NO19G01910, NO19G01910 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO19G01910 vs. NCBI_GenBank
Match: EWM23705.1 (Protein-tyrosine phosphatase [Nannochloropsis gaditana]) HSP 1 Score: 290.4 bits (742), Expect = 7.300e-75 Identity = 149/269 (55.39%), Postives = 175/269 (65.06%), Query Frame = 0 Query: 58 DSVNDNPPDYAVAKVLQKITKWKDYTNYGQPLGNSRVIPMKTPLPLDLQRHHFPTSPSS------------SAVLHKDAESEAHVHTIGKFVKEQADLGRNVGLVVDLSNHSCLYEDDLSRDCPLVKYEHFFFVAKEIPSHAICQRVNQCITAYVLANPQDYVAIHCSYGWNRTGFVCATYLVEELHYGASQALAAFTSARSPGIRHEHFISEFLSRYSDSGGDAVGMTGERSVVGQETGEEKGTVLLGAQTEGNGRETNNETLGAVLG 315 D+++ +VA VLQKITKWKDY NYG P+G SRVIPMKTPL L+LQ HFP + SS S + E++ VHTI KFV+EQA LGR +GLVVDLSNH CLYE+DL RDCP V YEHF FVAK IP C+ V +CIT Y+ NP+ YVAIHCSYGWNRTG++CA YLVEEL Y AS ALAAF AR PGI+HEHF+SEFL+RY++ G R+ A+T RE NNETLG LG Sbjct: 43 DTMSTTMLPQSVASVLQKITKWKDYANYGNPVGESRVIPMKTPLTLELQGAHFPPATSSSPSHTPNTEVTGSGEISSKPEADFQVHTIQKFVQEQAILGRTIGLVVDLSNHECLYEEDLKRDCPHVSYEHFLFVAKNIPDRNGCRDVGRCITGYLAGNPEHYVAIHCSYGWNRTGYICAAYLVEELRYTASDALAAFAQARPPGIKHEHFLSEFLARYTEKTEKPPRQEGARTKSASSV----------AETARGQREINNETLGPSLG 301
BLAST of NO19G01910 vs. NCBI_GenBank
Match: XP_002503769.1 (predicted protein [Micromonas commoda] >ACO65027.1 predicted protein [Micromonas commoda]) HSP 1 Score: 160.2 bits (404), Expect = 1.100e-35 Identity = 95/238 (39.92%), Postives = 124/238 (52.10%), Query Frame = 0 Query: 41 KLESTHTPVQPQAARGQDS----------VNDNPPDYAVAKVLQKITKWKDYTNYGQPLGNSRVIPMKTPLPLDLQRHHFPTSPSSSAVLHKDA-ESEAHVHTIGKFVKEQADLGRNVGLVVDLSNHSCLYEDDLSRDCPLVKYEHFFFVAKEIPSHAICQRVNQCITAYVLANPQDYVAIHCSYGWNRTGFVCATYLVEELHYGASQALAAFTSARSPGIRHEHFISEFLSRYSDSG 268 K+ +P ++ G DS N + V VL K+ KW DY +YG+P+ SR IPMKTPL S +L KDA ES ++ T+ KF+ EQ LGR VGL++DLSNH CLY D + D V H VAK IP+ V + + P +YVAIHC+YG+NRTGFV YL++ L A +AL AF +AR PG++HE F RY G Sbjct: 24 KVADQEAQARPASSWGDDSCASTSTTSHVFNTAVTENNVPTVLSKLQKWGDYASYGEPVAPSRFIPMKTPL--------------SPTLLAKDAEESLPNILTLPKFLAEQRALGRKVGLIIDLSNHDCLYSDGVPPDLERV---HVRNVAKSIPNVECTDEVIAVASEFWSRRPDEYVAIHCAYGFNRTGFVLCCYLIQALGMSAERALEAFAAAREPGVKHERFREALRRRYPRPG 244
BLAST of NO19G01910 vs. NCBI_GenBank
Match: PSC69135.1 (RNA RNP complex-1-interacting phosphatase [Micractinium conductrix]) HSP 1 Score: 155.6 bits (392), Expect = 2.800e-34 Identity = 84/217 (38.71%), Postives = 118/217 (54.38%), Query Frame = 0 Query: 66 DYAVAKVLQKITKWKDYTNYGQPLGNSRVIPMKTPLPLD-LQRHHFPTSPSSSAVLHKDAESEAHVHTIGKFVKEQADLGRNVGLVVDLSNHSCLYEDDLSRDCPLVKYEHFFFVAKEIPSHAICQRVNQCITAYVLANPQDYVAIHCSYGWNRTGFVCATYLVEELHYGASQALAAFTSARSPGIRHEHFISEFLSRYSDSGGDAVGMTGERSVVG 282 D VL K+ KW DY G+P+ + +PMKTP+ + L P +P H T+ + + QA GR +GL++DL+NH CLY DD+ V+YEH VAK +PS V + +Y +P Y+AIHC+YG+NRTGFV +YL + QAL +F +AR PG++HE FI E +RY GG AV T + S++G Sbjct: 46 DSTTPSVLSKLQKWADYAAMGEPVWPTNFVPMKTPMSNEILDNWSLPEAP-------------RHALTVPRLLASQAAAGRQIGLIIDLANHDCLYSDDVPDS---VEYEHVQLVAKVLPSKQAIDEVERIANSYWAEHPTCYIAIHCAYGFNRTGFVVCSYLCQACGLSVEQALESFAAARPPGVKHEKFIRELHARY--GGGSAV--TPDGSLLG 242
BLAST of NO19G01910 vs. NCBI_GenBank
Match: XP_005649118.1 (hypothetical protein COCSUDRAFT_62003 [Coccomyxa subellipsoidea C-169] >EIE24574.1 hypothetical protein COCSUDRAFT_62003 [Coccomyxa subellipsoidea C-169]) HSP 1 Score: 153.7 bits (387), Expect = 1.100e-33 Identity = 77/194 (39.69%), Postives = 110/194 (56.70%), Query Frame = 0 Query: 70 AKVLQKITKWKDYTNYGQPLGNSRVIPMKTPLPLDLQRHHFPTSPSSSAVLHKDAESEAHVHTIGKFVKEQADLGRNVGLVVDLSNHSCLYEDDLSRDCPLVKYEHFFFVAKEIPSHAICQRVNQCITAYVLANPQDYVAIHCSYGWNRTGFVCATYLVEELHYGASQALAAFTSARSPGIRHEHFISEFLSRY 264 + VLQK+ KW DY +YG+P+G +R +PMKTP+ ++ + P HV TI K+Q + GR +GL++DLSNH LY DDL + ++Y H VAK P +V + +Y +P+ Y+AIHC+YG+NRTGFV YL++ ALA F +AR PG++HE F+ E RY Sbjct: 44 SSVLQKLQKWADYQSYGEPVGPTRFLPMKTPMSSEIIENWSLDEPPQ------------HVLTIQSLRKDQQEKGRTIGLIIDLSNHETLYADDL-QAVDGIQYTHIPLVAKSFPPANAITQVIKTAKSYWKEHPKKYIAIHCAYGFNRTGFVVCAYLIQVCRLSVLDALACFGAARPPGVKHEKFVVELSRRY 224
BLAST of NO19G01910 vs. NCBI_GenBank
Match: XP_007511550.1 (predicted protein [Bathycoccus prasinos] >CCO17671.1 predicted protein [Bathycoccus prasinos]) HSP 1 Score: 150.6 bits (379), Expect = 9.000e-33 Identity = 87/242 (35.95%), Postives = 128/242 (52.89%), Query Frame = 0 Query: 61 NDNPPDYAVAKVLQKITKWKDYTNYGQPLGNSRVIPMKTPLPLDLQRHHFPTSPSSSAVLHKDAESEAHVHTIGKFVKEQADL-GRNVGLVVDLSNHSCLYEDDLSRDCPLVKYEHFFFVAKEIPSHAICQRVNQCITAYVLANPQDYVAIHCSYGWNRTGFVCATYLVEELHYGASQALAAFTSARSPGIRHEHFISEFLSRYSDSG---------GDAVGMTGERSVVGQETGEEKGTVL 293 N + Y A VL K+ KW DY + G+ +G ++ +PMKTPL L+ + E AH+ T+ K + EQ + R V +++DLSNH CLYE+D+ ++ V H +AK IP+ C +V + T + +P+ Y+AIHC+YG+NRTGF+ +YL+E+ + A +AL AF AR PG++HE F +RY G GD E +V ET E VL Sbjct: 162 NTDQIPYEKATVLTKLQKWGDYESCGENVGKTKFVPMKTPLSLEFL---------------EQMEKYAHILTVEKMLYEQRETKQREVTMIIDLSNHECLYEEDIPKE---VHRVHVRNIAKSIPNIECCSKVMREATKHWKKHPEQYIAIHCAYGFNRTGFIVCSYLIEKENMTAEEALEAFAIARPPGVKHERFQLALKARYPTRGCKPKVTEYDGDEDDDKNENGLVKNETVEGVNAVL 385
BLAST of NO19G01910 vs. NCBI_GenBank
Match: PNW80478.1 (hypothetical protein CHLRE_07g319150v5 [Chlamydomonas reinhardtii]) HSP 1 Score: 149.4 bits (376), Expect = 2.000e-32 Identity = 87/223 (39.01%), Postives = 117/223 (52.47%), Query Frame = 0 Query: 68 AVAKVLQKITKWKDYTNYGQPLGNSRVIPMKTPLPLD-LQRHHFPTSPSSSAVLHKDAESEAHVHTIGKFVKEQADLGRNVGLVVDLSNHSCLYEDDLSRDCPLVKYEHFFFVAKEIPSHAICQRVNQCITAYVLANPQDYVAIHCSYGWNRTGFVCATYLVEELHYGASQALAAFTSARSPGIRHEHFISEFLSRYSDSGGDAVGMTGERSVVGQETGEEKG 290 +V VL K+ KW DY G P+ ++ +PMKTPL + L P P H T+ + V +QA GR +GL++DLSNH CLY DD+ D V+Y H VAKE+P V A+ +P Y+A+HC+YG+NRTGFV YL+E +AL AF +AR PG++HE F +E +RYS GM G+ V G G G Sbjct: 126 SVPTVLGKLQKWGDYVAVGAPVAPTKFVPMKTPLSTEILDSWSLPAQPK-------------HRLTVPQMVADQAAAGRKIGLILDLSNHDCLYTDDVPPD---VQYIHIQLVAKELPPPDFVAEVVAAANAFWEQHPDLYIAVHCAYGFNRTGFVVCCYLIECCGLTVDEALDAFATARPPGVKHEAFRAELQARYS----GYAGMLGD-YVSGNSAGHNGG 327
BLAST of NO19G01910 vs. NCBI_GenBank
Match: PRW20528.1 (RNA RNP complex-1-interacting phosphatase [Chlorella sorokiniana]) HSP 1 Score: 147.9 bits (372), Expect = 5.800e-32 Identity = 76/214 (35.51%), Postives = 111/214 (51.87%), Query Frame = 0 Query: 50 QPQAARGQDSVNDNPPDYAVAKVLQKITKWKDYTNYGQPLGNSRVIPMKTPLPLDLQRHHFPTSPSSSAVLHKDAESEAHVHTIGKFVKEQADLGRNVGLVVDLSNHSCLYEDDLSRDCPLVKYEHFFFVAKEIPSHAICQRVNQCITAYVLANPQDYVAIHCSYGWNRTGFVCATYLVEELHYGASQALAAFTSARSPGIRHEHFISEFLSRY 264 QP + + P VL K+ KW DY G P+ ++ IPMKTP+ ++ + P H T+ ++ QA GR VGL++DL+NH CLY DD+ ++YEH +AK +PS V + ++ +P Y+AIHC+YG+NRTGFV +YL + QAL +F +AR PG++HE FI E +RY Sbjct: 27 QPGSEAEPPGLETAQPADTTPTVLNKLQKWADYAAVGAPVWPTKFIPMKTPMSREILDNWSLAGPPK------------HPLTVPLLLEGQAAQGRTVGLIIDLANHDCLYSDDVP---DTIEYEHVQLIAKVLPSREAIDEVERIAASFWGEHPDQYIAIHCAYGFNRTGFVVCSYLCQACGLSVEQALESFAAARPPGVKHEKFIRELFARY 225
BLAST of NO19G01910 vs. NCBI_GenBank
Match: XP_002954283.1 (hypothetical protein VOLCADRAFT_118653 [Volvox carteri f. nagariensis] >EFJ44707.1 hypothetical protein VOLCADRAFT_118653, partial [Volvox carteri f. nagariensis]) HSP 1 Score: 147.5 bits (371), Expect = 7.600e-32 Identity = 78/199 (39.20%), Postives = 109/199 (54.77%), Query Frame = 0 Query: 68 AVAKVLQKITKWKDYTNYGQPLGNSRVIPMKTPLPLD-LQRHHFPTSPSSSAVLHKDAESEAHVHTIGKFVKEQADLGRNVGLVVDLSNHSCLYEDDLSRDCPLVKYEHFFFVAKEIPSHAICQRVNQCITAYVLANPQDYVAIHCSYGWNRTGFVCATYLVEELHYGASQALAAFTSARSPGIRHEHFISEFLSRYSD 266 +V VL K+ KW DY + G+ + ++ IPMKTPL + L P+ P H T+ + V +QA LGR VGL++DLSNH CLY DD+ P + Y H VAKE+P V + +P +Y+A+HC+YG+NRTGFV YL+E AL+AF +R PG++HE F +E RY + Sbjct: 70 SVPTVLTKLQKWGDYESVGRQVLPTKFIPMKTPLSAEILNSWSLPSQPK-------------HRLTVPEMVAQQAALGRKVGLLLDLSNHDCLYTDDIP---PWLTYRHIQLVAKELPPPEFVDTVVAVANKFWEKHPDEYIAVHCAYGFNRTGFVVCCYLIECCGLNVEAALSAFAESRPPGVKHEQFRNELHRRYGN 252
BLAST of NO19G01910 vs. NCBI_GenBank
Match: XP_005844578.1 (hypothetical protein CHLNCDRAFT_58853 [Chlorella variabilis] >EFN52476.1 hypothetical protein CHLNCDRAFT_58853 [Chlorella variabilis]) HSP 1 Score: 147.5 bits (371), Expect = 7.600e-32 Identity = 79/231 (34.20%), Postives = 121/231 (52.38%), Query Frame = 0 Query: 51 PQAARGQDSVNDNPPDYAVAKVLQKITKWKDYTNYGQPLGNSRVIPMKTPLPLDLQRHHFPTSPSSSAVLHKDAESEAHVHTIGKFVKEQADLGRNVGLVVDLSNHSCLYEDDLSRDCPLVKYEHFFFVAKEIPSHAICQRVNQCITAYVLANPQDYVAIHCSYGWNRTGFVCATYLVEELHYGASQALAAFTSARSPGIRHEHFISEFLSRYSDSGGDAVGMTGERSVVG 282 P AA G + + P VL K+ KW +Y G+P+ + IPMKTP+ ++ + AE+ H T+ + +Q GR+VGLV+DL+NH CLY DD+ ++YEH +AK +PS V + ++ +P+ ++AIHC+YG+NRTGFV +YL + QAL +F +AR PG++H+ FI E +RY + SV+G Sbjct: 38 PAAAAGAEEEDTTP------SVLNKLQKWANYEATGRPVWPTHFIPMKTPMSREILDN------------WSLAEAPKHALTVPLLLAQQEAAGRDVGLVIDLANHDCLYSDDM---LDSLEYEHVQLIAKVLPSREAINEVERIAKSFWREHPEKFIAIHCAYGFNRTGFVVCSYLCQACGLSVDQALESFAAARPPGVKHDKFIRELYARYGSAAPSLAATPETSSVLG 247
BLAST of NO19G01910 vs. NCBI_GenBank
Match: GAX78328.1 (hypothetical protein CEUSTIGMA_g5770.t1 [Chlamydomonas eustigma]) HSP 1 Score: 147.1 bits (370), Expect = 1.000e-31 Identity = 82/223 (36.77%), Postives = 118/223 (52.91%), Query Frame = 0 Query: 49 VQPQA-ARGQDSVNDNPPDYAVAKVLQKITKWKDYTNYGQPLGNSRVIPMKTPLPLDLQRHHFPTSPSSSAVLHKDAESEAHVHTIGKFVKEQADLGRNVGLVVDLSNHSCLYEDDLSRDCPLVKYEHFFFVAKEIPSHAICQRVNQCITAYVLANPQDYVAIHCSYGWNRTGFVCATYLVEELHYGASQALAAFTSARSPGIRHEHFISEFLSRYSDSGGDA 271 ++P+A A Q S ++ P VL K+ KW G+P+ + IP KTP + P P H T+ + ++EQ GR VGL++DLSNH CLY +D+ D V++ H VAKE+P+ V + A+ P Y+AIHC+YG+NRTGF +YL++EL ++ALAAF +AR PGI+H F+ E RY + G A Sbjct: 2 IEPEARASEQPSTSETIP-----TVLTKLGKWAKCPAMGEPVSPTLFIPCKTPFSSTIMETWSPDDP------------PLHPFTVPQLIEEQKLRGRTVGLILDLSNHECLYSNDVPPD---VRHVHIQLVAKELPAQDFVDEVCRVAKAFWAECPSLYIAIHCAYGYNRTGFTLCSYLIQELGMSVNEALAAFLTARPPGIKHGEFVEELRLRYEECGSSA 204 The following BLAST results are available for this feature:
BLAST of NO19G01910 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO19G01910 ID=NO19G01910|Name=NO19G01910|organism=Nannochloropsis oceanica|type=gene|length=1895bpback to top protein sequence of NO19G01910.1 >NO19G01910.1-protein ID=NO19G01910.1-protein|Name=NO19G01910.1|organism=Nannochloropsis oceanica|type=polypeptide|length=349bpback to top Synonyms
Publications
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