NO19G01380, NO19G01380 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO19G01380 vs. NCBI_GenBank
Match: XP_017552503.1 (PREDICTED: EKC/KEOPS complex subunit TPRKB [Pygocentrus nattereri]) HSP 1 Score: 75.9 bits (185), Expect = 2.100e-10 Identity = 43/91 (47.25%), Postives = 63/91 (69.23%), Query Frame = 0 Query: 40 LFPQNHTLHILLYEDVVNASEIRTALLDGTLPEFALIKPSMVLSSFHILLAASTALLQLAQGTMRLKTLHAELLYSLSPTTNISEAFRVFG 131 LFP+ H++ LL+ DV N +E+R ++G +P ALI PSMVL F L AA+ A+ G M+ ++L++E+++SLSPT NISEAF+ FG Sbjct: 9 LFPE-HSVTQLLFSDVRNCAELRKMAVEGQIPG-ALINPSMVLDPFQTLAAANKAVHLQKNGKMKTRSLYSEIIFSLSPTNNISEAFKRFG 97
BLAST of NO19G01380 vs. NCBI_GenBank
Match: EJW85547.1 (hypothetical protein WUBG_03543 [Wuchereria bancrofti]) HSP 1 Score: 75.5 bits (184), Expect = 2.700e-10 Identity = 42/88 (47.73%), Postives = 58/88 (65.91%), Query Frame = 0 Query: 43 QNHTLHILLYEDVVNASEIRTALLDGTLPEFALIKPSMVLSSFHILLAASTALLQLAQGTMRLKTLHAELLYSLSPTTNISEAFRVFG 131 Q + L+ DV NASE++ AL+DG++ + ALIKP +VL F +L AA+ A+ Q A + +TLHAEL+YSLSP NI E+ FG Sbjct: 20 QRRFFRVCLFTDVKNASELKQALIDGSI-DAALIKPELVLEVFTLLAAANKAVHQAAHNRLSTRTLHAELIYSLSPDRNILESLLTFG 106
BLAST of NO19G01380 vs. NCBI_GenBank
Match: XP_004084365.1 (EKC/KEOPS complex subunit TPRKB [Oryzias latipes]) HSP 1 Score: 75.5 bits (184), Expect = 2.700e-10 Identity = 41/91 (45.05%), Postives = 65/91 (71.43%), Query Frame = 0 Query: 40 LFPQNHTLHILLYEDVVNASEIRTALLDGTLPEFALIKPSMVLSSFHILLAASTALLQLAQGTMRLKTLHAELLYSLSPTTNISEAFRVFG 131 LFP+ H +L++DV NA+E+R ++G + ALI P+M+LS F LLAA+ A+ + G M+ ++L++E++++LSPT NISEAF+ FG Sbjct: 9 LFPEQHVTQ-MLFKDVNNAAELRQDAVEGNI-HAALINPTMLLSPFQALLAANKAIHSQSIGKMKTRSLNSEIIFNLSPTNNISEAFKRFG 97
BLAST of NO19G01380 vs. NCBI_GenBank
Match: XP_013786264.1 (EKC/KEOPS complex subunit Tprkb-like [Limulus polyphemus]) HSP 1 Score: 75.5 bits (184), Expect = 2.700e-10 Identity = 49/156 (31.41%), Postives = 89/156 (57.05%), Query Frame = 0 Query: 49 ILLYEDVVNASEIRTALLDGTLPEFALIKPSMVLSSFHILLAASTALLQLAQGTMRLKTLHAELLYSLSPTTNISEAFRVFGXXXXXXXXXXXXXXXXXXAFIDSSKEAIREKIIPLVQGKAVAAEKVMAYLNARPLSKERIERFRKVFKIEEGKR 205 + L+ DV N+ E+R L++G+L + ++IKPS+VL +F +L+AA+ A+L QGT++ K +++E+LY+LSP+ NI+E+ + FG ID +K I +V+GK + + + + N + +KV+KI+E ++ Sbjct: 17 LTLFSDVTNSKELRQKLVEGSL-QCSIIKPSLVLDTFQLLVAANKAVLSQQQGTLKTKGIYSEILYNLSPSKNITESLKTFGIGENDTSILVLVLND-----IDGTKV---NSISSVVKGKLASLDTLNMHTNE--------QEIKKVYKIKEAEQ 155
BLAST of NO19G01380 vs. NCBI_GenBank
Match: XP_021419065.1 (EKC/KEOPS complex subunit TPRKB [Oncorhynchus mykiss] >CDQ85304.1 unnamed protein product [Oncorhynchus mykiss]) HSP 1 Score: 75.1 bits (183), Expect = 3.600e-10 Identity = 42/94 (44.68%), Postives = 68/94 (72.34%), Query Frame = 0 Query: 37 ETVLFPQNHTLHILLYEDVVNASEIRTALLDGTLPEFALIKPSMVLSSFHILLAASTALLQLAQGTMRLKTLHAELLYSLSPTTNISEAFRVFG 131 E LFP + T+ LL++DV NA+E+R ++G + ALI PSM+++ F +L+AA+ A+ + G M+ ++L++E++Y+LSPT NISEAF+ FG Sbjct: 6 ELELFP-DRTVTQLLFKDVKNAAELRKNAMEGKI-NGALINPSMIVNPFQVLVAANKAVHLHSTGKMKTRSLYSEIIYNLSPTNNISEAFKRFG 97
BLAST of NO19G01380 vs. NCBI_GenBank
Match: XP_016384513.1 (PREDICTED: EKC/KEOPS complex subunit Tprkb-like [Sinocyclocheilus rhinocerous]) HSP 1 Score: 75.1 bits (183), Expect = 3.600e-10 Identity = 42/91 (46.15%), Postives = 68/91 (74.73%), Query Frame = 0 Query: 40 LFPQNHTLHILLYEDVVNASEIRTALLDGTLPEFALIKPSMVLSSFHILLAASTALLQLAQGTMRLKTLHAELLYSLSPTTNISEAFRVFG 131 LFP+ +T+ LL++DV NA+E+R ++G + + ALI PSMV+ +F IL+AA+ A+ G M+ ++L++E++++LSPT NISEAF+ FG Sbjct: 9 LFPE-YTVTQLLFKDVKNATELRKMAVNGEI-KGALINPSMVVDAFQILVAANKAVHLHKSGKMKTRSLYSEIIFNLSPTNNISEAFKRFG 97
BLAST of NO19G01380 vs. NCBI_GenBank
Match: XP_016392021.1 (PREDICTED: EKC/KEOPS complex subunit Tprkb-like [Sinocyclocheilus rhinocerous]) HSP 1 Score: 75.1 bits (183), Expect = 3.600e-10 Identity = 42/91 (46.15%), Postives = 68/91 (74.73%), Query Frame = 0 Query: 40 LFPQNHTLHILLYEDVVNASEIRTALLDGTLPEFALIKPSMVLSSFHILLAASTALLQLAQGTMRLKTLHAELLYSLSPTTNISEAFRVFG 131 LFP+ +T+ LL++DV NA+E+R ++G + + ALI PS+V+ +F IL+AA+ A+ G M+ ++L++E++Y+LSPT NISEAF+ FG Sbjct: 9 LFPE-YTVIQLLFKDVKNATELRKMAVNGEI-KGALINPSLVVDAFQILVAANKAVHLHKNGKMKTRSLYSEIIYNLSPTNNISEAFKRFG 97
BLAST of NO19G01380 vs. NCBI_GenBank
Match: XP_020307729.1 (EKC/KEOPS complex subunit TPRKB [Oncorhynchus kisutch]) HSP 1 Score: 75.1 bits (183), Expect = 3.600e-10 Identity = 42/94 (44.68%), Postives = 68/94 (72.34%), Query Frame = 0 Query: 37 ETVLFPQNHTLHILLYEDVVNASEIRTALLDGTLPEFALIKPSMVLSSFHILLAASTALLQLAQGTMRLKTLHAELLYSLSPTTNISEAFRVFG 131 E LFP + T+ LL++DV NA+E+R ++G + ALI PSM+++ F +L+AA+ A+ + G M+ ++L++E++Y+LSPT NISEAF+ FG Sbjct: 6 ELELFP-DRTVTQLLFKDVKNAAELRKNAMEGKI-NGALINPSMIVNPFQVLVAANKAVHLHSTGKMKTRSLYSEIIYNLSPTNNISEAFKRFG 97
BLAST of NO19G01380 vs. NCBI_GenBank
Match: XP_023825314.1 (EKC/KEOPS complex subunit Tprkb [Salvelinus alpinus]) HSP 1 Score: 75.1 bits (183), Expect = 3.600e-10 Identity = 42/94 (44.68%), Postives = 68/94 (72.34%), Query Frame = 0 Query: 37 ETVLFPQNHTLHILLYEDVVNASEIRTALLDGTLPEFALIKPSMVLSSFHILLAASTALLQLAQGTMRLKTLHAELLYSLSPTTNISEAFRVFG 131 E LFP + T+ LL++DV NA+E+R ++G + ALI PSM+++ F +L+AA+ A+ + G M+ ++L++E++Y+LSPT NISEAF+ FG Sbjct: 6 ELELFP-DRTVTQLLFKDVKNAAELRKNAMEGKI-NGALINPSMIVNPFQVLVAANKAVHLHSAGKMKTRSLYSEIIYNLSPTNNISEAFKRFG 97
BLAST of NO19G01380 vs. NCBI_GenBank
Match: XP_024232610.1 (EKC/KEOPS complex subunit Tprkb-like [Oncorhynchus tshawytscha]) HSP 1 Score: 75.1 bits (183), Expect = 3.600e-10 Identity = 42/94 (44.68%), Postives = 68/94 (72.34%), Query Frame = 0 Query: 37 ETVLFPQNHTLHILLYEDVVNASEIRTALLDGTLPEFALIKPSMVLSSFHILLAASTALLQLAQGTMRLKTLHAELLYSLSPTTNISEAFRVFG 131 E LFP + T+ LL++DV NA+E+R ++G + ALI PSM+++ F +L+AA+ A+ + G M+ ++L++E++Y+LSPT NISEAF+ FG Sbjct: 21 ELELFP-DRTVTQLLFKDVKNAAELRKNAMEGKI-NGALINPSMIVNPFQVLVAANKAVHLHSTGKMKTRSLYSEIIYNLSPTNNISEAFKRFG 112 The following BLAST results are available for this feature:
BLAST of NO19G01380 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO19G01380 ID=NO19G01380|Name=NO19G01380|organism=Nannochloropsis oceanica|type=gene|length=1278bpback to top protein sequence of NO19G01380.1 >NO19G01380.1-protein ID=NO19G01380.1-protein|Name=NO19G01380.1|organism=Nannochloropsis oceanica|type=polypeptide|length=258bpback to top Synonyms
Publications
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