NO19G01540, NO19G01540 (gene) Nannochloropsis oceanica

Overview
NameNO19G01540
Unique NameNO19G01540
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2037
Alignment locationchr19:468348..470384 -

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr19genomechr19:468348..470384 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO19G01540 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL012nonsL012Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR034ncniR034Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR039ngnoR039Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO19G01540.1NO19G01540.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO19G01540.1NO19G01540.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO19G01540 ID=NO19G01540|Name=NO19G01540|organism=Nannochloropsis oceanica|type=gene|length=2037bp
ATGGATCTGGGTCTGTTATCTCCATTCACGTCGGTGGCAAGGAAGAGTGT
AAATAGTAGCAGCAGCAGCAGTAGCAAAAGTAGCATGATGGAGGACGAGA
AGAATGTTCAGATGAGAGGAATAGCAGCAAGAGTACAAGATCGCTGTAGC
ACTTCAAGTTCTATTTTCGTCATGAAATGTAGCGTACTGCCGTGCAGTCG
CAGCAGCAGCAGCAGCAGTAGCAGCAGCAGCTGTAATgtaagggtgcaag
ggccaggagggagggaggtggtcacgttgacagaagcagctctctcttgg
caaaggcgtttttgcggctgtgggggaaggaagtcagaaggtggttcaga
cttggtacggagtatggagagtggttgatggagggaggggaaaaggaggg
ggtggaggaggttgtaatatatttggagccgttgaggaaggagggctgct
ggcaggggacagaagcagcagcagcactagcaccagcggcagcaacagta
gcagcaccagcagcgacgttgggatgtaatgatatgacatgtagtcgttc
cctgttctcttccatctctagtgaagcagcagctgcagtaggaatggatg
gagggggatgggggtgtcgatcttcctttcgttgctacagCTGTGGGTGA
GTAAAGAGAGGCTCGCCTTGAAGCCAAACGTGGTGGTCATGGGTGAATTG
ATGTTGTGCGGGAACATCATCAGCGGGTATTCTCATCGACAGCATCGAGG
GAAGGAGAGAGGAAGAGAGGGAGAGGAAGAGTGTGTGTTGGCGGGCATGC
TACGGGCAGCGAGAGAGGGAGGGGTGGGCTGCTTGATCTTACCCAAGGAC
ATGCAGGAGGATGTCGCGTCTTTCCTGTGTGCCAATGCTGCTGGTGCTGC
TAGTGCTGCTGTTGCTGGTGCTGCTGGAGCTGCTGCTGCTGCTGCTGCTG
CTCCGAAAGCCGATGTCCGTTTTCTCTTTGCTGAGGACATTGTGGACTTG
CTTGGCTTTgtgagcgggtccttctctttctcttcctccatccccccccc
tcctactggggtaatcaggcctccttccatccttcctcgttatcttttcg
ctcctcctcctccccctctcccaagTTATCGCTGCTCGTGGGGAAACGCC
TGAGTTGCACACACGAAGAGAAAGGATGGACGGGAGAGAGGGAAGAAGGG
TGGATTTACGTGGCACCAACCCTTCTACCTGTCGATGACGTGTCTGTTTC
TTTTCGGAGGGTGGAAGTAGCTGTCTTGTTAGGTGGAGGACGAGGGCAGT
TCCTCGTTACAACCACAGGCCTTGCCTCCTCCTCCTCCTCCTCCCTCTCC
TCTTTTACCTTTTCATCCCCTTCTTCTTCAGTAACAGCATCACCCATCCT
CCTCTCCAGCAACAGCATCAACCGCACTAGCAGCAGCGGAAGCAATGGCA
ACATTATCAGTAGTAGGAGACGTAGTAATTGTGGAGGAGGAAAAGGAGAA
GGCGGAGGAGGAGCCGTCTGTGCCGCAATAAACGTCGCGCGCGTCCTGCT
CCTCAAGAACCAACAACAGCTCTGTCAGTTCCTTGGTCCCCCCACTATCG
ACCTCCGCGCAATGTCCTCCCTCCCTTCTTCCCTCCCTTCCTCCCTCCGG
AAGAAGATTGACATTCACGTTTACATACCCCAGTGCCTCCCCTCTGCTGC
TGTGGGGGCATATGCCCTCCCTGCCTTTCTTGCCCTCGTTGCTGCGTGCT
GGCCTGGTCTCCGGGGCTCCCTCGATGGGACTGGTAGCTTGGGCGAATTG
AACGGGATGGGAACCATGTCACTGCACTCCTGTCGCCTCCCTCCCTCCTT
CGTGTCTTCCCTCCCTTCCTCGGTGATTCGCAAAATGGTCATGCCCAGGG
CGCAAGCGTGTGAGCTGGTGAGGAGCGGGGGCGGGGTGGGAGATAAGTGG
CTGCTGGGCAACGGTGTACTAGTGGTGGGAGCAGAGAGTATTCTGGACGC
GATCCAGTGTTTTTTTCTGGGGAACGATGGGATCTAG
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protein sequence of NO19G01540.1

>NO19G01540.1-protein ID=NO19G01540.1-protein|Name=NO19G01540.1|organism=Nannochloropsis oceanica|type=polypeptide|length=506bp
MDLGLLSPFTSVARKSVNSSSSSSSKSSMMEDEKNVQMRGIAARVQDRCS
TSSSIFVMKCSVLPCSRSSSSSSSSSSCNLWVSKERLALKPNVVVMGELM
LCGNIISGYSHRQHRGKERGREGEEECVLAGMLRAAREGGVGCLILPKDM
QEDVASFLCANAAGAASAAVAGAAGAAAAAAAAPKADVRFLFAEDIVDLL
GFLSLLVGKRLSCTHEEKGWTGEREEGWIYVAPTLLPVDDVSVSFRRVEV
AVLLGGGRGQFLVTTTGLASSSSSSLSSFTFSSPSSSVTASPILLSSNSI
NRTSSSGSNGNIISSRRRSNCGGGKGEGGGGAVCAAINVARVLLLKNQQQ
LCQFLGPPTIDLRAMSSLPSSLPSSLRKKIDIHVYIPQCLPSAAVGAYAL
PAFLALVAACWPGLRGSLDGTGSLGELNGMGTMSLHSCRLPPSFVSSLPS
SVIRKMVMPRAQACELVRSGGGVGDKWLLGNGVLVVGAESILDAIQCFFL
GNDGI*
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Synonyms
Publications