NO19G01870, NO19G01870 (gene) Nannochloropsis oceanica
|
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO19G01870 vs. NCBI_GenBank
Match: EWM23697.1 (rna binding domain protein [Nannochloropsis gaditana]) HSP 1 Score: 672.2 bits (1733), Expect = 1.500e-189 Identity = 367/600 (61.17%), Postives = 428/600 (71.33%), Query Frame = 0
Query: 8 VGERMWNYLAPSGDKKGPFPESILIRMLLRRLPGLDTSSYCWTPGMDDWRPVGQMTNFKAVLEAEGAAWYYVDKDGEQQGPSEAKHMAALLQGGEIDGLSLVWHQNLAGGWKPLSEVEELRQVVRLLMRPXXXXXXXXXXXXXXXXXXXXXXXXXXDGASVVDERQVFYGDEMPTRSLAAASAAAKRSRSALSVKQSYVADDGTKYRLNPLTNEWEEAGSGXXXXXXXXXXXXXXXXXXXXXXXXGSMVRQTSV---GAPPSGEGGXXXXXXXXXXXXXXXXXEGWDKASNKWVYVTGLPSDATVEELESHFKQVGILAVDPETQQPRVKIYRDPTGAPKGDASVAYVRPESVELAVEILNGGLLRPGWPMTITKAVFQQKSVGNDGVEGGGGGPVKRRKVNEAKIKVARAAVKQALSWAEADDTGLGGKALRIVVVKNMFHPTQCQAPGFVEELQEDLEGECSSLGPLEKMTVFERHPEGVVVIKFGTAFAAEQCVKLMNGRFFAGRKLQSSYWDGSTDYTKAVFRAERPHATT----GXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLAEFGDELDNQELPPEFQLEVAPE 601
V ER+WNYLAPSGDKKGPFPES LIRML+++LPGLDTSS+CWTPGM++WRP+GQMTNF +VLEAE AAWYY+DK+G+QQGP++ K++A LL GE+DGLSLVWHQ+LAGGW+PLSEV+ELRQ++RL M P D +DERQVF +EMP S+A S K VKQSYVADDGTKYRLN TNEWEE S XXXXXXXXXXXXXXXXX S ++ GG EGWD+ASNKWVY+TGLPSDAT EELE+HFKQVGILA+DPETQ+PR+K+YRDP+GAPKGDASVA+VRPESVELAVEILN G+LRPGWP+ ITKAVF QK+ + E PVK+R++NEAK KVARAA KQALSW+EADD+GLGGKALRIVVVKNMF P+ C++ F+E+L++DLE EC++LGPLEKMT+FERHPEGV+VIKFGTAFAAEQCVKLMNGRFFAGRKLQS YWDGSTDYTKA ++ + T G RLA+FG ELDNQ+LP EFQLEVA E
Sbjct: 8 VSERVWNYLAPSGDKKGPFPESTLIRMLVKKLPGLDTSSFCWTPGMEEWRPIGQMTNFSSVLEAESAAWYYLDKNGQQQGPTDVKNVADLLHDGEVDGLSLVWHQDLAGGWRPLSEVDELRQLLRLFM-PSELGEEQSDKVQNIEPGSGAKAGGGADLNITMDERQVFQAEEMPGMSMAVTSTNKKTDDG--GVKQSYVADDGTKYRLNIDTNEWEEVESDDXXXXXXXXXXXXXXXXXSQQNCAASSTEYGTLERRKRKKKNRGG-----------------EGWDRASNKWVYITGLPSDATAEELEAHFKQVGILAIDPETQRPRIKMYRDPSGAPKGDASVAFVRPESVELAVEILNEGMLRPGWPLNITKAVFHQKA--STAGEKSKTEPVKKRRLNEAKAKVARAAAKQALSWSEADDSGLGGKALRIVVVKNMFEPSDCESAEFIEDLRKDLEIECTALGPLEKMTIFERHPEGVIVIKFGTAFAAEQCVKLMNGRFFAGRKLQSFYWDGSTDYTKANYKDRQTTTRTSWDHGKVTFISSEGNDRAYEGREPTEFTLAEDGEDTEEEKRLADFGAELDNQDLPEEFQLEVASE 585
BLAST of NO19G01870 vs. NCBI_GenBank
Match: CBJ28191.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 289.7 bits (740), Expect = 2.100e-74 Identity = 227/573 (39.62%), Postives = 299/573 (52.18%), Query Frame = 0
Query: 12 MWNYL-APSGDKKGPFPESILIRMLLRRLPGLDTSSYCWTPGMDDWRPVGQMTNFKAVLEAEGAAWYYVDKDGEQQGPSEAKHMAALLQGGEIDGLSLVWHQNLAGGWKPLSEVEELRQVVRLLMRPXXXXXXXXXXXXXXXXXXXXXXXXXXDGASVVDERQVFYGDEMPTRSLAAASAAAKRSRSALSVKQSYVADDGTKYRLNPLTNEWEEAGSGXXXXXXXXXXXXXXXXXXXXXXXXGSMVRQTSVGAPPSGEGGXXXXXXXXXXXXXXXXXEG-------------------------------------------------------WD-KASNKWVYVTGLPSDATVEELESHFKQVGILAVDPETQQPRVKIYRDPTGAPKGDASVAYVRPESVELAVEILNGGLLRPGWPMTITKAVFQQKSVGNDGVEGGGGGPVKRRKVNEAKIKVARAAVKQALSWAEADDTGLGGKALRIVVVKNMFHPTQCQA-PGFVEELQEDLEGECSSLGPLEKMTVFERHPEGVVVIKFGTAFAAEQCVKLMNGRFFAGRKLQSSYWDGSTDYT 527
MW YL + + GP ES+++++L R+ W+ GM +W+P+ Q+ F+ E W Y+ ++ EQ+GP A ++ LL+ GE+DG+++ W + G WKPL EV ELR +++ XXX ++ADDGTK+ + +W+E XXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXX W+ KA+N WVYV GLP D VEE+ HF + GI+A DP TQQP++KIY+D G PKGD SV Y + ESVE+A+ +L+ G LRPG + ++KAVFQQK D KR KVN+A++KVARAA +QALSWAE DDTG L+IVVV+NMFHP+ +A F EEL+ DL E LGP+EK+TVF ++ +G VV+KFGTA+AA +CVK+ +GRFF GRKL +WDG T+YT
Sbjct: 66 MWMYLDGANPTQHGPLTESLMLKLL--RIGTAHKDMMAWSQGMSEWQPLAQIEAFRETSELAATPWLYLGENSEQRGPVSAAALSRLLRQGEVDGMTMAWTTGM-GDWKPLGEVSELRPLLQ---------------------------DXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFMADDGTKFAWDEEKGDWKEVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLQWNKKATNLWVYVKGLPVDIEVEEVREHFSKCGIIATDPLTQQPKIKIYKDDEGHPKGDGSVCYAKAESVEMAINVLHEGQLRPGVTIEVSKAVFQQKGQSFDN--------TKRLKVNDARVKVARAAAEQALSWAENDDTGATKGGLKIVVVENMFHPSDFEANERFGEELEADLLAEGEKLGPVEKITVFAKNNKGPVVVKFGTAYAASECVKVFDGRFFGGRKLSCHFWDGVTNYT 600
BLAST of NO19G01870 vs. NCBI_GenBank
Match: ETK90297.1 (hypothetical protein L915_05920 [Phytophthora parasitica] >ETL43709.1 hypothetical protein L916_05855 [Phytophthora parasitica] >ETL96875.1 hypothetical protein L917_05745 [Phytophthora parasitica] >ETM50034.1 hypothetical protein L914_05863 [Phytophthora parasitica] >ETP20182.1 hypothetical protein F441_06054 [Phytophthora parasitica CJ01A1] >ETP48124.1 hypothetical protein F442_06075 [Phytophthora parasitica P10297]) HSP 1 Score: 253.4 bits (646), Expect = 1.700e-63 Identity = 193/533 (36.21%), Postives = 284/533 (53.28%), Query Frame = 0
Query: 12 MWNYL-APSGDKKGPFPESILIRMLLRRLPGLDTSSYCWTPGMDDWRPVGQMTNFKAVLEAEGAAWYYV-------DKDGEQQGPSEAKHMAALLQGGEIDGLSLVWHQNLAGGWKPLSEVEELRQVVRLLMRPXXXXXXXXXXXXXXXXXXXXXXXXXXDGASVVDERQVFYGDEMPTRSLAAASAAAKRSRSALSVKQSYVADDGTKYRLNPLTNEWEEAGSGXXXXXXXXXXXXXXXXXXXXXXXXGSMVRQ-TSVGAPPSGE-------GGXXXXXXXXXXXXXXXXXEGWDKASNKWVYVTGLPSDATVEELESHFKQVGILAVDPETQQPRVKIYRD-PTGAPKGDASVAYVRPESVELAVEILNGGLLRPGWPMTITKAVFQQKSVGNDGVEGGGGGPVKRRKVN-EAKIKVARAAVKQALSWAEADDTGLGGKALRIVVVKNMFHPTQCQAPGFVEELQEDLEGECSSLGPLEKMTVFERHPEGVVVIKFGTAFAAEQCVKLMNGRFFAGRKLQSSYWDGSTDYT 527
+W YL A +G +KGP I+ ++L + + + WT + +W + + F++ L A WYY+ K+ + GP+ + + L GE+DG++LVW Q L GWKP+ EV L++ ++ ++V E+QVF ++ T +L A + YV D +K + P EE S XXXXXXXXXX S Q S+G +G+ XXXXXXXXXXXXXXXXX N WVYV GLP D TV+E+ HF + G++ D T +PR+K+Y++ +G GD SV Y++ SVELAV++L+ +RP WP+ ++ AVFQQK G VKR+K+ +++ ++ ++ALSW E + G LRIVV+K+MF P + + + ELQED+ GECS +G + K+T+F +H +GVVVIKF ++ +A +CV++MNGRFFAGRKL+ +WDG TDYT
Sbjct: 5 LWLYLDAVTGQQKGPVSAPIIKKLLRKGV--IQPQQLVWTQRLSEWTAIASVEPFESYLRVWTAVWYYMAEDPTNPSKESVRTGPNTTQQLVQLFVDGEVDGMTLVWSQQL-DGWKPIGEVPSLKEFLQ-----------------EANEDLDREAELKEQASNVPIEQQVF--EKESTDALVAEDG------------KRYVFDAESKTYVTPEDKIEEELASLQEAMREANAEKQGGXXXXXXXXXXRSTDNQKVSIGEEAAGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNTWVYVNGLPLDVTVQEVHDHFAKCGVIQPDIATGKPRIKLYQNKESGGLNGDGSVCYMKEASVELAVQLLDKSQIRPDWPIDVSPAVFQQKE----------GDFVKRKKLKIDSRARIKMFEKEKALSWNEGEVNEPAG--LRIVVIKHMFTPAEIEDEAYETELQEDIHGECSKIGEVTKITLFAKHVDGVVVIKFASSGSAARCVEIMNGRFFAGRKLECGFWDG-TDYT 490
BLAST of NO19G01870 vs. NCBI_GenBank
Match: XP_008891458.1 (hypothetical protein PPTG_02190 [Phytophthora parasitica INRA-310] >ETN22172.1 hypothetical protein PPTG_02190 [Phytophthora parasitica INRA-310] >KUF81740.1 HIV Tat-specific factor 1 [Phytophthora nicotianae]) HSP 1 Score: 250.8 bits (639), Expect = 1.100e-62 Identity = 192/533 (36.02%), Postives = 283/533 (53.10%), Query Frame = 0
Query: 12 MWNYL-APSGDKKGPFPESILIRMLLRRLPGLDTSSYCWTPGMDDWRPVGQMTNFKAVLEAEGAAWYYV-------DKDGEQQGPSEAKHMAALLQGGEIDGLSLVWHQNLAGGWKPLSEVEELRQVVRLLMRPXXXXXXXXXXXXXXXXXXXXXXXXXXDGASVVDERQVFYGDEMPTRSLAAASAAAKRSRSALSVKQSYVADDGTKYRLNPLTNEWEEAGSGXXXXXXXXXXXXXXXXXXXXXXXXGSMVRQ-TSVGAPPSGE-------GGXXXXXXXXXXXXXXXXXEGWDKASNKWVYVTGLPSDATVEELESHFKQVGILAVDPETQQPRVKIYRD-PTGAPKGDASVAYVRPESVELAVEILNGGLLRPGWPMTITKAVFQQKSVGNDGVEGGGGGPVKRRKVN-EAKIKVARAAVKQALSWAEADDTGLGGKALRIVVVKNMFHPTQCQAPGFVEELQEDLEGECSSLGPLEKMTVFERHPEGVVVIKFGTAFAAEQCVKLMNGRFFAGRKLQSSYWDGSTDYT 527
+W YL A +G +KGP I+ ++L + + + WT + +W + + F++ L A WYY+ K+ + GP+ + + L GE+DG++LVW Q L GWKP+ EV L++ ++ ++V E+QVF ++ T +L A + YV D +K + P EE S XXXXXXXXXX S Q S+G +G+ XXXXXXXXXXXXXXXXX N WVYV GLP D TV+E+ HF + G++ D T +PR+K+Y++ + GD SV Y++ SVELAV++L+ +RP WP+ ++ AVFQQK G VKR+K+ +++ ++ ++ALSW E + G LRIVV+K+MF P + + + ELQED+ GECS +G + K+T+F +H +GVVVIKF ++ +A +CV++MNGRFFAGRKL+ +WDG TDYT
Sbjct: 5 LWLYLDAVTGQQKGPVSAPIIKKLLRKGV--IQPQQLVWTQRLSEWTAIASVEPFESYLRVWTAVWYYMAEDPTNPSKESVRTGPNTTQQLVQLFVDGEVDGMTLVWSQQL-DGWKPIGEVPSLKEFLQ-----------------EANEDLDREAELKEQASNVPIEQQVF--EKESTDALVAEDG------------KRYVFDAESKTYVTPEDKIEEELASLQEAMREANAEKQGGXXXXXXXXXXRSTDNQKVSIGEEAAGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNTWVYVNGLPLDVTVQEVHDHFAKCGVIQPDIATGKPRIKLYQNKESDGLNGDGSVCYMKEASVELAVQLLDKSQIRPDWPIDVSPAVFQQKE----------GDFVKRKKLKIDSRARIKMFEKEKALSWNEGEVNEPAG--LRIVVIKHMFTPAEIEDEAYETELQEDIHGECSKIGEVTKITLFAKHVDGVVVIKFASSGSAARCVEIMNGRFFAGRKLECGFWDG-TDYT 490
BLAST of NO19G01870 vs. NCBI_GenBank
Match: ETI50419.1 (hypothetical protein F443_06040 [Phytophthora parasitica P1569] >ETO79154.1 hypothetical protein F444_06095 [Phytophthora parasitica P1976]) HSP 1 Score: 250.0 bits (637), Expect = 1.900e-62 Identity = 197/525 (37.52%), Postives = 285/525 (54.29%), Query Frame = 0
Query: 12 MWNYL-APSGDKKGPFPESILIRMLLRRLPGLDTSSYCWTPGMDDWRPVGQMTNFKAVLEAEGAAWYYV-------DKDGEQQGPSEAKHMAALLQGGEIDGLSLVWHQNLAGGWKPLSEVEELRQVVRLLMRPXXXXXXXXXXXXXXXXXXXXXXXXXXDGASVVDERQVFYGDEMPTRSLAAASAAAKRSRSALSVKQSYVADDGTKYRLNPLTNEWEEAGSGXXXXXXXXXXXXXXXXXXXXXXXXGSMVRQTSVGAPPSGEGGXXXXXXXXXXXXXXXXXEGWDKASNKWVYVTGLPSDATVEELESHFKQVGILAVDPETQQPRVKIYRD-PTGAPKGDASVAYVRPESVELAVEILNGGLLRPGWPMTITKAVFQQKSVGNDGVEGGGGGPVKRRKVN-EAKIKVARAAVKQALSWAEADDTGLGGKALRIVVVKNMFHPTQCQAPGFVEELQEDLEGECSSLGPLEKMTVFERHPEGVVVIKFGTAFAAEQCVKLMNGRFFAGRKLQSSYWDGSTDYT 527
+W YL A +G +KGP I+ ++L + + + WT + +W + + F++ L A WYY+ K+ + GP+ + + L GE+DG++LVW Q L GWKP+ EV L++ ++ ++V E+QVF ++ T +L A KR K +D + L L EA + XXXXXXXXXXXXXXXXXX G XXXXXXXXXXXXXXXXX N WVYV GLP D TV+E+ HF + G++ D T +PR+K+Y++ +G GD SV Y++ SVELAV++L+ +RP WP+ ++ AVFQQK G VKR+K+ +++ ++ ++ALSW E + G LRIVV+K+MF P + + + ELQED+ GECS +G + K+T+F +H +GVVVIKF ++ +A +CV++MNGRFFAGRKL+ +WDG TDYT
Sbjct: 5 LWLYLDAVTGQQKGPVSAPIIKKLLRKGV--IQPQQLVWTQRLSEWTAIASVEPFESYLRVWTAVWYYMAEDPTNPSKESVRTGPNTTQQLVQLFVDGEVDGMTLVWSQQL-DGWKPIGEVPSLKEFLQ-----------------EANEDLDREAELKEQASNVPIEQQVF--EKESTDALVAED--GKRYVFDAESKTYVTPEDKIEEELASLQEAMREANAEKXXXXXXXXXXXXXXXXXXQKVSIGE--EAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNTWVYVNGLPLDVTVQEVHDHFAKCGVIQPDIATGKPRIKLYQNKESGGLNGDGSVCYMKEASVELAVQLLDKSQIRPDWPIDVSPAVFQQKE----------GDFVKRKKLKIDSRARIKMFEKEKALSWNEGEVNEPAG--LRIVVIKHMFTPAEIEDEAYETELQEDIHGECSKIGEVTKITLFAKHVDGVVVIKFASSGSAARCVEIMNGRFFAGRKLECGFWDG-TDYT 490
BLAST of NO19G01870 vs. NCBI_GenBank
Match: GAX99000.1 (Hypothetical protein PINS_006839 [Pythium insidiosum]) HSP 1 Score: 240.0 bits (611), Expect = 1.900e-59 Identity = 198/531 (37.29%), Postives = 283/531 (53.30%), Query Frame = 0
Query: 6 KLVGERMWNYLAP-SGDKKGPFPESILIRMLLRRLPGLDTSSYCWTPGMDDWRPVGQMTNFKAVLEAEGAAWYY-VDKDGEQQGPSEAKHMAALLQGGEIDGLSLVWHQNLAGGWKPLSEVEELRQVVRLLMRPXXXXXXXXXXXXXXXXXXXXXXXXXXDGASVVDERQVFYGDEMPTRSLAAASAAAKRSRSALSVKQSYVADDGTKYRLNPLTNE------WEEAGSGXXXXXXXXXXXXXXXXXXXXXXXXGSMVRQTSVGAPPSGEGGXXXXXXXXXXXXXXXXXEGWDKASNKWVYVTGLPSDATVEELESHFKQVGILAVDPETQQPRVKIYRDPT-GAPKGDASVAYVRPESVELAVEILNGGLLRPGWPMTITKAVFQQKSVGNDGVEGGGGGPVKRRKVN-EAKIKVARAAVKQALSWAEADDTGLGGKALRIVVVKNMFHPTQCQAPGFVEELQEDLEGECSSLGPLEKMTVFERHPEGVVVIKFGTAFAAEQCVKLMNGRFFAGRKLQSSYWDGSTDYT 527
K E +W Y+ P SG ++GP P +L R++ R + WT +++W P G F++ WYY +D + QQGP K + AL GEIDGL+LVW +++ W P+ E+ L++ V A+ ERQ ++ R A + L K+ ++ L L +E +E+ XXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXX SN WVYV GLP D T+EE+ HF + G++ D T PR+K+YR+ G KGDASV +++ SVELAV++L+ +RP W + ++ AVF+QK G VK +K +++ +V R ++ALSW E DD G LRIVV+K++F P + + + EL++++E ECS +G + K+T+F +H +GVVV+KF +A +A +C+++MNGRFFAGRKL+S +WDG TDYT
Sbjct: 10 KTAAEELWMYVDPASGQQRGPLPVRLLKRLI--RKGHVTPQHLVWTQRLNEWTPAGTTEPFESYCRVWFTFWYYMLDGNPTQQGPVNTKDLMALFLDGEIDGLTLVWTKDME-QWTPMGELPSLKEFVH--------------------------------EANEDHERQEEVLEQQ--RQAAQEDQVFDDAYVLLDTKKWITPEEKIAEDLEALRDEKLAARQSDESPELAELQKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKSNTWVYVNGLPLDVTLEEVRDHFAKCGVIQTDLVTGAPRIKLYRNKNLGGLKGDASVCFMKEASVELAVQLLDKSQIRPEWTIDVSPAVFEQK----------GAEYVKHKKPRLDSRARVKRLEQEKALSWNEGDDGDRAG--LRIVVIKHLFTPEEIEDDAYELELKQEIEEECSKMGEITKITLFSKHVDGVVVVKFASAGSAAKCMEVMNGRFFAGRKLESHFWDG-TDYT 490
BLAST of NO19G01870 vs. NCBI_GenBank
Match: OQR83166.1 (hypothetical protein ACHHYP_15015 [Achlya hypogyna]) HSP 1 Score: 235.7 bits (600), Expect = 3.700e-58 Identity = 170/525 (32.38%), Postives = 265/525 (50.48%), Query Frame = 0
Query: 11 RMWNYLAPSGDKKGPFPESILIRMLLRRLPGLDTSSYCWTPGMDDWRPVGQMT------NFKAVLEAEGAAWYYVDKDGEQQGPSEAKHMAALLQGGEIDGLSLVWHQ-NLAGGWKPLSEVEELRQVVRLLMRPXXXXXXXXXXXXXXXXXXXXXXXXXXDGASVVDERQVFYGDEMPTRSLAAASAAAKRSRSALSVKQSYVADDGTKYRLNPLTNEWEEAGSGXXXXXXXXXXXXXXXXXXXXXXXXGSMVRQTSVGAPPSGEGGXXXXXXXXXXXXXXXXXEGWDKASNKWVYVTGLPSDATVEELESHFKQVGILAVDPETQQPRVKIYRD-PTGAPKGDASVAYVRPESVELAVEILNGGLLRPGWPMTITKAVFQQKSVGNDGVEGGGGGPVKRRKVN-EAKIKVARAAVKQALSWAEADDTGLGGKALRIVVVKNMFHPTQCQAPGFVEELQEDLEGECSSLGPLEKMTVFERHPEGVVVIKFGTAFAAEQCVKLMNGRFFAGRKLQSSYWDGSTDYT 527
+ W Y+ SG +KGP E++L R+L R + + ++ W+P + + P Q+ VL A WYY D +QQGP ++ G++DGL+LVW L W PL +VE L++V++ + A + E+Q+ PT + +A ++ S++A++G+++ + +W XXXXXXXXXXXXXXXXX W+YV GLP DATV+E+ HF + G++ D ET +P++K+YR+ TGA GDA+V +++ SVELA+++L+ LRP WP+ + A F QK G V R+K+ ++K KV + ++QALSW AD+ + LRIVV+K+MF P + P +EL++D++ EC ++G + ++ FERHP GVV +++ A AAE+C+ +M+GRFF GRK+ +YWDG T+YT
Sbjct: 4 KKWMYIDSSGSQKGPLDEAVLKRLLRRGM--VTGDNFVWSPELAERMPSWQLAKETPIFRTTCVLWQALAQWYYYDHLKQQQGPVTTNDLSTKFLDGDVDGLTLVWSSCQLVEAWTPLGQVEVLKEVLQEI-----------------------NDEVERKEALLATEKQL-----DPTTQVMDVAAEPRK---------SFMAENGSEFIYDAEMRKW--LTPEEKIEEELAMLRDEVADVQGTHETFDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSKQKTWIYVNGLPLDATVQEVHDHFAKCGVIQKDLETDEPKIKLYRNKETGALNGDAAVCFMKEPSVELAIQLLDKVDLRPKWPLDVKVAEFAQK----------GDAFVPRKKIKLDSKAKVKKYQMEQALSWGAADE----DEGLRIVVLKHMFQPEEFDDPEAGQELKDDIKAECETIGDVSRILFFERHPLGVVQVRYQQAEAAEKCISIMHGRFFGGRKIDCAYWDG-TNYT 472
BLAST of NO19G01870 vs. NCBI_GenBank
Match: XP_024572868.1 (rna-binding protein [Plasmopara halstedii] >CEG36499.1 rna-binding protein [Plasmopara halstedii]) HSP 1 Score: 231.5 bits (589), Expect = 6.900e-57 Identity = 172/525 (32.76%), Postives = 259/525 (49.33%), Query Frame = 0
Query: 12 MWNYL-APSGDKKGPFPESILIRMLLRRLPGLDTSSYCWTPGMDDWRPVGQMTNFKAVLEAEGAAWYYV-------DKDGEQQGPSEAKHMAALLQGGEIDGLSLVWHQNLAGGWKPLSEVEELRQVVRLLMRPXXXXXXXXXXXXXXXXXXXXXXXXXXDGASVVDERQVFYGDEMPTRSLAAASAAAKRSRSALSVKQSYVADDGTKYRLNPLTNEWEEAGSGXXXXXXXXXXXXXXXXXXXXXXXXGSMVRQTSVGAPPSGEGGXXXXXXXXXXXXXXXXXEGWDKASNKWVYVTGLPSDATVEELESHFKQVGILAVDPETQQPRVKIYRD-PTGAPKGDASVAYVRPESVELAVEILNGGLLRPGWPMTITKAVFQQKSVGNDGVEGGGGGPVKRRKVN-EAKIKVARAAVKQALSWAEADDTGLGGKALRIVVVKNMFHPTQCQAPGFVEELQEDLEGECSSLGPLEKMTVFERHPEGVVVIKFGTAFAAEQCVKLMNGRFFAGRKLQSSYWDGSTDYT 527
+W YL A +G++KGP P I+ ++L + L + WT + +W+ + + F A A WYY+ K+ + GP + + L G++DG++LVW Q + WKP+ +V L++ ++ A V E QVF + A A A R YV D +K + P +E S + T++G S + XXXXXXXXXXXX WVYV GLP D T++E+ HF + G++ D + +PR+K+Y + +G GD S+ Y++ SVELAV++L+ +RP WP+ ++ AVFQQK G VKR+KV + + K+ ++ALSW E + G RIVV+K+MF P++ + + +EL++D+ ECS LG + K+T+F + +GVVVIKF ++ +A QCV LMNGRFFAGRKL+ S+WDG TDYT
Sbjct: 5 LWLYLDAVTGEQKGPVPSPIIKKLLRKGL--IQPQQLVWTQRLSEWKAIVSVEPFAAYNRAWRTMWYYMAENLTDTSKEVMRAGPVLTQQLVELFTNGDVDGMTLVWSQEV-DDWKPIGDVPLLKEFLQ-----------------EANDEIDRQSELKEQIADVPIEDQVFENES------ADAFIAEDGKR--------YVFDAESKMYVTPEIKIEDELAS-----------LREAVADTIAETQTDTTNAATTIG--ESTDHAEMNASXXXXXXXXXXXXXXXXXXXXXWVYVNGLPLDVTLQEVHDHFAKCGVIQTDIVSGEPRIKLYENKESGGLNGDGSICYMKEASVELAVQLLDKSQIRPEWPIDVSPAVFQQKE----------GEFVKRKKVKIDTRAKIRMFEKEKALSWNEGEINEPTG--FRIVVIKHMFTPSEIEDESYEKELRDDIYDECSKLGEVSKITLFAKREDGVVVIKFTSSGSAAQCVDLMNGRFFAGRKLECSFWDG-TDYT 469
BLAST of NO19G01870 vs. NCBI_GenBank
Match: OQS06164.1 (hypothetical protein THRCLA_01776 [Thraustotheca clavata]) HSP 1 Score: 231.1 bits (588), Expect = 9.000e-57 Identity = 163/524 (31.11%), Postives = 262/524 (50.00%), Query Frame = 0
Query: 11 RMWNYLAPSGDKKGPFPESILIRMLLRRLPGLDTSSYCWTPGMDDWRPVGQMT------NFKAVLEAEGAAWYYVDKDGEQQGPSEAKHMAALLQGGEIDGLSLVWHQ-NLAGGWKPLSEVEELRQVVRLLMRPXXXXXXXXXXXXXXXXXXXXXXXXXXDGASVVDERQVFYGDEMPTRSLAAASAAAKRSRSALSVKQSYVADDGTKYRLNPLTNEWEEAGSGXXXXXXXXXXXXXXXXXXXXXXXXGSMVRQTSVGAPPSGEGGXXXXXXXXXXXXXXXXXEGWDKASNKWVYVTGLPSDATVEELESHFKQVGILAVDPETQQPRVKIYRD-PTGAPKGDASVAYVRPESVELAVEILNGGLLRPGWPMTITKAVFQQKSVGNDGVEGGGGGPVKRRKVNEAKIKVARAAVKQALSWAEADDTGLGGKALRIVVVKNMFHPTQCQAPGFVEELQEDLEGECSSLGPLEKMTVFERHPEGVVVIKFGTAFAAEQCVKLMNGRFFAGRKLQSSYWDGSTDYT 527
+ W Y+ G++KGP E +L R+L R + + +Y W+P + + P QM VL WYY D+D Q+GP + L GE+DGL+LVW L W P+ +V L++V++ + +D + + ++ +S ++SY+A++G ++ + T +W + T P XXXXXXXXXXXXXXXXX W+Y+ GLP D T++E+ +HF + G++ D ET P++K+YR+ TG GD ++ +++ SVELA+++L+ +RP WP+ + A F QK G++ V P K+ K+ ++K KV + ++QALSW AD+ + LRIVV+K+MF P P +EL++D++ EC +LG + K+T FE+H GVV IK+ + +A +C++LM+GRFF G+K++ YWDG T+Y+
Sbjct: 9 KKWLYVDTQGNQKGPLDEQVLKRLLRRGI--VQGENYVWSPELAEEMPTWQMAKDTPIFQTACVLWQSTPQWYYYDQDKVQKGPLTTTELTNLFLDGEVDGLTLVWSNCKLVDEWTPMGQVNVLKEVLQEI------------------NDEMEKKEALMQTEKQIDPKNIVMDED-------------------ISARKSYLAENGKEFIYDSETRKWLTPEEKIEDDLAILRDEVNEMTSRNESFEDD---KPTLESEPAPRXXXXXXXXXXXXXXXXXXXXXXVASKQKTWIYINGLPLDVTIDEVHTHFSKCGVIQKDLETDTPKIKLYRNKDTGQLNGDGAICFMKEPSVELAIQLLDKVDIRPKWPLDVKVAEFTQK--GDEFV------PRKKAKL-DSKAKVKKFQMEQALSWGAADEE----EGLRIVVLKHMFTPNDFGDPVAGQELKDDIKAECETLGAITKITFFEQHVAGVVQIKYHSPESATKCIELMHGRFFGGKKIECEYWDG-TNYS 476
BLAST of NO19G01870 vs. NCBI_GenBank
Match: XP_008608057.1 (hypothetical protein SDRG_04173 [Saprolegnia diclina VS20] >EQC38465.1 hypothetical protein SDRG_04173 [Saprolegnia diclina VS20]) HSP 1 Score: 230.3 bits (586), Expect = 1.500e-56 Identity = 170/525 (32.38%), Postives = 264/525 (50.29%), Query Frame = 0
Query: 11 RMWNYLAPSGDKKGPFPESILIRMLLRRLPGLDTSSYCWTPGMDDWRPVGQMT------NFKAVLEAEGAAWYYVDKDGEQQGPSEAKHMAALLQGGEIDGLSLVWHQ-NLAGGWKPLSEVEELRQVVRLLMRPXXXXXXXXXXXXXXXXXXXXXXXXXXDGASVVDERQVFYGDEMPTRSLAAASAAAKRSRSALSVKQSYVADDGTKYRLNPLTNEWEEAGSGXXXXXXXXXXXXXXXXXXXXXXXXGSMVRQTSVGAPPSGEGGXXXXXXXXXXXXXXXXXEGWDKASNK-WVYVTGLPSDATVEELESHFKQVGILAVDPETQQPRVKIYRD-PTGAPKGDASVAYVRPESVELAVEILNGGLLRPGWPMTITKAVFQQKSVGNDGVEGGGGGPVKRRKVNEAKIKVARAAVKQALSWAEADDTGLGGKALRIVVVKNMFHPTQCQAPGFVEELQEDLEGECSSLGPLEKMTVFERHPEGVVVIKFGTAFAAEQCVKLMNGRFFAGRKLQSSYWDGSTDYT 527
+ W Y+ G +KGP E +L R+L R L + +Y W+P + + P Q+ VL WYY D+ +Q+GP ++ L G+IDGL+LVW L W P+ +V+ L++V++ + V+ ++ E + L +S S SA + S++ADDG ++ + +W XXXXXXXXXXXXXXXXX W + K W+Y+ GLP DAT++E+ HF + G++ D ET +P++K+YR+ +GA GDASV +++ SVELA+++L+ LRP WP+ + A F QK G P K+ K+ +++ KV + ++QALSW AD+ + LRIVV+K+MF P EL++D++ EC +LG + K+T F++HP GVV +K+ +A+ CV+ M+GRFF+GRK++ +YWDG T+YT
Sbjct: 14 KKWLYVDGQGAQKGPLDEQVLKRLLRRGL--VTGDNYVWSPELAELLPTWQLAKETLVFGTTCVLWQTLPQWYYYDQAKQQKGPVTTTDLSTLFLDGDIDGLTLVWSSAQLVSAWTPMGQVDVLKEVLQEI-------------------------------NDEVERKEALLATE---KKLDPSSLVMDSSASA---RTSFLADDGKEFIYDSEMRKWLTPEEKIEEELAMLRDEVDDVKASNDMFDD----XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWVASKQKTWIYINGLPLDATIQEVHDHFAKCGVIQRDLETDEPKIKLYRNKDSGALNGDASVCFMKEPSVELAIQLLDKVDLRPNWPLDVKVAEFAQK--------GDAFVPRKKAKL-DSRAKVKKFQMEQALSWGAADE----DEGLRIVVLKHMFTPADFDDVEAGNELKDDIKAECETLGDVTKITFFDKHPLGVVQVKYALPESAQSCVERMHGRFFSGRKIECAYWDG-TNYT 481 The following BLAST results are available for this feature:
BLAST of NO19G01870 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO19G01870 ID=NO19G01870|Name=NO19G01870|organism=Nannochloropsis oceanica|type=gene|length=2725bpback to top protein sequence of NO19G01870.1 >NO19G01870.1-protein ID=NO19G01870.1-protein|Name=NO19G01870.1|organism=Nannochloropsis oceanica|type=polypeptide|length=601bpback to top Synonyms
Publications
|