NO19G01710, NO19G01710 (gene) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO19G01710
Unique Name	NO19G01710
Type	gene
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	2898
Alignment location	chr19:515490..518387 +

Link to JBrowse

Properties


Property Name	Value
Description	Cysteinyl-trna synthetase

Mutants

Expression

Analysis:

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Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr19	genome	chr19:515490..518387 +

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
GSE178672	2023-12-15
PRJNA933693	2023-10-26
PRJNA943449	2023-07-19
GSE149904	2020-10-10
NoIMET1_WT_HS	2020-09-29
GSE139615	2020-03-11
PRJNA241382	2020-03-11
BLASTP analysis of N. oceanica IMET1 genes	2019-07-11
InterPro analysis for N. oceanica IMET1 genes	2019-07-11
GO annotation for IMET1v2 genes	2019-07-10
PRJNA182180	2019-04-25
Gene prediction for N. oceanica IMET1	2017-10-24

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR032678	tRNA-synt_1_cat_dom
IPR024909	Cys-tRNA/MSH_ligase

Vocabulary: **Biological Process**
Term	Definition
GO:0006423	cysteinyl-tRNA aminoacylation
GO:0006418	tRNA aminoacylation for protein translation

Vocabulary: **Molecular Function**
Term	Definition
GO:0005524	ATP binding
GO:0004817	cysteine-tRNA ligase activity
GO:0004812	aminoacyl-tRNA ligase activity
GO:0000166	nucleotide binding

Homology

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BLAST of NO19G01710 vs. NCBI_GenBank
Match: EWM23700.1 (cysteinyl-trna synthetase [Nannochloropsis gaditana])

HSP 1 Score: 563.5 bits (1451), Expect = 9.800e-157
Identity = 319/607 (52.55%), Postives = 387/607 (63.76%), Query Frame = 0

Query:   46 SSSLTRLLLDREAASTPNQGVAWKWYACGPTVYDSAHLGHARTYVCQDIIRRVLTNYFGQDVMFAMGVTDVDDKILRRAAEIKEDPWALARRYEAEFWRDMRALNVLEPTAVVRVTEHIDAIIAYVQRIQKNGFAYETSSGVYFDVAAFVKKGFTYRKLRQIEGVQGAGEEIPASAAGGGVRGGEGAVVGREEKRGRRDFALWKRSKAGEEEDMCWDSPWGHGRPGWHIECSAMTHHLLRDRLEIHSGGIDLCFPHHTNEIAQCEAFGYKAEEREGTVEEDGKLGKGCCPSSYAAAPTTAGEEWVKAWLHTGHLYIQGLKMSKSLKNFITVQECLKRHHADDFRIFCLQRRYGANVNYSESAMREAQNLRRQFCNFVSLAISTQHGXXXXXXXXXXXXXXXXXXXXXXKRWGPKEVAVMTELERVKRSVGKALLEGGIDTPEVLRLLQGLVATGHMYMREGREGGSEAGCVE---EVLRNVAGYVIYILRLFGVQSIDDAMQSFSSSSPXXXXXXXXXXXXXEALSRAVVDFRACVRAAALEDREEHGCFRETGATGGEKPKSSSSTELARRLLRLCDDFRDGELARLGLQVKDLGVGKCHWALGAP 650
            +SS   + L +++A  P+   A KWYACGPTVYDSAHLGHARTYV QD+IRRVLT++ GQDV+F MG+TDVDDKIL+RA E KEDP ALARRYEA+F  DMRALNVLEP+A+VRVTEHI  II Y+++I  NG AYETSSGVYFDV AF KK F Y KL+  + V+ A  E P     G        VVG +EK+  RDF LWK +K GE   M WDSPWG GRPGWHIECSAMT HLL   L+IHSGG+DLCFPHHTNEIAQ +AF          + ED                      WV AWLHTGHLYI+GLKMSKSLKNFI+V+E L  H ADDFR+FCLQRR+ A+V+YSESA+ EA++LR+ F NFVSLA    H                       KRWG KE  +M EL RVK  V KA ++GG+DTP+VLRLL+ LV  GH Y+R+G     E    E   EV+ N+A YV  +L L G++  +        S               E+L++++VDFRA VRAAALE R      R        + K  ++  LA+RLL LCD+FR+ +L  LG+QVKD GVG+C W L +P
Sbjct:   41 ASSSPLIPLLKKSAERPSL-EALKWYACGPTVYDSAHLGHARTYVSQDVIRRVLTDFLGQDVIFVMGITDVDDKILQRAMERKEDPRALARRYEADFLADMRALNVLEPSALVRVTEHIRDIIDYIKQIDTNGMAYETSSGVYFDVRAFSKK-FAYGKLKTKDRVRSANAEAPVGREEGQQERIGVDVVGMDEKKDLRDFVLWKFNKPGEAA-MSWDSPWGRGRPGWHIECSAMTQHLLGPHLDIHSGGVDLCFPHHTNEIAQSDAF---------RMSED--------------------PAWVGAWLHTGHLYIKGLKMSKSLKNFISVREFLAGHDADDFRMFCLQRRFDADVDYSESALLEARSLRQVFINFVSLAQQRVH----------------VLSRDGCKRWGAKEFEIMAELARVKVGVRKAFVQGGLDTPQVLRLLRDLVGLGHEYLRQGDGKAEERDGTEARGEVVSNLAAYVAKLLALLGLRCFNQFTLLHRGS---------LSGADVESLAKSLVDFRARVRAAALEGRR-----RRPRDGSDVEEKEGTTAALAQRLLVLCDEFRERDLIELGIQVKDTGVGECSWTLASP 585

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BLAST of NO19G01710 vs. NCBI_GenBank
Match: XP_008861651.1 (cysteine-tRNA ligase [Aphanomyces invadans] >ETW10240.1 cysteine-tRNA ligase [Aphanomyces invadans])

HSP 1 Score: 387.1 bits (993), Expect = 1.300e-103
Identity = 251/686 (36.59%), Postives = 337/686 (49.13%), Query Frame = 0

Query:   62 PNQGVAWKWYACGPTVYDSAHLGHARTYVCQDIIRRVLTNYFGQDVMFAMGVTDVDDKILRRAAEIKEDPWALARRYEAEFWRDMRALNVLEPTAVVRVTEHIDAIIAYVQRIQKNGFAYETSSGVYFDVAAFVKKGFTYRKLRQIEGVQGAGEEIPASAAGGGVRGGEGAVVGREEKRGRRDFALWKRSKAGEEEDMCWDSPWGHGRPGWHIECSAMTHHLLRDRLEIHSGGIDLCFPHHTNEIAQCEAFGYKAEEREGTVEEDGKLGKGCCPSSYAAAPTTAGEEWVKAWLHTGHLYIQGLKMSKSLKNFITVQECLKRHHADDFRIFCLQRRYGANVNYSESAMREAQNLRRQFCNFVSLAISTQHGXXXXXXXXXXXXXXXXXXXXXXKRWGPKEVAVMTELERVKRSVGKALLEGGIDTPEVLRLLQGLVATGHMYMREGREGGSEAGCVEEVLRNVAGYVIYILRLFGVQSIDDAMQSFSSSSPXXXXXXXXXXXXXEALSRAVVDFRACVRAAALEDREEHGCFRETGATGGEKPKSSSSTELARRLLRLCDDFRDGELARLGLQVKDLGVGKCHWALGAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPRVGRQHKRPRASVALSELFKQG-PYEGKFTSFDELEIPTADAKGRPLSKNLRAKLEKQHARH 747
            P      KWY CGPTVYDSAHLGHAR+YV QDI+RRVLT +F Q++   MG+TDVDDKI+  AA  +     +AR  EA F R++  LNVL  +++ RV+EHI  IIAY+Q +  NGFAY TS GVYFD  A    G  Y KL      Q     +P   A GG            EKR  RDFALWK SK+ EE    W+SPWG GRPGWHIECSAMTHH+L D +++HSGG+DL FPHH NEIAQC+A+ + A                                W K ++H GHLYI+GLKMSKSLKNFIT+   L+ + AD FR+FCLQ +Y  NV++SE  MR+A  + ++F +F+    S                          +R    +  V+  L + K+ V  A +    DTP  L+ L  L++  +   ++            EVL  VA Y++  L LFG+ ++     S   ++P               +  A   FRA VRA AL                     +++S ++AR +L LCD+ RD EL  LG+Q++D+  GK  W                                          +          +A +  F Q   ++GKFT+FD+  +PT DA G  L+K  R KL K+  +H
Sbjct:   42 PTSSSPLKWYVCGPTVYDSAHLGHARSYVSQDILRRVLTQHFHQEIFLVMGMTDVDDKIIAAAASQQTTMTNIARTNEAAFLRNLADLNVLRVSSITRVSEHIPEIIAYIQGLGANGFAYVTSDGVYFDTVAM---GAKYGKLAP-NTPQEYDNVVPEDGAVGG------------EKRNVRDFALWKLSKSPEEPG--WESPWGRGRPGWHIECSAMTHHVLGDAIDVHSGGVDLRFPHHNNEIAQCDAYHHHA----------------------------CDHTWCKHFVHFGHLYIKGLKMSKSLKNFITIDSLLETYSADTFRVFCLQYKYNMNVHFSEDRMRDASAIYQRFLSFLQTLQS---------------HVKAAAHSPLSRRVDGVDHTVLAALAQCKQDVDIA-MRHDFDTPRALQHLLDLISHTNKTWKD------HPSMSVEVLCTVATYIVDTLTLFGLATL--RFPSLRLAAPVADDATSLNSIQANDVMDAFTTFRANVRALAL---------------------TNTSDKVARDILNLCDNVRDVELPALGIQLEDVAPGKSFW-------------------KPQQGDDVAAAVDKSSSEKAILAIKAAEFEAEMQIAPASYFCQSRQFQGKFTAFDDQGLPTHDADGVELTKTARKKLAKKLDKH 617

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BLAST of NO19G01710 vs. NCBI_GenBank
Match: XP_008613236.1 (cysteinyl-tRNA synthetase [Saprolegnia diclina VS20] >EQC33113.1 cysteinyl-tRNA synthetase [Saprolegnia diclina VS20])

HSP 1 Score: 384.4 bits (986), Expect = 8.200e-103
Identity = 254/687 (36.97%), Postives = 337/687 (49.05%), Query Frame = 0

Query:   69 KWYACGPTVYDSAHLGHARTYVCQDIIRRVLTNYFGQDVMFAMGVTDVDDKILRRAAEIKEDPWALARRYEAEFWRDMRALNVLEPTAVVRVTEHIDAIIAYVQRIQKNGFAYETSSGVYFDVAAFVKKGFTYRKLRQIEGVQGAGEEIPASAAGGGVRGGEGAVVGREEKRGRRDFALWKRSKAGEEEDMCWDSPWGHGRPGWHIECSAMTHHLLRDRLEIHSGGIDLCFPHHTNEIAQCEAFGYKAEEREGTVEEDGKLGKGCCPSSYAAAPTTAGEEWVKAWLHTGHLYIQGLKMSKSLKNFITVQECLKR--HHADDFRIFCLQRRYGANVNYSESAMREAQNLRRQFCNFVSLAI-----STQHGXXXXXXXXXXXXXXXXXXXXXXKRWGPKEVAVMTELERVKRSVGKALLEGGIDTPEVLRLLQGLVATGHMYMREGREGGSEAGCVEEVLRNVAGYVIYILRLFGVQSIDDAMQSFSSSSPXXXXXXXXXXXXXEALSRAVVDFRACVRAAALEDREEHGCFRETGATGGEKPKSSSSTELARRLLRLCDDFRDGELARLGLQVKDLGVGKCHWALGAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPRVGRQHKRPRASVALSELFKQ-GPYEGKFTSFDELEIPTADAKGRPLSKNLRAKLEKQHARHV 748
            KWY CGPTVYDSAHLGHAR+YV QDI+RRVLT YF  D+   MG+TDVDDKI+  +    +   A+AR +EA F  D+ +LNVL  +A+ RV+EHI  I+AY++ ++ NGFAY TS GVYFD  A    G  Y KL        A  EI   AA       + + +G  EKR  RDFALWKRSK  +E    WDS +G GRPGWHIECSAMTHH+L   +++HSGGIDLCFPHH NE+AQC+ + +                            TTAG  W K ++H GHLYI+GLKMSKSLKNFI++Q+ L      +D FR+FCLQ +Y  NV++SE  MR+A  L ++F +F    +     ST H                       +R       ++T L   K  V +A L    DTP VL  L  L++  H      RE  S    +E V R VA YV+  L LFG+        S + ++P             E++      FRA VR AAL              T  + P+S +       +L LCD  R+  L  LG+Q+ D+  G  HW                                                     +A ++ F++   + G F +FD+  +PT D  G  L+K  R KL K+  +H+
Sbjct:   46 KWYVCGPTVYDSAHLGHARSYVSQDILRRVLTGYFRHDINLVMGMTDVDDKIIATSLREGKPMEAVARHHEAAFLADLASLNVLRASAITRVSEHIPEILAYIKTLEANGFAYTTSDGVYFDTVAL---GAKYGKL-----APNAATEISDVAA------SDDSGIG-SEKRNVRDFALWKRSKTADEPG--WDSRYGRGRPGWHIECSAMTHHVLGGAIDVHSGGIDLCFPHHNNEVAQCDGYHH----------------------------TTAGHTWCKHFIHFGHLYIKGLKMSKSLKNFISIQDFLSAPGSSSDAFRLFCLQYKYNTNVHFSEDRMRDANVLLQRFTSFFQSIVGLTKASTLH-----------------------RRLETPNDVLLTALAEAKVEVDRA-LRNDFDTPAVLLQLTQLISLVH------REVQSRDISIEVVCR-VAAYVLETLHLFGLNKSLAGFSSIALAAPVATTDAGAGLAHAESILDEFTAFRARVRQAAL--------------TNPKDPQSQT-------ILALCDRLRNETLPPLGIQIDDVAPGTSHWKAQTMIEADAAPVDPVKVQLAAKQAAF---------------------EAEMQIAPADFFRRSAQFAGHFGAFDDEGVPTQDENGLDLTKTARKKLLKKLEKHI 614

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BLAST of NO19G01710 vs. NCBI_GenBank
Match: OQR88857.1 (cysteinyl-tRNA synthetase [Achlya hypogyna])

HSP 1 Score: 380.6 bits (976), Expect = 1.200e-101
Identity = 242/683 (35.43%), Postives = 336/683 (49.19%), Query Frame = 0

Query:   69 KWYACGPTVYDSAHLGHARTYVCQDIIRRVLTNYFGQDVMFAMGVTDVDDKILRRAAEIKEDPWALARRYEAEFWRDMRALNVLEPTAVVRVTEHIDAIIAYVQRIQKNGFAYETSSGVYFDVAAFVKKGFTYRKLRQIEGVQGAGEEIPASAAGGGVRGGEGAVVGREEKRGRRDFALWKRSKAGEEEDMCWDSPWGHGRPGWHIECSAMTHHLLRDRLEIHSGGIDLCFPHHTNEIAQCEAFGYKAEEREGTVEEDGKLGKGCCPSSYAAAPTTAGEEWVKAWLHTGHLYIQGLKMSKSLKNFITVQECLKRHHA--DDFRIFCLQRRYGANVNYSESAMREAQNLRRQFCNFVSLAISTQHGXXXXXXXXXXXXXXXXXXXXXXKRWGPKEVAVMTELERVKRSVGKALLEGGIDTPEVLRLLQGLVATGHMYMREGREGGSEAGCVE-EVLRNVAGYVIYILRLFGVQSIDDAMQSFSSSSPXXXXXXXXXXXXXEALSRAVVDFRACVRAAALEDREEHGCFRETGATGGEKPKSSSSTELARRLLRLCDDFRDGELARLGLQVKDLGVGKCHWALGAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPRVGRQHK-RPRASVALSELFKQG-PYEGKFTSFDELEIPTADAKGRPLSKNLRAKLEKQHARH 747
            KWY CGPTVYDSAHLGHAR+YV QDI+RRVLT YF QD+   MG+TDVDDKI+  A        A+AR++EA F  D+ ALNVL  +A+ RV+EHI  I+AY+  +++NGFAY T+ GVYFD  A    G  Y KL      +     +  +  G              EKR  RDFALWKRSK  +E    WDS +G GRPGWHIECSAMTHH+L   +++HSGGIDLCFPHH NE+AQC+ + +                             T G  W K ++H GHLYI+GLKMSKSLKNFI++++ L    A  D FR+FCLQ +Y  NV++S   MR+A  L ++F +F    ++                          +R    +  ++  L R K +V +A+ +   DTP VL  L  L++  H      RE  +  G V  +V+  VA YV+ + +LFG+Q       S + ++P              A+      FRA VR  AL + ++  C                     + +L+LCD  RD  L  LG+Q++D+  G  HW                                       A  V +Q +      V+ +  F+    ++G+++ FD+  +P  D  G  L+K  R KL K+  +H
Sbjct:   47 KWYVCGPTVYDSAHLGHARSYVSQDILRRVLTTYFRQDINLVMGMTDVDDKIIATALREGRSMEAVARQHEAAFLSDLAALNVLRASAITRVSEHIPEILAYITTLERNGFAYRTTDGVYFDTVAL---GDDYGKLAPNAATEATDIVVDDNGIG-------------SEKRNSRDFALWKRSKTTDEPG--WDSDFGRGRPGWHIECSAMTHHVLGGAIDVHSGGIDLCFPHHNNEVAQCDGYHHH----------------------------TPGHTWCKHFVHFGHLYIKGLKMSKSLKNFISIRDFLSEPGASSDAFRVFCLQYKYNTNVHFSLDRMRDANVLLQRFVSFFQTVLALSKS------------------PELCRRLETPDDPLLLGLARAKTAVDRAMRD-DFDTPSVLVELTALMSLVH------RELQARPGAVSVDVVCRVAAYVLEMCQLFGLQQSIAGFSSVALAAPTSAAHEASGLEHANAILDEFSAFRARVRQVALRNPKDPQC---------------------QDILKLCDILRDSTLPPLGIQIEDVAPGTAHW-----------------------KTQVFAAAEVDEDPVKAQLVAKQAEFEADMQVSPANFFRDARQFQGQYSVFDDEGVPVRDNDGNELTKTARKKLIKKLEKH 614

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BLAST of NO19G01710 vs. NCBI_GenBank
Match: ETO69850.1 (cysteine-tRNA ligase [Phytophthora parasitica P1976])

HSP 1 Score: 378.6 bits (971), Expect = 4.500e-101
Identity = 263/718 (36.63%), Postives = 359/718 (50.00%), Query Frame = 0

Query:   56 REAASTPNQGVAWKWYACGPTVYDSAHLGHARTYVCQDIIRRVLTNYFGQDVMFAMGVTDVDDKILRRAAEIKEDPWALARRYEAEFWRDMRALNVLEPTAVVRVTEHIDAIIAYVQRIQKNGFAYET--SSGVYFDVAAFVKKGFTYRKLRQIEGVQGAGEEIPASAAGGGVRGGEGAVVGREE--KRGRRDFALWKRSKAGEEEDMCWDSPWGHGRPGWHIECSAMTHHLLRDRLEIHSGGIDLCFPHHTNEIAQCEAFGYKAEEREGTVEEDGKLGKGCCPSSYAAAPTTAGEEWVKAWLHTGHLYIQGLKMSKSLKNFITVQECLK-RHHADDFRIFCLQRRYGANVNYSESAMREAQNLRRQFCNF-----------VSLAISTQHGXXXXXXXXXXXXXXXXXXXXXXKRWGPKEVAVMTELERVKRSVGKALLEGGIDTPEVLRLLQGLVATGHMYMREGREGGSEAGCVEEVLRNVAGYVIYILRLFGVQSIDDAMQSF----------SSSSPXXXXXXXXXXXXXEALSRAVVDFRACVRAAALEDREEHGCFRETGATGGEKPKSSSSTELARRLLRLCDDFRDGELARLGLQVKDLGVGKCHWALGAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPRVGRQHKRPRASVALSELFKQGP-YEGKFTSFDELEIPTADAKGRPLSKNLRAKLEKQHARH 747
            RE ++TPN     KWYACGPTVYD AHLGHAR YV QDI+RRV     G +V   MGVTDVDDKI++RA E       LAR  E +F+ DM  L V  PTA+ RV+EH+  II Y++ IQ  GFAYE    SGVYF+     + G  Y KL      Q   E++ A+         +  VV  EE  K+  RDFALWK +K  E ++  W SPWG GRPGWHIECSAMTHH+L D+L++H+GG+DL FPHH NEIAQCEA  ++    +                          EEW K ++H GHLYI+G KMSKSLKNFI+V++ L+  H AD FR+FCLQ +Y AN+ YSE  +R+A+ +  +   F           +S +  TQH                       KR    ++ ++  L   +  V  ALL+  +DTP  L L+  LV+ G+ Y+   R G +EA   +EVL ++  YV+ +L LFG++ +     +            +                EAL R+++ FRA VR  AL D ++ G                       R+L LCDD R+ EL +LG+Q++DL  G+  + L                                       +  +Q       ++ SE FK  P + G+F +FD    PT +  G PL+K+ R KL K+ A+H
Sbjct:   55 RETSATPN---VLKWYACGPTVYDRAHLGHARAYVSQDILRRVAERTGGYNVQLVMGVTDVDDKIIKRAKEKNVSFETLAREQEQQFFADMTKLYVKPPTAITRVSEHLPEIIKYIKEIQNKGFAYEAVDGSGVYFNTQ---QLGDKYGKLDPRRQTQ-QDEQLLAAFE-------QSDVVEEEEKVKKDPRDFALWKAAK--EPDEPAWPSPWGMGRPGWHIECSAMTHHVLGDKLDVHTGGVDLRFPHHNNEIAQCEAHNHQQCNHD--------------------------EEWCKHFVHFGHLYIRGRKMSKSLKNFISVRDFLQDGHTADHFRLFCLQFKYRANLVYSEDRVRDAEAVADRLRGFFRSVTAYGDHEISSSGHTQH--------------------IKSKRCEQLDLELLDALFATRAQVDAALLD-DLDTPRALSLVLELVSRGNTYLLASR-GDTEA--PDEVLMSLTDYVLDVLDLFGLEGLHAEFSTMMRRRFTSRHSETQHKVEESDELVSRDDHEALLRSLLKFRASVREEALRDPKQPG---------------------NARVLSLCDDLRNKELPQLGIQIEDLSPGRSVFKL------------------LSRTERKAETEDTKTTATHTLKQKQQEFDALMQISPSEFFKNAPEFTGRFNTFDADGFPTHE-HGEPLTKSQRKKLAKKLAKH 666

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BLAST of NO19G01710 vs. NCBI_GenBank
Match: XP_009822634.1 (cysteine-tRNA ligase [Aphanomyces astaci] >ETV87771.1 cysteine-tRNA ligase [Aphanomyces astaci])

HSP 1 Score: 377.5 bits (968), Expect = 1.000e-100
Identity = 263/722 (36.43%), Postives = 355/722 (49.17%), Query Frame = 0

Query:   35 RRHGTSISSS---VSSSLTRLLLDREAASTPNQGVAWKWYACGPTVYDSAHLGHARTYVCQDIIRRVLTNYFGQDVMFAMGVTDVDDKILRRAAEIKEDPWALARRYEAEFWRDMRALNVLEPTAVVRVTEHIDAIIAYVQRIQKNGFAYETSSGVYFDVAAFVKKGFTYRKLRQIEGVQGAGEEIPASAAGGGVRGGEGAVVGREEKRGRRDFALWKRSKAGEEEDMCWDSPWGHGRPGWHIECSAMTHHLLRDRLEIHSGGIDLCFPHHTNEIAQCEAFGYKAEEREGTVEEDGKLGKGCCPSSYAAAPTTAGEEWVKAWLHTGHLYIQGLKMSKSLKNFITVQECLKRHHADDFRIFCLQRRYGANVNYSESAMREAQNLRRQFCNFV----SLAISTQHGXXXXXXXXXXXXXXXXXXXXXXKRWGPKEVAVMTELERVKRSVGKALLEGGIDTPEVLR-LLQGLVATGHMYMREGREGGSEAGCVEEVLRNVAGYVIYILRLFGVQSIDDAMQSFSSSSPXXXXXXXXXXXXXEA-LSRAVVDFRACVRAAALEDREEHGCFRETGATGGEKPKSSSSTELARRLLRLCDDFRDGELARLGLQVKDLGVGKCHWALGAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPRVGRQHKRPRASVALSELFKQGP-YEGKFTSFDELEIPTADAKGRPLSKNLRAKLEKQHARH 747
            RR  T +S       +SLT  L    ++S+P      KWY CGPTVYDSAHLGHAR+YV QDI+RR++T +F QD+   MG+TDVDDKI+  A+  +     +AR +E  F R++ ALNVL  +++ RV+EHI  II Y+Q +  NGFAY TS GVYFD  A    G +Y KL      +     +   A GG             EKR  RDFALWK SK  +E    W+SPWG GRPGWHIECSAMTHH+L   +++HSGG+DL FPHH NEIAQC+A+ +    R         L  G C   Y+    T    W + ++H GHLYI+GLKMSKSLKNFIT+   L  + AD FR+FCLQ +Y  NV++S   MR+A  +  +F +F     S   +T+ G                      +R    +  V+  L + K  V  A L    DTP  L+ LL+ + AT   +               EVL  VA YV+  L LFG+ ++     S   ++P              A +      FRA VRA AL                     +++S ++A+ +L+LCD  RD +L  LG+Q++D+  GK  W                                       A     + + P AS      F+  P + GKFT+FD   +PT DA G  L+K  R KL K+  +H
Sbjct:   16 RRLSTGVSKPPLVAMNSLTGRLDTFPSSSSP-----LKWYVCGPTVYDSAHLGHARSYVSQDILRRIVTQHFHQDIFLVMGMTDVDDKIIAAASAQQTSMANVARHHETAFLRNLAALNVLRVSSITRVSEHIPEIIGYIQGLDSNGFAYATSDGVYFDTVAM---GSSYGKLAPSTPQEYTDIVLEDGAVGG-------------EKRNVRDFALWKLSKTPDEPG--WESPWGRGRPGWHIECSAMTHHVLGGSIDVHSGGVDLRFPHHNNEIAQCDAYHHHQAGR--------YLMVGSCVCFYSGVDHT----WCQHFVHFGHLYIKGLKMSKSLKNFITIDALLANYSADAFRLFCLQYKYNVNVHFSHDRMRDANAVYHRFHSFFHTLQSHVKATEAG----------------GASEHARRVDAADFRVLDALAQCKLEVDSA-LRLDFDTPGALQHLLELVTATNKAWT-------DRPAMSVEVLCAVATYVMDTLALFGLDAL--RFPSLRLAAPVADDAASQSNAIQGADVMDVFTTFRAQVRALAL---------------------TNTSDKVAQDILKLCDTVRDAQLPSLGIQIEDISPGKSFW------------------KQQIDAVEDNTSTEKAVLAAKAAEFEAEMQVPPAS-----FFQLSPQFAGKFTAFDHEGLPTHDADGTELTKTARKKLAKKLDKH 632

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BLAST of NO19G01710 vs. NCBI_GenBank
Match: XP_012200235.1 (cysteinyl-tRNA synthetase [Saprolegnia parasitica CBS 223.65] >KDO29065.1 cysteinyl-tRNA synthetase [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 375.6 bits (963), Expect = 3.800e-100
Identity = 253/719 (35.19%), Postives = 340/719 (47.29%), Query Frame = 0

Query:   38 GTSISSSVSSSLTRL--LLDREAASTPNQGVAWKWYACGPTVYDSAHLGHARTYVCQDIIRRVLTNYFGQDVMFAMGVTDVDDKILRRAAEIKEDPWALARRYEAEFWRDMRALNVLEPTAVVRVTEHIDAIIAYVQRIQKNGFAYETSSGVYFDVAAFVKKGFTYRKLRQIEGVQGAGEEIPASAAGGGVRGGEGAVVGREEKRGRRDFALWKRSKAGEEEDMCWDSPWGHGRPGWHIECSAMTHHLLRDRLEIHSGGIDLCFPHHTNEIAQCEAFGYKAEEREGTVEEDGKLGKGCCPSSYAAAPTTAGEEWVKAWLHTGHLYIQGLKMSKSLKNFITVQECLKR--HHADDFRIFCLQRRYGANVNYSESAMREAQNLRRQFCNFVSLAI-----STQHGXXXXXXXXXXXXXXXXXXXXXXKRWGPKEVAVMTELERVKRSVGKALLEGGIDTPEVLRLLQGLVATGHMYMREGREGGSEAGCVEEVLRNVAGYVIYILRLFGVQSIDDAMQSFSSSSPXXXXXXXXXXXXXEALSRAVVDFRACVRAAALEDREEHGCFRETGATGGEKPKSSSSTELARRLLRLCDDFRDGELARLGLQVKDLGVGKCHWALGAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPRVGRQHKRPRASVALSELFKQ-GPYEGKFTSFDELEIPTADAKGRPLSKNLRAKLEKQHARH 747
            G  + SS S  +T L  L  +  A         KWY CGPTVYDSAHLGHAR+YV QDI+RRVLT YF  D+   MG+TDVDDKI+  +    +   A+AR +EA F  D+ +LNVL  +A+ RV+EHI  I+AY++ ++ NGFAY TS GVYFD  A                  GA +   A  +G G            EKR  RDFALWKRSK  +E    WDS +G GRPGWHIECSAMTHH+L   +++HSGGIDLCFPHH NE+AQC+ + +                             +AG  W K ++H GHLYI+GLKMSKSLKNFI++Q+ L      +D FR+FCLQ +Y  NV++SE  MR+A  L ++F +F    +     ST H                       +R    +  ++T L   K  V +A L    DTP VL  L  L++  H      RE  +    +E V R +A YV+  L LFG+        S + ++P             E +      FRA VR  AL +                 PK   S    + +L LCD  R+  L  LG+Q+ D+  G  HW   A                                                 +A ++ F++   + G+F +FD+  +PT D  G  L+K  R KL K+  +H
Sbjct:   13 GRRLLSSASRPITALNSLSGKVEALPVASSGPLKWYVCGPTVYDSAHLGHARSYVSQDILRRVLTGYFRHDINLVMGMTDVDDKIIATSLREGKPMEAVARHHEAAFLADLASLNVLRASAITRVSEHIPEILAYIETLEANGFAYTTSDGVYFDTVAL-----------------GADDAAAADDSGIG-----------SEKRNVRDFALWKRSKTADEPG--WDSRYGRGRPGWHIECSAMTHHVLGGSIDVHSGGIDLCFPHHNNEVAQCDGYHH----------------------------NSAGHTWCKHFIHFGHLYIKGLKMSKSLKNFISIQDFLSAPGSSSDAFRLFCLQYKYNTNVHFSEDRMRDANVLLQRFTSFFQAVVGLTKASTPH-----------------------RRLETPDDVLLTALAEAKVEVDRA-LRNDFDTPAVLMQLTQLISLVH------REVQARKISIEVVCR-LAAYVLETLHLFGLDKSLTGFSSIALAAPVAASDAGAGLAHAENILDEFTAFRARVRQVALAN-----------------PKDPQS----QAILALCDQLRNETLPPLGIQIDDVAPGTSHWKAQAMIEADAAPEDPVKTQLAAKQAAF---------------------EAEMQIAPADFFRRSNQFAGQFRAFDDEGVPTQDEHGVELTKTARKKLMKKLEKH 600

[Close]

BLAST of NO19G01710 vs. NCBI_GenBank
Match: OQS07834.1 (cysteinyl-tRNA synthetase, partial [Thraustotheca clavata])

HSP 1 Score: 373.6 bits (958), Expect = 1.400e-99
Identity = 254/722 (35.18%), Postives = 356/722 (49.31%), Query Frame = 0

Query:   32 IAYRRHGTSISSSVSSSLTRL-LLDREAASTPNQGVAWKWYACGPTVYDSAHLGHARTYVCQDIIRRVLTNYFGQDVMFAMGVTDVDDKILRRAAEIKEDPWALARRYEAEFWRDMRALNVLEPTAVVRVTEHIDAIIAYVQRIQKNGFAYETSSGVYFDVAAFVKKGFTYRKLRQIEGVQGAGEEIPASAAGGGVRGGEGAVVGREEKRGRRDFALWKRSKAGEEEDMCWDSPWGHGRPGWHIECSAMTHHLLRDRLEIHSGGIDLCFPHHTNEIAQCEAFGYKAEEREGTVEEDGKLGKGCCPSSYAAAPTTAGEEWVKAWLHTGHLYIQGLKMSKSLKNFITVQECLKRHHA--DDFRIFCLQRRYGANVNYSESAMREAQNLRRQFCNFVSLAIS-TQHGXXXXXXXXXXXXXXXXXXXXXXKRWGPKEVAVMTELERVKRSVGKALLEGGIDTPEVLRLLQGLVATGHMYMREGREGGSEAGCVEEVLRNVAGYVIYILRLFGVQSIDDAMQSFSSSSPXXXXXXXXXXXXXEALSRAVVDFRACVRAAALEDREEHGCFRETGATGGEKPKSSSSTELARRLLRLCDDFRDGELARLGLQVKDLGVGKCHWALGAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPRVGRQHK-RPRASVALSELFKQG-PYEGKFTSFDELEIPTADAKGRPLSKNLRAKLEKQHARHV 748
            I   R   S+ S  SS +  +  L       P      KWY CGPTVYDSAHLGHARTYV QDI+RR+LTNYF QD+   MG+TDVDDKI+  A  +K+    +A  +E  F +D+ ALNVL  +++ RV+EHI  II Y++ +++NGFAY TS G+YFD  A    G  Y KL          E          V  G G+     EKR  RDFALWKRSK   E++  W+SP+G GRPGWHIECSAMTHH+L   +++HSGGIDLCFPHH NE+AQC+ + +K                            T G  W K ++H GHLYI+GLKMSKSLKNFI+++E LK   A  D FR+FCLQ +Y  NV++S   MR+A  L ++F +F    ++ T+ G                      +R    +  ++  L + K  + +A L    DTPEVL  L  L++  +  ++  R    EA C       VA +V+ + +L G++   D++  F+S S               A   A++D    +RA            R+   T  + P+  S       +L+LCD  RD  L  +G+Q+ D+  G+ HW L                                     A    +Q +      +     F++   ++GKFT FD+  IP  D  G+  +K+ R KL K+  +H+
Sbjct:   12 IRVHRGWNSLHSKASSRILAMNSLSGTLDPLPQSSEPLKWYVCGPTVYDSAHLGHARTYVSQDILRRILTNYFRQDINMVMGMTDVDDKIIATAQRLKKSMTEVAGAHEDAFLKDLAALNVLRASSITRVSEHIPEIIQYIETLKQNGFAYATSDGMYFDTVAL---GSEYGKLAPNAATIEDNEV---------VEEGIGS-----EKRNARDFALWKRSKT--EDEPGWESPFGRGRPGWHIECSAMTHHVLGGSIDVHSGGIDLCFPHHNNEVAQCDGYHHK----------------------------TPGHVWCKHFIHFGHLYIKGLKMSKSLKNFISIEEFLKEPSASSDAFRLFCLQYKYNTNVHFSLDRMRDANVLLQRFVSFFQTVLTMTKAG-------------------NTSRRLESADDIILVSLYQTKVKIDQA-LRNDFDTPEVLLQLTNLMSLVNREIKV-RHIPIEAVC------QVATFVLEMCQLLGLK---DSISGFASISLAASTAPEQASDLQNA--TAILDAFTALRAQV----------RQVALTNTKDPQFQS-------ILQLCDRIRDQTLPPMGIQIDDVSSGQSHWKL-----------------QPYQKPETLSNNSSNVDPVKAQLAAKQAEFEAEMQIPPENYFQESKQFKGKFTEFDQDGIPLTDENGQIWTKSGRKKLLKKLEKHI 620

[Close]

BLAST of NO19G01710 vs. NCBI_GenBank
Match: ETK81238.1 (cysteine-tRNA ligase [Phytophthora parasitica] >ETL34669.1 cysteine-tRNA ligase [Phytophthora parasitica] >ETM41165.1 cysteine-tRNA ligase [Phytophthora parasitica] >ETP10947.1 cysteine-tRNA ligase [Phytophthora parasitica CJ01A1])

HSP 1 Score: 371.3 bits (952), Expect = 7.200e-99
Identity = 258/716 (36.03%), Postives = 350/716 (48.88%), Query Frame = 0

Query:   56 REAASTPNQGVAWKWYACGPTVYDSAHLGHARTYVCQDIIRRVLTNYFGQDVMFAMGVTDVDDKILRRAAEIKEDPWALARRYEAEFWRDMRALNVLEPTAVVRVTEHIDAIIAYVQRIQKNGFAYET--SSGVYFDVAAFVKKGFTYRKLRQIEGVQGAGEEIPASAAGGGVRGGEGAVVGREEKRGRRDFALWKRSKAGEEEDMCWDSPWGHGRPGWHIECSAMTHHLLRDRLEIHSGGIDLCFPHHTNEIAQCEAFGYKAEEREGTVEEDGKLGKGCCPSSYAAAPTTAGEEWVKAWLHTGHLYIQGLKMSKSLKNFITVQECLK-RHHADDFRIFCLQRRYGANVNYSESAMREAQNLRRQFCNF-----------VSLAISTQHGXXXXXXXXXXXXXXXXXXXXXXKRWGPKEVAVMTELERVKRSVGKALLEGGIDTPEVLRLLQGLVATGHMYMREGREGGSEAGCVEEVLRNVAGYVIYILRLFGVQSIDDAMQSF----------SSSSPXXXXXXXXXXXXXEALSRAVVDFRACVRAAALEDREEHGCFRETGATGGEKPKSSSSTELARRLLRLCDDFRDGELARLGLQVKDLGVGKCHWALGAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPRVGRQHKRPRASVALSELFKQGP-YEGKFTSFDELEIPTADAKGRPLSKNLRAKLEKQHARH 747
            RE ++TPN     KWYACGPTVYDSAHLGHAR YV QDI+RRV     G +V   MGVTDVDDKI++RA E       LAR  E +F+ DM  L V  PTA+ RV+EH+  II Y++ IQ  GFAYE    SGVYF+     + G  Y KL      Q                           K+  RDFALWK +K  E ++  W SPWG GRPGWHIECSAMTHH+L D+L++H+GG+DL FPHH NEIAQCEA  ++    +                          EEW K ++H GHLYI+G KMSKSLKNFI+V++ L+  H AD FR+FCLQ +Y AN+ YSE  +R+A+ +  +   F           +S +  TQH                       KR    ++ ++  L   +  V  ALL+  +DTP  L L+  LV+ G+ Y+   R G +EA   +EVL ++  YV+ +L LFG++ +     +            +                EAL R+++ FRA VR  AL D ++ G                       R+L LCDD R+ EL +LG+Q++DL  G+  + L                                       +  +Q       ++ SE FK  P + G+F +FD    PT +  G PL+K+ R KL K+ A+H
Sbjct:   55 RETSATPN---VLKWYACGPTVYDSAHLGHARAYVSQDILRRVAERTGGYNVQLVMGVTDVDDKIIKRAKEKNVSFETLAREQEQQFFADMTKLYVKPPTAITRVSEHLPEIIKYIKEIQNKGFAYEAVDGSGVYFNTQ---QLGDKYGKLDPRRQTQQXXXXXXXXXXXXXXXXXXXV------KKDPRDFALWKAAK--EPDEPAWPSPWGMGRPGWHIECSAMTHHVLGDKLDVHTGGVDLRFPHHNNEIAQCEAHNHQQCNHD--------------------------EEWCKHFVHFGHLYIRGRKMSKSLKNFISVRDFLQDGHTADHFRLFCLQFKYRANLVYSEDRVRDAEAVADRLRGFFRSVTAYGDHEISSSGHTQH--------------------IKSKRCEQLDLELLDALFATRAQVDAALLD-DLDTPRALSLVLELVSRGNTYLLASR-GDTEA--PDEVLMSLTDYVLDVLDLFGLEGLHAEFSTMMRRRFTSRHSETQHKVEESDELVSRDDHEALLRSLLKFRASVREEALRDPKQPG---------------------NARVLSLCDDLRNKELPQLGIQIEDLSPGRSVFKL------------------LSRTERKAETEDTKTTATHTLKQKQQEFDALMQISPSEFFKNAPEFTGRFNTFDADGFPTHE-HGEPLTKSQRKKLAKKLAKH 666

[Close]

BLAST of NO19G01710 vs. NCBI_GenBank
Match: ETL87929.1 (cysteine-tRNA ligase, partial [Phytophthora parasitica])

HSP 1 Score: 369.8 bits (948), Expect = 2.100e-98
Identity = 258/716 (36.03%), Postives = 349/716 (48.74%), Query Frame = 0

Query:   56 REAASTPNQGVAWKWYACGPTVYDSAHLGHARTYVCQDIIRRVLTNYFGQDVMFAMGVTDVDDKILRRAAEIKEDPWALARRYEAEFWRDMRALNVLEPTAVVRVTEHIDAIIAYVQRIQKNGFAYET--SSGVYFDVAAFVKKGFTYRKLRQIEGVQGAGEEIPASAAGGGVRGGEGAVVGREEKRGRRDFALWKRSKAGEEEDMCWDSPWGHGRPGWHIECSAMTHHLLRDRLEIHSGGIDLCFPHHTNEIAQCEAFGYKAEEREGTVEEDGKLGKGCCPSSYAAAPTTAGEEWVKAWLHTGHLYIQGLKMSKSLKNFITVQECLK-RHHADDFRIFCLQRRYGANVNYSESAMREAQNLRRQFCNF-----------VSLAISTQHGXXXXXXXXXXXXXXXXXXXXXXKRWGPKEVAVMTELERVKRSVGKALLEGGIDTPEVLRLLQGLVATGHMYMREGREGGSEAGCVEEVLRNVAGYVIYILRLFGVQSIDDAMQSF----------SSSSPXXXXXXXXXXXXXEALSRAVVDFRACVRAAALEDREEHGCFRETGATGGEKPKSSSSTELARRLLRLCDDFRDGELARLGLQVKDLGVGKCHWALGAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPRVGRQHKRPRASVALSELFKQGP-YEGKFTSFDELEIPTADAKGRPLSKNLRAKLEKQHARH 747
            RE ++TPN     KWYACGPTVYD AHLGHAR YV QDI+RRV     G +V   MGVTDVDDKI++RA E       LAR  E +F+ DM  L V  PTA+ RV+EH+  II Y++ IQ  GFAYE    SGVYF+     + G  Y KL      Q                           K+  RDFALWK +K  E ++  W SPWG GRPGWHIECSAMTHH+L D+L++H+GG+DL FPHH NEIAQCEA  ++    +                          EEW K ++H GHLYI+G KMSKSLKNFI+V++ L+  H AD FR+FCLQ +Y AN+ YSE  +R+A+ +  +   F           +S +  TQH                       KR    ++ ++  L   +  V  ALL+  +DTP  L L+  LV+ G+ Y+   R G +EA   +EVL ++  YV+ +L LFG++ +     +            +                EAL R+++ FRA VR  AL D ++ G                       R+L LCDD R+ EL +LG+QV+DL  G+  + L                                       +  +Q       ++ SE FK  P + G+F +FD    PT +  G PL+K+ R KL K+ A+H
Sbjct:   64 RETSATPN---VLKWYACGPTVYDRAHLGHARAYVSQDILRRVAERTGGYNVQLVMGVTDVDDKIIKRAKEKNVSFETLAREQEQQFFADMTKLYVKPPTAITRVSEHLPEIIKYIKEIQNKGFAYEAVDGSGVYFNTQ---QLGDKYGKLDPRRQTQQXXXXXXXXXXXXXXXXXXXV------KKDPRDFALWKAAK--EPDEPAWPSPWGMGRPGWHIECSAMTHHVLGDKLDVHTGGVDLRFPHHNNEIAQCEAHNHQQCNHD--------------------------EEWCKHFVHFGHLYIRGRKMSKSLKNFISVRDFLQDGHTADHFRLFCLQFKYRANLVYSEDRVRDAEAVADRLRGFFRSVTAYGDHEISSSGHTQH--------------------IKSKRCEQLDLELLDALFATRAQVDAALLD-DLDTPRALSLVLELVSRGNTYLLASR-GDTEA--PDEVLMSLTDYVLDVLDLFGLEGLHAEFSTMMRRRFTSRHSQTQHKVEESDELVSRDDHEALLRSLLKFRASVREEALRDPKQPG---------------------NARVLSLCDDLRNKELPQLGIQVEDLSPGRSVFKL------------------LSGTERKGETEDTKTTATHTLKQKQQEFDALMQISPSEFFKNAPEFTGRFNTFDADGFPTHE-HGEPLTKSQRKKLAKKLAKH 675

The following BLAST results are available for this feature:

BLAST of NO19G01710 vs. NCBI_GenBank

BLAST of NO19G01710 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20


Match Name	E-value	Identity	Description
EWM23700.1	9.800e-157	52.55	cysteinyl-trna synthetase [Nannochloropsis gaditan...	[more]
XP_008861651.1	1.300e-103	36.59	cysteine-tRNA ligase [Aphanomyces invadans] >ETW10...	[more]
XP_008613236.1	8.200e-103	36.97	cysteinyl-tRNA synthetase [Saprolegnia diclina VS2...	[more]
OQR88857.1	1.200e-101	35.43	cysteinyl-tRNA synthetase [Achlya hypogyna]	[more]
ETO69850.1	4.500e-101	36.63	cysteine-tRNA ligase [Phytophthora parasitica P197...	[more]
XP_009822634.1	1.000e-100	36.43	cysteine-tRNA ligase [Aphanomyces astaci] >ETV8777...	[more]
XP_012200235.1	3.800e-100	35.19	cysteinyl-tRNA synthetase [Saprolegnia parasitica ...	[more]
OQS07834.1	1.400e-99	35.18	cysteinyl-tRNA synthetase, partial [Thraustotheca ...	[more]
ETK81238.1	7.200e-99	36.03	cysteine-tRNA ligase [Phytophthora parasitica] >ET...	[more]
ETL87929.1	2.100e-98	36.03	cysteine-tRNA ligase, partial [Phytophthora parasi...	[more]

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Relationships

This gene is member of the following syntenic_region feature(s):


Feature Name	Unique Name	Species	Type
nonsL012	nonsL012	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ncniR034	ncniR034	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ngnoR039	ngnoR039	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region

This gene is orthologous to the following gene feature(s):


Feature Name	Unique Name	Species	Type
NSK004512	NSK004512	Nannochloropsis salina (N. salina CCMP1776)	gene

The following polypeptide feature(s) derives from this gene:


Feature Name	Unique Name	Species	Type
NO19G01710.1	NO19G01710.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide
NO19G01710.2	NO19G01710.2-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide
NO19G01710.3	NO19G01710.3-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following gene feature(s) are orthologous to this gene:


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|641242	gene_7571	Nannochloropsis oceanica (N. oceanica CCMP1779)	gene
CYSRS	gene6782	Nannochloropsis gaditana (N. gaditana B-31)	gene

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
NO19G01710.1	NO19G01710.1	Nannochloropsis oceanica (N. oceanica IMET1)	mRNA
NO19G01710.2	NO19G01710.2	Nannochloropsis oceanica (N. oceanica IMET1)	mRNA
NO19G01710.3	NO19G01710.3	Nannochloropsis oceanica (N. oceanica IMET1)	mRNA

Sequences

The following sequences are available for this feature:

gene sequence
protein sequence
protein sequence
protein sequence

gene sequence

>NO19G01710 ID=NO19G01710|Name=NO19G01710|organism=Nannochloropsis oceanica|type=gene|length=2898bp
TCTCCGTCCCTGGGTGATGACTGTCGCGGCGGGATGTATGTAGAGAATAC
GTGTGGGCTTGTGCGCACACAAAGAATTTTGAAGTATCAAAAAACGGCCC
GCATATCATCATCGTGCGACCCTCGGTGAGACCTCCTCCCTCTCTCCCTC
CCATCCCTGTTACACGCGCACAACGCTCCATATGACACACACATACGCAC
AGATACAAGAAGTATCATGACAACAGCAAGTACGAGGATCGCAACCTGTC
AATAGTGCCCACTATCTCATAATGTGGGGCAAACAGCGTGTAGGGTTCGC
CTCGCGGCGGCTTTTGCTCGGGGTCAGGGGGGGCTGCCATGCTCAAGGCT
CCTCCGGTTGGGTCATCGCATACCGCCGCCACGGCACATCCATCTCTTCC
TCGGTTTCCTCGTCCCTGACACGCCTGTTGTTGGATCGAGAGGCGGCATC
CACCCCCAATCAAGGGGTGGCATGGAAGTGGTATGCATGCGGCCCGACCG
TGTACGATTCGGCCCACCTAGGCCATGCGCGAACCTACGTCTGCCAAGAC
ATTATTCGCCGGGTACTTACAAATTATTTCGGCCAAGACGTGATGTTTGC
TATGGGCGTCACGGACGTGGACGACAAGATCCTCCGGCGGGCTGCGGAAA
TGTACGCTTCTTTCTCTTTTCCAACACCATGCCAAGTTGTCCTCCCCTTA
CGTTTACCTCTCACCATCCCCCCAAAACCTCATAAACGTAGCAAAGAAGA
TCCCTGGGCTCTAGCCCGTCGATATGAAGCCGAATTTTGGAGGGACATGC
GGGCACTGAACGTGCTGGAACCCACGGCCGTGGTGCGCGTCACGGAGCAC
ATTGACGCCATAATTGCTTATGTTCAGCGGATCCAAAAGAATGGATTTGC
GTACGAGACGAGCAGCGGGGTTTATTTTGATGTGGCGGCTTTTGTAAAGA
AGGGTTTCACATACAGAAAGCTGAGGCAGATAGAGGGAGTGCAGGGGGCG
GGGGAGGAGATACCGGCATCAGCAGCGGGAGGAGGAGTAAGAGGAGGAGA
AGGAGCTGTAGTGGGCCGGGAGGAAAAGAGGGGTAGGCGTGATTTTGCAC
TGTGgtaggtagaggcgggaagggagaagcttttgattttcggtcgcttg
gacctgcacacctcaatacacgtcttcatcccctccctcacccctattcc
tcccttcttcttaacagGAAACGAAGTAAGGCAGGCGAGGAAGAAGACAT
GTGTTGGGATTCTCCGTGGGGTCATGGGCGGCCAGGCTGGCACATTGAAT
GCTCGGCGATGACTCACCATTTGCTACGGGATCGGCTGGAGATCCACTCC
GGCGGCATTGATTTGTGTTTTCCCCATCATACGAATGAGATTGCACAGTG
TGAGGCTTTTGGATACAAAGCGGAGGAAAGAGAAGGGACAGTGGAAGAGG
ATGGGAAGCTCGGCAAGGGATGTTGTCCATCTTCTTATGCTGCTGCTCCC
ACCACTGCTGGGGAGGAGTGGGTGAAGGCGTGGCTACACACCGGACATCT
GTATATCCAGGGTTTGAAGATGAGTAAGAGCCTAAAAAACTTCATCACGG
TGCAGGAGTGCTTGAAGAGGCATCATGCGGATGATTTTAGGATTTTTTGT
TTGCAGCGCCGGTATGGGGCGAATGTGAATTACAGgtgcgtaggaggaca
ctcgaggatgagaaagagggataggggaatcataggggaaccggacccta
ctacccgaactcgcacatacaccttccttgttctcgctctccccgaatca
cacagCGAAAGCGCCATGCGAGAAGCCCAAAATCTCCGCCGGCAGTTCTG
CAACTTTGTTTCCCTCGCCATTTCAACACAACATGGCAGCAGCAGCAGCA
GCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCATAAGGAGCAAA
AGTAAGCGATGGGGCCCGAAAGAAGTAGCGGTGATGACTGAGCTGGAGCG
AGTGAAGAGGAGCGTTGGAAAGGCGCTGCTGGAGGGGGGGATTGACACAC
CTGAGGTCCTACGGTTACTCCAGGGGCTGGTGGCGACCGGCCACATGTAT
ATGCGAGAAGGGAGGGAGGGAGGGAGTGAAGCAGGATGCGTGGAGGAGGT
ACTGAGGAATGTGGCAGGGTACGTGATCTATATTTTGAGACTATTTGGTG
TGCAGAGCATTGATGATGCTATGCAGTCCTTCTCTTCGTCGTCCCCTCTG
TCATCTTCGTCCATGGCCACTACAGCTGCCACCACAGAGGCTCTTTCTAG
GGCTGTGGTGGACTTCCGGGCTTGTGTGCGCGCTGCTGCCTTGGAGGACC
GGGAAGAACATGGGTGTTTTAGAGAAACTGGCGCGACGGGAGGGGAGAAG
CCGAAGAGTAGCAGTAGTACAGAGCTTGCGCGTAGGTTGTTGCGTTTGTG
CGATGATTTCCGAGATGGTGAGTTGGCTCGCTTGGGTCTGCAGGTGAAAG
ACCTTGGGGTGGGAAAATGTCACTGGGCTCTGGGAGCCCCTCCTCCTCCT
CCTCCCTCTCCTTCTCCACCTCCTTCCAATCTTCCTCCTTCTCCACTTGC
CGCTGCTGCTGCTGCTTCGGCGTCTGCTACTGCCTCTATGGCTGCGCCAC
GTGTCGGCAGGCAGCACAAGAGGCCTAGAGCTAGTGTTGCCCTTTCGGAG
CTTTTCAAGCAGGGCCCATATGAAGGCAAGTTCACATCGTTTGATGAGTT
GGAGATTCCCACAGCAGACGCAAAAGGGCGTCCTCTCAGCAAGAATTTGC
GCGCGAAACTCGAGAAGCAGCATGCGCGGCATGTGGCTCTCCTTGCGGAG
GTTAAGCAGAAGGATGACGGGAATGGCGGTGGAAAAGGAAGAGATTGA

protein sequence of NO19G01710.1

>NO19G01710.1-protein ID=NO19G01710.1-protein|Name=NO19G01710.1|organism=Nannochloropsis oceanica|type=polypeptide|length=768bp
MWGKQRVGFASRRLLLGVRGGCHAQGSSGWVIAYRRHGTSISSSVSSSLT
RLLLDREAASTPNQGVAWKWYACGPTVYDSAHLGHARTYVCQDIIRRVLT
NYFGQDVMFAMGVTDVDDKILRRAAEIKEDPWALARRYEAEFWRDMRALN
VLEPTAVVRVTEHIDAIIAYVQRIQKNGFAYETSSGVYFDVAAFVKKGFT
YRKLRQIEGVQGAGEEIPASAAGGGVRGGEGAVVGREEKRGRRDFALWKR
SKAGEEEDMCWDSPWGHGRPGWHIECSAMTHHLLRDRLEIHSGGIDLCFP
HHTNEIAQCEAFGYKAEEREGTVEEDGKLGKGCCPSSYAAAPTTAGEEWV
KAWLHTGHLYIQGLKMSKSLKNFITVQECLKRHHADDFRIFCLQRRYGAN
VNYSESAMREAQNLRRQFCNFVSLAISTQHGSSSSSSSSSSSSSSSSSIR
SKSKRWGPKEVAVMTELERVKRSVGKALLEGGIDTPEVLRLLQGLVATGH
MYMREGREGGSEAGCVEEVLRNVAGYVIYILRLFGVQSIDDAMQSFSSSS
PLSSSSMATTAATTEALSRAVVDFRACVRAAALEDREEHGCFRETGATGG
EKPKSSSSTELARRLLRLCDDFRDGELARLGLQVKDLGVGKCHWALGAPP
PPPPSPSPPPSNLPPSPLAAAAAASASATASMAAPRVGRQHKRPRASVAL
SELFKQGPYEGKFTSFDELEIPTADAKGRPLSKNLRAKLEKQHARHVALL
AEVKQKDDGNGGGKGRD*

protein sequence of NO19G01710.2

>NO19G01710.2-protein ID=NO19G01710.2-protein|Name=NO19G01710.2|organism=Nannochloropsis oceanica|type=polypeptide|length=808bp
MWGKQRVGFASRRLLLGVRGGCHAQGSSGWVIAYRRHGTSISSSVSSSLT
RLLLDREAASTPNQGVAWKWYACGPTVYDSAHLGHARTYVCQDIIRRVLT
NYFGQDVMFAMGVTDVDDKILRRAAEIKEDPWALARRYEAEFWRDMRALN
VLEPTAVVRVTEHIDAIIAYVQRIQKNGFAYETSSGVYFDVAAFVKKGFT
YRKLRQIEGVQGAGEEIPASAAGGGVRGGEGAVVGREEKRGRRDFALWKR
SKAGEEEDMCWDSPWGHGRPGWHIECSAMTHHLLRDRLEIHSGGIDLCFP
HHTNEIAQCEAFGYKAEEREGTVEEDGKLGKGCCPSSYAAAPTTAGEEWV
KAWLHTGHLYIQGLKMSKSLKNFITVQECLKRHHADDFRIFCLQRRYGAN
VNYRCVGGHSRMRKRDRGIIGEPDPTTRTRTYTFLVLALPESHSESAMRE
AQNLRRQFCNFVSLAISTQHGSSSSSSSSSSSSSSSSSIRSKSKRWGPKE
VAVMTELERVKRSVGKALLEGGIDTPEVLRLLQGLVATGHMYMREGREGG
SEAGCVEEVLRNVAGYVIYILRLFGVQSIDDAMQSFSSSSPLSSSSMATT
AATTEALSRAVVDFRACVRAAALEDREEHGCFRETGATGGEKPKSSSSTE
LARRLLRLCDDFRDGELARLGLQVKDLGVGKCHWALGAPPPPPPSPSPPP
SNLPPSPLAAAAAASASATASMAAPRVGRQHKRPRASVALSELFKQGPYE
GKFTSFDELEIPTADAKGRPLSKNLRAKLEKQHARHVALLAEVKQKDDGN
GGGKGRD*

protein sequence of NO19G01710.3

>NO19G01710.3-protein ID=NO19G01710.3-protein|Name=NO19G01710.3|organism=Nannochloropsis oceanica|type=polypeptide|length=798bp
MWGKQRVGFASRRLLLGVRGGCHAQGSSGWVIAYRRHGTSISSSVSSSLT
RLLLDREAASTPNQGVAWKWYACGPTVYDSAHLGHARTYVCQDIIRRVLT
NYFGQDVMFAMGVTDVDDKILRRAAEMYASFSFPTPCQVVLPLRLPLTIP
PKPHKRSKEDPWALARRYEAEFWRDMRALNVLEPTAVVRVTEHIDAIIAY
VQRIQKNGFAYETSSGVYFDVAAFVKKGFTYRKLRQIEGVQGAGEEIPAS
AAGGGVRGGEGAVVGREEKRGRRDFALWKRSKAGEEEDMCWDSPWGHGRP
GWHIECSAMTHHLLRDRLEIHSGGIDLCFPHHTNEIAQCEAFGYKAEERE
GTVEEDGKLGKGCCPSSYAAAPTTAGEEWVKAWLHTGHLYIQGLKMSKSL
KNFITVQECLKRHHADDFRIFCLQRRYGANVNYSESAMREAQNLRRQFCN
FVSLAISTQHGSSSSSSSSSSSSSSSSSIRSKSKRWGPKEVAVMTELERV
KRSVGKALLEGGIDTPEVLRLLQGLVATGHMYMREGREGGSEAGCVEEVL
RNVAGYVIYILRLFGVQSIDDAMQSFSSSSPLSSSSMATTAATTEALSRA
VVDFRACVRAAALEDREEHGCFRETGATGGEKPKSSSSTELARRLLRLCD
DFRDGELARLGLQVKDLGVGKCHWALGAPPPPPPSPSPPPSNLPPSPLAA
AAAASASATASMAAPRVGRQHKRPRASVALSELFKQGPYEGKFTSFDELE
IPTADAKGRPLSKNLRAKLEKQHARHVALLAEVKQKDDGNGGGKGRD*

Synonyms

Publications