NO19G01440, NO19G01440 (gene) Nannochloropsis oceanica

Overview
NameNO19G01440
Unique NameNO19G01440
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1747
Alignment locationchr19:443064..444810 +

Link to JBrowse

Properties
Property NameValue
DescriptionS-adenosyl-L-methionine-dependent methyltransferases superfamily protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr19genomechr19:443064..444810 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process
GO:0008152metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0008168methyltransferase activity
GO:0016740transferase activity
Vocabulary: INTERPRO
TermDefinition
IPR029063SAM-dependent_MTases
IPR013216Methyltransf_11
Homology
BLAST of NO19G01440 vs. NCBI_GenBank
Match: EWM23628.1 (putative methyltransferase mitochondrial-like protein [Nannochloropsis gaditana])

HSP 1 Score: 421.0 bits (1081), Expect = 3.200e-114
Identity = 221/303 (72.94%), Postives = 252/303 (83.17%), Query Frame = 0
Query:   11 AATATAKA-FGRLRHRPISVPVTIVAGRPAASSFSSMPTMNIFDRAGKKRQRARASLASNWPEYDYLRAEVAKRLVDRLEDIMREFPEALELGAYGPHVAKEICAVQGLSGKGGAGGIERLVRCGVTEQGLL---LPSSSHSSSSPLKILPVLADEEHLPFSPQSFDLIISNLSLHWINDLPHAMRQACQALKPDGVLLASMLGGNTLKELRIALQLAEQEREGGISPHVSPAAHVADCGALLQAAGFALPTVDVDTLIVNFPDALVLMEHLQGMGESSAILTRRQHVSRETFLAAAAIYQVG 310
            +A ATAK+ +       IS    IV     AS  SSMP++ IFDR GKKRQR+RA+   +W EY+YLRAEVAKRLVDRLEDIMR+FP+ALELGAYGPH+A+E+ AV+GL+GKGGAGGIE LVRCG+TE+GLL   + S S +     KIL ++ DEEHLPFSP SFDLI+SNLSLHWINDLP AM QA + LKPDGV LASM GGNTLKELR+A QLAEQEREGGISPHVSP+AHVADCG+LLQAAGFALPTVDVDT+ V++PDALVLMEHLQGMGESSAILTRR +VSRETFLAAAAIYQVG
Sbjct:    7 SAVATAKSVYMSAARGRISTQFPIV-----ASPLSSMPSLTIFDRVGKKRQRSRAATKPDWAEYEYLRAEVAKRLVDRLEDIMRDFPQALELGAYGPHIAQEVNAVKGLNGKGGAGGIETLVRCGLTEEGLLPASMTSKSVTQEGDAKILNLVGDEEHLPFSPASFDLIVSNLSLHWINDLPGAMNQAREVLKPDGVFLASMFGGNTLKELRVAFQLAEQEREGGISPHVSPSAHVADCGSLLQAAGFALPTVDVDTITVSYPDALVLMEHLQGMGESSAILTRRPYVSRETFLAAAAIYQVG 304          
BLAST of NO19G01440 vs. NCBI_GenBank
Match: CBN76063.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 301.2 bits (770), Expect = 3.700e-78
Identity = 160/291 (54.98%), Postives = 199/291 (68.38%), Query Frame = 0
Query:   35 AGRPAASS---FSSMPTMNIFDRAGKKRQRARASLASNWPEYDYLRAEVAKRLVDRLEDIMREFPEALELGAYGPHVAKEICAVQGLSGKGGAGGIERLVRCGVTEQGLLLPSSS---------------HSSSSPLKILPVLADEEHLPFSPQSFDLIISNLSLHWINDLPHAMRQACQALKPDGVLLASMLGGNTLKELRIALQLAEQEREGGISPHVSPAAHVADCGALLQAAGFALPTVDVDTLIVNFPDALVLMEHLQGMGESSAILTRRQHVSRETFLAAAAIYQ 308
            A RP A S       P + +FDR  K+RQR RA+ A    E+DYLR  +A+ LVDR+EDI REFP AL++GA+  H+   IC   GL+GKGG GG+E L +C ++E+ LL  +SS                  S  +    V+ADEE LPF+P SFDL++SNL+LHW+NDLP A+ Q  Q LKPDG  + +MLGG+TL ELR  L LAEQEREGG S H SP+AHVADCG+LLQ+AGF+LPTVD DT+ V +P+A VLMEHLQGMGES+A +  R  VSRET LAAAA YQ
Sbjct:   21 ACRPFAGSGGGGDGTPAVKVFDRTAKRRQRDRAAAADWEGEFDYLREHIARVLVDRIEDISREFPRALDVGAHAGHIYNAICEKPGLNGKGGVGGVEHLTQCDISEKALLRGASSSRXXXXXXXXXXXXXEEGSVEVGTCCVVADEEFLPFAPASFDLVLSNLALHWVNDLPGALGQIKQVLKPDGAFIGAMLGGSTLTELRSCLLLAEQEREGGQSIHTSPSAHVADCGSLLQSAGFSLPTVDQDTVRVGYPNAFVLMEHLQGMGESNAAVNTRPRVSRETMLAAAAAYQ 311          
BLAST of NO19G01440 vs. NCBI_GenBank
Match: OQS01137.1 (hypothetical protein ACHHYP_20069 [Achlya hypogyna])

HSP 1 Score: 243.8 bits (621), Expect = 7.000e-61
Identity = 133/264 (50.38%), Postives = 180/264 (68.18%), Query Frame = 0
Query:   48 TMNIFDRAGKKRQRARASLASNWPEYDYLRAEVAKRLVDRLEDIMREFPEALELGAYGPHVAKEICAVQGLSGKGGAGGIERLVRCGVTEQGLLLPSSSHSSSSPLKILP---VLADEEHLPFSPQSFDLIISNLSLHWINDLPHAMRQACQALKPDGVLLASMLGGNTLKELRIALQLAEQEREGGISPHVSPAAHVADCGALLQAAGFALPTVDVDTLIVNFPDALVLMEHLQGMGESSAILTRRQHV-SRETFLAAAAIYQ 308
            +M +F+RA K++QR  A++ +N  EY+YLR EVA+RLVDRLEDI REFP A +LGA   ++ K       L+   G GGI++L++    E+ LL   ++   +   + L    +  DEE LPF P+  DL+IS+ +LHW+NDLP    Q  +ALKPDGV L ++LGG++L ELR +  LA+QER+GGI PH+SP  +VAD G LLQ+AGFALPTVD D + + +PDA +LMEHLQGM E++A  T    V SR+T LA AAIYQ
Sbjct:   15 SMQVFNRAMKRQQRNNAAMLTNSTEYEYLREEVARRLVDRLEDIDREFPLAADLGAGSGYIYK------SLAPDAGLGGIKKLLQFEFAEKLLLRDVNTPEEAERNRKLATEYICGDEEFLPFPPKHLDLVISSCALHWVNDLPSTFSQVLEALKPDGVFLGAVLGGDSLCELRSSFILADQERKGGILPHISPFVNVADAGNLLQSAGFALPTVDTDYITIEYPDAFILMEHLQGMAENNAPFTSSSIVPSRDTLLATAAIYQ 272          
BLAST of NO19G01440 vs. NCBI_GenBank
Match: XP_012196837.1 (hypothetical protein SPRG_02860 [Saprolegnia parasitica CBS 223.65] >KDO32383.1 hypothetical protein SPRG_02860 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 243.4 bits (620), Expect = 9.100e-61
Identity = 135/264 (51.14%), Postives = 176/264 (66.67%), Query Frame = 0
Query:   48 TMNIFDRAGKKRQRARASLASNWPEYDYLRAEVAKRLVDRLEDIMREFPEALELGAYGPHVAKEICAVQGLSGKGGAGGIERLVRCGVTEQGLLLPSSSHSSSSPLKILP---VLADEEHLPFSPQSFDLIISNLSLHWINDLPHAMRQACQALKPDGVLLASMLGGNTLKELRIALQLAEQEREGGISPHVSPAAHVADCGALLQAAGFALPTVDVDTLIVNFPDALVLMEHLQGMGESSAILTRRQHV-SRETFLAAAAIYQ 308
            +M +F+RA K++QR  A+  +N  EY+YLR EVA+RLVDRLEDI REFP AL+LGA   H+ K       L+   G GGI++L++    E  LL    +    +    LP   +  DEE LPF P  FDL+IS+ +LHW+NDLP    Q  + LKPDGV L ++LGG++L ELR +  LA+QER+GGI PH+SP  +VAD G LLQ+AGF LPTVD D + V +PDA VLMEHLQGM E++A  +      SR+T LAAA+IYQ
Sbjct:   15 SMQVFNRAMKRQQRNNAAQLANSTEYEYLREEVARRLVDRLEDIDREFPLALDLGAGSGHIYK------SLAPDAGLGGIKKLLQFEFAENLLLRDVQTPEEVARNAKLPTEYICGDEEFLPFPPHHFDLVISSCNLHWVNDLPSTFTQVLETLKPDGVFLGAVLGGDSLCELRSSFILADQERKGGILPHISPFVNVADAGNLLQSAGFTLPTVDTDYITVEYPDAFVLMEHLQGMAENNAPFSSSAIAPSRDTLLAAASIYQ 272          
BLAST of NO19G01440 vs. NCBI_GenBank
Match: XP_008906583.1 (hypothetical protein PPTG_12117 [Phytophthora parasitica INRA-310] >ETN08295.1 hypothetical protein PPTG_12117 [Phytophthora parasitica INRA-310])

HSP 1 Score: 241.9 bits (616), Expect = 2.700e-60
Identity = 134/284 (47.18%), Postives = 184/284 (64.79%), Query Frame = 0
Query:   24 HRPISVPVTIVAGRPAASSFSSMPTMNIFDRAGKKRQRARASLASNWPEYDYLRAEVAKRLVDRLEDIMREFPEALELGAYGPHVAKEICAVQGLSGKGGAGGIERLVRCGVTEQGLLLPSSSHSSSSPLKILPVLADEEHLPFSPQSFDLIISNLSLHWINDLPHAMRQACQALKPDGVLLASMLGGNTLKELRIALQLAEQEREGGISPHVSPAAHVADCGALLQAAGFALPTVDVDTLIVNFPDALVLMEHLQGMGESSAILTRRQHVSRETFLAAAAIYQ 308
            H  ++   T+     A  SFS+ P   IF+R  K++QR   +L  N  EY+YL+ EVA+RL+DRLEDI REF  AL+LG    H+ K       LS   G GG+++L++C   E+  LL      + + L+ L +  DEE LPF  Q FDL++S+LSLHW+NDL    RQ    LKPDG  + ++LGG++L+ELR A  L +QER+GGISPH+SP  +VAD G LL A GF L TVD D + V++P+A VLMEHL+GMGE+ A+ +R    +R++ LAAA+IYQ
Sbjct:   63 HTAMNRLATLAQRAVARRSFSTAP---IFNRGVKRQQRNNIALLENSDEYEYLKDEVARRLIDRLEDIEREFTLALDLGCGSGHLYK------NLSVDDGLGGVKKLIQCDSAEK--LLLRDDLETKTTLETLRLAVDEEFLPFPKQHFDLVMSSLSLHWVNDLESTFRQVLDTLKPDGAFIGAVLGGDSLQELRSAFILGDQERQGGISPHISPFMNVADAGNLLSATGFNLCTVDTDYIQVDYPNAFVLMEHLRGMGENHAVNSRGAPATRDSLLAAASIYQ 335          
BLAST of NO19G01440 vs. NCBI_GenBank
Match: CCA18665.1 (conserved unknown protein putative [Albugo laibachii Nc14])

HSP 1 Score: 240.4 bits (612), Expect = 7.700e-60
Identity = 130/263 (49.43%), Postives = 178/263 (67.68%), Query Frame = 0
Query:   45 SMPTMNIFDRAGKKRQRARASLASNWPEYDYLRAEVAKRLVDRLEDIMREFPEALELGAYGPHVAKEICAVQGLSGKGGAGGIERLVRCGVTEQGLLLPSSSHSSSSPLKILPVLADEEHLPFSPQSFDLIISNLSLHWINDLPHAMRQACQALKPDGVLLASMLGGNTLKELRIALQLAEQEREGGISPHVSPAAHVADCGALLQAAGFALPTVDVDTLIVNFPDALVLMEHLQGMGESSAILTRRQHVSRETFLAAAAIYQ 308
            S P+ NIFDR  K++QR   +  +N  +++YL+ EVAKRLVDRL+DI R FP AL+LGA   H+ K +C            GI+ L++C ++E+ LL  S+S      L+      DEE LPF    FDLIIS+L+LHW+NDLP    Q    LKPDG  + ++LGG+TL+ELR A  LA+QER GGISPH+SP  +VAD G LLQ AGF+L TVD D + V++P+AL LMEHLQGMGE++A + + + +++++ LA A+IYQ
Sbjct:   24 SSPSANIFDRTVKRQQRNNIAALANRRDFEYLKDEVAKRLVDRLQDIERTFPLALDLGAGAGHIYKALCE------DDERFGIQELLQCDLSEKLLLNSSASRIREDSLQTSYFAVDEEFLPFKKSHFDLIISSLNLHWVNDLPSTFTQIRDCLKPDGAFIGAVLGGDTLQELRSAFILADQERLGGISPHISPFMNVADAGNLLQGAGFSLCTVDTDYIQVDYPNALSLMEHLQGMGENNASVLKGR-MTKDSLLATASIYQ 279          
BLAST of NO19G01440 vs. NCBI_GenBank
Match: XP_008604397.1 (hypothetical protein SDRG_00687 [Saprolegnia diclina VS20] >EQC41828.1 hypothetical protein SDRG_00687 [Saprolegnia diclina VS20])

HSP 1 Score: 239.6 bits (610), Expect = 1.300e-59
Identity = 133/264 (50.38%), Postives = 175/264 (66.29%), Query Frame = 0
Query:   48 TMNIFDRAGKKRQRARASLASNWPEYDYLRAEVAKRLVDRLEDIMREFPEALELGAYGPHVAKEICAVQGLSGKGGAGGIERLVRCGVTEQGLLLPSSSHSSSSPLKILP---VLADEEHLPFSPQSFDLIISNLSLHWINDLPHAMRQACQALKPDGVLLASMLGGNTLKELRIALQLAEQEREGGISPHVSPAAHVADCGALLQAAGFALPTVDVDTLIVNFPDALVLMEHLQGMGESSAILTRRQHV-SRETFLAAAAIYQ 308
            +M +F+RA K++QR   +  +N  EY+YLR EVA+RLVDRLEDI REFP AL+LGA   H+ K       L+   G GGI++L++    E  LL    +   ++    LP   +  DEE LPF    FDL+IS+ +LHW+NDLP    Q  + LKPDGV L ++LGG++L ELR +  LA+QER+GGI PH+SP  +VAD G LLQ+AGF LPTVD D + V +PDA VLMEHLQGM E++A  +      SR+T LAAA+IYQ
Sbjct:   15 SMQVFNRAMKRQQRNNVAQLANSTEYEYLREEVARRLVDRLEDIDREFPLALDLGAGSGHIYK------SLAPDAGLGGIKKLLQFEFAEDLLLRDVQTPEETARNAKLPTEHICGDEEFLPFPRHHFDLVISSCNLHWVNDLPSTFTQVLETLKPDGVFLGAVLGGDSLCELRSSFILADQERKGGILPHISPFVNVADAGNLLQSAGFTLPTVDTDYITVEYPDAFVLMEHLQGMAENNAPFSSSAIAPSRDTLLAAASIYQ 272          
BLAST of NO19G01440 vs. NCBI_GenBank
Match: ETI45856.1 (hypothetical protein F443_09650 [Phytophthora parasitica P1569] >ETL39286.1 hypothetical protein L916_09348 [Phytophthora parasitica] >ETM45705.1 hypothetical protein L914_09309 [Phytophthora parasitica] >ETP43774.1 hypothetical protein F442_09558 [Phytophthora parasitica P10297])

HSP 1 Score: 239.6 bits (610), Expect = 1.300e-59
Identity = 133/284 (46.83%), Postives = 183/284 (64.44%), Query Frame = 0
Query:   24 HRPISVPVTIVAGRPAASSFSSMPTMNIFDRAGKKRQRARASLASNWPEYDYLRAEVAKRLVDRLEDIMREFPEALELGAYGPHVAKEICAVQGLSGKGGAGGIERLVRCGVTEQGLLLPSSSHSSSSPLKILPVLADEEHLPFSPQSFDLIISNLSLHWINDLPHAMRQACQALKPDGVLLASMLGGNTLKELRIALQLAEQEREGGISPHVSPAAHVADCGALLQAAGFALPTVDVDTLIVNFPDALVLMEHLQGMGESSAILTRRQHVSRETFLAAAAIYQ 308
            H  ++   T+     A  SFS+ P   IF+R  K++QR   +L  N  EY+YL+ EVA+RL+DRLEDI REF  AL+LG    H+ K       LS   G GG+++L++C   E+  LL      + + L+   +  DEE LPF  Q FDL++S+LSLHW+NDL    RQ    LKPDG  + ++LGG++L+ELR A  L +QER+GGISPH+SP  +VAD G LL A GF L TVD D + V++P+A VLMEHL+GMGE+ A+ +R    +R++ LAAA+IYQ
Sbjct:   63 HTAMNRLATLAQRAVARRSFSTAP---IFNRGVKRQQRNNIALLENSDEYEYLKDEVARRLIDRLEDIEREFTLALDLGCGSGHLYK------NLSVDDGLGGVKKLIQCDSAEK--LLLRDDLETETTLETSRLAVDEEFLPFPKQHFDLVMSSLSLHWVNDLESTFRQVLDTLKPDGAFIGAVLGGDSLQELRSAFILGDQERQGGISPHISPFMNVADAGNLLSATGFNLCTVDTDYIQVDYPNAFVLMEHLRGMGENHAVNSRGAPATRDSLLAAASIYQ 335          
BLAST of NO19G01440 vs. NCBI_GenBank
Match: ETO74567.1 (hypothetical protein F444_09717 [Phytophthora parasitica P1976])

HSP 1 Score: 239.6 bits (610), Expect = 1.300e-59
Identity = 133/284 (46.83%), Postives = 183/284 (64.44%), Query Frame = 0
Query:   24 HRPISVPVTIVAGRPAASSFSSMPTMNIFDRAGKKRQRARASLASNWPEYDYLRAEVAKRLVDRLEDIMREFPEALELGAYGPHVAKEICAVQGLSGKGGAGGIERLVRCGVTEQGLLLPSSSHSSSSPLKILPVLADEEHLPFSPQSFDLIISNLSLHWINDLPHAMRQACQALKPDGVLLASMLGGNTLKELRIALQLAEQEREGGISPHVSPAAHVADCGALLQAAGFALPTVDVDTLIVNFPDALVLMEHLQGMGESSAILTRRQHVSRETFLAAAAIYQ 308
            H  ++   T+     A  SFS+ P   IF+R  K++QR   +L  N  EY+YL+ EVA+RL+DRLEDI REF  AL+LG    H+ K       LS   G GG+++L++C   E+  LL      + + L+   +  DEE LPF  Q FDL++S+LSLHW+NDL    RQ    LKPDG  + ++LGG++L+ELR A  L +QER+GGISPH+SP  +VAD G LL A GF L TVD D + V++P+A VLMEHL+GMGE+ A+ +R    +R++ LAAA+IYQ
Sbjct:   43 HTAMNRLATLAQRAVARRSFSTAP---IFNRGVKRQQRNNIALLENSDEYEYLKDEVARRLIDRLEDIEREFTLALDLGCGSGHLYK------NLSVDDGLGGVKKLIQCDSAEK--LLLRDDLETETTLETSRLAVDEEFLPFPKQHFDLVMSSLSLHWVNDLESTFRQVLDTLKPDGAFIGAVLGGDSLQELRSAFILGDQERQGGISPHISPFMNVADAGNLLSATGFNLCTVDTDYIQVDYPNAFVLMEHLRGMGENHAVNSRGAPATRDSLLAAASIYQ 315          
BLAST of NO19G01440 vs. NCBI_GenBank
Match: KUF79229.1 (H-or Na-translocating F-type [Phytophthora nicotianae])

HSP 1 Score: 239.6 bits (610), Expect = 1.300e-59
Identity = 133/284 (46.83%), Postives = 183/284 (64.44%), Query Frame = 0
Query:   24 HRPISVPVTIVAGRPAASSFSSMPTMNIFDRAGKKRQRARASLASNWPEYDYLRAEVAKRLVDRLEDIMREFPEALELGAYGPHVAKEICAVQGLSGKGGAGGIERLVRCGVTEQGLLLPSSSHSSSSPLKILPVLADEEHLPFSPQSFDLIISNLSLHWINDLPHAMRQACQALKPDGVLLASMLGGNTLKELRIALQLAEQEREGGISPHVSPAAHVADCGALLQAAGFALPTVDVDTLIVNFPDALVLMEHLQGMGESSAILTRRQHVSRETFLAAAAIYQ 308
            H  ++   T+     A  SFS+ P   IF+R  K++QR   +L  N  EY+YL+ EVA+RL+DRLEDI REF  AL+LG    H+ K       LS   G GG+++L++C   E+  LL      + + L+   +  DEE LPF  Q FDL++S+LSLHW+NDL    RQ    LKPDG  + ++LGG++L+ELR A  L +QER+GGISPH+SP  +VAD G LL A GF L TVD D + V++P+A VLMEHL+GMGE+ A+ +R    +R++ LAAA+IYQ
Sbjct:  423 HTAMNRLATLAQRAVARRSFSTAP---IFNRGVKRQQRNNIALLENSDEYEYLKDEVARRLIDRLEDIEREFTLALDLGCGSGHLYK------NLSVDDGLGGVKKLIQCDSAEK--LLLRDDLETETTLETSRLAVDEEFLPFPKQHFDLVMSSLSLHWVNDLESTFRQVLDTLKPDGAFIGAVLGGDSLQELRSAFILGDQERQGGISPHISPFMNVADAGNLLSATGFNLCTVDTDYIQVDYPNAFVLMEHLRGMGENHAVNSRGAPATRDSLLAAASIYQ 695          
The following BLAST results are available for this feature:
BLAST of NO19G01440 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM23628.13.200e-11472.94putative methyltransferase mitochondrial-like prot... [more]
CBN76063.13.700e-7854.98conserved unknown protein [Ectocarpus siliculosus][more]
OQS01137.17.000e-6150.38hypothetical protein ACHHYP_20069 [Achlya hypogyna... [more]
XP_012196837.19.100e-6151.14hypothetical protein SPRG_02860 [Saprolegnia paras... [more]
XP_008906583.12.700e-6047.18hypothetical protein PPTG_12117 [Phytophthora para... [more]
CCA18665.17.700e-6049.43conserved unknown protein putative [Albugo laibach... [more]
XP_008604397.11.300e-5950.38hypothetical protein SDRG_00687 [Saprolegnia dicli... [more]
ETI45856.11.300e-5946.83hypothetical protein F443_09650 [Phytophthora para... [more]
ETO74567.11.300e-5946.83hypothetical protein F444_09717 [Phytophthora para... [more]
KUF79229.11.300e-5946.83H-or Na-translocating F-type [Phytophthora nicotia... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL013nonsL013Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL012nonsL012Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR034ncniR034Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR039ngnoR039Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR037ngnoR037Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO19G01440.1NO19G01440.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO19G01440.2NO19G01440.2-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|599103gene_7539Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100137g20gene6827Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO19G01440.1NO19G01440.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO19G01440.2NO19G01440.2Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO19G01440 ID=NO19G01440|Name=NO19G01440|organism=Nannochloropsis oceanica|type=gene|length=1747bp
AACAGGACAATGTTGGTAATAAAAAGAAGCCAGGCGTCTGCCGCGACTGC
AACAGCAAAGGCATTCGGCAGGCTCAGACACAGGCCTATTTCCGTCCCAG
TAACGATTGTAGCAGGCCGGCCGGCAGCCTCCTCCTTCTCATCCATGCCC
ACCATGAACATCTTTGACCGGGCGGGGAAGAAACGTCAGCGTGCCCGGGC
TTCCTTGGCATCTAACTGGCCCGAATACGATTATTTGAGGGCGGAAGTTG
CCAAGAGACTTGTGGATCGGTTGGAAGACATTATGCGTGAATTCCCAGAG
GCCTTGGAGTTGGGGGCGTACGGCCCTCACGTTGCCAAGGAGATTTGTGC
TGTCCAGGGATTGAGTGGCAgtaagtagtagagtcaccttacaccaagag
agtatgctcgtcgtcttccctttcagcacatacatacgctcatatacaca
cacatacaaatatacgcatacatctttacgcagAGGGTGGTGCAGGTGGA
ATCGAACGCCTGGTCCGCTGCGGCGTCACCGAGCAAGGCCTCCTCCTTCC
CTCTTCCTCTCATTCTTCTTCTTCACCGCTCAAAATCCTTCCCGTCCTGG
CTGACGAGGAACATCTTCCCTTCTCCCCCCAGTCCTTCGATTTGATCATC
AGCAATCTCTCTTTGCATTGGATCAATGACCTCCCCCACGCGATGAGACA
AGCCTGCCAAGCCCTAAAACCCGACGGCGTCCTCCTTGCTTCCATGCTCG
GCGGCAACACCCTCAAAGAGCTTAGGATCGCTCTACAACTCGCCGAACAA
GAAAGAGAAGGGGGTATCTCCCCCCATGTCTCCCCAGCGGCGCATGTGGC
TGATTGTGGGGCACTATTGCAAGCGGCGGGCTTTGCGTTGCCAACGGTGG
ACGTGGATACACTGATTGTAAATTTCCCGGACGCTTTGGTGTTGATGGAG
CATCTGCAGGGAATGGGAGAGAGCAGTGCCATATTGACGCGTAGACAACA
CGTTAGTCGAGAGACCTTCCTGGCAGCAGCTGCTATATATCAGGTAGGGG
CATAGAGATGGAGGGATGGAGAGGAAGCGTTGGTGTTGATGGGCCATTGG
CAGGGAACGAGAGAGTCACGGTCCATTCTGCTGACACGGTGGCCATGTGT
GAGTCAAGCAATTTTTGTGGCAGCATCCACCAGATATCAGATTGGGGAGG
AGGGGCAAGGGCAAGGGCGGGAGGGTAAAAGATTATAGTTGCAGGGCATC
TTTGTGTTATGCTCACACATACTCATTTGAACCTTCCACTCATTCCTGTT
TTCTTCTTCAGGAGCTCTATGGGGAAAACGACGGGTCGGTCCCGGCTACG
TTTCAAGTTGTGTACATGATTGGATGGGCGCCGCACGAGTCGCAGCCACA
GCCCAAGAAGCGGGGTTCGGGGAAGGTGAGTCTCAAGATGCTGCAGAAAG
GGGATATTAGCGAGGGCGGGAATGATGGCAGTGGTGGGTGTTCAAGGCAC
AAATAGAAGTAAACATGGAAATGGAAGGAAAAGAGGAGAGTGAGTGATAC
TTTCTAAATTGAGTAGTCGCAGTTCAATAGAAAAATGAAGTAAAAGAAAT
GGAAAGCTGTGGACTTCCAAAAAAATCAGAGTTCAAATTTGCTGTGTGAG
TAGTCGATAGGAAGAAAATGCAGAGAGACTAAAAGGAGGGAGGAATGAAT
GAGAAACGAGAGAGGGACGAGCTACGGGATCCTCTTTTCCATGTGTG
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protein sequence of NO19G01440.1

>NO19G01440.1-protein ID=NO19G01440.1-protein|Name=NO19G01440.1|organism=Nannochloropsis oceanica|type=polypeptide|length=372bp
MLVIKRSQASAATATAKAFGRLRHRPISVPVTIVAGRPAASSFSSMPTMN
IFDRAGKKRQRARASLASNWPEYDYLRAEVAKRLVDRLEDIMREFPEALE
LGAYGPHVAKEICAVQGLSGKGGAGGIERLVRCGVTEQGLLLPSSSHSSS
SPLKILPVLADEEHLPFSPQSFDLIISNLSLHWINDLPHAMRQACQALKP
DGVLLASMLGGNTLKELRIALQLAEQEREGGISPHVSPAAHVADCGALLQ
AAGFALPTVDVDTLIVNFPDALVLMEHLQGMGESSAILTRRQHVSRETFL
AAAAIYQELYGENDGSVPATFQVVYMIGWAPHESQPQPKKRGSGKVSLKM
LQKGDISEGGNDGSGGCSRHK*
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protein sequence of NO19G01440.2

>NO19G01440.2-protein ID=NO19G01440.2-protein|Name=NO19G01440.2|organism=Nannochloropsis oceanica|type=polypeptide|length=311bp
MLVIKRSQASAATATAKAFGRLRHRPISVPVTIVAGRPAASSFSSMPTMN
IFDRAGKKRQRARASLASNWPEYDYLRAEVAKRLVDRLEDIMREFPEALE
LGAYGPHVAKEICAVQGLSGKGGAGGIERLVRCGVTEQGLLLPSSSHSSS
SPLKILPVLADEEHLPFSPQSFDLIISNLSLHWINDLPHAMRQACQALKP
DGVLLASMLGGNTLKELRIALQLAEQEREGGISPHVSPAAHVADCGALLQ
AAGFALPTVDVDTLIVNFPDALVLMEHLQGMGESSAILTRRQHVSRETFL
AAAAIYQVGA*
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Synonyms
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