTRCRFESNRPRAILFEGPPGTGKTLSARIIAAQAGVPLVHIPVESVVSKWFGESEKKMAAIFDACEQLEGALIFIDEIDALATERSSGGMHEASRRMLSVLLQKLEGFQSAKKVTLIAATNRKQDLDAALLSRFNLCIRYDLPDETTRQAVFQRYAKQLSTTELAALARLTQGQSCRDIKEVCEYTERKWASRVLRGDEPRGSTPTVAAYTAAVEA 467
[Close]
BLAST of NO19G01970 vs. NCBI_GenBank
Match: XP_012204637.1 (hypothetical protein SPRG_10098, partial [Saprolegnia parasitica CBS 223.65] >KDO24568.1 hypothetical protein SPRG_10098, partial [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 303.1 bits (775), Expect = 2.000e-78
Identity = 159/287 (55.40%), Postives = 206/287 (71.78%), Query Frame = 0 
Query:  361 SGQNGTAVMGENDPVSRLKKLGAEVFEKATEEELDWTCLAGYESIKAEVEDTVVMALQHAEAYDAIARQTRERYESNRPRAVLFEGPPGTGKTLTARIIASRTEVPLVFISTERVLSKWYGDSEKNLAKVFEACKELGGAIIFIDEVDALAASRDT-NMHEATRRLLSVILQSIEGFRGRNKNVLICATNRKQDLDSALLSRFDVSIKFDLPTCPARQAIFARYAKHLAGNELARLAEASEAYSCRDIKEVCENTERKWASKTIRG-QADGLTPPLKEYLNQLKAQT 646
            SG   +  +  +  +  + KLG  V++   +  L W  LAGY+++KAE++DTVV+ALQ+   YDAIA +TR RYESNRPRA+L EGPPGTGKTL+ARI+AS+  VPLV I  E ++SKWYGDSEK +A +F+A  +L GA+IFIDE+DALA +R + NMHEATRR+LSV+LQ +EGF    K  LI ATNRKQDLD+ALLSRF++ I++DLP    R A+F RYAK L+  +L  LA  +   SCRDIKE+CE TERKWAS  +R  Q    TP ++ YL  +KA T
Sbjct:  159 SGNTRSQNVSRSRALEDVAKLGLIVYD--GDGVLTWDSLAGYDAVKAEIQDTVVLALQNPALYDAIAERTRCRYESNRPRAILLEGPPGTGKTLSARIVASQAGVPLVHIPIESLVSKWYGDSEKKMAAIFDAVDKLDGALIFIDEIDALATARGSGNMHEATRRMLSVLLQKLEGFESAKKVTLIAATNRKQDLDAALLSRFNLCIRYDLPDDATRAAVFQRYAKQLSSTDLETLAHHTSGKSCRDIKEICEYTERKWASHVLRNEQLTTSTPNVEAYLAAIKATT 443
The following BLAST results are available for this feature:
BLAST of NO19G01970 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
GAX99319.11.200e-8355.90ATPase, partial [Pythium insidiosum][more]
GAX94803.11.200e-8355.90ATPase, partial [Pythium insidiosum][more]
XP_008907667.12.100e-8354.58hypothetical protein PPTG_13603 [Phytophthora para... [more]
XP_008907670.12.100e-8354.58hypothetical protein, variant 3 [Phytophthora para... [more]
CCI43437.14.700e-8356.57unnamed protein product [Albugo candida][more]
CCI43438.14.700e-8356.57unnamed protein product [Albugo candida][more]
XP_009843102.15.200e-8257.14hypothetical protein H257_16389 [Aphanomyces astac... [more]
XP_009843103.15.200e-8257.14hypothetical protein, variant 1 [Aphanomyces astac... [more]
OQR86725.17.500e-8158.36ATPase [Achlya hypogyna][more]
XP_012204637.12.000e-7855.40hypothetical protein SPRG_10098, partial [Saproleg... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL012nonsL012Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR034ncniR034Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR039ngnoR039Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK004538NSK004538Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO19G01970.1NO19G01970.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|599301gene_7598Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100030g14gene6758Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO19G01970.1NO19G01970.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO19G01970 ID=NO19G01970|Name=NO19G01970|organism=Nannochloropsis oceanica|type=gene|length=1971bp
ATGCTCCACCAGCGGAAAGCGGCGATGGCAGCCGCCGCTGCCGGCGCGTG
CCGCAGCATTCGCAGCGTCGCATCGACCTTGCCCTCCTCTTCGCTCTCGA
CACGCATCTATTTTATGGACCACCCGCCGCTCCACACCGCGCGCCCCGCG
TCTATGGCATCCTCTTCTTCGTCGTCTAATGCTTGGCTGCCAGCCGCGCT
GGTGGCCGTGGCAACTGCTTCCGTCCTGACGTCGCTGACAGAGGCAGCGC
CACCTACAGCGGCGGCGTCGGCACCGGACAGCAGCGACGACACCAAAGAT
AATTCAAAGGAAAATGTGTTGCCTATGCGAGAGGTCATGGCATTGATCGA
AAGCCGGCTGAAGCCCTTTCGCACGGAGCGCTTCCTTTCTTCTCGACCTC
GCAGAAGTAGCAGAAGCGGCAGCGGTACATTTCCTCCTACCGTCGGGGAG
CACGACCTCCCCACCGTTGCCAGCAAAACTTTCCCCAAAATCGCCGTGTT
GAGCAAGGGCAAGGGCGTGGATGAGCCCTACACCATCGAAGTTCCCTTGC
CGCCAACGGCCAGTAGGGAAACAAATGTGCTCGCAGCCTGCCTACATGCC
TTGCAGAAGAAGGGGCACACGCTCACGTTCCACACGGGCTTGACCACAAA
CAATGGAACCAGCCTTTCCTTCGTCTTCGGCGACCAGTCCGGATCCGTCC
TTCTGACCTCTTCGTCGGCTGTCGCGGCGCCATCATCGTCGACTGAGGTG
ATGCCATCGACAGGGACAGGCAAATCAAGCCTCCTTCTGTACAAGACCAA
GGGCTTTACAGAAGCGGACGTAGACGCGGTTGTTGATTCGTACATCATGG
CTTGGAGGAGCAGCCCAGACGATCAGCTCACCGGCTCATTCCTCAGCAAT
TTTACGGATGTCCTAGATGCGCTCCGTATTGGTGGCGGCGGTGGTGGCAA
ATACGCATTTGATCACGAGCAGGACGTCCCTTACTCGTCCCCTCAGCGCC
CCGTCCCACCACATTCCCCCTTTTCCCGGCCGTCCTCGACCCGCGGGGAA
AGCATAGTTGAGCGAGGCGGCGGTATCGGGAGCGGGCAGAATGGCACTGC
TGTGATGGGAGAAAACGACCCGGTGTCCAGGCTAAAGAAGCTTGGCGCGG
AGGTGTTCGAAAAGGCGACGGAAGAGGAACTGGACTGGACTTGCCTAGCG
GGATACGAGAGCATCAAGGCTGAGGTAGAGGATACAGTAGTCATGGCCTT
GCAGCACGCCGAGGCCTACGATGCTATTGCCCGTCAGACCCGCGAGCGTT
ATGAGAGTAATCGCCCAAGGGCCGTTCTTTTTGAGGGCCCTCCAGGGACG
GGCAAGACATTGACCGCTCGCATCATTGCTAGCCGTACGGAGGTGCCGTT
GGTCTTCATTTCAACAGAGCGCGTCCTCAGTAAATGGTATGGCGATTCGG
AGAAGAATTTGGCGAAGGTTTTCGAGGCATGCAAAGAACTGGGAGGGGCT
ATCATCTTTATTGACGAAGTAGACGCGTTGGCTGCCAGCCGAGACACTAA
CATGCACGAGGCTACGAGGCGTCTCCTTAGTGTCATACTGCAGAGTATCG
AGGGCTTTAGAGGCCGCAACAAAAACGTGCTCATATGCGCCACCAACCGC
AAGCAAGACCTCGATTCGGCCTTACTTTCTCGATTTGACGTATCCATCAA
GTTTGACCTGCCCACATGCCCTGCCCGTCAGGCGATCTTTGCCCGGTACG
CAAAACATTTGGCCGGGAATGAGCTAGCCCGTCTGGCGGAGGCTTCCGAA
GCCTACTCCTGCAGGGATATTAAGGAGGTGTGTGAAAATACGGAGCGGAA
GTGGGCTTCCAAAACCATTCGTGGACAAGCGGACGGCCTCACACCGCCAC
TCAAGGAGTACCTCAATCAACTCAAAGCGCAGACCCTTTCCGATCATCAA
ACCCTGCCTCATAACGTTTAA
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protein sequence of NO19G01970.1

>NO19G01970.1-protein ID=NO19G01970.1-protein|Name=NO19G01970.1|organism=Nannochloropsis oceanica|type=polypeptide|length=657bp
MLHQRKAAMAAAAAGACRSIRSVASTLPSSSLSTRIYFMDHPPLHTARPA
SMASSSSSSNAWLPAALVAVATASVLTSLTEAAPPTAAASAPDSSDDTKD
NSKENVLPMREVMALIESRLKPFRTERFLSSRPRRSSRSGSGTFPPTVGE
HDLPTVASKTFPKIAVLSKGKGVDEPYTIEVPLPPTASRETNVLAACLHA
LQKKGHTLTFHTGLTTNNGTSLSFVFGDQSGSVLLTSSSAVAAPSSSTEV
MPSTGTGKSSLLLYKTKGFTEADVDAVVDSYIMAWRSSPDDQLTGSFLSN
FTDVLDALRIGGGGGGKYAFDHEQDVPYSSPQRPVPPHSPFSRPSSTRGE
SIVERGGGIGSGQNGTAVMGENDPVSRLKKLGAEVFEKATEEELDWTCLA
GYESIKAEVEDTVVMALQHAEAYDAIARQTRERYESNRPRAVLFEGPPGT
GKTLTARIIASRTEVPLVFISTERVLSKWYGDSEKNLAKVFEACKELGGA
IIFIDEVDALAASRDTNMHEATRRLLSVILQSIEGFRGRNKNVLICATNR
KQDLDSALLSRFDVSIKFDLPTCPARQAIFARYAKHLAGNELARLAEASE
AYSCRDIKEVCENTERKWASKTIRGQADGLTPPLKEYLNQLKAQTLSDHQ
TLPHNV*
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Synonyms
Publications