NO19G01410, NO19G01410 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO19G01410 vs. NCBI_GenBank
Match: EWM23644.1 (trna pseudouridine synthase mitochondrial [Nannochloropsis gaditana]) HSP 1 Score: 532.7 bits (1371), Expect = 1.800e-147 Identity = 349/760 (45.92%), Postives = 423/760 (55.66%), Query Frame = 0 Query: 36 KRKSGGSEEVGGEDGCAYKHPRFNDSKEPHSGSYAAQVR--ENEDGQGIQLGNKKKVALVIGYCGTDFQGMQMNPGAASIEAELEKAMFEAGCIKKENFGNLQKIGWSRAGRTDKGVHAAAQIVGCKLHVKMK------------------------------------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTGMV---KEGNMRDISIAMTTADSDTAVATE--------AXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSPDDLADAFERTRDSINEKLPPSIRVHGVLRATRGFNAKNDCTKRRYCYWLPTFLLADAEGREEREGGVKGGVGAWLDACAQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSPSANYPQPDMGLLKQCYLERLKPYRVSRQKIDLLKNTLKRYLGTHKFHNFSIRMSYRSGAVQRYIMGVEVSEPVVVMEGGEETSEETGKGEGIEWCSITVVGQAFLLHQIRKMVAVAIKITRGSATPTLIEDAYEDVMLTLPMAPSDGLFLDKAFFEQYNNRATQIGLAASLDWEDDSGGATNQKQVPSLSVAVLKERVKRFKEEAIVGHITKSEGKTLAFTKWLYHGRFKYEKSGGKDVFAARGLTIAEQRSEVPKKEVMAAKIKEKDEKDGMRR--------GEEGKEKEDVVID 733 KRK S+E E G K F + + PHSGSYAA+ R +EDGQ + LGNKKKVA++IGYCGTDFQGMQMNPGA +IEAELEKAM+EAGCIK+ NFG+LQKIGWSR+GRTDKGVHAAAQ+VGCKLHVKMK XXXXX G V +EG +++ + AD ++ E A +PD LA A E TR +IN +LPPSIR+HG+LRATRGFNAKNDCT+RRYCYWLPTFLLA+ E VGAWLD CA XXXXXXXXXXXX S NYPQPD+ L+QC+ RL+ YR S ++++ L TL++Y+GTHKFHNFSIRMS+RSG+V+RYIM VE+ +PVVV E G G+ +G+EW +T+ GQAFLLHQIRKMVAVAI ++RGSA TLIEDAY+DVMLTLPMAPS+GL+LDKA F YN RATQIG AASLDWE + + PSLSV VL+ER++RF EE IVGHI + E KTL FTKW+YH R KYE G D FAARGLT+AEQRSE PKK+VMA ++E++E +R E+GKE+E ++++ Sbjct: 49 KRK---SDESAAEKG-GPKRQCFYEDRAPHSGSYAAKQRHENSEDGQDL-LGNKKKVAMIIGYCGTDFQGMQMNPGAITIEAELEKAMYEAGCIKEANFGSLQKIGWSRSGRTDKGVHAAAQVVGCKLHVKMKSEENVDENRKEEEENAEGTGKGGANESLHAGKEGEEGWSSMEIVKEGGPPMGAQEDETSDKVKSKCSESAGXXXXXTGEGGEVSAPVGKVEGREEGGHAPGAVSPSEADGPENISHENTSGGTIAAPFTTLSTSKGDGESEGRPDALSQEPPHRPPPAPDALAAALEATRMAINRQLPPSIRIHGILRATRGFNAKNDCTRRRYCYWLPTFLLAEVE-----------EVGAWLDGCAXXXXXXXXXXXXXEAGGAQGI------------------------------------------------------------------------SLNYPQPDLSALRQCFRSRLRVYRASSRQLERLGRTLRKYVGTHKFHNFSIRMSFRSGSVKRYIMAVEMGDPVVVGEDG-------GEDKGLEWVCVTLTGQAFLLHQIRKMVAVAIMVSRGSAPATLIEDAYQDVMLTLPMAPSEGLYLDKASFALYNQRATQIGQAASLDWEGEEEEEDKGGRAPSLSVGVLRERIRRFLEEEIVGHILRREDKTLVFTKWMYHCRQKYE-MGELDAFAARGLTVAEQRSEAPKKQVMAEMMQEREEAARGKRLEQQEGACDEQGKEEEKLLVE 712
BLAST of NO19G01410 vs. NCBI_GenBank
Match: XP_005855852.1 (trna pseudouridine synthase, partial [Nannochloropsis gaditana CCMP526] >EKU20509.1 trna pseudouridine synthase, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 214.5 bits (545), Expect = 1.100e-51 Identity = 147/340 (43.24%), Postives = 174/340 (51.18%), Query Frame = 0 Query: 36 KRKSGGSEEVGGEDGCAYKHPRFNDSKEPHSGSYAAQVR-EN-EDGQGIQLGNKKKVALVIGYCGTDFQGMQMNPGAASIEAELEKAMFEAGCIKKENFGNLQKIGWSRAGRTDKGVHAAAQIVGCKLHVKMK------------------------------------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTGMV---KEGNMRDISIAMTTADSDTAVATE--------AXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSPDDLADAFERTRDSINEKLPPSIRVHGVLRATRGFNAKNDCTKRRYCYW 321 KRK S+E E+G K F + + PHSGSYAA+ R EN EDGQ + LGNKKKVA++IGYCGTDFQGMQMNPGA +IEAELEKAM+EAGCIK+ NFG+LQKIGWSR+GRTDKGVHAAAQ+VGCKLHVKMK XXXXX G V +EG +++ + A ++ E A +PD LA A E TR +IN +LPPSIR+HG+LRATRGFNAKNDCT+RRYCYW Sbjct: 42 KRK---SDESAAEEG-GPKRQCFYEDRAPHSGSYAAKQRHENAEDGQDL-LGNKKKVAMIIGYCGTDFQGMQMNPGAITIEAELEKAMYEAGCIKEANFGSLQKIGWSRSGRTDKGVHAAAQVVGCKLHVKMKSEENVDENRKEEEENAEGTGKGGANESLHAGKEGEEGWSSMEIVKEGGPPMGAQEDETSDKVKSKCSESAGXXXXXTGEGGEVSAPVGKVEGREEGGHAPGAVSPSEAGGPENISHENTSGGTIAAPFTTLSTSKGDGESEGRPDALSQEPPHRPPPAPDALAAALEATRMAINRQLPPSIRIHGILRATRGFNAKNDCTRRRYCYW 376
BLAST of NO19G01410 vs. NCBI_GenBank
Match: ETP45636.1 (tRNA pseudouridine(38-40) synthase [Phytophthora parasitica P10297]) HSP 1 Score: 176.8 bits (447), Expect = 2.500e-40 Identity = 167/644 (25.93%), Postives = 237/644 (36.80%), Query Frame = 0 Query: 36 KRKSGGSEEVGGEDGCAYKHP----RFNDSKEPHSGSYAAQVRENE-DGQGIQ-LGNKKKVALVIGYCGTDFQGMQMNPGAASIEAELEKAMFEAGCIKKENFGNLQKIGWSRAGRTDKGVHAAAQIVGCKLHVKMKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTGMVKEGNMRDISIAMTTADSDTAVATEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSPDDLADAFERTRDSINEKLPPSIRVHGVLRATRGFNAKNDCTKRRYCYWLPTFLL-----ADAEGREEREGGVKGGVGAWLDACAQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSPSANYPQPDMGLLKQCYLERLKPYRVSRQKIDLLKNTLKRYLGTHKFHNFSIRMSYRSGAVQRYIMGVEVSEPVVVMEGGEETSEETGKGEGIEWCSITVVGQAFLLHQIRKMVAVAIKITRGSATPTLIEDAYEDVMLTLPMAPSDGLFLDKAFFEQYNNRATQIGLAASLDWEDDSGGATNQKQVPSLSVAVLKERVKRFKEEAIVGHITKSEGKTLAFTKWL 669 +RK+ + G ++ K P R + S H GSYAAQ + +E +Q L K++ L + +CG ++ GMQMN G +IEAELE+A+FEAG I + N+G LQKIGWSRA RTDKGVHAA Q++ KLHV DD+A + +N LP IRV ++ T+ FNAK C +R Y Y PTF+ + A EE++ G W G + D ++ LE K +R+S + ++ L +TLK+Y+GTH FHNF+ +M + R+I+ E P V + +EW + VVGQ+FLLH IRKM+ A++I G + IE A E + LP APS GL+L +A FE YN + D S + K+ PS++ A V++FK + I HI K E +T + KWL Sbjct: 13 RRKNKQTRREGSDEQQQDKEPQPDRRADRSDAVHPGSYAAQRQPSETPAADVQSLPTKRRYGLWVAFCGKNYSGMQMNEGVKTIEAELERALFEAGGIAESNYGFLQKIGWSRAARTDKGVHAAGQLLTAKLHV------------------------------------------------------------------------------------------------------------GDDIAGFMAK----VNAALPEDIRVMHMVTVTKNFNAKMSCDQRTYEYLAPTFIFGKRTRSSASKNEEKQA---EGASQW---------------------------------------------------------------------------------------------PSGLRDSEEGFNDNVVIDSTTLEAHKAFRLSDETLEQLNHTLKQYVGTHNFHNFTSKMEPTNPQANRFIISFEAERPFVQND--------------MEWVRLRVVGQSFLLHHIRKMIGTAVEIVSGVTDHSTIERAMELTKMDLPKAPSVGLYLAQAHFEVYNMKMA--------DSIQTSHPPLDLKE-PSVAAA-----VEQFKRDFIFDHIMKHEERTRTYAKWL 420
BLAST of NO19G01410 vs. NCBI_GenBank
Match: ETI47755.1 (tRNA pseudouridine(38-40) synthase [Phytophthora parasitica P1569] >ETK87732.1 tRNA pseudouridine(38-40) synthase [Phytophthora parasitica] >ETL41172.1 tRNA pseudouridine(38-40) synthase [Phytophthora parasitica] >ETL94314.1 tRNA pseudouridine(38-40) synthase [Phytophthora parasitica] >ETP17605.1 tRNA pseudouridine(38-40) synthase [Phytophthora parasitica CJ01A1]) HSP 1 Score: 174.5 bits (441), Expect = 1.200e-39 Identity = 166/644 (25.78%), Postives = 234/644 (36.34%), Query Frame = 0 Query: 36 KRKSGGSEEVGGEDGCAYKHP----RFNDSKEPHSGSYAAQVRENE-DGQGIQ-LGNKKKVALVIGYCGTDFQGMQMNPGAASIEAELEKAMFEAGCIKKENFGNLQKIGWSRAGRTDKGVHAAAQIVGCKLHVKMKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTGMVKEGNMRDISIAMTTADSDTAVATEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSPDDLADAFERTRDSINEKLPPSIRVHGVLRATRGFNAKNDCTKRRYCYWLPTFLL-----ADAEGREEREGGVKGGVGAWLDACAQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSPSANYPQPDMGLLKQCYLERLKPYRVSRQKIDLLKNTLKRYLGTHKFHNFSIRMSYRSGAVQRYIMGVEVSEPVVVMEGGEETSEETGKGEGIEWCSITVVGQAFLLHQIRKMVAVAIKITRGSATPTLIEDAYEDVMLTLPMAPSDGLFLDKAFFEQYNNRATQIGLAASLDWEDDSGGATNQKQVPSLSVAVLKERVKRFKEEAIVGHITKSEGKTLAFTKWL 669 +RK+ + G ++ K P R + S H GSYAAQ + +E +Q L K++ L + +CG ++ GMQMN G +IEAELE+A+FEAG I + N+G LQKIGWSRA RTDKGVHAA Q++ KLHV DD+A + +N LP IRV ++ T+ FNAK C +R Y Y PTF+ + A EE++ G W D ++ LE K +R+S + ++ L TLK+Y+GTH FHNF+ +M + R+I+ E P V + +EW + VVGQ+FLLH IRKM+ A++I G + IE A E + LP APS GL+L +A FE YN + D S + K+ PS++ A V++FK + I HI K E +T + KWL Sbjct: 13 RRKNKQTRREGSDEQQQDKEPQPDRRADRSDAVHPGSYAAQRQPSETPAADVQSLPTKRRYGLWVAFCGKNYSGMQMNEGVKTIEAELERALFEAGGIAESNYGFLQKIGWSRAARTDKGVHAAGQLLTAKLHV------------------------------------------------------------------------------------------------------------GDDIAGFMAK----VNAALPEDIRVMHMVTVTKNFNAKMSCDQRTYEYLAPTFIFGKRTRSSASKNEEKQA---EGASQWPSDLRDSEEGFN---------------------------------------------------------------------------------------------DNVMIDSTTLEAHKAFRLSDETLEQLNATLKQYVGTHNFHNFTSKMEPTNPQANRFIISFEAERPFVQND--------------MEWVRLRVVGQSFLLHHIRKMIGTAVEIVSGVTDHSTIERAMELTKMDLPKAPSVGLYLAQAHFEVYNMKMA--------DSIQTSHPPLDLKE-PSVAAA-----VEQFKRDFIFDHIMKHEERTRTYAKWL 420
BLAST of NO19G01410 vs. NCBI_GenBank
Match: ETM47545.1 (tRNA pseudouridine(38-40) synthase [Phytophthora parasitica]) HSP 1 Score: 174.5 bits (441), Expect = 1.200e-39 Identity = 166/644 (25.78%), Postives = 234/644 (36.34%), Query Frame = 0 Query: 36 KRKSGGSEEVGGEDGCAYKHP----RFNDSKEPHSGSYAAQVRENED-GQGIQ-LGNKKKVALVIGYCGTDFQGMQMNPGAASIEAELEKAMFEAGCIKKENFGNLQKIGWSRAGRTDKGVHAAAQIVGCKLHVKMKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTGMVKEGNMRDISIAMTTADSDTAVATEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSPDDLADAFERTRDSINEKLPPSIRVHGVLRATRGFNAKNDCTKRRYCYWLPTFLL-----ADAEGREEREGGVKGGVGAWLDACAQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSPSANYPQPDMGLLKQCYLERLKPYRVSRQKIDLLKNTLKRYLGTHKFHNFSIRMSYRSGAVQRYIMGVEVSEPVVVMEGGEETSEETGKGEGIEWCSITVVGQAFLLHQIRKMVAVAIKITRGSATPTLIEDAYEDVMLTLPMAPSDGLFLDKAFFEQYNNRATQIGLAASLDWEDDSGGATNQKQVPSLSVAVLKERVKRFKEEAIVGHITKSEGKTLAFTKWL 669 +RK+ + G ++ K P R + S H GSYAAQ + +E +Q L K++ L + +CG ++ GMQMN G +IEAELE+A+FEAG I + N+G LQKIGWSRA RTDKGVHAA Q++ KLHV DD+A + +N LP IRV ++ T+ FNAK C +R Y Y PTF+ + A EE++ G W D ++ LE K +R+S + ++ L TLK+Y+GTH FHNF+ +M + R+I+ E P V + +EW + VVGQ+FLLH IRKM+ A++I G + IE A E + LP APS GL+L +A FE YN + D S + K+ PS++ A V++FK + I HI K E +T + KWL Sbjct: 13 RRKNKQTRREGSDEQQQDKEPQPDRRADRSDAVHPGSYAAQRQPSETRAADVQSLPTKRRYGLWVAFCGKNYSGMQMNEGVKTIEAELERALFEAGGIAESNYGFLQKIGWSRAARTDKGVHAAGQLLTAKLHV------------------------------------------------------------------------------------------------------------GDDIAGFMAK----VNAALPEDIRVMHMVTVTKNFNAKMSCDQRTYEYLAPTFIFGKRTRSSASKNEEKQA---EGASQWPSDLRDSEEGFN---------------------------------------------------------------------------------------------DNVMIDSTTLEAHKAFRLSDETLEQLNATLKQYVGTHNFHNFTSKMEPTNPQANRFIISFEAERPFVQND--------------MEWVRLRVVGQSFLLHHIRKMIGTAVEIVSGVTDHSTIERAMELTKMDLPKAPSVGLYLAQAHFEVYNMKMA--------DSIQTSHPPLDLKE-PSVAAA-----VEQFKRDFIFDHIMKHEERTRTYAKWL 420
BLAST of NO19G01410 vs. NCBI_GenBank
Match: XP_008904780.1 (tRNA pseudouridine(38-40) synthase [Phytophthora parasitica INRA-310] >ETN09634.1 tRNA pseudouridine(38-40) synthase [Phytophthora parasitica INRA-310] >KUF99105.1 MICAL protein [Phytophthora nicotianae]) HSP 1 Score: 174.5 bits (441), Expect = 1.200e-39 Identity = 166/644 (25.78%), Postives = 234/644 (36.34%), Query Frame = 0 Query: 36 KRKSGGSEEVGGEDGCAYKHP----RFNDSKEPHSGSYAAQVRENE-DGQGIQ-LGNKKKVALVIGYCGTDFQGMQMNPGAASIEAELEKAMFEAGCIKKENFGNLQKIGWSRAGRTDKGVHAAAQIVGCKLHVKMKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTGMVKEGNMRDISIAMTTADSDTAVATEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSPDDLADAFERTRDSINEKLPPSIRVHGVLRATRGFNAKNDCTKRRYCYWLPTFLL-----ADAEGREEREGGVKGGVGAWLDACAQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSPSANYPQPDMGLLKQCYLERLKPYRVSRQKIDLLKNTLKRYLGTHKFHNFSIRMSYRSGAVQRYIMGVEVSEPVVVMEGGEETSEETGKGEGIEWCSITVVGQAFLLHQIRKMVAVAIKITRGSATPTLIEDAYEDVMLTLPMAPSDGLFLDKAFFEQYNNRATQIGLAASLDWEDDSGGATNQKQVPSLSVAVLKERVKRFKEEAIVGHITKSEGKTLAFTKWL 669 +RK+ + G ++ K P R + S H GSYAAQ + +E +Q L K++ L + +CG ++ GMQMN G +IEAELE+A+FEAG I + N+G LQKIGWSRA RTDKGVHAA Q++ KLHV DD+A + +N LP IRV ++ T+ FNAK C +R Y Y PTF+ + A EE++ G W D ++ LE K +R+S + ++ L TLK+Y+GTH FHNF+ +M + R+I+ E P V + +EW + VVGQ+FLLH IRKM+ A++I G + IE A E + LP APS GL+L +A FE YN + D S + K+ PS++ A V++FK + I HI K E +T + KWL Sbjct: 13 RRKNKQTRREGSDEQQQDKEPQPDRRADRSDAVHPGSYAAQRQPSETPAADVQSLPTKRRYGLWVAFCGKNYSGMQMNEGVKTIEAELERALFEAGGIAESNYGFLQKIGWSRAARTDKGVHAAGQLLTAKLHV------------------------------------------------------------------------------------------------------------GDDIAGFMAK----VNAALPEDIRVMHMVTVTKNFNAKMSCDQRTYEYLAPTFIFGKRTRSSASKNEEKQA---EGASQWPSDLRDSEEGFN---------------------------------------------------------------------------------------------DNVMIDSTTLEAHKAFRLSDETLEQLNATLKQYVGTHNFHNFTSKMEPTNPQANRFIISFEAERPFVQND--------------MEWVRLRVVGQSFLLHHIRKMIGTAVEIVSGVTDHSTIERAMELTKMDLPKAPSVGLYLAQAHFEVYNMKMA--------DSIQTSHPPLDLKE-PSVAAA-----VEQFKRDFIFDHIMKHEERTRTYAKWL 420
BLAST of NO19G01410 vs. NCBI_GenBank
Match: ETO76521.1 (tRNA pseudouridine(38-40) synthase [Phytophthora parasitica P1976]) HSP 1 Score: 174.5 bits (441), Expect = 1.200e-39 Identity = 167/644 (25.93%), Postives = 235/644 (36.49%), Query Frame = 0 Query: 36 KRKSGGSEEVGGEDGCAYKHP----RFNDSKEPHSGSYAAQVRENE-DGQGIQ-LGNKKKVALVIGYCGTDFQGMQMNPGAASIEAELEKAMFEAGCIKKENFGNLQKIGWSRAGRTDKGVHAAAQIVGCKLHVKMKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTGMVKEGNMRDISIAMTTADSDTAVATEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSPDDLADAFERTRDSINEKLPPSIRVHGVLRATRGFNAKNDCTKRRYCYWLPTFLL-----ADAEGREEREGGVKGGVGAWLDACAQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSPSANYPQPDMGLLKQCYLERLKPYRVSRQKIDLLKNTLKRYLGTHKFHNFSIRMSYRSGAVQRYIMGVEVSEPVVVMEGGEETSEETGKGEGIEWCSITVVGQAFLLHQIRKMVAVAIKITRGSATPTLIEDAYEDVMLTLPMAPSDGLFLDKAFFEQYNNRATQIGLAASLDWEDDSGGATNQKQVPSLSVAVLKERVKRFKEEAIVGHITKSEGKTLAFTKWL 669 +RK+ + G ++ K P R + S H GSYAAQ + +E +Q L K++ L + +CG ++ GMQMN G +IEAELE+A+FEAG I N+G LQKIGWSRA RTDKGVHAA Q++ KLHV DD+A + +N LP IRV ++ T+ FNAK C +R Y Y PTF+ + A EE++ G W G + D ++ LE K +R+S + ++ L TLK+Y+GTH FHNF+ +M + R+I+ E P V + +EW + VVGQ+FLLH IRKM+ A++I G + IE A E + LP APS GL+L +A FE YN + D S + K+ PS++ A V++FK + I HI K E +T + KWL Sbjct: 13 RRKNKQTRREGSDEQQQDKEPQPDRRADRSDAVHPGSYAAQRQPSETPAADVQSLPTKRRYGLWVAFCGKNYSGMQMNEGVKTIEAELERALFEAGGIADSNYGFLQKIGWSRAARTDKGVHAAGQLLTAKLHV------------------------------------------------------------------------------------------------------------GDDIAGFMAK----VNAALPEDIRVMHMVTVTKNFNAKMSCDQRTYEYLAPTFIFGKRTRSSASKNEEKQA---EGASQW---------------------------------------------------------------------------------------------PSGLRDSEEGFNDNVVIDSTTLEAHKAFRLSDETLEQLNATLKQYVGTHNFHNFTSKMEPTNPQANRFIISFEAERPFVQND--------------MEWVRLRVVGQSFLLHHIRKMIGTAVEIVSGVTGHSTIERAMELTKMDLPKAPSVGLYLAQAHFEVYNMKMA--------DSIQTSHPPLDLKE-PSVAAA-----VEQFKRDFIFDHIMKHEERTRTYAKWL 420
BLAST of NO19G01410 vs. NCBI_GenBank
Match: KUF77764.1 (Pseudouridine synthase [Phytophthora nicotianae]) HSP 1 Score: 174.5 bits (441), Expect = 1.200e-39 Identity = 166/644 (25.78%), Postives = 234/644 (36.34%), Query Frame = 0 Query: 36 KRKSGGSEEVGGEDGCAYKHP----RFNDSKEPHSGSYAAQVRENE-DGQGIQ-LGNKKKVALVIGYCGTDFQGMQMNPGAASIEAELEKAMFEAGCIKKENFGNLQKIGWSRAGRTDKGVHAAAQIVGCKLHVKMKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTGMVKEGNMRDISIAMTTADSDTAVATEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSPDDLADAFERTRDSINEKLPPSIRVHGVLRATRGFNAKNDCTKRRYCYWLPTFLL-----ADAEGREEREGGVKGGVGAWLDACAQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSPSANYPQPDMGLLKQCYLERLKPYRVSRQKIDLLKNTLKRYLGTHKFHNFSIRMSYRSGAVQRYIMGVEVSEPVVVMEGGEETSEETGKGEGIEWCSITVVGQAFLLHQIRKMVAVAIKITRGSATPTLIEDAYEDVMLTLPMAPSDGLFLDKAFFEQYNNRATQIGLAASLDWEDDSGGATNQKQVPSLSVAVLKERVKRFKEEAIVGHITKSEGKTLAFTKWL 669 +RK+ + G ++ K P R + S H GSYAAQ + +E +Q L K++ L + +CG ++ GMQMN G +IEAELE+A+FEAG I + N+G LQKIGWSRA RTDKGVHAA Q++ KLHV DD+A + +N LP IRV ++ T+ FNAK C +R Y Y PTF+ + A EE++ G W D ++ LE K +R+S + ++ L TLK+Y+GTH FHNF+ +M + R+I+ E P V + +EW + VVGQ+FLLH IRKM+ A++I G + IE A E + LP APS GL+L +A FE YN + D S + K+ PS++ A V++FK + I HI K E +T + KWL Sbjct: 13 RRKNKQTRREGSDEQQQDKEPQPDRRADRSDAVHPGSYAAQRQPSETPAADVQSLPTKRRYGLWVAFCGKNYSGMQMNEGVKTIEAELERALFEAGGIAESNYGFLQKIGWSRAARTDKGVHAAGQLLTAKLHV------------------------------------------------------------------------------------------------------------GDDIAGFMAK----VNAALPEDIRVMHMVTVTKNFNAKMSCDQRTYEYLAPTFIFGKRTRSSASKNEEKQA---EGASQWPSDLRDSEEGFN---------------------------------------------------------------------------------------------DNVMIDSTTLEAHKAFRLSDETLEQLNATLKQYVGTHNFHNFTSKMEPTNPQANRFIISFEAERPFVQND--------------MEWVRLRVVGQSFLLHHIRKMIGTAVEIVSGVTDHSTIERAMELTKMDLPKAPSVGLYLAQAHFEVYNMKMA--------DSIQTSHPPLDLKE-PSVAAA-----VEQFKRDFIFDHIMKHEERTRTYAKWL 420
BLAST of NO19G01410 vs. NCBI_GenBank
Match: POM67945.1 (tRNA pseudouridine(38-40) synthase [Phytophthora palmivora var. palmivora]) HSP 1 Score: 174.5 bits (441), Expect = 1.200e-39 Identity = 169/645 (26.20%), Postives = 230/645 (35.66%), Query Frame = 0 Query: 36 KRKSGGSEEVGGEDGCAYKHP--RFNDSKEPHSGSYAAQ-VRENEDGQGIQLGNKKKVALVIGYCGTDFQGMQMNPGAASIEAELEKAMFEAGCIKKENFGNLQKIGWSRAGRTDKGVHAAAQIVGCKLHVKMKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTGMVKEGNMRDISIAMTTADSDTAVATEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSPDDLADAFERTRDSINEKLPPSIRVHGVLRATRGFNAKNDCTKRRYCYWLPTFLLA---------DAEGREEREGGVKGGVGAWLDACAQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSPSANYPQPDMGLLKQCYLERLKPYRVSRQKIDLLKNTLKRYLGTHKFHNFSIRMSYRSGAVQRYIMGVEVSEPVVVMEGGEETSEETGKGEGIEWCSITVVGQAFLLHQIRKMVAVAIKITRGSATPTLIEDAYEDVMLTLPMAPSDGLFLDKAFFEQYNNRATQIGLAASLDWEDDSGGATNQKQVPSLSVAVLKERVKRFKEEAIVGHITKSEGKTLAFTKWL 669 +RK+ + GGE P R + S H GSYAAQ R L K++ L + +CG ++ GMQMN G +IEAELE+A+FEAG I + N+G LQKIGWSRA RTDKGVHAA Q++ KLHV DD+ AF +N LP IRV ++ T+ FNAK C +R Y Y PTF+ DAE EE+E DA Q + D ++ LE K +R+ + ++ L TLK+Y+GTH FHNF+ +M + R+I+ E +P V + +EW + VVGQ+FLLH IRKM+ A++I G + IE A E + LP APS GL+L +A FE YN + D S + K+ P ++ A V++FK + I HI K E T + KWL Sbjct: 13 RRKNKQARHDGGEQQGKEPQPDRRADRSDTIHPGSYAAQHQRSQTPADSTSLPTKRRYGLWVAFCGKNYSGMQMNEGVKTIEAELERALFEAGGIAESNYGFLQKIGWSRAARTDKGVHAAGQLLTAKLHV------------------------------------------------------------------------------------------------------------GDDI-PAFVA---KVNAALPEDIRVMHMVTVTKNFNAKMTCDQRTYEYLAPTFIFGKRTRAAVPKDAEKSEEKEA----------DAATQWPSDLR--------------------------------------------------------------------------------------DSEEGLNDNVVIDSTTLEAHKAFRLDDETLEKLNTTLKQYVGTHNFHNFTSKMEPTNPQANRFIISFEAEQPFVQND--------------MEWVRLRVVGQSFLLHHIRKMIGTAVEIVSGVTDTSTIERAMELTKMDLPKAPSVGLYLAQAHFEVYNMKMA--------DSIQTSHPPLDLKE-PGVAAA-----VEQFKHDYIFDHIMKHEEHTRTYAKWL 421
BLAST of NO19G01410 vs. NCBI_GenBank
Match: XP_009513782.1 (hypothetical protein PHYSODRAFT_308307 [Phytophthora sojae] >EGZ26507.1 hypothetical protein PHYSODRAFT_308307 [Phytophthora sojae]) HSP 1 Score: 173.7 bits (439), Expect = 2.100e-39 Identity = 163/621 (26.25%), Postives = 226/621 (36.39%), Query Frame = 0 Query: 57 RFNDSKEPHSGSYAAQVRENE-----DGQGIQLGNKKKVALVIGYCGTDFQGMQMNPGAASIEAELEKAMFEAGCIKKENFGNLQKIGWSRAGRTDKGVHAAAQIVGCKLHVKMKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTGMVKEGNMRDISIAMTTADSDTAVATEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSPDDLADAFERTRDSINEKLPPSIRVHGVLRATRGFNAKNDCTKRRYCYWLPTFLLAD----AEGREEREGGVKGGVGAWLDACAQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSPSANYPQPDMGLLKQCYLERLKPYRVSRQKIDLLKNTLKRYLGTHKFHNFSIRMSYRSGAVQRYIMGVEVSEPVVVMEGGEETSEETGKGEGIEWCSITVVGQAFLLHQIRKMVAVAIKITRGSATPTLIEDAYEDVMLTLPMAPSDGLFLDKAFFEQYNNRATQIGLAASLDWEDDSGGATNQKQVPSLSVAVLKERVKRFKEEAIVGHITKSEGKTLAFTKWL 669 R S H GSYAAQ + D + L K++ L + +CG ++ GMQMN G +IEAELE+A+FEAG I + N+G LQKIGWSRA RTDKGVHAA Q++ KLHV G DI + +N LP IRV ++ T+ FNAK C +R Y Y PTF+ A A +E + KG A AQ + D ++ LE K +R+S + ++ L TLK Y+GTH FHNF+ +M + +R+I+ E P V + +EW + VVGQ+FLLH IRKM+ A++I G P+ IE A + + LP APS GL+L +A FE YN + +A S+ S + K+ P+++ A V+ FK + I HI K E +T + KWL Sbjct: 35 RAERSDAVHPGSYAAQRQRQHPTDAADKPALSLPTKRRYGLWVAFCGKNYSGMQMNEGVKTIEAELERALFEAGGIAESNYGFLQKIGWSRAARTDKGVHAAGQLLTAKLHV-----------------------------------------------------GEDADIPAFV---------------------------------------------------------GKVNAALPEDIRVMHMVTVTKNFNAKMTCDQRTYEYLAPTFIFAKRARAAAIKESEKTEEKGDA-----ATAQWPSDLR--------------------------------------------------------------------------------------DSEEGFDDNVVIDNTTLEAHKAFRLSDETLEKLNATLKEYVGTHNFHNFTSKMEPTNPQAKRFIISFEAERPFVQND--------------MEWVRLRVVGQSFLLHHIRKMIGTAVEIVSGVTDPSTIERAMQLTKMDLPKAPSVGLYLAQAHFEVYN-----LKMAESI---QTSHPPLDLKE-PAVAAA-----VELFKRDFIFDHIMKHEERTRTYAKWL 426 The following BLAST results are available for this feature:
BLAST of NO19G01410 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO19G01410 ID=NO19G01410|Name=NO19G01410|organism=Nannochloropsis oceanica|type=gene|length=2775bpback to top protein sequence of NO19G01410.1 >NO19G01410.1-protein ID=NO19G01410.1-protein|Name=NO19G01410.1|organism=Nannochloropsis oceanica|type=polypeptide|length=746bpback to top Synonyms
Publications
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