NO19G01590, NO19G01590 (gene) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO19G01590
Unique Name	NO19G01590
Type	gene
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	2543
Alignment location	chr19:477338..479880 -

Link to JBrowse

Properties


Property Name	Value
Description	Developmentally regulated gtp binding protein 1

Mutants

Expression

Analysis:

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr19	genome	chr19:477338..479880 -

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
GSE178672	2023-12-15
PRJNA933693	2023-10-26
PRJNA943449	2023-07-19
PXD016054	2021-01-14
PXD016699	2021-01-08
GSE149904	2020-10-10
NoIMET1_WT_HS	2020-09-29
GSE139615	2020-03-11
PRJNA241382	2020-03-11
BLASTP analysis of N. oceanica IMET1 genes	2019-07-11
InterPro analysis for N. oceanica IMET1 genes	2019-07-11
GO annotation for IMET1v2 genes	2019-07-10
PXD008721	2019-04-30
PRJNA182180	2019-04-25
Gene prediction for N. oceanica IMET1	2017-10-24

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR012676	TGS-like
IPR004095	TGS
IPR027417	P-loop_NTPase
IPR031167	G_OBG
IPR031662	GTP-binding_2
IPR006073	GTP_binding_domain

Vocabulary: **Molecular Function**
Term	Definition
GO:0005525	GTP binding
GO:0000166	nucleotide binding

Homology

[Close]

BLAST of NO19G01590 vs. NCBI_GenBank
Match: EWM23702.1 (developmentally regulated gtp binding protein 1 [Nannochloropsis gaditana])

HSP 1 Score: 597.0 bits (1538), Expect = 3.900e-167
Identity = 299/310 (96.45%), Postives = 307/310 (99.03%), Query Frame = 0

Query:    1 MSTIQKIAELEAEYAKTQKNKATNYHLGLIKAKLAKLRRELIEPTGGGXXXXGDGFDVAKSGDTRVGLVGFPSVGKSTLLTKLTGTFSEAASYEFTTLTAIPGTLHYRGARIQIVDLPGIIEGAKDGKGRGRQVISAARTCNIILVVLDVAKPATHKILIERELDGFGIRLNQEPPRIMFRKKDKGGINYQAFVPQTSLDAEAVTAICREYKIHNADVHLRCDATVDQIIDVVEGNRKYMPAVYVLNKIDQISVEELDIISRLPHCVPISASHGWNLDELIDQVWDECKMIRIYTKPKGQIPDYTAPVIL 311
            MST+QKIAELEAEYAKTQKNKATNYHLGLIKAKLAKLRRELIEP+GGGXXXX +GFDVAKSGDTRVGLVGFPSVGKSTLLTKLTGTFSEAASYEFTTLTAIPGTLHYRGARIQ+VDLPGIIEGAKDGKGRGRQVISAARTCNIILVVLDVAKPATHKILIERELDGFGIRLNQEPPRIMFRKKDKGGIN+QAFVPQT+LDAEAVTAICREYKIHNADVHLRCDATVDQIIDVVEGNRKYMPAVYVLNKIDQIS+EELDIISRLPHCVPISA HGWNLDELID+VWDECKMIRIYTKPKGQIPDYTAPV L
Sbjct:    1 MSTLQKIAELEAEYAKTQKNKATNYHLGLIKAKLAKLRRELIEPSGGGXXXXXEGFDVAKSGDTRVGLVGFPSVGKSTLLTKLTGTFSEAASYEFTTLTAIPGTLHYRGARIQVVDLPGIIEGAKDGKGRGRQVISAARTCNIILVVLDVAKPATHKILIERELDGFGIRLNQEPPRIMFRKKDKGGINFQAFVPQTTLDAEAVTAICREYKIHNADVHLRCDATVDQIIDVVEGNRKYMPAVYVLNKIDQISIEELDIISRLPHCVPISAQHGWNLDELIDKVWDECKMIRIYTKPKGQIPDYTAPVSL 310

[Close]

BLAST of NO19G01590 vs. NCBI_GenBank
Match: CCI48212.1 (unnamed protein product [Albugo candida])

HSP 1 Score: 557.0 bits (1434), Expect = 4.400e-155
Identity = 265/366 (72.40%), Postives = 310/366 (84.70%), Query Frame = 0

Query:    2 STIQKIAELEAEYAKTQKNKATNYHLGLIKAKLAKLRRELIEPTGGGXXXXGDGFDVAKSGDTRVGLVGFPSVGKSTLLTKLTGTFSEAASYEFTTLTAIPGTLHYRGARIQIVDLPGIIEGAKDGKGRGRQVISAARTCNIILVVLDVAKPATHKILIERELDGFGIRLNQEPPRIMFRKKDKGGINYQAFVPQTSLDAEAVTAICREYKIHNADVHLRCDATVDQIIDVVEGNRKYMPAVYVLNKIDQISVEELDIISRLPHCVPISASHGWNLDELIDQVWDECKMIRIYTKPKGQIPDYTAPVILHSHHPSVEDFCNRIHRTLISSFKYAWVWGSSVKHQPQRVGKDHILADEDVVQIVKKS 368
            S +QKIAELE EYA+TQKNKAT  HL LIKAK+AKLRRE++E         G+GFDV KSGDTRVGLVGFPSVGKSTLLTKLTGTFSEAASYEFTTLTAIPGTLHYRGARIQ++DLPGIIEGAKDGKGRGRQVI  ARTCN+IL+VLD  KPATHK LIE EL+GFGIRLN++PP ++ ++K+KGG+N+Q   PQ+ LD E V  I  EYKIHNADV LR D +VDQ+ID +EGNR Y+P +YVLNKIDQ+++EEL II +LPH V ISA HGWNLDEL+++VW+ C MIRIYTKP+GQ+PDY APVILHS +P+VE FC RIH+ L+   KYAWVWG SVKHQPQ+VGK+H+L DED+VQIVKK+
Sbjct:    3 SAMQKIAELETEYARTQKNKATMKHLCLIKAKIAKLRREIVEGGSKSGGGTGEGFDVNKSGDTRVGLVGFPSVGKSTLLTKLTGTFSEAASYEFTTLTAIPGTLHYRGARIQVLDLPGIIEGAKDGKGRGRQVIGTARTCNLILIVLDAMKPATHKKLIEHELEGFGIRLNKKPPNMVLKRKEKGGVNFQTTCPQSELDGETVYQILHEYKIHNADVVLREDVSVDQLIDSIEGNRMYIPCLYVLNKIDQLTIEELTIIDQLPHNVVISAHHGWNLDELLEKVWEYCNMIRIYTKPRGQVPDYNAPVILHSENPTVEHFCLRIHKNLLRQLKYAWVWGISVKHQPQKVGKEHLLQDEDIVQIVKKN 368

[Close]

BLAST of NO19G01590 vs. NCBI_GenBank
Match: XP_012893769.1 (uncharacterized protein [Blastocystis hominis] >XP_012898313.1 uncharacterized protein [Blastocystis hominis] >CBK19721.2 unnamed protein product [Blastocystis hominis] >CBK24265.2 unnamed protein product [Blastocystis hominis])

HSP 1 Score: 556.6 bits (1433), Expect = 5.800e-155
Identity = 256/366 (69.95%), Postives = 309/366 (84.43%), Query Frame = 0

Query:    1 MSTIQKIAELEAEYAKTQKNKATNYHLGLIKAKLAKLRRELIEPTGGGXXXXGDGFDVAKSGDTRVGLVGFPSVGKSTLLTKLTGTFSEAASYEFTTLTAIPGTLHYRGARIQIVDLPGIIEGAKDGKGRGRQVISAARTCNIILVVLDVAKPATHKILIERELDGFGIRLNQEPPRIMFRKKDKGGINYQAFVPQTSLDAEAVTAICREYKIHNADVHLRCDATVDQIIDVVEGNRKYMPAVYVLNKIDQISVEELDIISRLPHCVPISASHGWNLDELIDQVWDECKMIRIYTKPKGQIPDYTAPVILHSHHPSVEDFCNRIHRTLISSFKYAWVWGSSVKHQPQRVGKDHILADEDVVQIVKK 367
            MS +Q+IAE+E E A+TQKNKAT  H+GL+KAKLAKLRRE++ P        G+GFDV KSGDTRVGL+GFPSVGKSTLLTKLTGTFSE A+YEFTTLT IPG +HY+GA+IQ++DLPGIIEGAKDGKGRGRQ+I  ARTCN+IL+VLD  KP THK +IE+EL+GFGIRLN++PP I F+ KDKGG+N Q       LDA+ V++I  EYKIHNAD+ +RCDATVD +IDV+EGNR YMP +YVLNKIDQIS+EELDI++ L HCVP+ A   WNLDEL++++W+ CKMIRIYTKPKGQIPDY  PVILH+  P+V DFCNR+H+++++ F+YAWVWGSSVKHQPQRVG DH+L DEDVVQIVKK
Sbjct:    1 MSLVQQIAEIEEEMARTQKNKATEKHIGLLKAKLAKLRREILTPKSS--KGGGEGFDVTKSGDTRVGLIGFPSVGKSTLLTKLTGTFSEVAAYEFTTLTCIPGVIHYKGAKIQLLDLPGIIEGAKDGKGRGRQIIGTARTCNMILIVLDAMKPVTHKRIIEKELEGFGIRLNKQPPNIYFKIKDKGGVNLQIMSKDCELDADVVSSILHEYKIHNADITIRCDATVDDLIDVIEGNRVYMPCLYVLNKIDQISIEELDILAELEHCVPVCAGREWNLDELLERIWEYCKMIRIYTKPKGQIPDYEEPVILHAEAPTVRDFCNRLHKSIVNQFQYAWVWGSSVKHQPQRVGLDHVLMDEDVVQIVKK 364

[Close]

BLAST of NO19G01590 vs. NCBI_GenBank
Match: CCI48214.1 (unnamed protein product [Albugo candida])

HSP 1 Score: 555.8 bits (1431), Expect = 9.800e-155
Identity = 264/364 (72.53%), Postives = 309/364 (84.89%), Query Frame = 0

Query:    4 IQKIAELEAEYAKTQKNKATNYHLGLIKAKLAKLRRELIEPTGGGXXXXGDGFDVAKSGDTRVGLVGFPSVGKSTLLTKLTGTFSEAASYEFTTLTAIPGTLHYRGARIQIVDLPGIIEGAKDGKGRGRQVISAARTCNIILVVLDVAKPATHKILIERELDGFGIRLNQEPPRIMFRKKDKGGINYQAFVPQTSLDAEAVTAICREYKIHNADVHLRCDATVDQIIDVVEGNRKYMPAVYVLNKIDQISVEELDIISRLPHCVPISASHGWNLDELIDQVWDECKMIRIYTKPKGQIPDYTAPVILHSHHPSVEDFCNRIHRTLISSFKYAWVWGSSVKHQPQRVGKDHILADEDVVQIVKKS 368
            +QKIAELE EYA+TQKNKAT  HL LIKAK+AKLRRE++E         G+GFDV KSGDTRVGLVGFPSVGKSTLLTKLTGTFSEAASYEFTTLTAIPGTLHYRGARIQ++DLPGIIEGAKDGKGRGRQVI  ARTCN+IL+VLD  KPATHK LIE EL+GFGIRLN++PP ++ ++K+KGG+N+Q   PQ+ LD E V  I  EYKIHNADV LR D +VDQ+ID +EGNR Y+P +YVLNKIDQ+++EEL II +LPH V ISA HGWNLDEL+++VW+ C MIRIYTKP+GQ+PDY APVILHS +P+VE FC RIH+ L+   KYAWVWG SVKHQPQ+VGK+H+L DED+VQIVKK+
Sbjct:    1 MQKIAELETEYARTQKNKATMKHLCLIKAKIAKLRREIVEGGSKSGGGTGEGFDVNKSGDTRVGLVGFPSVGKSTLLTKLTGTFSEAASYEFTTLTAIPGTLHYRGARIQVLDLPGIIEGAKDGKGRGRQVIGTARTCNLILIVLDAMKPATHKKLIEHELEGFGIRLNKKPPNMVLKRKEKGGVNFQTTCPQSELDGETVYQILHEYKIHNADVVLREDVSVDQLIDSIEGNRMYIPCLYVLNKIDQLTIEELTIIDQLPHNVVISAHHGWNLDELLEKVWEYCNMIRIYTKPRGQVPDYNAPVILHSENPTVEHFCLRIHKNLLRQLKYAWVWGISVKHQPQKVGKEHLLQDEDIVQIVKKN 364

[Close]

BLAST of NO19G01590 vs. NCBI_GenBank
Match: CCA26436.1 (developmentallyregulated GTPbinding protein 1 putat [Albugo laibachii Nc14])

HSP 1 Score: 554.7 bits (1428), Expect = 2.200e-154
Identity = 265/366 (72.40%), Postives = 308/366 (84.15%), Query Frame = 0

Query:    2 STIQKIAELEAEYAKTQKNKATNYHLGLIKAKLAKLRRELIEPTGGGXXXXGDGFDVAKSGDTRVGLVGFPSVGKSTLLTKLTGTFSEAASYEFTTLTAIPGTLHYRGARIQIVDLPGIIEGAKDGKGRGRQVISAARTCNIILVVLDVAKPATHKILIERELDGFGIRLNQEPPRIMFRKKDKGGINYQAFVPQTSLDAEAVTAICREYKIHNADVHLRCDATVDQIIDVVEGNRKYMPAVYVLNKIDQISVEELDIISRLPHCVPISASHGWNLDELIDQVWDECKMIRIYTKPKGQIPDYTAPVILHSHHPSVEDFCNRIHRTLISSFKYAWVWGSSVKHQPQRVGKDHILADEDVVQIVKKS 368
            S +QKIAELEAEYA+TQKNKAT  HL L+KAK+A+LRRE++E         G+GFDV KSGDTRVGLVGFPSVGKSTLLTKLTGTFSEAASYEFTTLTAIPGTLHYRGARIQI+DLPGIIEGAKDGKGRGRQVI  ARTCN+IL+VLD  KPATHK LIE EL+G GIRLN+ PP ++ ++K+KGG+N+Q   PQ+ LD E V  I  EYKIHNADV LR D TVDQ+ID +EGNR Y+P +YVLNKIDQ+++EEL II +LPH V ISA HGWNLDEL++ VW+ C MIRIYTKP+GQ+PDY APVILHS +P+VE FC RIH+ L+   KYAWVWG SVKHQPQ+VGK+H+L DED+VQIVKK+
Sbjct:    3 SAMQKIAELEAEYARTQKNKATMKHLCLLKAKIARLRREIVEGGSKSGGGTGEGFDVNKSGDTRVGLVGFPSVGKSTLLTKLTGTFSEAASYEFTTLTAIPGTLHYRGARIQILDLPGIIEGAKDGKGRGRQVIGTARTCNLILIVLDAMKPATHKKLIEHELEGLGIRLNKNPPNMVLKRKEKGGVNFQTTCPQSELDGETVYQILHEYKIHNADVVLREDVTVDQLIDNIEGNRVYIPCLYVLNKIDQLTIEELTIIDQLPHNVVISAHHGWNLDELLENVWEYCNMIRIYTKPRGQVPDYNAPVILHSENPTVEHFCLRIHKNLLRQLKYAWVWGISVKHQPQKVGKEHLLQDEDIVQIVKKN 368

[Close]

BLAST of NO19G01590 vs. NCBI_GenBank
Match: GAY05031.1 (developmentally-regulated GTP-binding protein 1 [Pythium insidiosum])

HSP 1 Score: 552.7 bits (1423), Expect = 8.300e-154
Identity = 263/369 (71.27%), Postives = 317/369 (85.91%), Query Frame = 0

Query:    1 MSTIQKIAELEAEYAKTQKNKATNYHLGLIKAKLAKLRRELIE---PTGGGXXXXGDGFDVAKSGDTRVGLVGFPSVGKSTLLTKLTGTFSEAASYEFTTLTAIPGTLHYRGARIQIVDLPGIIEGAKDGKGRGRQVISAARTCNIILVVLDVAKPATHKILIERELDGFGIRLNQEPPRIMFRKKDKGGINYQAFVPQTSLDAEAVTAICREYKIHNADVHLRCDATVDQIIDVVEGNRKYMPAVYVLNKIDQISVEELDIISRLPHCVPISASHGWNLDELIDQVWDECKMIRIYTKPKGQIPDYTAPVILHSHHPSVEDFCNRIHRTLISSFKYAWVWGSSVKHQPQRVGKDHILADEDVVQIVKK 367
            MS +QKI ELEAEYA+TQKNKAT  HL L+KAK+AKLRRE+ +    +GGG    G+GFDV K+GDTRVGLVGFPSVGKSTLLTKLTGTFSE+ASYEFTTLTAIPGTL+YRGARIQI+DLPGIIEGAKDGKGRGRQV   ARTCN+IL+VLD  KPATHK LIE EL+GFGIRLN+ PP ++ ++K++GG+NYQ+ VPQ+ LD+E V  +  EY+IHNAD+ LR D TVDQ+IDV+EGNR Y+P +YVLNKIDQ+++EEL II ++PH V ISA H WN DEL++ +WD CKM+RIYTKP+GQ+PDY+APVILH+  P+VEDFC RIH++L+  FKYAWVWG+SVKHQPQ+VGKDH+L DED+VQIVKK
Sbjct:    1 MSALQKIQELEAEYARTQKNKATMKHLCLLKAKIAKLRREITDGGSKSGGG--GAGEGFDVNKAGDTRVGLVGFPSVGKSTLLTKLTGTFSESASYEFTTLTAIPGTLNYRGARIQILDLPGIIEGAKDGKGRGRQVXGTARTCNVILIVLDAMKPATHKKLIEYELEGFGIRLNKSPPNVVLKRKERGGVNYQSTVPQSELDSETVHQLLHEYRIHNADITLREDITVDQLIDVIEGNRVYIPCLYVLNKIDQLTIEELRIIDQIPHNVLISAHHQWNFDELLEGIWDYCKMMRIYTKPRGQMPDYSAPVILHADRPTVEDFCLRIHKSLLRQFKYAWVWGTSVKHQPQKVGKDHVLNDEDIVQIVKK 367

[Close]

BLAST of NO19G01590 vs. NCBI_GenBank
Match: OAO13219.1 (hypothetical protein AV274_5112 [Blastocystis sp. ATCC 50177/Nand II])

HSP 1 Score: 550.8 bits (1418), Expect = 3.200e-153
Identity = 255/368 (69.29%), Postives = 310/368 (84.24%), Query Frame = 0

Query:    1 MSTIQKIAELEAEYAKTQKNKATNYHLGLIKAKLAKLRRELIEP--TGGGXXXXGDGFDVAKSGDTRVGLVGFPSVGKSTLLTKLTGTFSEAASYEFTTLTAIPGTLHYRGARIQIVDLPGIIEGAKDGKGRGRQVISAARTCNIILVVLDVAKPATHKILIERELDGFGIRLNQEPPRIMFRKKDKGGINYQAFVPQTSLDAEAVTAICREYKIHNADVHLRCDATVDQIIDVVEGNRKYMPAVYVLNKIDQISVEELDIISRLPHCVPISASHGWNLDELIDQVWDECKMIRIYTKPKGQIPDYTAPVILHSHHPSVEDFCNRIHRTLISSFKYAWVWGSSVKHQPQRVGKDHILADEDVVQIVKK 367
            MS +Q+IAE+E E A+TQKNKAT  H+GL+KAKLAKLRRE++ P  + GG    G+GFDV KSGDTRVGL+GFPSVGKSTLLTKLTGTFSE A+YEFTTLT IPG +HY+GA+IQ++DLPGIIEGAKDGKGRGRQ+I  ARTC++IL+VLD  KP THK LIE+EL+GFGIRLN++PP I F+ KDKGG+N Q       LD++ ++++ +EYKIHNAD+ +RCDATVD +IDV+EGNR YMP +YVLNKIDQIS+EELDI++ L HCVP+ A   WNLDEL++++W+ CKMIRIYTKPKGQIPDY  PVILH   P+V DFCNR+H+ ++  F YAWVWGSSVKHQPQRVG DH+LADEDVVQIVK+
Sbjct:   20 MSLVQQIAEIEEEMARTQKNKATERHIGLLKAKLAKLRREIMTPKTSKGG----GEGFDVTKSGDTRVGLIGFPSVGKSTLLTKLTGTFSEVAAYEFTTLTCIPGVIHYKGAKIQLLDLPGIIEGAKDGKGRGRQIIGTARTCSMILIVLDAMKPVTHKRLIEKELEGFGIRLNKQPPNIYFKLKDKGGLNIQIMSKNCELDSDVISSVLQEYKIHNADITIRCDATVDDLIDVIEGNRVYMPCLYVLNKIDQISIEELDILAELEHCVPVCAGREWNLDELLEKMWEYCKMIRIYTKPKGQIPDYEEPVILHCEKPTVRDFCNRLHKAIVDQFLYAWVWGSSVKHQPQRVGLDHVLADEDVVQIVKR 383

[Close]

BLAST of NO19G01590 vs. NCBI_GenBank
Match: OAO13857.1 (hypothetical protein AV274_4532 [Blastocystis sp. ATCC 50177/Nand II])

HSP 1 Score: 550.8 bits (1418), Expect = 3.200e-153
Identity = 255/368 (69.29%), Postives = 310/368 (84.24%), Query Frame = 0

Query:    1 MSTIQKIAELEAEYAKTQKNKATNYHLGLIKAKLAKLRRELIEP--TGGGXXXXGDGFDVAKSGDTRVGLVGFPSVGKSTLLTKLTGTFSEAASYEFTTLTAIPGTLHYRGARIQIVDLPGIIEGAKDGKGRGRQVISAARTCNIILVVLDVAKPATHKILIERELDGFGIRLNQEPPRIMFRKKDKGGINYQAFVPQTSLDAEAVTAICREYKIHNADVHLRCDATVDQIIDVVEGNRKYMPAVYVLNKIDQISVEELDIISRLPHCVPISASHGWNLDELIDQVWDECKMIRIYTKPKGQIPDYTAPVILHSHHPSVEDFCNRIHRTLISSFKYAWVWGSSVKHQPQRVGKDHILADEDVVQIVKK 367
            MS +Q+IAE+E E A+TQKNKAT  H+GL+KAKLAKLRRE++ P  + GG    G+GFDV KSGDTRVGL+GFPSVGKSTLLTKLTGTFSE A+YEFTTLT IPG +HY+GA+IQ++DLPGIIEGAKDGKGRGRQ+I  ARTC++IL+VLD  KP THK LIE+EL+GFGIRLN++PP I F+ KDKGG+N Q       LD++ ++++ +EYKIHNAD+ +RCDATVD +IDV+EGNR YMP +YVLNKIDQIS+EELDI++ L HCVP+ A   WNLDEL++++W+ CKMIRIYTKPKGQIPDY  PVILH   P+V DFCNR+H+ ++  F YAWVWGSSVKHQPQRVG DH+LADEDVVQIVK+
Sbjct:   20 MSLVQQIAEIEEEMARTQKNKATERHIGLLKAKLAKLRREIMTPKTSKGG----GEGFDVTKSGDTRVGLIGFPSVGKSTLLTKLTGTFSEVAAYEFTTLTCIPGVIHYKGAKIQLLDLPGIIEGAKDGKGRGRQIIGTARTCSMILIVLDAMKPVTHKRLIEKELEGFGIRLNKQPPNIYFKLKDKGGLNIQIMSKNCELDSDVISSVLQEYKIHNADITIRCDATVDDLIDVIEGNRVYMPCLYVLNKIDQISIEELDILAELEHCVPVCAGREWNLDELLEKMWEYCKMIRIYTKPKGQIPDYEEPVILHCEKPTVRDFCNRLHKAIVDQFLYAWVWGSSVKHQPQRVGLDHVLADEDVVQIVKR 383

[Close]

BLAST of NO19G01590 vs. NCBI_GenBank
Match: XP_002896714.1 (developmentally-regulated GTP-binding protein 1 [Phytophthora infestans T30-4] >EEY66827.1 developmentally-regulated GTP-binding protein 1 [Phytophthora infestans T30-4])

HSP 1 Score: 549.7 bits (1415), Expect = 7.100e-153
Identity = 264/368 (71.74%), Postives = 313/368 (85.05%), Query Frame = 0

Query:    2 STIQKIAELEAEYAKTQKNKATNYHLGLIKAKLAKLRRELIE---PTGGGXXXXGDGFDVAKSGDTRVGLVGFPSVGKSTLLTKLTGTFSEAASYEFTTLTAIPGTLHYRGARIQIVDLPGIIEGAKDGKGRGRQVISAARTCNIILVVLDVAKPATHKILIERELDGFGIRLNQEPPRIMFRKKDKGGINYQAFVPQTSLDAEAVTAICREYKIHNADVHLRCDATVDQIIDVVEGNRKYMPAVYVLNKIDQISVEELDIISRLPHCVPISASHGWNLDELIDQVWDECKMIRIYTKPKGQIPDYTAPVILHSHHPSVEDFCNRIHRTLISSFKYAWVWGSSVKHQPQRVGKDHILADEDVVQIVKK 367
            S + KIAELEAEYA+TQKNKAT  HL L+KAK+AKLRRE+ +    +GGG    G+GFDV K+GDTRVGLVGFPSVGKSTLLTKLTGTFSE+ASYEFTTLTAIPGTL+YRGARIQI+DLPGIIEGAKDGKGRGRQVI  ARTCN+IL+VLD  KPATHK LIE EL+GFGIRLN++P  ++FR+K++GG+N+Q  VPQT LDA+ V  I  EYKIHNADV LR D TVD+ ID +EGNR Y+P +YVLNKIDQ+++EEL II ++PH V ISA HGWNLDEL++ +WD C MIRIYTKP+G++PDY APVILH  +P+VE+FC RIH++L+  FKYAWVWGSS KHQPQ+VGK+H L DED+VQIVKK
Sbjct:    3 SAMAKIAELEAEYARTQKNKATMKHLCLLKAKIAKLRREVTDAGSKSGGG--GAGEGFDVNKAGDTRVGLVGFPSVGKSTLLTKLTGTFSESASYEFTTLTAIPGTLNYRGARIQILDLPGIIEGAKDGKGRGRQVIGTARTCNVILIVLDAMKPATHKKLIEFELEGFGIRLNKKPANMVFRRKERGGVNFQTTVPQTELDADTVYQILHEYKIHNADVTLRADVTVDEFIDQIEGNRVYIPCLYVLNKIDQLTIEELTIIDQIPHNVVISAHHGWNLDELLETIWDYCHMIRIYTKPRGKLPDYNAPVILHEENPTVENFCQRIHKSLLKDFKYAWVWGSSCKHQPQKVGKEHQLQDEDIVQIVKK 368

[Close]

BLAST of NO19G01590 vs. NCBI_GenBank
Match: POM57296.1 (Developmentally-regulated GTP-binding protein 1 [Phytophthora palmivora var. palmivora])

HSP 1 Score: 548.9 bits (1413), Expect = 1.200e-152
Identity = 263/368 (71.47%), Postives = 312/368 (84.78%), Query Frame = 0

Query:    2 STIQKIAELEAEYAKTQKNKATNYHLGLIKAKLAKLRRELIE---PTGGGXXXXGDGFDVAKSGDTRVGLVGFPSVGKSTLLTKLTGTFSEAASYEFTTLTAIPGTLHYRGARIQIVDLPGIIEGAKDGKGRGRQVISAARTCNIILVVLDVAKPATHKILIERELDGFGIRLNQEPPRIMFRKKDKGGINYQAFVPQTSLDAEAVTAICREYKIHNADVHLRCDATVDQIIDVVEGNRKYMPAVYVLNKIDQISVEELDIISRLPHCVPISASHGWNLDELIDQVWDECKMIRIYTKPKGQIPDYTAPVILHSHHPSVEDFCNRIHRTLISSFKYAWVWGSSVKHQPQRVGKDHILADEDVVQIVKK 367
            S + KIAELEAEYA+TQKNKAT  HL L+KAK+AKLRRE+ +    +GGG    G+GFDV K+GDTRVGLVGFPSVGKSTLLTKLTGTFSE+ASYEFTTLTAIPGTL+YRGARIQI+DLPGIIEGAKDGKGRGRQVI  ARTCN+IL+VLD  KPATHK LIE EL+GFGIRLN++P  ++FR+K++GGIN+Q  VPQT LDA+ V  I  EYKIHNADV LR D TVD+ ID +EGNR Y+P +YVLNKIDQ+++EEL II ++PH V ISA HGWN DEL++ +WD C MIRIYTKP+G++PDY APVILH   P+VE+FC RIH++L+  FKYAWVWG+S KHQPQ+VGK+H+L DED+VQIVKK
Sbjct:    3 SAMAKIAELEAEYARTQKNKATMKHLCLLKAKIAKLRREVTDAGSKSGGG--GTGEGFDVNKAGDTRVGLVGFPSVGKSTLLTKLTGTFSESASYEFTTLTAIPGTLNYRGARIQILDLPGIIEGAKDGKGRGRQVIGTARTCNVILIVLDAMKPATHKKLIEFELEGFGIRLNKKPANMVFRRKERGGINFQTTVPQTELDADTVYQILHEYKIHNADVTLRADVTVDEFIDQIEGNRVYIPCLYVLNKIDQLTIEELTIIDQIPHNVVISAHHGWNFDELLEMIWDYCHMIRIYTKPRGKLPDYNAPVILHEESPTVENFCQRIHKSLLKEFKYAWVWGASCKHQPQKVGKEHLLQDEDIVQIVKK 368

The following BLAST results are available for this feature:

BLAST of NO19G01590 vs. NCBI_GenBank

BLAST of NO19G01590 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20


Match Name	E-value	Identity	Description
EWM23702.1	3.900e-167	96.45	developmentally regulated gtp binding protein 1 [N...	[more]
CCI48212.1	4.400e-155	72.40	unnamed protein product [Albugo candida]	[more]
XP_012893769.1	5.800e-155	69.95	uncharacterized protein [Blastocystis hominis] >XP...	[more]
CCI48214.1	9.800e-155	72.53	unnamed protein product [Albugo candida]	[more]
CCA26436.1	2.200e-154	72.40	developmentallyregulated GTPbinding protein 1 puta...	[more]
GAY05031.1	8.300e-154	71.27	developmentally-regulated GTP-binding protein 1 [P...	[more]
OAO13219.1	3.200e-153	69.29	hypothetical protein AV274_5112 [Blastocystis sp. ...	[more]
OAO13857.1	3.200e-153	69.29	hypothetical protein AV274_4532 [Blastocystis sp. ...	[more]
XP_002896714.1	7.100e-153	71.74	developmentally-regulated GTP-binding protein 1 [P...	[more]
POM57296.1	1.200e-152	71.47	Developmentally-regulated GTP-binding protein 1 [P...	[more]

Pages

Relationships

This gene is member of the following syntenic_region feature(s):


Feature Name	Unique Name	Species	Type
nonsL012	nonsL012	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ncniR034	ncniR034	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ngnoR039	ngnoR039	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region

This gene is orthologous to the following gene feature(s):


Feature Name	Unique Name	Species	Type
NSK004497	NSK004497	Nannochloropsis salina (N. salina CCMP1776)	gene

The following polypeptide feature(s) derives from this gene:


Feature Name	Unique Name	Species	Type
NO19G01590.2	NO19G01590.2-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide
NO19G01590.1	NO19G01590.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following gene feature(s) are orthologous to this gene:


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|599166	gene_7557	Nannochloropsis oceanica (N. oceanica CCMP1779)	gene
Naga_100030g52	gene6794	Nannochloropsis gaditana (N. gaditana B-31)	gene

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
NO19G01590.2	NO19G01590.2	Nannochloropsis oceanica (N. oceanica IMET1)	mRNA
NO19G01590.1	NO19G01590.1	Nannochloropsis oceanica (N. oceanica IMET1)	mRNA

Sequences

The following sequences are available for this feature:

gene sequence
protein sequence
protein sequence

gene sequence

>NO19G01590 ID=NO19G01590|Name=NO19G01590|organism=Nannochloropsis oceanica|type=gene|length=2543bp
CAACAGGGTCCGACCATTGACTCTCAAGCAGACGGGCAAGCCAGCATCAT
AATCTGCTCCTCCACATCGTAGAAGCCAGCTACCACTTCATTAACTGCAG
CACCAGCCCAATCACAACATGTCGACGATCCAAgtaagtttagggagaac
taaatctgtcgtttctagtactttgtttttcacagcgccatgcccgtttc
cttggttttcaccctcgccccatgtagaagggaacctccctccctctttt
tttccccgtagcccccctctgcaacaacttctgcctgccaagcacgaaga
gtttttgttctttctttctgttctttcaagagccttcctgttccagcact
gcttctctccgtatctcccccttgaccatttctcccatcctcacatcccc
tcccgacagAAAATCGCCGAGTTGGAAGCCGAGTACGCCAAGACCCAAAA
GAACAAGGCGACCAACTATCATCTCGGCCTTATCAAAGCCAAGCTTGCCA
AGCTCCGTCGTGAGCTGATTGAACCCACCGGCGGCGGTGGAGGGAAAGGA
GGGGATGGCTTCGACGTGGCCAAGTCAGGCGACACCCGTGTGGGTCTGGT
GGGCTTTCCATCAGTAGGGAAATCGACCCTGTTGACGAAGCTCACGGGCA
CATTTTCCGAGGCGGCCTCTTATGAGTTTACTACTTTGACGGCAATTCCA
GGCACGCTGCATTACCGGGGGGCGAGGATCCAGATTGTGGATCTACCGGG
GATTATCGAGGGAGCGAAGGACGGCAAAGgcaagttcatcttccctcctt
ccctcctcctctccccctctcccctgagtccgcgaaggaagaattcgggc
tttgcctcttgttcatcaaatgatttctctagcgttttcatgcattataa
tcttttttgtgctcccggccggccacgtccaaaatcctctgcttttgctc
acccctccctccctcttgccctccctccctcccttcctcccttgccccat
cctatgatagGCCGTGGTCGTCAAGTCATTTCCGCAGCGCGTACATGCAA
CATTATTCTCGTCGTCCTCGACGTGGCTAAGCCCGCCACCCATAAAATCT
TGATCGAACGTGAGCTGGATGGATTTGGCATTCGCCTGAACCAGGAGCCT
CCGCGCATCATGTTCCGGAAGAAGGACAAGGGCGGAATTAATTATCAAGC
CTTTGTGCCTCAGACGTCTCTCGACGCCGAGGCGGTGACGGCGATTTGCC
GGGAGTACAAGATTCACAATGCGGATGTGCACTTGCGGTGTGACGCCACG
GTGGACCAGATAATTGACGTGGTTGAGGGCAATAGGAAGgtggggaatct
cgggggagggaaagagggagggagggaaagaggaagggaaggaaggaggg
agggaaagagggagggaaggagggatgaaaggattagaagctgagctttt
attttactgctttcctctttcatgaaaaaaaagacttcatcttggtgacc
ttaatcctccctccctctctcccttcctcccttcctcccttcctccctcc
ctccttctcccaccacgtacagTACATGCCCGCCGTGTACGTGCTTAACA
AAATTGACCAAATCTCGGTGGAGGAGCTGGACATCATCAGCCGCCTCCCC
CACTGTGTCCCCATCTCCGCTTCGCATGGATGGAACCTCGATGAGCTCAT
CGACCAAGTCTGGGATGAGTGTAAGATGATCCGGATCTACACCAAGCCCA
AAGGCCAAATCCCTGACTACACCGCACCGgtacgcacctcacctcccccc
ccatccctccttctctcttttctgaacgaatccgtcgcacgttgatgaac
tctgtgacgtacgtctgatggtgcaagtcctttatccatatgctcacccc
ttaccacctttccctttctcctccctcccctcccttctctcccgccagGT
AATTCTCCATTCCCACCATCCCTCCGTCGAGGATTTCTGCAACCGCATCC
ATCGCACATTGATAAGTTCTTTTAAGTATGCCTGGGTTTGGGGCTCGAGC
GTGAAGCACCAACCGCAAAGGGTGGGGAAAGATCATATTCTTGCCGATGA
GGATGTTGTGCAAATCGTGAAAAAGAGTGGATAGAAGGAGAAATAGACGG
AGAGAGACAGAGACAAACAGAAAGAGCCATAGAGAAAGACAGAGAGAACT
AGATACAGAGAGTGAGAGGGGGGAAGACAGGGAGAGGGAGGAGAGAGAGG
CGAGGGAGAGTATGAGAGAGGCGACAATATTTTCGACTACGGAAAAAGAT
GGTCACTCTATTGCCTGAGGACAGCTACAACAGCAGTAGTAGCAGAGGCA
GCAGCAGCAGGAGCCTCCTGCATCATTGAAGCGCTCATGTGCAGGAAGGA
CAAGAGAAAGGAGGGGAAAATCGCAGCGAACGACGAGGCGGGGAAAGGGC
ATAGGGACGAGGGATGAAGAGGGGTGAAGGAATAAGGGATGACGGAAGGG
AAGAGACTTAAGAAAGAAGAAGTAGGACTTGTAATTGTACCCC

protein sequence of NO19G01590.2

>NO19G01590.2-protein ID=NO19G01590.2-protein|Name=NO19G01590.2|organism=Nannochloropsis oceanica|type=polypeptide|length=329bp
MSTIQKIAELEAEYAKTQKNKATNYHLGLIKAKLAKLRRELIEPTGGGGG
KGGDGFDVAKSGDTRVGLVGFPSVGKSTLLTKLTGTFSEAASYEFTTLTA
IPGTLHYRGARIQIVDLPGIIEGAKDGKGRGRQVISAARTCNIILVVLDV
AKPATHKILIERELDGFGIRLNQEPPRIMFRKKDKGGINYQAFVPQTSLD
AEAVTAICREYKIHNADVHLRCDATVDQIIDVVEGNRKYMPAVYVLNKID
QISVEELDIISRLPHCVPISASHGWNLDELIDQVWDECKMIRIYTKPKGQ
IPDYTAPVRTSPPPPSLLLSFLNESVAR*

protein sequence of NO19G01590.1

>NO19G01590.1-protein ID=NO19G01590.1-protein|Name=NO19G01590.1|organism=Nannochloropsis oceanica|type=polypeptide|length=369bp
MSTIQKIAELEAEYAKTQKNKATNYHLGLIKAKLAKLRRELIEPTGGGGG
KGGDGFDVAKSGDTRVGLVGFPSVGKSTLLTKLTGTFSEAASYEFTTLTA
IPGTLHYRGARIQIVDLPGIIEGAKDGKGRGRQVISAARTCNIILVVLDV
AKPATHKILIERELDGFGIRLNQEPPRIMFRKKDKGGINYQAFVPQTSLD
AEAVTAICREYKIHNADVHLRCDATVDQIIDVVEGNRKYMPAVYVLNKID
QISVEELDIISRLPHCVPISASHGWNLDELIDQVWDECKMIRIYTKPKGQ
IPDYTAPVILHSHHPSVEDFCNRIHRTLISSFKYAWVWGSSVKHQPQRVG
KDHILADEDVVQIVKKSG*

Synonyms

Publications