NO19G01420, NO19G01420 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO19G01420 vs. NCBI_GenBank
Match: EWM23643.1 (heat shock protein [Nannochloropsis gaditana]) HSP 1 Score: 384.8 bits (987), Expect = 3.100e-103 Identity = 212/292 (72.60%), Postives = 233/292 (79.79%), Query Frame = 0 Query: 86 TATLLGLLLATNSLVNAFLPITPVLM-RSSIRIQTLSSNIAMNYISFRPASPAFNHAPVALAAAAMDDDKGKTDKIKEELEHELPVGEHEEEGAEAAGKPAAGAAPTTVVDDVFNSLPFLQKRKEAMEKEMASIDENLQTLSEQFGELAGEWDGKVAVMKRDYDNLKAKYYNDTLEVATTGRSNVFVEIMGVVDDFERARMAYKPGGEEEAAILESYEGVKDAIVKGMMNEGLVEVKTVGEPFDFKLHDCMFTEASDEWPEDIITREFSKGFMIGEKVVRPAKVACSLGPGP 377 TA LLGL L T +LV+AF+P T + RSS Q LS + + F+ S A H P+ +AAA DDD GK DK++EELEHELP GEHEE A A T VDDVFNSLPFLQKRKEAMEKEMASIDENL + E+F ELAGEWDGKVAVM++D++NLKAKYYNDT EVA TGRSNVFVEIM VVDDFERARMAYK GEEEA ILE+YEGVKDAI+KGMM EGLVEVKTVGEPFDFKLHDCMFTE SDE+PED+ITREFSKGFMIGEKVVRPAKVACSLGPGP Sbjct: 19 TAVLLGLFLTTGTLVHAFVPATHISKGRSS---QPLS--VRAWILPFQ--SQARFHVPLLQSAAATDDDAGK-DKLEEELEHELPEGEHEEADRSTA------APATNAVDDVFNSLPFLQKRKEAMEKEMASIDENLAMMEEKFSELAGEWDGKVAVMQKDFENLKAKYYNDTQEVAVTGRSNVFVEIMSVVDDFERARMAYKQVGEEEAVILEAYEGVKDAILKGMMAEGLVEVKTVGEPFDFKLHDCMFTEQSDEYPEDVITREFSKGFMIGEKVVRPAKVACSLGPGP 296
BLAST of NO19G01420 vs. NCBI_GenBank
Match: AFA52569.1 (heat shock protein GrpE [Vaucheria litorea]) HSP 1 Score: 131.0 bits (328), Expect = 8.000e-27 Identity = 61/179 (34.08%), Postives = 111/179 (62.01%), Query Frame = 0 Query: 195 DDVFNSLPFLQKRKEAMEKEMASIDENLQTLSEQFGELAGEWDGKVAVMKRDYDNLKAKYYNDTLEVATTGRSNVFVEIMGVVDDFERARMAYKPGGEEEAAILESYEGVKDAIVKGMMNEGLVEVKTVGEPFDFKLHDCMFTEASDEWPEDIITREFSKGFMIGEKVVRPAKVACSLG 374 DD+ + FL K+ E + K++A +E + + + + EW ++ ++R+++N++A+ NDT+E +T+ + V EI+ V D+F RA A P E E A+++ Y+ + + + + G+ + TVGEPFD+ LH+ + ++S E+ EDI+ E +KGFM+G++++RPA VA S G Sbjct: 68 DDLLQTPQFLTKKIEVLNKQIAKKEEEISAANLEADKEWEEWGPQIERLEREFENVRARMLNDTMEASTSAKVKVLKEILAVSDNFMRASQAISPSTEGEIAVVDYYKSIYEEMQAVFVALGMKPIATVGEPFDYNLHEAVMRQSS-EFDEDIVCLELTKGFMVGKELIRPAMVAVSTG 245
BLAST of NO19G01420 vs. NCBI_GenBank
Match: CBN76646.1 (heat shock protein GrpE [Ectocarpus siliculosus]) HSP 1 Score: 126.7 bits (317), Expect = 1.500e-25 Identity = 68/212 (32.08%), Postives = 115/212 (54.25%), Query Frame = 0 Query: 167 ELPVGEHEEEGAEAAGK----PAAGAAPTTVVDDVFNSLPFLQKRKEAMEKEMASIDENLQTLSEQFGELAGEWDGKVAVMKRDYDNLKAKYYNDTLEVATTGRSNVFVEIMGVVDDFERARMAYKPGGEEEAAILESYEGVKDAIVKGMMNEGLVEVKTVGEPFDFKLHDCMFTEASDEWPEDIITREFSKGFMIGEKVVRPAKVACSLGP 375 E P G + AG+ P + AA VDD+ NS FL K+ E ++K++ + ++ T Q E EW +V +++++ LK + + G++ I+GV D+FERA A + E A++ Y+ D ++K + LVEV T+G PFD+ +H+ + E +DE+PED++ + F KG+ +G+ +VRPA VA ++ P Sbjct: 70 EQPAGPFSSWVKKTAGRFGRGPFSRAAKKDEVDDLLNSDAFLNKKVEMLQKQINATQADIVTAQAQADEQWAEWGPQVQRLEKEFSALKGRGGEARTQAYNKGKAEAINNILGVADNFERAAGAISAETDGERAVVAYYKDTYDNMMKCLEGLDLVEVDTIGAPFDYNIHNAIMRENTDEFPEDVVCKVFQKGYQVGDTLVRPAMVAVAVPP 281
BLAST of NO19G01420 vs. NCBI_GenBank
Match: OMO69937.1 (GrpE nucleotide exchange factor [Corchorus capsularis]) HSP 1 Score: 119.0 bits (297), Expect = 3.100e-23 Identity = 77/238 (32.35%), Postives = 127/238 (53.36%), Query Frame = 0 Query: 155 GKTDKIKEELEHELPVGEHEEEGAEAAGKPAAGAAPTTVVDDVFNS--LPFLQKRKEAM-----------EKEMASIDENLQTLSEQFGELAGEWD---GKVAVMKRDYDNLKAKYYNDTLEVATTGRSNVFVEIMGVVDDFERARMAYKPGGEEEAAILESYEGVKDAIVKGMMNEGLVEVKTVGEPFDFKLHDCMFTEASDEWPEDIITREFSKGFMIGEKVVRPAKVACSLGPGP 377 G+T+ + + E + P E +GA A + AA A ++ VDD+ +S + LQ KEA+ E + SI+++ L ++ G L E +V + D+DN + + + L + T + V ++ V+D+FERA+ K E E I SY+ + ++ + + G+ V+TVG PFD LH+ + E S+E+ E II +EF KGF IG++++RP+ V S GPGP Sbjct: 68 GETETTETQQEVQEPQIEDSSDGAVAVEEDAAAADESSDVDDIPSSGMVSLLQAYKEALASNDESKVANIEAYLNSIEDDKVDLEKKVGSLLEELSVEKDRVLRISADFDNFRKRTERERLSLVTNAQGEVLENLLPVLDNFERAKAQIKIETEGEEKINNSYQSIYKQFMEILGSLGVEPVETVGNPFDPMLHEAIMREDSEEFEEGIIIQEFRKGFKIGDRLLRPSMVKVSAGPGP 305
BLAST of NO19G01420 vs. NCBI_GenBank
Match: XP_024391116.1 (uncharacterized protein LOC112289777 [Physcomitrella patens] >PNR44343.1 hypothetical protein PHYPA_016727 [Physcomitrella patens]) HSP 1 Score: 115.2 bits (287), Expect = 4.500e-22 Identity = 63/196 (32.14%), Postives = 107/196 (54.59%), Query Frame = 0 Query: 181 AGKPAAGAAPTTVVDDVFNSLPFLQKRKEAMEKEMASIDENLQTLSEQFGELAGEWDGKVAVMKRDYDNLKAKYYNDTLEVATTGRSNVFVEIMGVVDDFERARMAYKPGGEEEAAILESYEGVKDAIVKGMMNEGLVEVKTVGEPFDFKLHDCMFTEASDEWPEDIITREFSKGFMIGEKVVRPAKVACSLGPGP 377 A + A A + DV + L + ++++ ++ S+ E + T +++ L D+DN + + D L A R V ++ +VD+FERA+ + K E E I +Y+G+ V+ M + G+V V+TVG+PFD LH+ + E S E+ ED++++EF +GF IG++++RPA V S GPGP Sbjct: 114 AYREAVAADDEGAISDVESQLEAIANERDSLGLKVNSLIEEISTNKDRYLRL-----------NADFDNYRKRSERDRLATAGNVRGEVIESLLPMVDNFERAKTSIKTETEAEQKIDNAYQGIYKQFVEIMKSLGVVAVETVGKPFDPNLHEAIMREDSTEFAEDVVSQEFRRGFRIGDRLLRPAMVKVSSGPGP 298
BLAST of NO19G01420 vs. NCBI_GenBank
Match: ADB23407.1 (chloroplast CGE1 [Physcomitrella patens]) HSP 1 Score: 114.8 bits (286), Expect = 5.900e-22 Identity = 63/196 (32.14%), Postives = 107/196 (54.59%), Query Frame = 0 Query: 181 AGKPAAGAAPTTVVDDVFNSLPFLQKRKEAMEKEMASIDENLQTLSEQFGELAGEWDGKVAVMKRDYDNLKAKYYNDTLEVATTGRSNVFVEIMGVVDDFERARMAYKPGGEEEAAILESYEGVKDAIVKGMMNEGLVEVKTVGEPFDFKLHDCMFTEASDEWPEDIITREFSKGFMIGEKVVRPAKVACSLGPGP 377 A + A A + DV + L + ++++ ++ S+ E + T +++ L D+DN + + D L A R V ++ +VD+FERA+ + K E E I +Y+G+ V+ M + G+V V+TVG+PFD LH+ + E S E+ ED++++EF +GF IG++++RPA V S GPGP Sbjct: 114 AYREAVAADDEGAISDVESQLEAIANERDSLGLKVNSLIEEISTNKDRYLRL-----------NADFDNYRKRSERDRLATAGNVRGEVIESLLPMVDNFERAKTSIKTETEAEQKIDXAYQGIYKQFVEIMKSLGVVAVETVGKPFDPNLHEAIMREDSTEFAEDVVSQEFRRGFRIGDRLLRPAMVKVSSGPGP 298
BLAST of NO19G01420 vs. NCBI_GenBank
Match: XP_015885577.1 (PREDICTED: protein GrpE [Ziziphus jujuba]) HSP 1 Score: 114.4 bits (285), Expect = 7.700e-22 Identity = 62/172 (36.05%), Postives = 101/172 (58.72%), Query Frame = 0 Query: 204 LQKRKEAMEKEMASIDENLQTLSEQFGELAGEWDGKVAVMKRDYDNLKAKYYNDTLEVATTGRSNVFVEIMGVVDDFERARMAYKPGGEEEAAILESYEGVKDAIVKGMMNEGLVEVKTVGEPFDFKLHDCMFTEASDEWPEDIITREFSKGFMIGEKVVRPAKVACSLGPG 376 ++ R + +EKEM +D+ L TL+ +G+ K ++ D+DN + + + L V T + V ++ +VD+FERA+ KP E+E I SY+G+ V+ M + + V TVG+PFD LH+ + E S E+ E II +EF +GF++G++++RPA V S GPG Sbjct: 127 VEARIDRIEKEMHELDQKLSTLTADI--TSGK--EKYIRLQADFDNFRKRSEKERLTVRTNAQGEVIESLLPMVDNFERAKQQIKPETEKEIKIDASYQGIYKQFVEIMRSLHVAVVATVGKPFDPLLHEAIAREESHEFKEGIIIQEFRRGFLLGDRLLRPATVKVSSGPG 294
BLAST of NO19G01420 vs. NCBI_GenBank
Match: XP_022154525.1 (uncharacterized protein LOC111021782 isoform X1 [Momordica charantia]) HSP 1 Score: 114.0 bits (284), Expect = 1.000e-21 Identity = 61/168 (36.31%), Postives = 100/168 (59.52%), Query Frame = 0 Query: 209 EAMEKEMASIDENLQTLSEQFGELAGEWDGKVAVMKRDYDNLKAKYYNDTLEVATTGRSNVFVEIMGVVDDFERARMAYKPGGEEEAAILESYEGVKDAIVKGMMNEGLVEVKTVGEPFDFKLHDCMFTEASDEWPEDIITREFSKGFMIGEKVVRPAKVACSLGPGP 377 +++E E +++ LQ+L+E EL E D ++ + D+DN + + + L + + V ++GV+D+FERAR K E E I +SY+ + + + + G+V V+TVG+PFD LH+ + E S E+ E II EF KGF++GE+++RP+ V S GPGP Sbjct: 147 KSIEDEKLAVERKLQSLTE---ELTIEKD-RILRISADFDNFRKRTERERLSLVKNAQGEVVETLLGVLDNFERARAQIKVETEGEEKINQSYQSIYKQFTEILASLGVVPVETVGKPFDPLLHEAIMREDSTEFEEGIILDEFRKGFLLGERLLRPSMVKVSAGPGP 310
BLAST of NO19G01420 vs. NCBI_GenBank
Match: XP_023883907.1 (uncharacterized protein LOC111996184 isoform X1 [Quercus suber] >XP_023883908.1 uncharacterized protein LOC111996184 isoform X2 [Quercus suber] >POE71139.1 protein grpe [Quercus suber]) HSP 1 Score: 114.0 bits (284), Expect = 1.000e-21 Identity = 62/194 (31.96%), Postives = 107/194 (55.15%), Query Frame = 0 Query: 183 KPAAGAAPTTVVDDVFNSLPFLQKRKEAMEKEMASIDENLQTLSEQFGELAGEWDGKVAVMKRDYDNLKAKYYNDTLEVATTGRSNVFVEIMGVVDDFERARMAYKPGGEEEAAILESYEGVKDAIVKGMMNEGLVEVKTVGEPFDFKLHDCMFTEASDEWPEDIITREFSKGFMIGEKVVRPAKVACSLGPGP 377 K A + + V ++ + L +++ K ++E ++AS+ E L T E ++ + D+DN + + D L + T + V ++ V+D+FERA+ K E E I SY+ + ++ + + G+V V+TVG PFD LH+ + E S+E+ E II +EF KGF +G++++RP+ V S GPGP Sbjct: 129 KEALASNDESGVAEIESFLKSIEEEKISLEGKVASLSEELLTEKE-----------RILRISADFDNFRKRTERDRLSLLTNAQGEVVESLLPVLDNFERAKSQIKVETEGEEKINNSYQSISKQFIEILNSLGVVPVETVGNPFDPLLHEAIMREDSNEYEEGIIIQEFRKGFKLGDRLLRPSMVKVSAGPGP 311
BLAST of NO19G01420 vs. NCBI_GenBank
Match: KVI12173.1 (GrpE nucleotide exchange factor [Cynara cardunculus var. scolymus]) HSP 1 Score: 113.2 bits (282), Expect = 1.700e-21 Identity = 59/168 (35.12%), Postives = 99/168 (58.93%), Query Frame = 0 Query: 209 EAMEKEMASIDENLQTLSEQFGELAGEWDGKVAVMKRDYDNLKAKYYNDTLEVATTGRSNVFVEIMGVVDDFERARMAYKPGGEEEAAILESYEGVKDAIVKGMMNEGLVEVKTVGEPFDFKLHDCMFTEASDEWPEDIITREFSKGFMIGEKVVRPAKVACSLGPGP 377 +++E E ++ L TLS+ EL+ D +V + D+DN + + + L + + V ++GV+D+FERA+ K E+E I SY+ + V+ + + G+V V+T+G+PFD LH+ + E S E+ E ++ +EF KGF IGE+++RP+ V S GPGP Sbjct: 150 KSIEDEKLVLERQLATLSD---ELSNAKD-RVLRISADFDNFRKRTERERLSLVANAQGEVVENLLGVLDNFERAKSQIKVDTEKEEKINNSYQSIYKQFVEVLGSLGVVPVETIGQPFDPLLHEAIMREDSTEFDEGVVIQEFRKGFRIGERLLRPSMVKVSAGPGP 313 The following BLAST results are available for this feature:
BLAST of NO19G01420 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO19G01420 ID=NO19G01420|Name=NO19G01420|organism=Nannochloropsis oceanica|type=gene|length=1131bpback to top protein sequence of NO19G01420.1 >NO19G01420.1-protein ID=NO19G01420.1-protein|Name=NO19G01420.1|organism=Nannochloropsis oceanica|type=polypeptide|length=377bpback to top Synonyms
Publications
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