NO19G01420, NO19G01420 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO19G01420 vs. NCBI_GenBank
Match: XP_011629290.1 (uncharacterized protein LOC18425237 isoform X1 [Amborella trichopoda]) HSP 1 Score: 112.5 bits (280), Expect = 2.900e-21 Identity = 62/178 (34.83%), Postives = 103/178 (57.87%), Query Frame = 0 Query: 199 NSLPFLQKRKEAMEKEMASIDENLQTLSEQFGELAGEWDGKVAVMKRDYDNLKAKYYNDTLEVATTGRSNVFVEIMGVVDDFERARMAYKPGGEEEAAILESYEGVKDAIVKGMMNEGLVEVKTVGEPFDFKLHDCMFTEASDEWPEDIITREFSKGFMIGEKVVRPAKVACSLGPGP 377 ++L ++K +++E E S+ + LSE EL+ E D +V + D+DN + + + L + + + V ++ ++D+FERA+ K E E I SY+ + V+ M++ G+V V TVG PFD LH+ + E S E+ E II +EF KGF +G++++RP+ V S GPGP Sbjct: 145 STLVEIEKFLQSIEVEKNSLSNKVAALSE---ELSSERD-RVLRISADFDNFRKRTERERLSLVSNAQGEVIENLLPILDNFERAKAQIKVETEGEEKINNSYQSIYKQFVEIMVSLGVVGVDTVGNPFDPLLHEAIMREDSTEFEESIILQEFRKGFKLGDRLLRPSMVKVSAGPGP 318
BLAST of NO19G01420 vs. NCBI_GenBank
Match: XP_006647500.2 (PREDICTED: protein GrpE-like, partial [Oryza brachyantha]) HSP 1 Score: 112.1 bits (279), Expect = 3.800e-21 Identity = 70/233 (30.04%), Postives = 125/233 (53.65%), Query Frame = 0 Query: 149 AMDDDKGKTDKIKEELEHELPVGEHEEEGAEAAGKP-----AAGAAPTTVVDDVFNSLPFLQKRKEAMEKEMASIDENLQTLSEQFGELAGEWDGKVAVMKRDYDNLKAKYYNDTLEVATTGRSNVFVEIMGVVDDFERARMAYKPGGEEEAAILESYEGVKDAIVKGMMNEGLVEVKTVGEPFDFKLHDCMFTEASDEWPEDIITREFSKGFMIGEKVVRPAKVACSLGPGP 377 A + D+ +EE E E+ ++GA A P A + + +D + +++ ++E+E S+ + TL EL+ E D ++ + D+DN + + + L + T + V ++ V+D+FERA+ K E+EA I +SY+ + ++ + + G+ +V+T+G+PFD LH+ + E S E+ E +I +EF KGF +GE+++RPA V S GPGP Sbjct: 5 ATEADEAAQTATEEESETEVTGDTGADDGAGAEETPSVLVTALQSYKEALANDDETKIAEIEEFLLSIEEEKNSLLSKIATLG---AELSTERD-RILRISADFDNYRKRVEREKLSLMTNVQGEVIENLLPVLDNFERAKTQIKVETEQEAKINDSYQSIYKQFIEILNSLGVEDVETIGKPFDPMLHEAIMREESVEYEEGVIIQEFRKGFKLGERLLRPAMVKVSAGPGP 233
BLAST of NO19G01420 vs. NCBI_GenBank
Match: GAQ77970.1 (heat shock protein GrpE [Klebsormidium nitens]) HSP 1 Score: 111.7 bits (278), Expect = 5.000e-21 Identity = 61/171 (35.67%), Postives = 100/171 (58.48%), Query Frame = 0 Query: 209 EAMEKEMASIDENLQTLSEQFGELAGEWD---GKVAVMKRDYDNLKAKYYNDTLEVATTGRSNVFVEIMGVVDDFERARMAYKPGGEEEAAILESYEGVKDAIVKGMMNEGLVEVKTVGEPFDFKLHDCMFTEASDEWPEDIITREFSKGFMIGEKVVRPAKVACSLGPGP 377 EA+E+++ +++ + + S + EL E + + + D+DN + + + +A++ R +V E++ ++D+FERAR A K E E I SY+G+ V + G+V V G PFD +H+ + E S+E+ E I+T+EF KGF IGEK++RPA V S GPGP Sbjct: 133 EALEEQLRALEGS--SSSSRAEELTKEMEVLKDRYLRLNADFDNFRKRSDREKASLASSVRGDVIEELLPMIDNFERARDAVKASTEGEQKIDASYQGIYKQFVDILKKLGIVPVPGAGTPFDPAVHEAIMQEESNEYAEGIVTQEFRKGFQIGEKLLRPAMVKVSSGPGP 301
BLAST of NO19G01420 vs. NCBI_GenBank
Match: XP_022036161.1 (uncharacterized protein LOC110938002 isoform X1 [Helianthus annuus] >OTG29733.1 putative grpE nucleotide exchange factor [Helianthus annuus]) HSP 1 Score: 111.7 bits (278), Expect = 5.000e-21 Identity = 55/183 (30.05%), Postives = 101/183 (55.19%), Query Frame = 0 Query: 194 VDDVFNSLPFLQKRKEAMEKEMASIDENLQTLSEQFGELAGEWDGKVAVMKRDYDNLKAKYYNDTLEVATTGRSNVFVEIMGVVDDFERARMAYKPGGEEEAAILESYEGVKDAIVKGMMNEGLVEVKTVGEPFDFKLHDCMFTEASDEWPEDIITREFSKGFMIGEKVVRPAKVACSLGPGP 377 + ++ L ++ K +E+++A++ + L T + +V + D+DN + + + + + + V ++ V+D+FERA+ A K E+E I SY+ + V+ + + G+V V+T G+PFD LH+ + E S E+ E ++ +EF KGF IGE+++RP+ V S GPGP Sbjct: 142 ISEIETYLKSIEDEKLVLERKLATLSDELSTAKD-----------RVLRISADFDNFRKRTERERISLVANAQGEVVENLLPVLDNFERAKAAIKVENEKEEKINNSYQSIYKQFVEILGSLGVVPVETTGQPFDPLLHEAIMREESTEFGEGVVIQEFRKGFRIGERLLRPSMVKVSAGPGP 313
BLAST of NO19G01420 vs. NCBI_GenBank
Match: PON63524.1 (GrpE nucleotide exchange factor [Trema orientalis]) HSP 1 Score: 111.7 bits (278), Expect = 5.000e-21 Identity = 58/194 (29.90%), Postives = 106/194 (54.64%), Query Frame = 0 Query: 183 KPAAGAAPTTVVDDVFNSLPFLQKRKEAMEKEMASIDENLQTLSEQFGELAGEWDGKVAVMKRDYDNLKAKYYNDTLEVATTGRSNVFVEIMGVVDDFERARMAYKPGGEEEAAILESYEGVKDAIVKGMMNEGLVEVKTVGEPFDFKLHDCMFTEASDEWPEDIITREFSKGFMIGEKVVRPAKVACSLGPGP 377 K A + + + ++ + L L+ K +E+++AS+ E + T + ++ + D+DN + + + + T + V ++ V+D+FERA++ K E E I SY+ + ++ + + G+V V+TVG PFD LH+ + E S+E+ E II +EF KGF +G++++RP+ V S GPGP Sbjct: 131 KEALASNDESKIAEIESFLKSLEDEKLGLERKLASLSEEMSTEKD-----------RILRISADFDNFRKRTERERTSLVTNAQGEVVESLLPVLDNFERAKVQIKVETEGEEKINNSYQSIYKQFIEILTSLGVVPVETVGNPFDPLLHEAIMREDSEEFEEGIILQEFRKGFKLGDRLLRPSMVKVSAGPGP 313
BLAST of NO19G01420 vs. NCBI_GenBank
Match: EMS64517.1 (Protein grpE [Triticum urartu]) HSP 1 Score: 111.3 bits (277), Expect = 6.600e-21 Identity = 69/219 (31.51%), Postives = 115/219 (52.51%), Query Frame = 0 Query: 172 EHEEEGAEAAGKPAAGAAPTTVVDDVFNSLPFLQKRKEAM----EKEMASIDENLQTLSEQFGELAGEWDG----------KVAVMKRDYDNLKAKYYNDTLEVATTGRSNVFVEIMGVVDDFERARMAYKPGGEEEAAILESYEGVKDAIVKGMMNEGLVEVKTVGEPFDFKLHDCMFTEASDEWPEDIITREFSKGFMIGEKVVRPAKVACSLGPGP 377 E E G A +AG T V + LQ KEA+ E ++A I+ L T+ ++ L G+ ++ + D+DN + + + L + T + V ++ V+D+FERA+ K E EA I +SY+ + +V+ + + G+ +V+TVG+PFD LH+ + E S E+ + ++ +EF KGF +GE+++RPA V S GPGP Sbjct: 6 ETEVTGGTVADDGSAGTEETPSV-----LITALQSYKEALMNDDEAKIAEIESFLLTIEDEKNSLMGKITALDAELTTERDRIVRISSDFDNYRKRTEREKLSLMTNVQGEVVESLLPVLDNFERAKTQIKVETEREAKINDSYQSIYKQLVEILKSLGVEDVETVGKPFDPMLHEAIMREESVEYEDGVVLQEFRKGFKLGERLLRPAMVKVSAGPGP 219
BLAST of NO19G01420 vs. NCBI_GenBank
Match: XP_023543468.1 (uncharacterized protein LOC111803344 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 111.3 bits (277), Expect = 6.600e-21 Identity = 60/170 (35.29%), Postives = 102/170 (60.00%), Query Frame = 0 Query: 209 EAMEKEMASIDENLQTLSEQFGELAGEWDGKVAVMK--RDYDNLKAKYYNDTLEVATTGRSNVFVEIMGVVDDFERARMAYKPGGEEEAAILESYEGVKDAIVKGMMNEGLVEVKTVGEPFDFKLHDCMFTEASDEWPEDIITREFSKGFMIGEKVVRPAKVACSLGPGP 377 +++E E +++ L++L+E EL+ E KV +++ D+DN + + + L + + V ++GV+D+FERAR K E E I +SY+ + + + + G+V V+T+G+PFD LH+ + E S E+ E II EF KGF++GE+++RP+ V S GPGP Sbjct: 147 KSIEDEKLAVERKLESLTE---ELSVE---KVRILRISADFDNFRKRTERERLSLVKNAQGEVVETLLGVLDNFERARAQIKVETEGEEKINQSYQSIYKQFTEILGSLGVVPVETIGKPFDPLLHEAIMREDSTEFEEGIILNEFRKGFLLGERLLRPSMVKVSAGPGP 310
BLAST of NO19G01420 vs. NCBI_GenBank
Match: XP_011070018.1 (uncharacterized protein LOC105155769 isoform X1 [Sesamum indicum]) HSP 1 Score: 110.9 bits (276), Expect = 8.600e-21 Identity = 59/168 (35.12%), Postives = 98/168 (58.33%), Query Frame = 0 Query: 209 EAMEKEMASIDENLQTLSEQFGELAGEWDGKVAVMKRDYDNLKAKYYNDTLEVATTGRSNVFVEIMGVVDDFERARMAYKPGGEEEAAILESYEGVKDAIVKGMMNEGLVEVKTVGEPFDFKLHDCMFTEASDEWPEDIITREFSKGFMIGEKVVRPAKVACSLGPGP 377 +++E E ++ + TLSE EL+ E D +V + D+DN + + + L + T + V ++ V+D+FERA+ K E E I SY+ + + + + G+V V+TVG+PFD LH+ + E S E+ + II E+ KGF++GE+++RP+ V S GPGP Sbjct: 157 KSIEDEKIGLERKVATLSE---ELSSERD-RVLRISADFDNFRKRTERERLSLVTNAQGEVVESLLSVLDNFERAKAQIKVETEGEEKINNSYQSIYKQFSEILGSLGVVPVETVGKPFDPMLHEAIMREDSTEYEDGIIIEEYRKGFLLGERLLRPSMVKVSAGPGP 320
BLAST of NO19G01420 vs. NCBI_GenBank
Match: WP_075486761.1 (nucleotide exchange factor GrpE [Prochlorococcus marinus]) HSP 1 Score: 110.9 bits (276), Expect = 8.600e-21 Identity = 62/181 (34.25%), Postives = 100/181 (55.25%), Query Frame = 0 Query: 195 DDVFNSLPFLQKRKEAMEKEMASIDENLQTLSEQFGELAGEWDGKVAVMKRDYDNLKAKYYNDTLEVATTGRSNVFVEIMGVVDDFERARMAYKPGGEEEAAILESYEGVKDAIVKGMMNEGLVEVKTVGEPFDFKLHDCMFTEASDEWPEDIITREFSKGFMIGEKVVRPAKVACSLGPG 376 +++ N++ R E +EKE +TL Q+ ++ ++D RD D+LKA+ + +L I+ +VD+FERAR KP GEE A+ SY+G+ +V+ + +G+ ++ VG+PFD LH+ + E SDE+ EDII E +G+ + KV+R A V S+GPG Sbjct: 50 EELKNTISNNDARLEQLEKEH-------ETLKNQYVRISADFDNFRKRQSRDQDDLKAQLVSKSL-----------TAILPIVDNFERARQQLKPEGEEAQALHRSYQGLYKQLVEVLKQQGVAPMRVVGQPFDPNLHEAVLREPSDEYKEDIILEELQRGYHLDGKVLRHALVKVSMGPG 212
BLAST of NO19G01420 vs. NCBI_GenBank
Match: PON76639.1 (GrpE nucleotide exchange factor [Parasponia andersonii]) HSP 1 Score: 110.9 bits (276), Expect = 8.600e-21 Identity = 61/201 (30.35%), Postives = 108/201 (53.73%), Query Frame = 0 Query: 175 EEGAEAAGKPAAGAAPTTVVDDVFNSLPFLQKRKEAMEKEMASIDENLQTLSEQFGELAGEWDGKVAVMKRDYDNLKAKYYNDTLEVATTGRSNVFVEIMGVVDDFERARMAYKPGGEEEAAILESYEGVKDAIVKGMMNEGLVEVKTVGEPFDFKLHDCMFTEASDEWPEDIITREFSKGFMIGEKVVRPAKVACSLGPG 376 E+ E + K +++ N++ ++ R + + + + N+ TL+E+ K ++ D+DN + + D L + T + V ++ +VD+FERA+ KP ++E I SY+G+ V+ M + + V TVG+PFD LH+ + E S E+ E II +EF +GF++G++++RPA V SLGPG Sbjct: 91 EQNGELSLKSLIKVYKEAILEGDENTVSAIESRMDLIGNDKDELVLNVSTLTEEI----KSGKEKYIRLQADFDNFRKRTEKDRLSIRTDAQGEVIESLLAMVDNFERAKQQLKPETDKEKKIDASYQGIYKQFVEIMRSLRVAVVPTVGKPFDPALHEAIAREESQEFKEGIIIQEFRRGFLLGDRLLRPATVKVSLGPG 287 The following BLAST results are available for this feature:
BLAST of NO19G01420 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO19G01420 ID=NO19G01420|Name=NO19G01420|organism=Nannochloropsis oceanica|type=gene|length=1131bpback to top protein sequence of NO19G01420.1 >NO19G01420.1-protein ID=NO19G01420.1-protein|Name=NO19G01420.1|organism=Nannochloropsis oceanica|type=polypeptide|length=377bpback to top Synonyms
Publications
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