NO19G01820, NO19G01820 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of NO19G01820 vs. NCBI_GenBank
Match: XP_009845689.1 (hypothetical protein H257_18348 [Aphanomyces astaci] >ETV64832.1 hypothetical protein H257_18348 [Aphanomyces astaci]) HSP 1 Score: 104.0 bits (258), Expect = 6.800e-19 Identity = 66/174 (37.93%), Postives = 91/174 (52.30%), Query Frame = 0 Query: 68 RLAFTPNVDKFARLQFSDTYSNV---PMGGITDLYGPNVAVHVESMGVTSFQKLYRQEDPLGRTFPILTAIINLDRGVVTGITFDNGCVLCNNSDRCVENTYDFLG-ELY-SGVGATSDCFLTDAECAANTQADPRACQLTVYVTWTGTDAKGNFLTSSSRRFSLFSSYSVNSY 237 R F P VD++ +L+ ++Y++ P Y + + SM S K Y G+ +PILTA++++ +G V GI++D+GC LC +S C N Y LY S G S C+ EC T C L VYV WTGTDA GN+L+S+ R S F YSVNSY Sbjct: 53 RAVFAPVVDQYVQLRLYESYTDTRIRPTNSSAAAY-----MTISSMSSRSVYKQYTTAK--GKAYPILTAVVSVKQGEVQGISWDDGCYLC-DSTTCEANLYSTPAIPLYNSAFGDGSTCYKESPECLNTT----GLCDLAVYVGWTGTDANGNYLSSAGMRISQFQKYSVNSY 214
BLAST of NO19G01820 vs. NCBI_GenBank
Match: GBG31539.1 (Hypothetical Protein FCC1311_077632 [Aurantiochytrium sp. FCC1311]) HSP 1 Score: 103.6 bits (257), Expect = 8.900e-19 Identity = 82/233 (35.19%), Postives = 110/233 (47.21%), Query Frame = 0 Query: 17 LFLAVLLLLQTVV----RACLPLDGMNAGVTLNRGTHVCVVLSTPEWVDGTSNYSRLAFTPNVDKFARLQFSDTYSNVPMGGITDLYGPNVAVHVESMGV-TSFQKLYRQEDPLGRT--FPILTAIINLDRGVVTGITFDNGCVLCNNS-----DRCVENTYDF-LGELYSGVGAT---SDCFLTDAECAANTQADPRACQLTVYVTWTGTDAKGNFLTSSSRRFSLFSSYSV 234 +FLA +L++ + +AC+P + VTL T VC+V N + P D+++RL + TY L+ H+ESMGV +SF+K Y E G FPILTAIIN+D VT I++D+GC + S CV N Y F V A SD LT C + C L VYV WTG D+ GN+ SS RRFS+F Y + Sbjct: 1 MFLAAVLVVTALCTRSGQACMP-SNSDGSVTLGETTFVCLV---------RDNAAYALSKPRADRYSRLTYDQTYEENRDDCQEQLF------HIESMGVQSSFRKRYCTEADDGTLLFFPILTAIINVDENGVTDISWDDGCYFTDGSVSESVQTCVANAYGFNTSSPIDSVPAPSQGSDTALTREVCDSEPDG---FCDLAVYVAWTGKDSNGNYFGSSGRRFSVFRDYDL 214
BLAST of NO19G01820 vs. NCBI_GenBank
Match: CCA20136.1 (conserved unknown protein putative [Albugo laibachii Nc14]) HSP 1 Score: 102.4 bits (254), Expect = 2.000e-18 Identity = 62/185 (33.51%), Postives = 96/185 (51.89%), Query Frame = 0 Query: 64 SNYSRLAFTPNVDKFARLQFSDTYSNVPMGGITDLYGPNVAVHVESMGVTSFQKLYRQEDPLGRTFPILTAIINLDRGVVTGITFDNGCVLCNNSDRCVENTYDFLGELYSGVGATS--------DCFLTDAECAANTQADPRACQLTVYVTWTGTDAKGNFLTSSSRRFSLFSSYSVNSYVNGL 241 +N R FTP DKF+ + +++++ +GG + +V V S+G + K Y E+ FP LTAII++ +G+V G+T+D+GC C+ D C+ N LYS + TS C+ + C AC LT+Y+ WTGTD GN+L+S+ R S F +S SY + + Sbjct: 51 NNEFRAVFTPTADKFSVISIRESWNDSRIGGNPE----GASVSVSSLGNRTLYKRYAHENV---RFPYLTAIISVKQGLVQGVTWDDGCFFCSR-DACLPN-------LYSSITNTSLQLPHQGFSCYTNTSICNDTVS----ACDLTIYIGWTGTDKDGNYLSSAGLRMSQFQKFSFASYYSSI 216
BLAST of NO19G01820 vs. NCBI_GenBank
Match: OQS07012.1 (hypothetical protein THRCLA_20230 [Thraustotheca clavata]) HSP 1 Score: 102.1 bits (253), Expect = 2.600e-18 Identity = 76/231 (32.90%), Postives = 116/231 (50.22%), Query Frame = 0 Query: 16 ILFLAVLLLLQTVVRACLPLDGMNAGVTLNRG--THVCVVLSTPEWVDGTSNYSRLAFTPNVDKFARLQFSDTYSNVPMGGITDLYGPNVAVH--VESMGVTSFQKLYRQEDPLGRTFPILTAIINLDRGVVTGITFDNGCVLCNNSDRCVENTYDF--LGELYSGVGATSDCFLTDAECAANTQADPRACQLTVYVTWTGTDAKGNFLTSSSRRFSLFSSYSVNSYVNGL 241 I +LAVL + + + L D N L +G T+VC+ ++ R FTP VD F +L+ ++Y + + + + A + + SM S KLY D G+ FP TA+I + G++ GI++D+GC LC NS C N Y + + S G+ + CF C++ +C L ++V WTGTD GN+L+S+ R S F YSV SYV+ L Sbjct: 4 IAYLAVLAQVHGAIISGLCND-KNTSTPLVKGDQTYVCI---------NINDKYRAVFTPVVDDFVQLRVYNSYKD------SRIENSSFASYLTLSSMTSRSVYKLY--TDQTGKAFPSFTAVITVVDGLIQGISWDDGCYLC-NSTSCASNIYSAPKVPLVNSAFGSGNTCFHNQTACSST----ENSCDLGIFVGWTGTDYNGNYLSSAGMRVSQFQQYSVTSYVDDL 211
BLAST of NO19G01820 vs. NCBI_GenBank
Match: EJK69514.1 (hypothetical protein THAOC_09222 [Thalassiosira oceanica]) HSP 1 Score: 97.4 bits (241), Expect = 6.400e-17 Identity = 64/172 (37.21%), Postives = 84/172 (48.84%), Query Frame = 0 Query: 72 TPNVDKFARLQFSDTYSNVPMGGITDL-YGPNVAVHV--ESMGVTSFQKLYRQEDPLGRTFPILTAIINLDRGVVTGITFDNGCVLCNNSDRCVENTYDFLGEL--YSGVG-ATSDCFLTDAECAANTQADPRACQLTVYVTWTGTDAKGNFLTSSSRRFSLFSSYSVNSYV 238 TPNV L +Y G I + Y + A H+ S SFQ+ Y +P LTAII++D+G+V GI +DN C+ C C+ NTY+F G L +G + C + C D C+LT+YV WTGTDA GN L SS RFS+F V V Sbjct: 134 TPNVS--YALSLPPSYCPAAFGAIAEKNYFQSEATHIFAASQSKLSFQRKYYDTSD-SFLYPYLTAIIDVDQGIVQGIAWDNACIFCEEK-HCLPNTYNFNGTLATQEQIGQPVNGCRVEQLTCLEMKGGDNDVCELTLYVVWTGTDADGNVLLSSDSRFSMFPPNRVQEKV 301
BLAST of NO19G01820 vs. NCBI_GenBank
Match: OAO14849.1 (hypothetical protein AV274_3554 [Blastocystis sp. ATCC 50177/Nand II]) HSP 1 Score: 94.7 bits (234), Expect = 4.100e-16 Identity = 68/233 (29.18%), Postives = 104/233 (44.64%), Query Frame = 0 Query: 21 VLLLLQTVVRACLPLDGMNAGVTLNRGTHVCVVLSTPEWVDGTSNYSRLAFTPNVDKFARLQFSDTYSNVPMGGITDLYGPNVAVHVESMG-----VTSFQKLYRQEDPLGRTFPILTAIINLDRGVVTGITFDNGCVLC------NNSDRCVENTYDFLGELYSGVGA--TSDCFLTDAECAANTQADPRACQLTVYVTWTGTDAKGNFLTSSSRRFSLFSSYSVNSYVNGL 241 +LL++ V C+P GM + + HVC L+ E R F P VD++ R +S+ Y V + +Y ++ G S KLY F LTA+IN+++GVV I++D+GC+ C NS E + E + A ++CF +CA + C LT+++ W G+D KG SS+ R S F S S+ S +N L Sbjct: 6 LLLIVSVVFSQCVPSTGME-DILRGKEHHVCFTLNGSE---------RSLFHPKVDEYGRYTYSNLYERVRTNTTSPVYVQLSVSSYDASGEKIVTANSVPKLYTGLSHSNHFFTYLTAVINVEKGVVKSISWDDGCLTCFASGCGQNSVITTEGRLHLISESDTRYKAYRGNNCFQVSTDCAEG----KKNCDLTIFLVWEGSDKKGRVFHSSNLRLSRFQSGSLESAINAL 224
BLAST of NO19G01820 vs. NCBI_GenBank
Match: OAO16665.1 (hypothetical protein AV274_1606 [Blastocystis sp. ATCC 50177/Nand II]) HSP 1 Score: 94.4 bits (233), Expect = 5.400e-16 Identity = 68/233 (29.18%), Postives = 103/233 (44.21%), Query Frame = 0 Query: 21 VLLLLQTVVRACLPLDGMNAGVTLNRGTHVCVVLSTPEWVDGTSNYSRLAFTPNVDKFARLQFSDTYSNVPMGGITDLYGPNVAVHVESMG-----VTSFQKLYRQEDPLGRTFPILTAIINLDRGVVTGITFDNGCVLC------NNSDRCVENTYDFLGELYSGVGA--TSDCFLTDAECAANTQADPRACQLTVYVTWTGTDAKGNFLTSSSRRFSLFSSYSVNSYVNGL 241 +LL++ V C+P GM + + HVC L+ E R F P VD++ R +S+ Y V + +Y ++ G S KLY F LTA+IN+++GVV I++D+GC+ C NS E + E + A +CF +CA + C LT+++ W G+D KG SS+ R S F S S+ S +N L Sbjct: 240 LLLIVSVVFSQCVPSTGME-DILRGKEHHVCFTLNGSE---------RSLFHPKVDEYGRYTYSNLYERVRTNTTSPVYVQLSVSSYDASGEKIVTANSVPKLYTGLSHSNHFFTYLTAVINVEKGVVKSISWDDGCLTCFASGCGQNSVITTEGRLHLISESDTRYKAYRGDNCFQVSTDCAEG----KKNCDLTIFLVWEGSDKKGRVFHSSNLRLSRFQSGSLESAINAL 458
BLAST of NO19G01820 vs. NCBI_GenBank
Match: XP_024583478.1 (RxLR-like protein [Plasmopara halstedii] >CEG47109.1 RxLR-like protein [Plasmopara halstedii]) HSP 1 Score: 91.3 bits (225), Expect = 4.600e-15 Identity = 83/257 (32.30%), Postives = 120/257 (46.69%), Query Frame = 0 Query: 13 TSMILFLAVLLLLQTVVRA-CLPLDGMNAGVTLNRGTHVCVVLSTPEWVDGTSNYSRLAFTPNVDKFARLQFSDTYSNVPMGGITDLYGPNVA-VHVESMGVTSFQKLYRQEDPLGRTFPILTAIINLDRGVVTGITFDNGCVLCNNSDRCVENTYDFLGEL----YSGVGAT-----SDCFLTDAE------------------CAANTQADPRACQLTVYVTWTGTDAKGNFLTSSSRRFSLFSSYSVNSYVNGL 241 T+++L A + +QT V + C P D + V T+VCV ++ R FTP DKF L+ SD++++ +G P+ A V V S+ + KLY GR P +TAII++ GVV G+++D GC C +D C N + E SG G T +C T+A ANT A C +TVY+ WTGTD G +L S+S R S FS YS+ S+ + + Sbjct: 6 TAILLSAARVEAMQTNVSSICSPSD-PSPLVVKGSITYVCV---------NVNDKYRTLFTPIADKFIVLRISDSWNDTRIGA-----NPSGAFVTVSSLKYRTNYKLYSSTSK-GRLSPYMTAIISVKMGVVQGVSWDEGCYFC-TADMCDYNLFSKPEETAMTRLSGQGKTCYTFVDNCSATNASKLSIAVGDGSIAGSNATVSGANTSAQ---CDITVYLGWTGTDKYGEYLGSASLRMSQFSKYSIGSFFSSI 242
BLAST of NO19G01820 vs. NCBI_GenBank
Match: XP_002296517.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED87213.1 predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 90.5 bits (223), Expect = 7.800e-15 Identity = 75/250 (30.00%), Postives = 112/250 (44.80%), Query Frame = 0 Query: 13 TSMILFLAVLLLLQTVVR------------ACL-PLDGMNAGVTLNRGTHVCVVLSTPEWVDGTSNYSRLAFTPNVDKFARLQ----FSDTYSNVPMGGITDLYGPNVAVHVESMGVTSFQKLYRQEDPLGR-TFPILTAIINLDRGVVTGITFDNGCVLCNNSDRCVENTYDFLGELYSG---VGATSDCFLTDAECAANTQADPRACQLTVYVTWTGTDAKGNFLTSSSRRFSLFSSYSVNSYV-NGL 241 TS++L +A LLL T +C+ PL+ V T VC+ + + +Y R + D+F+ + F+D S+ P G + A H+ + T+ L R D + +P LTAII++ G++ GI +D+ CV C S RC+ NTY+F G + + T C+LT EC C L ++V WTGT G L SS RFS F + V NG+ Sbjct: 2 TSLLLTIATLLLNLTPTTHAQSTTTSNNPYSCIDPLNLYTTEVRKGENTTVCLYVGPDGDWNSDISYKRFSVNLVADEFSSYRIPGSFNDIVSSNPFG--------SDATHIFASSQTALSFLRRYYDTTTQHIYPYLTAIIDVRDGLIRGIAWDDACVFCQKS-RCLSNTYNFNGAVATKDQISQPTDGCYLTRNECVTLHAGGSDECDLKLFVVWTGTAVGGKVLLSSDSRFSAFPPNRIQENVKNGV 242
BLAST of NO19G01820 vs. NCBI_GenBank
Match: XP_009531595.1 (hypothetical protein PHYSODRAFT_352038 [Phytophthora sojae] >EGZ14166.1 hypothetical protein PHYSODRAFT_352038 [Phytophthora sojae]) HSP 1 Score: 88.6 bits (218), Expect = 3.000e-14 Identity = 66/220 (30.00%), Postives = 101/220 (45.91%), Query Frame = 0 Query: 48 THVCVVLSTPEWVDGTSNYSRLAFTPNVDKFARLQFSDTYSNVPMGGITDLYGPNVA-VHVESMGVTSFQKLYRQEDPLGRTFPILTAIINLDRGVVTGITFDNGCVLCNNSDRCVENTYDFLGELYSG--VGATSDCFLTDAECAA-NTQAD-----------------------PRACQLTVYVTWTGTDAKGNFLTSSSRRFSLFSSYSVNSYVNGL 241 T+VC+ ++ R FTP DKF L+ SD++++ +G P+ A + V S+ + KLY R P +TAII++ +GVV G+++D GC C ++ C N Y E +G G C+ C+ +T A C LT+YV WTGTD G++L S+S R S FS YS+ S+ + + Sbjct: 29 TYVCI---------NVNDEYRTLFTPVADKFTVLRISDSWNDTRIGA-----NPSGAFLTVSSLKYRTNYKLYSSAS-TNRISPYMTAIISVKKGVVQGVSWDEGCYFC-TAEMCDYNLYSKPEESATGRLSGQGQTCYSAVESCSGYSTNASDAXXXXXXXXXXXXXXXXXXXXXXXXCDLTIYVGWTGTDKNGDYLGSASLRMSQFSKYSIGSFFSNI 232 The following BLAST results are available for this feature:
BLAST of NO19G01820 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO19G01820 ID=NO19G01820|Name=NO19G01820|organism=Nannochloropsis oceanica|type=gene|length=735bpback to top protein sequence of NO19G01820.1 >NO19G01820.1-protein ID=NO19G01820.1-protein|Name=NO19G01820.1|organism=Nannochloropsis oceanica|type=polypeptide|length=245bpback to top Synonyms
Publications
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