NO19G01910, NO19G01910 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO19G01910 vs. NCBI_GenBank
Match: XP_011398455.1 (RNA/RNP complex-1-interacting phosphatase [Auxenochlorella protothecoides] >KFM25559.1 RNA/RNP complex-1-interacting phosphatase [Auxenochlorella protothecoides]) HSP 1 Score: 146.0 bits (367), Expect = 2.200e-31 Identity = 77/192 (40.10%), Postives = 105/192 (54.69%), Query Frame = 0 Query: 72 VLQKITKWKDYTNYGQPLGNSRVIPMKTPLPLDLQRHHFPTSPSSSAVLHKDAESEAHVHTIGKFVKEQADLGRNVGLVVDLSNHSCLYEDDLSRDCPLVKYEHFFFVAKEIPSHAICQRVNQCITAYVLANPQDYVAIHCSYGWNRTGFVCATYLVEELHYGASQALAAFTSARSPGIRHEHFISEFLSRY 264 VL K+ KW +Y G+P+G +R +PMKTP+ ++ P AH T+ + V+ QA GR VG ++DL+NH CLY DL P +++ VAK IP A V A+ P DYVAIHC+YG+NRTGFV +YL + G ALAAF +AR PG++H F++E RY Sbjct: 52 VLTKLQKWGEYRAVGEPVGPTRFLPMKTPMSEEIMDSWSLPQPC------------AHPLTVARLVEGQAARGRRVGAIIDLANHECLYGADLP---PGLRHIEVQLVAKVIPPRAAVDAVAAAAAAFWAERPDDYVAIHCAYGFNRTGFVLCSYLCQVHDMGVEDALAAFAAARPPGVKHPAFVAELHRRY 228
BLAST of NO19G01910 vs. NCBI_GenBank
Match: XP_003079046.2 (Protein-tyrosine phosphatase, active site [Ostreococcus tauri] >CEF97757.1 Protein-tyrosine phosphatase, active site [Ostreococcus tauri]) HSP 1 Score: 142.5 bits (358), Expect = 2.500e-30 Identity = 78/201 (38.81%), Postives = 112/201 (55.72%), Query Frame = 0 Query: 66 DYAVAKVLQKITKWKDYTNYGQPLGNSRVIPMKTPLPLDLQRHHFPTSPSSSAVLHKDAESEAHVHTIGKFVKEQADLGRNVGLVVDLSNHSCLYEDDLSRDCPLVKYEHFFFVAKEIPSHAICQRVNQCITAYVL--ANPQDYVAIHCSYGWNRTGFVCATYLVEELHYGASQALAAFTSARSPGIRHEHFISEFLSRYS 265 D VL+K+ KW DY + G + +++IPMKTPL SA +D AH T+ ++EQ LGR +GL+VDL+NH CLYE+D+ V H VAK +PS C+R ++ + ++ A YVA+HC+YG+NRTGF+ +LVE L +AL F AR PG++H+HF E + RY+ Sbjct: 75 DAEAPSVLKKLQKWGDYESCGDVVRGTKLIPMKTPL---------------SARYVED--RCAHALTMDILLREQRALGREIGLIVDLTNHDCLYEEDVPAS---VSRTHVRNVAKTVPSVGDCRRASKVVNDFLSSDAGKDRYVAVHCAYGFNRTGFMICCHLVETLGVSPEEALELFAEARPPGLKHQHFRCELIERYA 255
BLAST of NO19G01910 vs. NCBI_GenBank
Match: OUS49681.1 (mRNA capping enzyme, guanylyltransferase subunit [Ostreococcus tauri]) HSP 1 Score: 142.5 bits (358), Expect = 2.500e-30 Identity = 78/201 (38.81%), Postives = 112/201 (55.72%), Query Frame = 0 Query: 66 DYAVAKVLQKITKWKDYTNYGQPLGNSRVIPMKTPLPLDLQRHHFPTSPSSSAVLHKDAESEAHVHTIGKFVKEQADLGRNVGLVVDLSNHSCLYEDDLSRDCPLVKYEHFFFVAKEIPSHAICQRVNQCITAYVL--ANPQDYVAIHCSYGWNRTGFVCATYLVEELHYGASQALAAFTSARSPGIRHEHFISEFLSRYS 265 D VL+K+ KW DY + G + +++IPMKTPL SA +D AH T+ ++EQ LGR +GL+VDL+NH CLYE+D+ V H VAK +PS C+R ++ + ++ A YVA+HC+YG+NRTGF+ +LVE L +AL F AR PG++H+HF E + RY+ Sbjct: 75 DAEAPSVLKKLQKWGDYESCGDVVRGTKLIPMKTPL---------------SARYVED--RCAHALTMDILLREQRALGREIGLIVDLTNHDCLYEEDVPAS---VSRTHVRNVAKTVPSVGDCRRASKVVNDFLSSDAGKDRYVAVHCAYGFNRTGFMICCHLVETLGVSPEEALELFAEARPPGLKHQHFRCELIERYA 255
BLAST of NO19G01910 vs. NCBI_GenBank
Match: KDD76743.1 (hypothetical protein H632_c121p1 [Helicosporidium sp. ATCC 50920]) HSP 1 Score: 136.0 bits (341), Expect = 2.300e-28 Identity = 78/233 (33.48%), Postives = 113/233 (48.50%), Query Frame = 0 Query: 55 RGQDSVNDNPPDYAVAK------------------VLQKITKWKDYTNYGQPLGNSRVIPMKTPLPLD-LQRHHFPTSPSSSAVLHKDAESEAHVHTIGKFVKEQADLGRNVGLVVDLSNHSCLYEDDLSRDCPLVKYEHFFFVAKEIPSHAICQRVNQCITAYVLANPQDYVAIHCSYGWNRTGFVCATYLVEELHYGASQALAAFTSARSPGIRHEHFISEFLSRYSDSGG 269 RG +S NPP A VL K+ KW Y + G P+ +R +PMKTP+ + L P P H ++ + E GR +GL++DL+NH CLY DDL D V + AK +P+ + +V + A P+ +VAIHC+YG+NRTGFV +YL +E +AL +F +AR PG++HE F++E RY + G Sbjct: 4 RGVESFGFNPPQEAEPSLSVTEADQWPIQSEEQPTVLSKLQKWGSYPSLGLPVYPTRFLPMKTPMSEEILSNWSLPEPPQ-------------HTLSVRSLLAETRQAGRPLGLIIDLANHDCLYADDLPAD---VAHSQVALEAKVLPTQSAVDQVARLAQACWAERPEGHVAIHCAYGFNRTGFVVCSYLCQEEGLSVDEALQSFAAARPPGVKHEKFVAELYRRYGHAEG 220
BLAST of NO19G01910 vs. NCBI_GenBank
Match: XP_003059350.1 (predicted protein [Micromonas pusilla CCMP1545] >EEH56482.1 predicted protein [Micromonas pusilla CCMP1545]) HSP 1 Score: 135.6 bits (340), Expect = 3.000e-28 Identity = 78/200 (39.00%), Postives = 104/200 (52.00%), Query Frame = 0 Query: 69 VAKVLQKITKWKDYTNYGQPLGNSRVIPMKTPLPLDLQRHHFPTSPSSSAVLHKDAESEAHVHTIGKFVKEQAD-LGRNVGLVVDLSNHSCLYEDDLSRDCPLVKYEHFFFVAKEIPSHAICQRVNQCITAYVLANPQDYVAIHCSYGWNRTGFVCATYLVEELHYGASQALAAFTSARSPGIRHEHFISEFLSRYSDSG 268 V VL K+ KW DY ++G+P S+ IPMKTPL L R ++ +V + F+ EQ + GR+VGLV+DLSNH CLY D + V H VAK +P A V + + P +VAIHC+YG+NRTGFV YL+E A ALA+F +AR PG++H+ F RY G Sbjct: 55 VPTVLSKLRKWGDYASFGEPALPSKFIPMKTPLSPTLLRE----------------DTFENVLLLPNFLAEQRESRGRDVGLVIDLSNHDCLYGDGIPEGLERV---HVRNVAKSVPDIACTSEVIAVASEFWSRRPNAFVAIHCAYGFNRTGFVLCCYLIEACGLSADDALASFAAARPPGVKHDRFKVALRRRYPTPG 235
BLAST of NO19G01910 vs. NCBI_GenBank
Match: XP_013902868.1 (hypothetical protein MNEG_4115 [Monoraphidium neglectum] >KIZ03849.1 hypothetical protein MNEG_4115 [Monoraphidium neglectum]) HSP 1 Score: 132.1 bits (331), Expect = 3.300e-27 Identity = 82/239 (34.31%), Postives = 109/239 (45.61%), Query Frame = 0 Query: 49 VQPQAARGQDSVNDNPPDYAVAKVLQKITKWKDYTNYGQPLGNSRVIPMKTPLPLD-LQRHHFPTSPSSSAVLHKDAESEAHVHTIGKFVKEQADLGRNVGLVVDLSNHSCLYEDDLSRDCPLVKYEHFFFVAKEIPSHAICQRVNQCITAYVLANPQDYVAIHCSY---------------------------------GWNRTGFVCATYLVEELHYGASQALAAFTSARSPGIRHE 254 V P GQ V VL K+ KW DY + GQP+G +R++PMKTPL + L P P H TI + + QA GR +G +VDLSNH CLYE DL ++Y H +AKE+PSH RV + + +P +++ IHC+Y G+NRTGFV A+ LVE + AL AF AR PG++HE Sbjct: 11 VDPDCYPGQPETESASVVGGVPTVLSKLQKWGDYDSVGQPVGPTRLLPMKTPLSKEILSDWQLPEPPK-------------HSLTIEQLLSTQAAAGRRIGCIVDLSNHDCLYESDLPP--AGLEYRHLHCIAKELPSHECIARVAAVVRDFFSRHPNEFIGIHCAYVSRGRTLAPAPAGGDGTAPCPDASRSLPPPAPAGFNRTGFVVASLLVECWGLPVAAALDAFARARPPGVKHE 234
BLAST of NO19G01910 vs. NCBI_GenBank
Match: XP_001417375.1 (predicted protein, partial [Ostreococcus lucimarinus CCE9901] >ABO95668.1 predicted protein, partial [Ostreococcus lucimarinus CCE9901]) HSP 1 Score: 119.8 bits (299), Expect = 1.700e-23 Identity = 66/185 (35.68%), Postives = 98/185 (52.97%), Query Frame = 0 Query: 78 KWKDYTNYGQPLGNSRVIPMKTPLPLDLQRHHFPTSPSSSAVLHKDAESEAHVHTIGKFVKEQADLGRNVGLVVDLSNHSCLYEDDLSRDCPLVKYEHFFFVAKEIPSHAICQRVNQCITAYV--LANPQDYVAIHCSYGWNRTGFVCATYLVEELHYGASQALAAFTSARSPGIRHEHFISEFL 261 KW DY + G + +R+IPMKTPL SP E+ + T+ ++ Q GR +GL++DL+NH CLYEDD+ D V H VAK +PS + ++ + ++ N Y+A+HC+YG+NRTGFV YLV+ ++A+ F AR PG++H HF E + Sbjct: 1 KWGDYESCGDVVRGTRLIPMKTPL-----------SP------RYVEENCVNALTMESLMRGQRARGREIGLIIDLTNHDCLYEDDIPSDVARV---HVRNVAKAVPSASDVRKATEAANKFLATAGNENKYIAVHCAYGFNRTGFVICCYLVQMFGATPAEAMELFAEARPPGLKHLHFRHELV 165
BLAST of NO19G01910 vs. NCBI_GenBank
Match: KXZ47816.1 (hypothetical protein GPECTOR_32g428 [Gonium pectorale]) HSP 1 Score: 100.1 bits (248), Expect = 1.400e-17 Identity = 69/195 (35.38%), Postives = 91/195 (46.67%), Query Frame = 0 Query: 147 VGLVVDLSNHSCLYEDDLSRDCPLVKYEHFFFVAKEIPSHAICQRVNQCITAYVLANPQDYVAIHCSY--------------------GWNRTGFVCATYLVEELHYGASQALAAFTSARSPGIRHEHFISEFLSRYSDSGGDAV--GMTG----ERSVVG-QETGEEKGTVLLGAQTEGNGRETNNETLGAVLG 315 VGL++DLSNH CLY D+ D V+Y H VAKE+P V + NP +Y+AIHC+Y G+NRTGFV YL+E ALAAF +R PG++HE F +E RY G A GM G E S G + G + LG G G+ T+ +++G Sbjct: 2 VGLLLDLSNHDCLYTADIPPD---VRYLHIQLVAKELPPPDFVDAVVAAANRFWQDNPDEYIAIHCAYGVGGAVRLDRACGAAVFGGGGYNRTGFVLCCYLIEMCGLSVEDALAAFADSRPPGVKHEQFRAELHRRYGAVHGAAALYGMCGSPPDENSSFGCSPSCGSLGDLGLGPSPGGQGQLMRRATVESLMG 193
BLAST of NO19G01910 vs. NCBI_GenBank
Match: XP_002677052.1 (hypothetical protein NAEGRDRAFT_49289 [Naegleria gruberi] >EFC44308.1 hypothetical protein NAEGRDRAFT_49289 [Naegleria gruberi]) HSP 1 Score: 97.8 bits (242), Expect = 6.900e-17 Identity = 69/234 (29.49%), Postives = 98/234 (41.88%), Query Frame = 0 Query: 72 VLQKITKWKDYTNYGQPLGNSRVIPMKTPL------------PLDLQRHHFPTSPSSSAVLH----------KDAES-------EAHVHTIGKFV---KEQADLGRNVGLVVDLSNHSCLYED----------DLSRDCPLVKYEHFFFVAKEIPSHAICQRVNQCITAYVLANPQDYVAIHCSYGWNRTGFVCATYLVEELHYGASQALAAFTSARSPGIRHEHFISEFLSRY 264 VLQKI+KW N+G PL + +IP+KTP+ P + F S V D +S E + IGK +E+ D + + SC+Y++ D + PL Y VAKEIP N I + P Y+ +HCSYG+NRTGF+C +YL+ E +AL F ++ PGI+H F+ RY Sbjct: 109 VLQKISKWSGLDNFGTPLEPTHIIPLKTPIKTKFLESTKKWRPFTTEDFLFGNLKSGYCVAGIVDLSNHDCIYDVDSVCSPKNPEQFLKEIGKLYFKDEEEKDTLLKYVITSPILRKSCIYDNFTSDEIRNVIDNTETIPLT-YIKVRLVAKEIPGEEQQVDFNHVINDFFEKFPSHYIGVHCSYGFNRTGFICCSYLISERAIPIDEALNIFAKSKPPGIKHHWFLKALRKRY 341
BLAST of NO19G01910 vs. NCBI_GenBank
Match: XP_001700831.1 (predicted protein [Chlamydomonas reinhardtii]) HSP 1 Score: 95.9 bits (237), Expect = 2.600e-16 Identity = 70/232 (30.17%), Postives = 102/232 (43.97%), Query Frame = 0 Query: 28 RYGHAHEQHKSHPKLESTH--TPVQPQAARGQDSVNDNPPDYAVAKVLQKITKWKDYTNYGQPLGNSRVIPMKTPLPLD---LQRHHFPTSPSSSAVLHKDAESEAHVHTIGKFVKEQADLGRNVGLVVDLSNHSCLYEDDLSRDCPLVKYEHFFFVAKEIPSHAICQRVNQCITAYVLANPQDYVAIHCSYGWNRTGFVCATYLVE-----ELHYGASQALAAFTSARSPG 250 ++ H +QH P S + +P A+ + D PP ++ LQ + P+ + P + PL L P P H T+ + V +QA GR +GL++DLSNH CLY DD+ D V+Y H VAKE+P V A+ +P Y+A+HC+YG+NRTGFV YL+E + G + L + S S G Sbjct: 65 QHNHRVQQHPRVPACASAAACSACRPAASGRTHTSRDAPPIRLLSSSLQ----------FSVPIFAAPPAPPPSQTPLSTEILDSWSLPAQPK-------------HRLTVPQMVADQAAAGRKIGLILDLSNHDCLYTDDVPPD---VQYIHIQLVAKELPPPDFVAEVVAAANAFWEQHPDLYIAVHCAYGFNRTGFVVCCYLIECCGLTARYSGYAGMLGDYVSGNSAG 270 The following BLAST results are available for this feature:
BLAST of NO19G01910 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO19G01910 ID=NO19G01910|Name=NO19G01910|organism=Nannochloropsis oceanica|type=gene|length=1895bpback to top protein sequence of NO19G01910.1 >NO19G01910.1-protein ID=NO19G01910.1-protein|Name=NO19G01910.1|organism=Nannochloropsis oceanica|type=polypeptide|length=349bpback to top Synonyms
Publications
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