NO19G01970, NO19G01970 (gene) Nannochloropsis oceanica

Overview
NameNO19G01970
Unique NameNO19G01970
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1971
Alignment locationchr19:575363..577333 -

Link to JBrowse

Properties
Property NameValue
DescriptionAaa-type atpase family protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr19genomechr19:575363..577333 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005524ATP binding
GO:0005524ATP binding
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
IPR003959ATPase_AAA_core
IPR003593AAA+_ATPase
Homology
BLAST of NO19G01970 vs. NCBI_GenBank
Match: EWM23692.1 (aaa-type atpase family protein [Nannochloropsis gaditana])

HSP 1 Score: 663.7 bits (1711), Expect = 6.000e-187
Identity = 363/553 (65.64%), Postives = 409/553 (73.96%), Query Frame = 0
Query:  106 VLPMREVMALIESRLKPFRTERFLSSRPRRSSRSGSGTFPPTVGEHDLPTVASKTFPKIAVLSKGKGVDEPYTIEVPLPPTASRETNVLAACLHALQKKGHTLTFHTGLTTNNGTSLSFVFGDQSGSVLLTXXXXXXXXXXXXXXXPSTGTGKSSLLLYKTKGFTEADVDAVVDSYIMAWRSSPDDQLTGSFLSNFTDVLDALRIGGGGGGKYAFDHEQDVPYSSPQRPVPPHSPFSRPSSTRGESIVERGGGIGSGQNGTAVMGENDPVSRLKKLGAEVFEKATEEELDWTCLAGYESIKAEVEDTVVMALQHAEAYDAIARQTRERYESNRPRAVLFEGPPGTGKTLTARIIASRTEVPLVFISTERVLSKWYGDSEKNLAKVFEACKELGGAIIFIDEVDALAASRDTNMHEATRRLLSVILQSIEGFRGRNKNVLICATNRKQDLDSALLSRFDVSIKFDLPTCPARQAIFARYAKHLAGNELARLAEASEAYSCRDIKEVCENTERKWASKTIRGQADGLTPPLKEYLNQLKAQTLSDHQTLP--HNV 657
            +LPM EVM+ I+ RLK FRTERFL+   R   RSG      T      P  A+ +FPKIAVL+KG+  +EP+TIEVPLP     E  VLAA L ALQKKGHT+TFHTGL ++ GTSLSFV  DQSGS+LLT                    G S LLL+K +GFTE DVDAVV+SYI AW  +  D + G    NF  +LDA R GG  G +   D EQD P            PF  P STRG   ++R G +  G   T   G NDPV+RL+KLGAEVFEK   EE+DW+CLAGYE +KAEVEDTVVMALQHAEAY+AIARQTRERYESNRPRAVLFEGPPGTGKTLTARI+ASRTEVPLVF+ TERVLSKWYGDSEKNLAK+FEAC+ELGGAIIFIDEVDALA SRD+NMHEATRRLLSVILQSIEGF+G ++NVLICATNR+QDLDSALLSRFDVSIKF+LP   ARQAIFARYAKHL   ELARLAEASE +SCRDIKE CEN ERKWASKT+RGQ  G TP L+EYL QLKA  L+ H+  P  HN+
Sbjct:  113 LLPMSEVMSQIQDRLKQFRTERFLAPSHRGPGRSGGEGSRRTRD----PLQAATSFPKIAVLTKGRSAEEPFTIEVPLPARGGSEARVLAASLQALQKKGHTITFHTGLASDQGTSLSFVLADQSGSLLLTSSPAASVPSEAPQAVLPARPGTSRLLLFKKEGFTEGDVDAVVESYISAWSGNAGDPIAG----NFASILDAFRAGGTAGVQQFLDSEQDTPL-----------PFF-PPSTRG--ALDRPGVVMGGNQETDTAGRNDPVARLRKLGAEVFEKGKGEEVDWSCLAGYEGVKAEVEDTVVMALQHAEAYEAIARQTRERYESNRPRAVLFEGPPGTGKTLTARIVASRTEVPLVFVPTERVLSKWYGDSEKNLAKIFEACQELGGAIIFIDEVDALATSRDSNMHEATRRLLSVILQSIEGFKGGSQNVLICATNRRQDLDSALLSRFDVSIKFELPALGARQAIFARYAKHLKAEELARLAEASEGFSCRDIKETCENVERKWASKTLRGQERGPTPVLQEYLQQLKAMHLA-HRRSPQSHNL 642          
BLAST of NO19G01970 vs. NCBI_GenBank
Match: CCA14155.1 (ATPase putative [Albugo laibachii Nc14])

HSP 1 Score: 330.5 bits (846), Expect = 1.200e-86
Identity = 161/282 (57.09%), Postives = 206/282 (73.05%), Query Frame = 0
Query:  375 VSRLKKLGAEVFEKATEEE--LDWTCLAGYESIKAEVEDTVVMALQHAEAYDAIARQTRERYESNRPRAVLFEGPPGTGKTLTARIIASRTEVPLVFISTERVLSKWYGDSEKNLAKVFEACKELGGAIIFIDEVDALAASRDTNMHEATRRLLSVILQSIEGFRGRNKNVLICATNRKQDLDSALLSRFDVSIKFDLPTCPARQAIFARYAKHLAGNELARLAEASEAYSCRDIKEVCENTERKWASKTIRGQADGLTPPLKEYLNQLKAQTLS-DHQTLP 654
            + +L+ LG EV+   +E+E  LDW  LAGY+ +K E+EDT+V+ALQ+ + YD IAR TR RYESNRPRAVLFEGPPGTGKTLTARIIA +  +P++ I  E V+SKWYG+SEK L+ +F+AC++L GAIIFIDE+DALA  R   +HEA+RR+LSV+LQ +EGF    K  +ICATNRK+DLD+ALLSRFD+ I++DLP    R AIF RYAK L+  EL +L+  S   SCR IKE+CE  ERKWAS+ +RG+  G  P +  YLN   A  +   HQ  P
Sbjct:  265 LEQLQSLGLEVYNSKSEDESALDWNSLAGYDDVKKEIEDTIVLALQNPDLYDQIARSTRCRYESNRPRAVLFEGPPGTGKTLTARIIAQQAGIPMIHIPVEAVVSKWYGESEKKLSTIFDACEQLDGAIIFIDEIDALAGDRSGGIHEASRRILSVLLQKVEGFESAQKTTVICATNRKEDLDAALLSRFDLCIRYDLPDQSTRTAIFKRYAKQLSDEELEKLSSLSSGLSCRAIKEICEYAERKWASQVLRGEKSGNLPTIDAYLNATNAHVMGVGHQAPP 546          
BLAST of NO19G01970 vs. NCBI_GenBank
Match: XP_008874165.1 (hypothetical protein H310_09784 [Aphanomyces invadans] >ETV96919.1 hypothetical protein H310_09784 [Aphanomyces invadans])

HSP 1 Score: 326.6 bits (836), Expect = 1.700e-85
Identity = 157/272 (57.72%), Postives = 211/272 (77.57%), Query Frame = 0
Query:  375 VSRLKKLGAEVFEKATEEELDWTCLAGYESIKAEVEDTVVMALQHAEAYDAIARQTRERYESNRPRAVLFEGPPGTGKTLTARIIASRTEVPLVFISTERVLSKWYGDSEKNLAKVFEACKEL-GGAIIFIDEVDALAASRDT-NMHEATRRLLSVILQSIEGFRGRNKNVLICATNRKQDLDSALLSRFDVSIKFDLPTCPARQAIFARYAKHLAGNELARLAEASEAYSCRDIKEVCENTERKWASKTIRGQADGLTPPLKEYLNQLKAQ 645
            +S L++LG +V++  T E+L W  LAGY+ +K E++DTV++ALQ+   Y+ IA  TRER+E+NRPRA+LFEGPPGTGKTL+ARIIAS+ +VPL+ +  E ++SKWYG+SE+ LAK+F+AC +L  GAI+FIDE+DALA+ R T NMHEATRRLLSV+LQ +EGF    K  LI ATNRKQDLDSALLSRF+++I++DLP    RQA+F RYAK L+ N+L +LA  +  +SCRDIKE+CE TERKWAS+ +R +     P L+ Y++ +  Q
Sbjct:  175 ISALQQLGLDVYDATTTEDLTWDALAGYDEVKQEIDDTVILALQNPSFYENIANHTRERFETNRPRAILFEGPPGTGKTLSARIIASQAKVPLIHLPVESIVSKWYGESEQKLAKIFDACDQLENGAILFIDEIDALASDRSTGNMHEATRRLLSVLLQKVEGFSSSQKVTLIAATNRKQDLDSALLSRFNLTIRYDLPDLATRQAVFRRYAKQLSNNDLHQLAATTATWSCRDIKELCEYTERKWASQVLRREQKSPVPTLEAYVSAIDHQ 446          
BLAST of NO19G01970 vs. NCBI_GenBank
Match: XP_008874166.1 (hypothetical protein, variant 1 [Aphanomyces invadans] >ETV96920.1 hypothetical protein, variant 1 [Aphanomyces invadans])

HSP 1 Score: 326.6 bits (836), Expect = 1.700e-85
Identity = 157/272 (57.72%), Postives = 211/272 (77.57%), Query Frame = 0
Query:  375 VSRLKKLGAEVFEKATEEELDWTCLAGYESIKAEVEDTVVMALQHAEAYDAIARQTRERYESNRPRAVLFEGPPGTGKTLTARIIASRTEVPLVFISTERVLSKWYGDSEKNLAKVFEACKEL-GGAIIFIDEVDALAASRDT-NMHEATRRLLSVILQSIEGFRGRNKNVLICATNRKQDLDSALLSRFDVSIKFDLPTCPARQAIFARYAKHLAGNELARLAEASEAYSCRDIKEVCENTERKWASKTIRGQADGLTPPLKEYLNQLKAQ 645
            +S L++LG +V++  T E+L W  LAGY+ +K E++DTV++ALQ+   Y+ IA  TRER+E+NRPRA+LFEGPPGTGKTL+ARIIAS+ +VPL+ +  E ++SKWYG+SE+ LAK+F+AC +L  GAI+FIDE+DALA+ R T NMHEATRRLLSV+LQ +EGF    K  LI ATNRKQDLDSALLSRF+++I++DLP    RQA+F RYAK L+ N+L +LA  +  +SCRDIKE+CE TERKWAS+ +R +     P L+ Y++ +  Q
Sbjct:  143 ISALQQLGLDVYDATTTEDLTWDALAGYDEVKQEIDDTVILALQNPSFYENIANHTRERFETNRPRAILFEGPPGTGKTLSARIIASQAKVPLIHLPVESIVSKWYGESEQKLAKIFDACDQLENGAILFIDEIDALASDRSTGNMHEATRRLLSVLLQKVEGFSSSQKVTLIAATNRKQDLDSALLSRFNLTIRYDLPDLATRQAVFRRYAKQLSNNDLHQLAATTATWSCRDIKELCEYTERKWASQVLRREQKSPVPTLEAYVSAIDHQ 414          
BLAST of NO19G01970 vs. NCBI_GenBank
Match: CBN79434.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 326.2 bits (835), Expect = 2.300e-85
Identity = 183/392 (46.68%), Postives = 240/392 (61.22%), Query Frame = 0
Query:  252 PSTGT--GKSSLLLYKTKGFTEADVDAVVDSYIMAWRSSPDDQLTGSFLSNFTDVLDALRIGGGGGGKYAFDHEQDVPYSSPQRPVPPHSPFSRPSSTRGESIVERGGGIGSGQNGTAVMGENDP-VSRLKKLGAEVFEKATEEELDWTCLAGYESIKAEVEDTVVMALQHAEAYDAIARQTRERYESNRPRAVLFEGPPGTGKTLTARIIASRTEVPLVFISTERVLSKWYGDSEKNLAKVFEACKELGGAIIFIDEVDALAASRDT-NMHEATRRLLSVILQSIEGFRGRNKNVLICATNRKQDLDSALLSRFDVSIKFDLPTCPARQAIFARYAKHLAGNELARLAEASEAYSCRDIKEVCENTERKWASKTIRGQADGLTPPLKEYLN 640
            PSTG   GK S+ LY+  GFT+ D+ A+V  Y  AW       L G                            +DV Y          +P    ++                   +AV G       +L++LG EVF+KAT E   W  LAGY  +K E+EDT+++ L+H E YD IAR+TR ++ESNRPRAVLFEGPPGTGKT++AR+IA R++ P+V +  E ++SKWYG+SEK L+ +F+AC E+GGAIIFIDEVDALA SR T  MHEATRR+LSVILQ +EGF   +KN+LICATNRK DLD+AL+SRF +SI+F LP    R+ +F  YAK L+ +EL  LA  +   S RD+KE C++ ER+WASK +RGQ     P LKEY++
Sbjct:   14 PSTGPRGGKDSIHLYRDGGFTKQDLAALVQGYQEAWSG-----LNG----------------------------RDVSYRF------VIAPGETATTXXXXXXXXXXXXXXXXXXSSAVPGSKAAGAEKLRQLGVEVFDKATGETPGWDSLAGYADVKQEIEDTLILPLRHPEVYDVIARKTRTQFESNRPRAVLFEGPPGTGKTVSARVIAGRSDRPMVHVPVENIMSKWYGESEKKLSAIFDACDEMGGAIIFIDEVDALAGSRSTGGMHEATRRVLSVILQKVEGFEKGSKNILICATNRKDDLDAALISRFQLSIQFGLPDATTRREVFGLYAKQLSQHELQTLATITAGMSGRDMKETCQHAERRWASKLVRGQETSELPSLKEYVD 366          
BLAST of NO19G01970 vs. NCBI_GenBank
Match: XP_009515911.1 (hypothetical protein PHYSODRAFT_474252 [Phytophthora sojae] >EGZ28636.1 hypothetical protein PHYSODRAFT_474252 [Phytophthora sojae])

HSP 1 Score: 325.5 bits (833), Expect = 3.900e-85
Identity = 165/304 (54.28%), Postives = 217/304 (71.38%), Query Frame = 0
Query:  359 IGSGQNGTAVM-----GENDPVSRLKKLGAEVFEKA-TEEELDWTCLAGYESIKAEVEDTVVMALQHAEAYDAIARQTRERYESNRPRAVLFEGPPGTGKTLTARIIASRTEVPLVFISTERVLSKWYGDSEKNLAKVFEACKELGGAIIFIDEVDALAASRD-TNMHEATRRLLSVILQSIEGFRGRNKNVLICATNRKQDLDSALLSRFDVSIKFDLPTCPARQAIFARYAKHLAGNELARLAEASEAYSCRDIKEVCENTERKWASKTIRGQADGLTPPLKEYLNQLKAQT--LSDHQTLP 654
            +G G+N T         + + + +L+ LG +VFE    E  L W  LAGYE +K E+EDTVV+ALQ+ E Y+ IA++TR RYESNRPRAVLFEGPPGTGKTL+ARIIA +  +P++ I  E V+SKWYGDSEK ++ +F+AC++L GAIIFIDE+DALA  R    MHEA+RR+LSV+LQ +EGF    K  ++CATNRKQDLD+AL+SRFD+SI+++LP    R+A+FARYAK L+ +EL +LA  S   SCRDIKE+CE  ERKWASK ++ +     P LK Y+  +K     LS H + P
Sbjct:  274 VGRGRNPTTATSAPLDSKEEAIQQLQGLGIDVFEPTQNENSLTWDSLAGYEKVKLEIEDTVVLALQNPELYERIAQKTRCRYESNRPRAVLFEGPPGTGKTLSARIIAQQAGIPMIHIPIESVVSKWYGDSEKKMSAIFDACEKLDGAIIFIDEIDALAGDRSGGTMHEASRRILSVLLQKVEGFASAKKTTVVCATNRKQDLDAALISRFDLSIRYNLPDEKTRRAVFARYAKQLSDDELGQLATISPQLSCRDIKEICEYAERKWASKVLKKEETTELPTLKTYMEAVKTHMGGLSSHDSQP 577          
BLAST of NO19G01970 vs. NCBI_GenBank
Match: XP_024578476.1 (aaa-type atpase family protein [Plasmopara halstedii] >CEG42107.1 aaa-type atpase family protein [Plasmopara halstedii])

HSP 1 Score: 323.2 bits (827), Expect = 1.900e-84
Identity = 165/304 (54.28%), Postives = 213/304 (70.07%), Query Frame = 0
Query:  359 IGSGQN-----GTAVMGENDPVSRLKKLGAEVFEKA-TEEELDWTCLAGYESIKAEVEDTVVMALQHAEAYDAIARQTRERYESNRPRAVLFEGPPGTGKTLTARIIASRTEVPLVFISTERVLSKWYGDSEKNLAKVFEACKELGGAIIFIDEVDALAASRD-TNMHEATRRLLSVILQSIEGFRGRNKNVLICATNRKQDLDSALLSRFDVSIKFDLPTCPARQAIFARYAKHLAGNELARLAEASEAYSCRDIKEVCENTERKWASKTIRGQADGLTPPLKEYLNQLKAQT--LSDHQTLP 654
            +G G+N      TA+      + +L+ LG +VFE   +E+ L W  LAGYE +KAE+EDT+V+ALQ+ E Y+ IA +TR RYESNRPRAVLFEGPPGTGKTL+ARIIA +  +P+V +  E V+SKWYGDSEK ++ +F+AC++L GAIIFIDE+DALA  R    MHEA+RR+LSV+LQ +EGF    K  ++CATNRKQDLD+AL+SRFD+SI++DLP    R+A+F RYAK L+  EL  +A  S   SCRDIKE+CE  ERKWASK +R       P  + YL  +K     LS H   P
Sbjct:  203 MGHGKNSAIPGSTALDNRELAIQKLQNLGIDVFEPTHSEDSLSWESLAGYEKVKAEIEDTIVLALQNPELYERIAEKTRCRYESNRPRAVLFEGPPGTGKTLSARIIAQQAGIPMVHLPIESVVSKWYGDSEKKMSAIFDACEKLDGAIIFIDEIDALAGDRSGGTMHEASRRILSVLLQKVEGFASAKKTTVVCATNRKQDLDAALISRFDLSIRYDLPDKKTRRAVFGRYAKQLSDEELQHMAAVSSHLSCRDIKEICEYAERKWASKVLRKTETSEVPDTQAYLEAIKIHINGLSSHGPHP 506          
BLAST of NO19G01970 vs. NCBI_GenBank
Match: XP_002906803.1 (ATPase [Phytophthora infestans T30-4] >EEY66204.1 ATPase [Phytophthora infestans T30-4])

HSP 1 Score: 321.6 bits (823), Expect = 5.600e-84
Identity = 162/295 (54.92%), Postives = 213/295 (72.20%), Query Frame = 0
Query:  355 RGGGIGSGQNGT-----AVMGENDPVSRLKKLGAEVFEKA-TEEELDWTCLAGYESIKAEVEDTVVMALQHAEAYDAIARQTRERYESNRPRAVLFEGPPGTGKTLTARIIASRTEVPLVFISTERVLSKWYGDSEKNLAKVFEACKELGGAIIFIDEVDALAASRD-TNMHEATRRLLSVILQSIEGFRGRNKNVLICATNRKQDLDSALLSRFDVSIKFDLPTCPARQAIFARYAKHLAGNELARLAEASEAYSCRDIKEVCENTERKWASKTIRGQADGLTPPLKEYLNQLK 643
            R   IG G+N T     A   + + + +L+ LG +VFE    E  L W  LAGYE +K E+EDTVV+ALQ+ E Y+ IA++TR RYESNRPRAVLFEGPPGTGKTL+ARIIA +  +P++ I  E V+SKWYGDSEK ++ +F+AC++L GAIIFIDE+DALA  R    MHEA+RR+LSV+LQ +EGF    K  ++CATNRKQDLD+AL+SRFD+SI+++LP    R+A+F RYAK L+  EL++LA  S   SCRDIKE+CE  ERKWASK ++ +     P L+ Y+  +K
Sbjct:  269 RNALIGRGRNSTIAPAAAADSKEEAIQQLQGLGIDVFEPTQNENSLTWDSLAGYEKVKLEIEDTVVLALQNPELYERIAQKTRCRYESNRPRAVLFEGPPGTGKTLSARIIAQQAGIPMIHIPIESVVSKWYGDSEKKMSAIFDACEKLDGAIIFIDEIDALAGDRSGGTMHEASRRILSVLLQKVEGFASAKKTTVVCATNRKQDLDAALISRFDLSIRYNLPDEKTRRAVFGRYAKQLSDEELSQLAAVSSQLSCRDIKEICEYAERKWASKVLKKEETAELPTLRTYMEAVK 563          
BLAST of NO19G01970 vs. NCBI_GenBank
Match: OWZ23712.1 (ATPase [Phytophthora megakarya])

HSP 1 Score: 321.6 bits (823), Expect = 5.600e-84
Identity = 164/304 (53.95%), Postives = 218/304 (71.71%), Query Frame = 0
Query:  359 IGSGQNGT-----AVMGENDPVSRLKKLGAEVFEKA-TEEELDWTCLAGYESIKAEVEDTVVMALQHAEAYDAIARQTRERYESNRPRAVLFEGPPGTGKTLTARIIASRTEVPLVFISTERVLSKWYGDSEKNLAKVFEACKELGGAIIFIDEVDALAASRD-TNMHEATRRLLSVILQSIEGFRGRNKNVLICATNRKQDLDSALLSRFDVSIKFDLPTCPARQAIFARYAKHLAGNELARLAEASEAYSCRDIKEVCENTERKWASKTIRGQADGLTPPLKEYLNQLKAQT--LSDHQTLP 654
            +G G+N T     A   + + + +L+ LG +VFE    E  L W  LAGYE +K E+EDTVV+ALQ+ E Y+ IA++TR RYESNRPRAVLFEGPPGTGKTL+ARIIA +  +P++ I  E V+SKWYGDSEK ++ +F+AC++L GAIIFIDE+DALA  R    MHEA+RR+LSV+LQ +EGF    K  ++CATNRKQDLD+AL+SRFD+SI+++LP    R+A+FARYAK L+  EL +LA  S   SCRDIKE+CE  ERKWASK ++ +     P L+ Y++ +K     +S H + P
Sbjct:  277 VGRGRNPTTATAAAPDSKEEAIQQLQGLGIDVFEPTQNENSLTWDSLAGYEKVKLEIEDTVVLALQNPELYERIAQKTRCRYESNRPRAVLFEGPPGTGKTLSARIIAQQAGIPMIHIPIESVVSKWYGDSEKKMSAIFDACEKLDGAIIFIDEIDALAGDRSGGTMHEASRRILSVLLQKVEGFASAKKTTVVCATNRKQDLDAALISRFDLSIRYNLPDENTRRAVFARYAKQLSDEELLQLAAVSPQLSCRDIKEICEYAERKWASKVLKKEETTELPTLQTYMDAVKTHIGGVSSHGSQP 580          
BLAST of NO19G01970 vs. NCBI_GenBank
Match: KUF64619.1 (Diatom spindle kinesin-1 [Phytophthora nicotianae])

HSP 1 Score: 320.9 bits (821), Expect = 9.500e-84
Identity = 162/295 (54.92%), Postives = 212/295 (71.86%), Query Frame = 0
Query:  355 RGGGIGSGQNGTAVM-----GENDPVSRLKKLGAEVFEKA-TEEELDWTCLAGYESIKAEVEDTVVMALQHAEAYDAIARQTRERYESNRPRAVLFEGPPGTGKTLTARIIASRTEVPLVFISTERVLSKWYGDSEKNLAKVFEACKELGGAIIFIDEVDALAASRD-TNMHEATRRLLSVILQSIEGFRGRNKNVLICATNRKQDLDSALLSRFDVSIKFDLPTCPARQAIFARYAKHLAGNELARLAEASEAYSCRDIKEVCENTERKWASKTIRGQADGLTPPLKEYLNQLK 643
            R    G G+N TA        + + + +L+ LG +VFE    E  L W  LAGYE +K E+EDTVV+ALQ+ E Y+ IAR+TR RYESNRPRAVLFEGPPGTGKTL+ARIIA +  +P++ I  E V+SKWYGDSEK ++ +F+AC++L GAIIFIDE+DALA  R    MHEA+RR+LSV+LQ +EGF    K  ++CATNRKQDLD+AL+SRFD+SI+++LP    R+A+F RYAK L+  EL++LA  S   SCRDIKE+CE  ERKWASK ++ +     P L+ Y+  +K
Sbjct:  948 RNALFGRGRNATAATVAPPDSKEEAIQQLQGLGIDVFEPTQNENSLTWDSLAGYEKVKLEIEDTVVLALQNPELYERIARKTRCRYESNRPRAVLFEGPPGTGKTLSARIIAQQAGIPMIHIPIESVVSKWYGDSEKKMSAIFDACEKLDGAIIFIDEIDALAGDRSGGTMHEASRRILSVLLQKVEGFASAKKTTVVCATNRKQDLDAALISRFDLSIRYNLPDEKTRRAVFGRYAKQLSEEELSQLAAVSSQLSCRDIKEICEYAERKWASKVLKKEETTELPTLQTYMEAVK 1242          
The following BLAST results are available for this feature:
BLAST of NO19G01970 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM23692.16.000e-18765.64aaa-type atpase family protein [Nannochloropsis ga... [more]
CCA14155.11.200e-8657.09ATPase putative [Albugo laibachii Nc14][more]
XP_008874165.11.700e-8557.72hypothetical protein H310_09784 [Aphanomyces invad... [more]
XP_008874166.11.700e-8557.72hypothetical protein, variant 1 [Aphanomyces invad... [more]
CBN79434.12.300e-8546.68conserved unknown protein [Ectocarpus siliculosus][more]
XP_009515911.13.900e-8554.28hypothetical protein PHYSODRAFT_474252 [Phytophtho... [more]
XP_024578476.11.900e-8454.28aaa-type atpase family protein [Plasmopara halsted... [more]
XP_002906803.15.600e-8454.92ATPase [Phytophthora infestans T30-4] >EEY66204.1 ... [more]
OWZ23712.15.600e-8453.95ATPase [Phytophthora megakarya][more]
KUF64619.19.500e-8454.92Diatom spindle kinesin-1 [Phytophthora nicotianae][more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL012nonsL012Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR034ncniR034Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR039ngnoR039Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK004538NSK004538Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO19G01970.1NO19G01970.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|599301gene_7598Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100030g14gene6758Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO19G01970.1NO19G01970.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO19G01970 ID=NO19G01970|Name=NO19G01970|organism=Nannochloropsis oceanica|type=gene|length=1971bp
ATGCTCCACCAGCGGAAAGCGGCGATGGCAGCCGCCGCTGCCGGCGCGTG
CCGCAGCATTCGCAGCGTCGCATCGACCTTGCCCTCCTCTTCGCTCTCGA
CACGCATCTATTTTATGGACCACCCGCCGCTCCACACCGCGCGCCCCGCG
TCTATGGCATCCTCTTCTTCGTCGTCTAATGCTTGGCTGCCAGCCGCGCT
GGTGGCCGTGGCAACTGCTTCCGTCCTGACGTCGCTGACAGAGGCAGCGC
CACCTACAGCGGCGGCGTCGGCACCGGACAGCAGCGACGACACCAAAGAT
AATTCAAAGGAAAATGTGTTGCCTATGCGAGAGGTCATGGCATTGATCGA
AAGCCGGCTGAAGCCCTTTCGCACGGAGCGCTTCCTTTCTTCTCGACCTC
GCAGAAGTAGCAGAAGCGGCAGCGGTACATTTCCTCCTACCGTCGGGGAG
CACGACCTCCCCACCGTTGCCAGCAAAACTTTCCCCAAAATCGCCGTGTT
GAGCAAGGGCAAGGGCGTGGATGAGCCCTACACCATCGAAGTTCCCTTGC
CGCCAACGGCCAGTAGGGAAACAAATGTGCTCGCAGCCTGCCTACATGCC
TTGCAGAAGAAGGGGCACACGCTCACGTTCCACACGGGCTTGACCACAAA
CAATGGAACCAGCCTTTCCTTCGTCTTCGGCGACCAGTCCGGATCCGTCC
TTCTGACCTCTTCGTCGGCTGTCGCGGCGCCATCATCGTCGACTGAGGTG
ATGCCATCGACAGGGACAGGCAAATCAAGCCTCCTTCTGTACAAGACCAA
GGGCTTTACAGAAGCGGACGTAGACGCGGTTGTTGATTCGTACATCATGG
CTTGGAGGAGCAGCCCAGACGATCAGCTCACCGGCTCATTCCTCAGCAAT
TTTACGGATGTCCTAGATGCGCTCCGTATTGGTGGCGGCGGTGGTGGCAA
ATACGCATTTGATCACGAGCAGGACGTCCCTTACTCGTCCCCTCAGCGCC
CCGTCCCACCACATTCCCCCTTTTCCCGGCCGTCCTCGACCCGCGGGGAA
AGCATAGTTGAGCGAGGCGGCGGTATCGGGAGCGGGCAGAATGGCACTGC
TGTGATGGGAGAAAACGACCCGGTGTCCAGGCTAAAGAAGCTTGGCGCGG
AGGTGTTCGAAAAGGCGACGGAAGAGGAACTGGACTGGACTTGCCTAGCG
GGATACGAGAGCATCAAGGCTGAGGTAGAGGATACAGTAGTCATGGCCTT
GCAGCACGCCGAGGCCTACGATGCTATTGCCCGTCAGACCCGCGAGCGTT
ATGAGAGTAATCGCCCAAGGGCCGTTCTTTTTGAGGGCCCTCCAGGGACG
GGCAAGACATTGACCGCTCGCATCATTGCTAGCCGTACGGAGGTGCCGTT
GGTCTTCATTTCAACAGAGCGCGTCCTCAGTAAATGGTATGGCGATTCGG
AGAAGAATTTGGCGAAGGTTTTCGAGGCATGCAAAGAACTGGGAGGGGCT
ATCATCTTTATTGACGAAGTAGACGCGTTGGCTGCCAGCCGAGACACTAA
CATGCACGAGGCTACGAGGCGTCTCCTTAGTGTCATACTGCAGAGTATCG
AGGGCTTTAGAGGCCGCAACAAAAACGTGCTCATATGCGCCACCAACCGC
AAGCAAGACCTCGATTCGGCCTTACTTTCTCGATTTGACGTATCCATCAA
GTTTGACCTGCCCACATGCCCTGCCCGTCAGGCGATCTTTGCCCGGTACG
CAAAACATTTGGCCGGGAATGAGCTAGCCCGTCTGGCGGAGGCTTCCGAA
GCCTACTCCTGCAGGGATATTAAGGAGGTGTGTGAAAATACGGAGCGGAA
GTGGGCTTCCAAAACCATTCGTGGACAAGCGGACGGCCTCACACCGCCAC
TCAAGGAGTACCTCAATCAACTCAAAGCGCAGACCCTTTCCGATCATCAA
ACCCTGCCTCATAACGTTTAA
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protein sequence of NO19G01970.1

>NO19G01970.1-protein ID=NO19G01970.1-protein|Name=NO19G01970.1|organism=Nannochloropsis oceanica|type=polypeptide|length=657bp
MLHQRKAAMAAAAAGACRSIRSVASTLPSSSLSTRIYFMDHPPLHTARPA
SMASSSSSSNAWLPAALVAVATASVLTSLTEAAPPTAAASAPDSSDDTKD
NSKENVLPMREVMALIESRLKPFRTERFLSSRPRRSSRSGSGTFPPTVGE
HDLPTVASKTFPKIAVLSKGKGVDEPYTIEVPLPPTASRETNVLAACLHA
LQKKGHTLTFHTGLTTNNGTSLSFVFGDQSGSVLLTSSSAVAAPSSSTEV
MPSTGTGKSSLLLYKTKGFTEADVDAVVDSYIMAWRSSPDDQLTGSFLSN
FTDVLDALRIGGGGGGKYAFDHEQDVPYSSPQRPVPPHSPFSRPSSTRGE
SIVERGGGIGSGQNGTAVMGENDPVSRLKKLGAEVFEKATEEELDWTCLA
GYESIKAEVEDTVVMALQHAEAYDAIARQTRERYESNRPRAVLFEGPPGT
GKTLTARIIASRTEVPLVFISTERVLSKWYGDSEKNLAKVFEACKELGGA
IIFIDEVDALAASRDTNMHEATRRLLSVILQSIEGFRGRNKNVLICATNR
KQDLDSALLSRFDVSIKFDLPTCPARQAIFARYAKHLAGNELARLAEASE
AYSCRDIKEVCENTERKWASKTIRGQADGLTPPLKEYLNQLKAQTLSDHQ
TLPHNV*
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Synonyms
Publications