NO19G01720, NO19G01720 (gene) Nannochloropsis oceanica

Overview
NameNO19G01720
Unique NameNO19G01720
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length4031
Alignment locationchr19:517632..521662 -

Link to JBrowse

Properties
Property NameValue
DescriptionCamp responsive element modulator
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr19genomechr19:517632..521662 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0003700DNA-binding transcription factor activity
GO:0003700DNA-binding transcription factor activity
GO:0003677DNA binding
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
GO:0005634nucleus
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
GO:0006355regulation of transcription, DNA-templated
GO:0009058biosynthetic process
GO:0006139nucleobase-containing compound metabolic process
Vocabulary: INTERPRO
TermDefinition
IPR004827bZIP
IPR001630Leuzip_CREB
Homology
BLAST of NO19G01720 vs. NCBI_GenBank
Match: XP_012201241.1 (hypothetical protein SPRG_20257 [Saprolegnia parasitica CBS 223.65] >KDO28097.1 hypothetical protein SPRG_20257 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 191.8 bits (486), Expect = 5.000e-45
Identity = 108/271 (39.85%), Postives = 166/271 (61.25%), Query Frame = 0
Query:  139 KKLRRLEKNRESARECRRRKKEHVVELQKQVALLEAENLKLKLQLKVGEESQAQERQEKGRITKKLDDMVKTGASESDIWQTIDMLKERYSDYGSDRRSAIEFHTNQLEKLLLPTKLTKLCMWMLFNMGDENGQTLSPVSAPTLLPSPSAHGKPENTSPPSSATATDAGAQAAARHLWSILSEELQVTPDQQASLLEHRGSVVAMDADLDVTAGMLRDLRALIDDKNSSLDQELQEVQKILTPTQTAKFILWITRNPACMHMLNQLWRAVY 410
            ++ +RLE+NRESARECRRRK++H++ ++++   LE EN++L+ QLK G+E+  QE  EK +I  +L+ M+   A E +I   ID  KE+YSDYG  R+SA+ +H +QLE+LL+PT++TK+C+W L                           K ++         T          L SIL+ +L +T +Q+ S+  HR +VV +  +L +   +L  L+A ++ KN +LD E+ ++Q ILTPTQ AKFI+W+T NPACMH+LN+LW  V+
Sbjct:  149 QRKKRLERNRESARECRRRKRDHILGVEERCKALEKENMELRSQLKAGKEAMKQEEDEKTQICVELESMIHENAPEQEIAAKIDNFKEQYSDYGQGRQSALNYHLHQLERLLMPTQVTKMCIWAL---------------------------KQDDAFWEDGEDETS---------LLSILTHDLGLTEEQRKSIQSHRSAVVKICENLRLALQLLHQLKADVEQKNITLDTEMDQLQNILTPTQRAKFIVWVTNNPACMHLLNKLWTNVF 383          
BLAST of NO19G01720 vs. NCBI_GenBank
Match: OQR82571.1 (hypothetical protein ACHHYP_15858 [Achlya hypogyna])

HSP 1 Score: 191.8 bits (486), Expect = 5.000e-45
Identity = 108/271 (39.85%), Postives = 166/271 (61.25%), Query Frame = 0
Query:  139 KKLRRLEKNRESARECRRRKKEHVVELQKQVALLEAENLKLKLQLKVGEESQAQERQEKGRITKKLDDMVKTGASESDIWQTIDMLKERYSDYGSDRRSAIEFHTNQLEKLLLPTKLTKLCMWMLFNMGDENGQTLSPVSAPTLLPSPSAHGKPENTSPPSSATATDAGAQAAARHLWSILSEELQVTPDQQASLLEHRGSVVAMDADLDVTAGMLRDLRALIDDKNSSLDQELQEVQKILTPTQTAKFILWITRNPACMHMLNQLWRAVY 410
            ++ +RLE+NRESARECRRRK++H++ ++++   LE EN++L+ QLK G+E+  QE  EK +I  +L+ M+   A E +I   ID  KE+YSDYG  R+SA+ +H +QLE+LL+PT++TK+C+W L                           K ++         T          L SIL+ +L +T +Q+ S+  HR +VV +  +L +   +L  L+A ++ KN +LD E+ ++Q ILTPTQ AKFI+W+T NPACMH+LN+LW  V+
Sbjct:  176 QRKKRLERNRESARECRRRKRDHILGVEERCKALEKENMELRSQLKAGKEAMKQEEDEKNQICIELETMIHENAPEQEIAAKIDNFKEQYSDYGQGRQSALNYHLHQLERLLMPTQVTKMCIWAL---------------------------KQDDAFWEDGEDETS---------LLSILTHDLGLTDEQRKSIQSHRSAVVKICENLRLALQLLHQLKADVEQKNITLDTEMDQLQNILTPTQRAKFIVWVTNNPACMHLLNKLWTNVF 410          
BLAST of NO19G01720 vs. NCBI_GenBank
Match: XP_008612955.1 (hypothetical protein SDRG_08835 [Saprolegnia diclina VS20] >EQC33732.1 hypothetical protein SDRG_08835 [Saprolegnia diclina VS20])

HSP 1 Score: 191.0 bits (484), Expect = 8.600e-45
Identity = 108/271 (39.85%), Postives = 166/271 (61.25%), Query Frame = 0
Query:  139 KKLRRLEKNRESARECRRRKKEHVVELQKQVALLEAENLKLKLQLKVGEESQAQERQEKGRITKKLDDMVKTGASESDIWQTIDMLKERYSDYGSDRRSAIEFHTNQLEKLLLPTKLTKLCMWMLFNMGDENGQTLSPVSAPTLLPSPSAHGKPENTSPPSSATATDAGAQAAARHLWSILSEELQVTPDQQASLLEHRGSVVAMDADLDVTAGMLRDLRALIDDKNSSLDQELQEVQKILTPTQTAKFILWITRNPACMHMLNQLWRAVY 410
            ++ +RLE+NRESARECRRRK++H++ ++++   LE EN++L+ QLK G+E+  QE  EK +I  +L+ M+   A E +I   ID  KE+YSDYG  R+SA+ +H +QLE+LL+PT++TK+C+W L                           K ++         T          L SIL+ +L +T +Q+ S+  HR +VV +  +L +   +L  L+A ++ KN +LD E+ ++Q ILTPTQ AKFI+W+T NPACMH+LN+LW  V+
Sbjct:  183 QRKKRLERNRESARECRRRKRDHILGVEERCKALEKENMELRSQLKAGKEAMKQEEDEKTQICIELESMIHENAPEPEIAAKIDNFKEQYSDYGQGRQSALNYHLHQLERLLMPTQVTKMCIWAL---------------------------KQDDAFWEDGEDETS---------LLSILTHDLGLTEEQRKSIQSHRSAVVKICENLRLALQLLHQLKADVEQKNITLDTEMDQLQNILTPTQRAKFIVWVTNNPACMHLLNKLWTNVF 417          
BLAST of NO19G01720 vs. NCBI_GenBank
Match: GAX16095.1 (hypothetical protein FisN_20Hh228 [Fistulifera solaris])

HSP 1 Score: 190.7 bits (483), Expect = 1.100e-44
Identity = 120/316 (37.97%), Postives = 177/316 (56.01%), Query Frame = 0
Query:  138 EKKLRRLEKNRESARECRRRKKEHVVELQKQVALLEAENLKLKLQLKVGEESQAQERQEKGRITKKLDDMVKTGASESDIWQTIDMLKERYSDYGSDRRSAIEFHTNQLEKLLLPTKLTKLCMWMLFNMGDENGQTLSPV--------------------------------------SAPTLLPSPSAHGKPENTSPPS-SATATDAGA-----QAAARHLWSILSEELQVTPDQQASLLEHRGSVVAMDADLDVTAGMLRDLRALIDDKNSSLDQELQEVQKILTPTQTAKFILWITRNPACMHMLNQLWRAVY 410
            EKKLRRLEKNR SARECRRRK+E    L++Q+ +LE ENL+L+LQL++GEE++    +++ ++T+ +DD++K+GASE+DI+  ++  KE+++DYG  RRSAIEFH   +E+LL+PT+ T L +  +     +N    +P                                       S+P  + SP+    P  T P S SA A D        +   + L+  L   L+VTP+Q A+L + R     +D  L+   G+L +LR  +      L+ E   V+ ILTPTQ AKF++W+  N ACMHMLN+LW  VY
Sbjct:  118 EKKLRRLEKNRLSARECRRRKREATENLERQINVLEGENLRLRLQLQIGEEAEDSRLRDQEKLTQDIDDLLKSGASEADIYAQLEEFKEKHADYGKSRRSAIEFHLKNIERLLMPTQTTSLVLQAMQGGAAQNVPETAPTEETKVSRGITMESTAGTNKLGVANTAARSANVQESGLSSSPLPVASPTI---PRPTGPSSQSAIAADTNGSPNPNKMDPKALFQYLVNYLEVTPEQAAALKDSRYVAQELDGCLETALGVLGELRNRLAQTGDDLETEFDNVRSILTPTQAAKFLVWVANNSACMHMLNELWDRVY 430          
BLAST of NO19G01720 vs. NCBI_GenBank
Match: GAX28914.1 (hypothetical protein FisN_20Lh228 [Fistulifera solaris])

HSP 1 Score: 188.7 bits (478), Expect = 4.300e-44
Identity = 121/313 (38.66%), Postives = 179/313 (57.19%), Query Frame = 0
Query:  138 EKKLRRLEKNRESARECRRRKKEHVVELQKQVALLEAENLKLKLQLKVGEESQAQERQEKGRITKKLDDMVKTGASESDIWQTIDMLKERYSDYGSDRRSAIEFHTNQLEKLLLPTKLTKLCMWML-----FNMGDENGQTLSPVSAPTLLPSPSAHGK---------PEN-------TSP-------------PSSATATDAGAQAA-------ARHLWSILSEELQVTPDQQASLLEHRGSVVAMDADLDVTAGMLRDLRALIDDKNSSLDQELQEVQKILTPTQTAKFILWITRNPACMHMLNQLWRAVY 410
            EKKLRRLEKNR SARECRRRK+E    L++Q+ +LE ENL+L+LQL++GEE++    +++ ++T+ +DD++K+GASE+DI+  ++  KE+++DYG  RRSAIEFH   +E+LL+PT+ T L +  +      N+ D   +  + VS    + S +   K         P N       +SP             PSS T T A    +        + L+  L   L+VTP+Q A+L + R     +D  L+    +L +LR  +      L+ E   V+ ILTPTQ AKF++W+  N ACMHMLN+LW  VY
Sbjct:  118 EKKLRRLEKNRLSARECRRRKREATENLERQINVLEGENLRLRLQLQIGEEAEDSRLRDQEKLTQDIDDLLKSGASEADIYAQLEEFKEKHADYGKSRRSAIEFHLKNIERLLMPTQTTSLVLQAMQGGAVQNVPDTASKLETKVSRGISMESTAGTNKVGVTNTATRPANVQESGSSSSPLSMASPTILRPTGPSSQTTTAADTNGSPYPNKMDPKALFQYLVNYLEVTPEQAAALKDSRYVAQELDGCLETALSVLGELRNRLAQTGDDLETEFDNVRSILTPTQAAKFLVWVANNSACMHMLNELWDRVY 430          
BLAST of NO19G01720 vs. NCBI_GenBank
Match: XP_002896351.1 (conserved hypothetical protein [Phytophthora infestans T30-4] >EEY67586.1 conserved hypothetical protein [Phytophthora infestans T30-4])

HSP 1 Score: 166.0 bits (419), Expect = 3.000e-37
Identity = 98/253 (38.74%), Postives = 154/253 (60.87%), Query Frame = 0
Query:  138 EKKLRRLEKNRESARECRRRKKEHVVELQKQVALLEAENLKLKLQLKVGEESQAQERQEKGRITKKLDDMVKTGASESDIWQTIDMLKERYSDYGSDRRSAIEFHTNQLEKLLLPTKLTKLCMWMLFN----MGDENGQTLSPVSAPTLLPSPSAHGKPENTSPPSSATATDAGAQAAARHLWSILSEELQVTPDQQASLLEHRGSVVAMDADLDVTAGMLRDLRALIDDKNSSLDQELQEVQKILTPTQTAK 387
            ++KL +LE+NRESARECRRRK+EH++ ++++   LE EN++L+ QLK G+E+  QE +EK R+ ++L+ M++ GASE ++ + ID  KE+YSDYG  RRSA+ +H +Q+E+LLLPT++TK+C+W L        DE  +T  PV                                        IL++EL ++ DQ+  + + RGS+  +  +L    G+L +L+  + +KNS+LD E+ ++Q ILTPTQ AK
Sbjct:  243 QRKL-KLERNRESARECRRRKREHILGVEERCRQLERENMELRGQLKAGKEAIRQEEKEKNRVCEELEKMIQRGASEKELAEKIDNFKEQYSDYGHGRRSALSYHLHQIERLLLPTQVTKMCIWALRQDDSFWQDEEDETSLPV----------------------------------------ILAKELGLSEDQKKKIQQQRGSISLICENLKSALGLLSELKTEVTNKNSTLDMEMDKLQNILTPTQRAK 454          
BLAST of NO19G01720 vs. NCBI_GenBank
Match: CCA19477.1 (conserved hypothetical protein [Albugo laibachii Nc14])

HSP 1 Score: 165.6 bits (418), Expect = 3.900e-37
Identity = 99/271 (36.53%), Postives = 147/271 (54.24%), Query Frame = 0
Query:  142 RRLEKNRESARECRRRKKEHVVELQKQVALLEAENLKLKLQLKVGEESQAQERQEKGRITKKLDDMVKTGASESDIWQTIDMLKERYSDYGSDRRSAIEFHTNQLEKLLLPTKLTKLCMWMLFN----MGDENGQTLSPVSAPTLLPSPSAHGKPENTSPPSSATATDAGAQAAARHLWSILSEELQVTPDQQASLLEHRGSVVAMDADLDVTAGMLRDLRALIDDKNSSLDQELQEVQKILTPTQTAKFILWITRNPACMHMLNQLWRAV 409
            ++LE+NRESARE RRRK+EH++ ++K+   LE EN++L+ QL  G+E+  QE +EK R+ ++L+ M++ GASE ++ + ID  KE+YSDYG  RRSA+ +H +Q+E+LLLPT++TK+C+W L        DE  +T  PV                                        IL++EL +T DQ+  + + RGS+  +  +                                 TPTQ AKFI+W+T NPACMH+LN+LWR V
Sbjct:  351 QKLERNRESARESRRRKREHIIGVEKRCRQLERENMELRSQLHAGKEAMKQEEREKNRVCEELEKMIQRGASEKELAEKIDNFKEQYSDYGHGRRSALCYHLHQIERLLLPTQVTKMCIWALRQDDSFWQDEEDETSLPV----------------------------------------ILAKELGLTDDQKNRIQQQRGSISKICENXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTPTQRAKFIVWVTNNPACMHLLNKLWRTV 581          
BLAST of NO19G01720 vs. NCBI_GenBank
Match: KUF86790.1 (Ribosomal protein L34 [Phytophthora nicotianae])

HSP 1 Score: 162.9 bits (411), Expect = 2.500e-36
Identity = 97/256 (37.89%), Postives = 149/256 (58.20%), Query Frame = 0
Query:  147 NRESARECRRRKKEHVVELQKQVALLEAENLKLKLQLKVGEESQAQERQEKGRITKKLDDMVKTGASESDIWQTIDMLKERYSDYGSDRRSAIEFHTNQLEKLLLPTKLTKLCMWMLFN----MGDENGQTLSPVSAPTLLPSPSAHGKPENTSPPSSATATDAGAQAAARHLWSILSEELQVTPDQQASLLEHRGSVVAMDADLDVTAGMLRDLRALIDDKNSSLDQELQEVQKILTPTQTAKFILWITRNPACM 399
            NRESARECRRRK+EH++ ++++   LE EN++L+ QLK G+E+  QE +EK R+ ++L+ M++ GASE ++ + ID  KE+YSDYG  RRSA+ +H +Q+E+LLLPT++TK+C+W L        DE  +T  PV                                        IL++EL ++ DQ+  + + RGS+  +  +L    G+L +L+  + +KNS+LD E+ ++Q ILTPTQ AK     T   A M
Sbjct:  251 NRESARECRRRKREHILGVEERCRQLERENMELRGQLKAGKEAIRQEEKEKNRVCEELEKMIQRGASEKELAEKIDNFKEQYSDYGHGRRSALSYHLHQIERLLLPTQVTKMCIWALRQDDSFWQDEEDETSLPV----------------------------------------ILAKELGLSEDQKKKIQQQRGSISLICENLKSALGLLAELKTEVTNKNSTLDMEMDKLQNILTPTQRAKVSAGCTTRLALM 466          
BLAST of NO19G01720 vs. NCBI_GenBank
Match: XP_002896547.1 (conserved hypothetical protein [Phytophthora infestans T30-4] >EEY66993.1 conserved hypothetical protein [Phytophthora infestans T30-4])

HSP 1 Score: 159.8 bits (403), Expect = 2.100e-35
Identity = 97/267 (36.33%), Postives = 166/267 (62.17%), Query Frame = 0
Query:  138 EKKLRRLEKNRESARECRRRKKEHVVELQKQVALLEAENLKLKLQLKVGEESQAQERQEKGRITKKLDDMVKTGASESDIWQTIDMLKERYSDYGSDRRSAIEFHTNQLEKLLLPTKLTKLCMWMLFNMGDENGQTLSPVSAPTLLPSPSAHGKPENTSPPSSATATDAGAQAAARHLWSILSEELQVTPDQQASLLEHRGSVVAMDADLDVTAGMLRDLRALIDDKNSSLDQELQEVQKILTPTQTAKFILWITRNPACMHMLNQL 405
            EKK  R  KN  S RE R+RK + + + + ++  LEAEN+ LK++LK+G+E+   E++EK +I +++ +M++  A+E +I Q ++M K  YSDYG  RR  + FH +++ +LLLPT++TKL ++ +        Q +  +    ++       K +  S P SATAT          LW IL +EL+V+ +QQ  +LE R ++  +  DL+ T  +++ L  + D+KN++L+ ++ ++Q+ILTP+Q  KFI+W+  NPA M+ML++L
Sbjct:  147 EKKQLRRVKNLVSVREFRKRKTKQLEQNEARLRRLEAENMDLKMRLKIGKEAILSEQREKQQIREQMREMLQRNANEQEIAQFLNMYKVTYSDYGPKRREKLHFHLSRIRELLLPTQVTKLSLYSV-------EQGVDMLRRDHVI-------KEDPMSAPESATAT--------MSLWGILVDELEVSDEQQGQILERRAAIKTVRDDLNHTLSIVKKLEEVTDEKNTALEAQVAQLQQILTPSQATKFIIWVKENPAFMYMLDKL 391          
BLAST of NO19G01720 vs. NCBI_GenBank
Match: XP_024582393.1 (camp responsive element modulator [Plasmopara halstedii] >CEG46024.1 camp responsive element modulator [Plasmopara halstedii])

HSP 1 Score: 159.8 bits (403), Expect = 2.100e-35
Identity = 97/274 (35.40%), Postives = 169/274 (61.68%), Query Frame = 0
Query:  131 NSLPQAFEKKLRRLEKNRESARECRRRKKEHVVELQKQVALLEAENLKLKLQLKVGEESQAQERQEKGRITKKLDDMVKTGASESDIWQTIDMLKERYSDYGSDRRSAIEFHTNQLEKLLLPTKLTKLCMWMLFNMGDENGQTLSPVSAPTLLPSPSAHGKPENTSPPSSATATDAGAQAAARHLWSILSEELQVTPDQQASLLEHRGSVVAMDADLDVTAGMLRDLRALIDDKNSSLDQELQEVQKILTPTQTAKFILWITRNPACMHMLNQL 405
            + L +  EKK  R  KN  S RE R+RK + + + + ++  LEA+N+ LK++LK+G+E+   E++EK +I +++  M++  A+E +I Q ++M K  YSDYG  RR  + FH +++ +LLLPT++TK+ ++ +     E G  L       +              PPS++ +T          LW+IL+EEL+V+ +QQ+ +LE R ++  +  DL+ T  +++ L  +ID+KN++L+ ++ ++Q+ILTPTQ  KFI+W+  NPA M+ML++L
Sbjct:  215 HGLVKELEKKQIRRVKNLASVREFRKRKTKQLEQNEARLRQLEADNMDLKMRLKIGKEAILGEQREKQQIKEQMRQMLQQNANEQEIAQFLNMYKVTYSDYGPKRREKLHFHLSRIRELLLPTQVTKMSLYSV-----EQGVDLLRRDDHVI-----------QDDPPSASDST-----IGTTSLWNILAEELEVSCEQQSQILERRVAIKKVRDDLNHTLSIVKKLEEVIDEKNTALEAQVAQLQRILTPTQATKFIIWVKENPAFMYMLDKL 467          
The following BLAST results are available for this feature:
BLAST of NO19G01720 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_012201241.15.000e-4539.85hypothetical protein SPRG_20257 [Saprolegnia paras... [more]
OQR82571.15.000e-4539.85hypothetical protein ACHHYP_15858 [Achlya hypogyna... [more]
XP_008612955.18.600e-4539.85hypothetical protein SDRG_08835 [Saprolegnia dicli... [more]
GAX16095.11.100e-4437.97hypothetical protein FisN_20Hh228 [Fistulifera sol... [more]
GAX28914.14.300e-4438.66hypothetical protein FisN_20Lh228 [Fistulifera sol... [more]
XP_002896351.13.000e-3738.74conserved hypothetical protein [Phytophthora infes... [more]
CCA19477.13.900e-3736.53conserved hypothetical protein [Albugo laibachii N... [more]
KUF86790.12.500e-3637.89Ribosomal protein L34 [Phytophthora nicotianae][more]
XP_002896547.12.100e-3536.33conserved hypothetical protein [Phytophthora infes... [more]
XP_024582393.12.100e-3535.40camp responsive element modulator [Plasmopara hals... [more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL012nonsL012Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR034ncniR034Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR039ngnoR039Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|159907gene_7573Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO19G01720.3NO19G01720.3-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO19G01720.2NO19G01720.2-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO19G01720.1NO19G01720.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO19G01720.3NO19G01720.3Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO19G01720.2NO19G01720.2Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO19G01720.1NO19G01720.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO19G01720 ID=NO19G01720|Name=NO19G01720|organism=Nannochloropsis oceanica|type=gene|length=4031bp
CGTTATCGCTTGCTTCTTTTTCTTCGAGTCAACTCTCTCTTGCTATGACA
AGTTCCTTCCCCAAACGTACCCGGCGGCTGGAAAAAAAGGCCTACAAACG
CAAAGTTGGAACCTTTTTAGCCACACATACCTCCGTCTACTCTTGCACGC
ATTCATGTCTTTCCAAACTGTACACCTGGCGCGTTTGCTGAGACCTGCGG
CCACGGCATTTTTGTTCAGATCAAGTGGTCCAAGCCCCGGCTCATGGATC
GCTCCTCGCTCCCCTAGGTAGTCGATCCTCATTGCCCATGCCTCTTACCA
CACACGCACAGATTCCTCCGACTGGACACGTCTGTAAGAACCTCTTGGGC
CTGTTTTCCGCCCTTCTCGAAGTCGTTACCCCTCAGCTGGCACAGAGgta
agagggcactccgattggatatcatacgtgacggacggagcacacacgta
atgcagagaccaaagccaaaaattcacactggtccccatccccctaacac
aagGCAAAGGCGAAAATCAAAAGAGTGCTGGGGGCGAAAATAGCGCGGAC
AGAGCACAATCCATGGCTACACCAGCAAATGAAGGAGGAGGAGGAGGAGG
AGGAGGAGGAGGAGGAGGTGGCGGTGGTCTCCATCCTCCGCTCCCCAGAC
CAGCTTCAGGTAGCAACCTTCGAAGAGgtacgcaagcagagggcgagagg
ggaaccacatgttgcgtcgtgtaacctttgctcattatttggtgatgtga
tgataacattgtgcgtctaatcccaccaagctcttgactctcctctcttg
tgccccgatttcctccttgcactcaccccaacatctaccaccggccatca
catagTCACATCCAATTCATCCCTACGTCTCCAGCAGCAGCAGCAGCAGC
AACTCCAACTACAGCAGCAACAAGAACTTTATCCCCACGCCAAGTCCGAG
CCACCAAACACCCTGACCATCTCTCCGCACATGCAGCAACTGCAGCACCA
GCAGGAGCAACTATTTATCCCCATGACTAGTCCCAACAGCCACACAAGCC
GAAATCAGCATCAGCAGGACGACGATGACCAAGACTCGCTACAGGGAGGG
GGAGGAGGGGTGTACCAACAAGGGCAAATGAACAGCTTGCCCCAGGCCTT
CGAGAAGAAGCTGCGACGGCTGGAGAAGAACCGAGAGTCAGCTCGTGAAT
GTCGAAGGAGGAAGAAAGAGCACGTGGTGGAGCTCCAGAAGCAGGTAGCC
CTCCTTGAGGCGGAGAACTTGAAGTTGAAGCTGCAACTCAAGGTGGGAGA
GGAGAGCCAGGCGCAGGAGCGGCAGGAGAAGGGTCGGATAACTAAAAAGC
TGGACGATATGgtacgccctgccttctgtcttaatatcggggggaagtgg
gtcgcctcgcaatctgtcatgtctatcaaggctttgtgcgagctctgtcg
tcttccagtcggcagatattcccttgtaacctcgatcatctggccgggga
gcatcgcgtcgtttttactttccattgctccccacttcttcctctctctt
caacagGTGAAAACGGGCGCGAGTGAGTCAGACATCTGGCAGACGATCGA
TATGCTCAAGGAGAGGTACTCGGACTACGGCAGCGATCGACGCTCTGCCA
TTGAGTTTCACACCAACCAGCTCGAGAAGgtacgcgcgtggtgggagact
agggagagaggaaggaagagagaacaattattcacttgttttgttctttt
ctagaagactaatccagtccttgctttcattatacctgaatctttttctc
actgttttgccgcccacttctcctccttccttcccttgcacccctgcagC
TCCTCCTCCCCACCAAACTCACCAAGCTCTGCATGTGGATGCTCTTCAAC
ATGGGCGACGAGAACGGTCAAACTTTATCTCCGGTCTCCGCCCCCACTCT
TCTCCCTTCTCCCTCTGCCCACGGCAAACCCGAGAATACTTCCCCCCCCT
CCTCCGCTACTGCTACTGATGCTGGTGCCCAAGCCGCGGCACGGCATCTT
TGGTCGATTCTCTCAGAAGAACTGCAGGTAACACCAGATCAGCAAGCGTC
CCTCTTAGAGCACCGGGGCAGCGTAGTCGCAATGGACGCTGACTTAGACG
TAACCGCAGGCATGCTCCGCGATCTTCGCGCCCTGATCGACGATAAAAAC
TCGAGTCTGGATCAGGAGCTGCAGGAGGTGCAGAAGATCCTCACTCCCAC
TCAAACAGCCAAGTTTATTCTATGGATTACGCGGAACCCTGCTTGTATGC
ACATGCTCAATCAGTTATGGCGGGCCGTATATGAGCGTTCCGAGGGGGGA
GGAGGAGGAGGAGGAAGACAAGGAGGAGGACAAGGCGGACGACATGGAGG
TGGAGGGAATTTGGGAGGGTTTAGTGGTCATCATCAATGGAGGACCATCG
CTCCGCAAGCGGCTGCTCCTGCTGCTGCGCTTGGAGCTGGGGGAGGTACG
ATCAACGGCAGTATCGGTAGCAGCATGAGTAGTAGCAGTGCCAGTATTGG
AGGTGGGAAGGCGCCGTCACCAGCCCAGCTGCAAGGGTCGTTGATATAAA
TCAAGAATTAACGCAGGAATTTTACAGAAGGGAAAGTGTGATGGGTCTGA
AAAGAGGAAGGGAAATTGTCATATGAAGCGAAATACCCGGCCTTACAGTG
CACACTGGCTTACTTTCTTTCTGAGAGGTAGACTCAATAAAATGAGTTTT
TCAGTATCCCTGTGTGTGTGGATGGGCGCGTGCATATGTTCGAGTGTCTG
TGTGCTGCGAGTGTTCTCCCTTTCGTCCTCGCTCTCTTGATAGAGCGAGT
TCGTTCGATCCATATCTTTAAATCACAACCACCGTCAACATGCTCCGGTT
TACCAGCACACACTCTTCCCCCCTTACTCCCTCCCTTTCCATCAACCTCT
TTCCCCTGCACCGCGCACCCCTTTCTAATTTCCCATTTCATCAGTGTGTC
CTTTGGTGTGACCGACCAGCAGCAAAATTTGAAAACTTAATAAATGGAAG
TAGCACTCACAAGCCCAAAAAACGATACCTGTTGGGAGTTAACAGTGGAA
GCGGTTAAACCGCCTGGCACACCACCAAAGTTGTTAAATCAAAGGCTTTC
ACTTTCACCTCTCCACGCTTCTTCATCACTAGAACCATTATATACCTCCT
TCCCACTCACTTTCACGATAAATTGCCCCTACTAGCTTCCCTCTTTCCCC
TTCGCCTGCCCAGTCTGACTCCTTCTCAATCTCTTCCTTTTCCACCGCCA
TTCCCGTCATCCTTCTGCTTAACCTCCGCAAGGAGAGCCACATGCCGCGC
ATGCTGCTTCTCGAGTTTCGCGCGCAAATTCTTGCTGAGAGGACGCCCTT
TTGCGTCTGCTGTGGGAATCTCCAACTCATCAAACGATGTGAACTTGCCT
TCATATGGGCCCTGCTTGAAAAGCTCCGAAAGGGCAACACTAGCTCTAGG
CCTCTTGTGCTGCCTGCCGACACGTGGCGCAGCCATAGAGGCAGTAGCAG
ACGCCGAAGCAGCAGCAGCAGCGGCAAGTGGAGAAGGAGGAAGATTGGAA
GGAGGTGGAGAAGGAGAGGGAGGAGGAGGAGGAGGGGCTCCCAGAGCCCA
GTGACATTTTCCCACCCCAAGGTCTTTCACCTGCAGACCCAAGCGAGCCA
ACTCACCATCTCGGAAATCATCGCACAAACGCAACAACCTACGCGCAAGC
TCTGTACTACTGCTACTCTTCGGCTTCTCCCCTCCCGTCGCGCCAGTTTC
TCTAAAACACCCATGTTCTTCCCGGTCCTCCAAGGCAGCAGCGCGCACAC
AAGCCCGGAAGTCCACCACAGCCCTAGAAAGAGCCTCTGTGGTGGCAGCT
GTAGTGGCCATGGACGAAGATGACAGAGGGGACGACGAAGAGAAGGACTG
CATAGCATCATCAATGCTCTGCACACCAAATAGTCTCAAAATATAGATCA
CGTACCCTGCCACATTCCTCAGTACCTCCTC
back to top

protein sequence of NO19G01720.3

>NO19G01720.3-protein ID=NO19G01720.3-protein|Name=NO19G01720.3|organism=Nannochloropsis oceanica|type=polypeptide|length=418bp
MQQLQHQQEQLFIPMTSPNSHTSRNQHQQDDDDQDSLQGGGGGVYQQGQM
NSLPQAFEKKLRRLEKNRESARECRRRKKEHVVELQKQVALLEAENLKLK
LQLKVGEESQAQERQEKGRITKKLDDMVKTGASESDIWQTIDMLKERYSD
YGSDRRSAIEFHTNQLEKLLLPTKLTKLCMWMLFNMGDENGQTLSPVSAP
TLLPSPSAHGKPENTSPPSSATATDAGAQAAARHLWSILSEELQVTPDQQ
ASLLEHRGSVVAMDADLDVTAGMLRDLRALIDDKNSSLDQELQEVQKILT
PTQTAKFILWITRNPACMHMLNQLWRAVYERSEGGGGGGGRQGGGQGGRH
GGGGNLGGFSGHHQWRTIAPQAAAPAAALGAGGGTINGSIGSSMSSSSAS
IGGGKAPSPAQLQGSLI*
back to top

protein sequence of NO19G01720.2

>NO19G01720.2-protein ID=NO19G01720.2-protein|Name=NO19G01720.2|organism=Nannochloropsis oceanica|type=polypeptide|length=563bp
MATPANEGGGGGGGGGGGGGGGLHPPLPRPASGSNLRRVTSNSSLRLQQQ
QQQQLQLQQQQELYPHAKSEPPNTLTISPHMQQLQHQQEQLFIPMTSPNS
HTSRNQHQQDDDDQDSLQGGGGGVYQQGQMNSLPQAFEKKLRRLEKNRES
ARECRRRKKEHVVELQKQVALLEAENLKLKLQLKVGEESQAQERQEKGRI
TKKLDDMVRPAFCLNIGGKWVASQSVMSIKALCELCRLPVGRYSLVTSII
WPGSIASFLLSIAPHFFLSLQQVKTGASESDIWQTIDMLKERYSDYGSDR
RSAIEFHTNQLEKLLLPTKLTKLCMWMLFNMGDENGQTLSPVSAPTLLPS
PSAHGKPENTSPPSSATATDAGAQAAARHLWSILSEELQVTPDQQASLLE
HRGSVVAMDADLDVTAGMLRDLRALIDDKNSSLDQELQEVQKILTPTQTA
KFILWITRNPACMHMLNQLWRAVYERSEGGGGGGGRQGGGQGGRHGGGGN
LGGFSGHHQWRTIAPQAAAPAAALGAGGGTINGSIGSSMSSSSASIGGGK
APSPAQLQGSLI*
back to top

protein sequence of NO19G01720.1

>NO19G01720.1-protein ID=NO19G01720.1-protein|Name=NO19G01720.1|organism=Nannochloropsis oceanica|type=polypeptide|length=498bp
MATPANEGGGGGGGGGGGGGGGLHPPLPRPASGSNLRRVTSNSSLRLQQQ
QQQQLQLQQQQELYPHAKSEPPNTLTISPHMQQLQHQQEQLFIPMTSPNS
HTSRNQHQQDDDDQDSLQGGGGGVYQQGQMNSLPQAFEKKLRRLEKNRES
ARECRRRKKEHVVELQKQVALLEAENLKLKLQLKVGEESQAQERQEKGRI
TKKLDDMVKTGASESDIWQTIDMLKERYSDYGSDRRSAIEFHTNQLEKLL
LPTKLTKLCMWMLFNMGDENGQTLSPVSAPTLLPSPSAHGKPENTSPPSS
ATATDAGAQAAARHLWSILSEELQVTPDQQASLLEHRGSVVAMDADLDVT
AGMLRDLRALIDDKNSSLDQELQEVQKILTPTQTAKFILWITRNPACMHM
LNQLWRAVYERSEGGGGGGGRQGGGQGGRHGGGGNLGGFSGHHQWRTIAP
QAAAPAAALGAGGGTINGSIGSSMSSSSASIGGGKAPSPAQLQGSLI*
back to top
Synonyms
Publications